Articles | Volume 13, issue 19
https://doi.org/10.5194/bg-13-5587-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-13-5587-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
07 Oct 2016
Research article |
| 07 Oct 2016
MODIS vegetation products as proxies of photosynthetic potential along a gradient of meteorologically and biologically driven ecosystem productivity
Natalia Restrepo-Coupe
CORRESPONDING AUTHOR
Plant Functional Biology and Climate Change Cluster,
University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
Australia
Plant Functional Biology and Climate Change Cluster,
University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
Australia
Kevin Davies
Plant Functional Biology and Climate Change Cluster,
University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
Australia
School of Geosciences, University of Sydney, Sydney, NSW 2006,
Australia
James Cleverly
School of Life Sciences, University of Technology Sydney,
P.O. Box 123, Broadway, NSW 2007, Australia
Jason Beringer
School of Earth and Environment, The University of
Western Australia, Crawley, WA 6009, Australia
Derek Eamus
School of Life Sciences, University of Technology Sydney,
P.O. Box 123, Broadway, NSW 2007, Australia
Eva van Gorsel
CSIRO Oceans and Atmosphere, Forestry House, Building
002, Wilf Crane Crescent, Yarralumla, ACT 2601, Australia
Lindsay B. Hutley
Research Institute for the Environment and Livelihoods,
Charles Darwin University, Darwin, NT 0909, Australia
Wayne S. Meyer
Environment Institute, School of Biological Sciences,
University of Adelaide, Adelaide, SA 5005, Australia
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Eva van Gorsel, James Cleverly, Jason Beringer, Helen Cleugh, Derek Eamus, Lindsay B. Hutley, Peter Isaac, and Suzanne Prober
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Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gabriel Abramowitz, Martin G. De Kauwe, Bradley Evans, Vanessa Haverd, Longhui Li, Caitlin Moore, Youngryel Ryu, Simon Scheiter, Stanislaus J. Schymanski, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
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Eduardo Eiji Maeda, Xuanlong Ma, Fabien Hubert Wagner, Hyungjun Kim, Taikan Oki, Derek Eamus, and Alfredo Huete
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Ian D. McHugh, Jason Beringer, Shaun C. Cunningham, Patrick J. Baker, Timothy R. Cavagnaro, Ralph Mac Nally, and Ross M. Thompson
Biogeosciences, 14, 3027–3050, https://doi.org/10.5194/bg-14-3027-2017, https://doi.org/10.5194/bg-14-3027-2017, 2017
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Peter Isaac, James Cleverly, Ian McHugh, Eva van Gorsel, Cacilia Ewenz, and Jason Beringer
Biogeosciences, 14, 2903–2928, https://doi.org/10.5194/bg-14-2903-2017, https://doi.org/10.5194/bg-14-2903-2017, 2017
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Networks of flux towers present diverse challenges to data collectors, managers and users. For data collectors, the goal is to minimise the time spent producing usable data sets. For data managers, the challenge is making data available in a timely and broad manner. For data users, the quest is for consistency in data processing across sites and networks. The OzFlux data path was developed to address these disparate needs and serves as an example of intra- and inter-network integration.
Jason Beringer, Ian McHugh, Lindsay B. Hutley, Peter Isaac, and Natascha Kljun
Biogeosciences, 14, 1457–1460, https://doi.org/10.5194/bg-14-1457-2017, https://doi.org/10.5194/bg-14-1457-2017, 2017
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Standardised, quality-controlled and robust data from flux networks underpin the understanding of ecosystem processes and tools to manage our natural resources. The Dynamic INtegrated Gap-filling and partitioning for OzFlux (DINGO) system enables gap-filling and partitioning of fluxes and subsequently provides diagnostics and results. Quality data from robust systems like DINGO ensure the utility and uptake of flux data and facilitates synergies between flux, remote sensing and modelling.
Cassandra Denise Wilks Rogers and Jason Beringer
Biogeosciences, 14, 597–615, https://doi.org/10.5194/bg-14-597-2017, https://doi.org/10.5194/bg-14-597-2017, 2017
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Caitlin E. Moore, Jason Beringer, Bradley Evans, Lindsay B. Hutley, and Nigel J. Tapper
Biogeosciences, 14, 111–129, https://doi.org/10.5194/bg-14-111-2017, https://doi.org/10.5194/bg-14-111-2017, 2017
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Mila Bristow, Lindsay B. Hutley, Jason Beringer, Stephen J. Livesley, Andrew C. Edwards, and Stefan K. Arndt
Biogeosciences, 13, 6285–6303, https://doi.org/10.5194/bg-13-6285-2016, https://doi.org/10.5194/bg-13-6285-2016, 2016
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Eva van Gorsel, Sebastian Wolf, James Cleverly, Peter Isaac, Vanessa Haverd, Cäcilia Ewenz, Stefan Arndt, Jason Beringer, Víctor Resco de Dios, Bradley J. Evans, Anne Griebel, Lindsay B. Hutley, Trevor Keenan, Natascha Kljun, Craig Macfarlane, Wayne S. Meyer, Ian McHugh, Elise Pendall, Suzanne M. Prober, and Richard Silberstein
Biogeosciences, 13, 5947–5964, https://doi.org/10.5194/bg-13-5947-2016, https://doi.org/10.5194/bg-13-5947-2016, 2016
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Temperature extremes are expected to become more prevalent in the future and understanding ecosystem response is crucial. We synthesised measurements and model results to investigate the effect of a summer heat wave on carbon and water exchange across three biogeographic regions in southern Australia. Forests proved relatively resilient to short-term heat extremes but the response of woodlands indicates that the carbon sinks of large areas of Australia may not be sustainable in a future climate.
Jason Beringer, Lindsay B. Hutley, Ian McHugh, Stefan K. Arndt, David Campbell, Helen A. Cleugh, James Cleverly, Víctor Resco de Dios, Derek Eamus, Bradley Evans, Cacilia Ewenz, Peter Grace, Anne Griebel, Vanessa Haverd, Nina Hinko-Najera, Alfredo Huete, Peter Isaac, Kasturi Kanniah, Ray Leuning, Michael J. Liddell, Craig Macfarlane, Wayne Meyer, Caitlin Moore, Elise Pendall, Alison Phillips, Rebecca L. Phillips, Suzanne M. Prober, Natalia Restrepo-Coupe, Susanna Rutledge, Ivan Schroder, Richard Silberstein, Patricia Southall, Mei Sun Yee, Nigel J. Tapper, Eva van Gorsel, Camilla Vote, Jeff Walker, and Tim Wardlaw
Biogeosciences, 13, 5895–5916, https://doi.org/10.5194/bg-13-5895-2016, https://doi.org/10.5194/bg-13-5895-2016, 2016
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Caitlin E. Moore, Tim Brown, Trevor F. Keenan, Remko A. Duursma, Albert I. J. M. van Dijk, Jason Beringer, Darius Culvenor, Bradley Evans, Alfredo Huete, Lindsay B. Hutley, Stefan Maier, Natalia Restrepo-Coupe, Oliver Sonnentag, Alison Specht, Jeffrey R. Taylor, Eva van Gorsel, and Michael J. Liddell
Biogeosciences, 13, 5085–5102, https://doi.org/10.5194/bg-13-5085-2016, https://doi.org/10.5194/bg-13-5085-2016, 2016
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Australian vegetation phenology is highly variable due to the diversity of ecosystems on the continent. We explore continental-scale variability using satellite remote sensing by broadly classifying areas as seasonal, non-seasonal, or irregularly seasonal. We also examine ecosystem-scale phenology using phenocams and show that some broadly non-seasonal ecosystems do display phenological variability. Overall, phenocams are useful for understanding ecosystem-scale Australian vegetation phenology.
Yiying Chen, James Ryder, Vladislav Bastrikov, Matthew J. McGrath, Kim Naudts, Juliane Otto, Catherine Ottlé, Philippe Peylin, Jan Polcher, Aude Valade, Andrew Black, Jan A. Elbers, Eddy Moors, Thomas Foken, Eva van Gorsel, Vanessa Haverd, Bernard Heinesch, Frank Tiedemann, Alexander Knohl, Samuli Launiainen, Denis Loustau, Jérôme Ogée, Timo Vessala, and Sebastiaan Luyssaert
Geosci. Model Dev., 9, 2951–2972, https://doi.org/10.5194/gmd-9-2951-2016, https://doi.org/10.5194/gmd-9-2951-2016, 2016
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In this study, we compiled a set of within-canopy and above-canopy measurements of energy and water fluxes, and used these data to parametrize and validate the new multi-layer energy budget scheme for a range of forest types. An adequate parametrization approach has been presented for the global-scale land surface model (ORCHIDEE-CAN). Furthermore, model performance of the new multi-layer parametrization was compared against the existing single-layer scheme.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gab Abramowitz, Martin G. De Kauwe, Remko Duursma, Bradley Evans, Vanessa Haverd, Longhui Li, Youngryel Ryu, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 13, 3245–3265, https://doi.org/10.5194/bg-13-3245-2016, https://doi.org/10.5194/bg-13-3245-2016, 2016
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In this study we assess how well terrestrial biosphere models perform at predicting water and carbon cycling for savanna ecosystems. We apply our models to five savanna sites in Northern Australia and highlight key causes for model failure. Our assessment of model performance uses a novel benchmarking system that scores a model’s predictive ability based on how well it is utilizing its driving information. On average, we found the models as a group display only moderate levels of performance.
Georgia R. Koerber, Wayne S. Meyer, Qiaoqi SUN, Peter Cale, and Cacilia M. Ewenz
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-182, https://doi.org/10.5194/bg-2016-182, 2016
Revised manuscript not accepted
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A severe bushfire in January 2014 at the Calperum flux tower, operational since August 2010, provided variation in ecosystem respiration and leaf area index to estimate the heterotrophic soil respiration from the y-intercept and was 44 % of net ecosystem exchange of carbon dioxide in the year after the bushfire. Light response functions with a calculated assimilation from equalizing the soil temperature and water content in the night and day allowed incorporation of light suppressed autotrophic respiration.
Caitlin E. Moore, Jason Beringer, Bradley Evans, Lindsay B. Hutley, Ian McHugh, and Nigel J. Tapper
Biogeosciences, 13, 2387–2403, https://doi.org/10.5194/bg-13-2387-2016, https://doi.org/10.5194/bg-13-2387-2016, 2016
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Savannas cover 20 % of the global land surface and account for 25 % of global terrestrial carbon uptake. They support 20 % of the world’s human population and are one of the most important ecosystems on our planet. We evaluated the temporal partitioning of carbon between overstory and understory in Australian tropical savanna using eddy covariance. We found the understory contributed ~ 32 % to annual productivity, increasing to 40 % in the wet season, thus driving seasonality in carbon uptake.
V. Haverd, B. Smith, M. Raupach, P. Briggs, L. Nieradzik, J. Beringer, L. Hutley, C. M. Trudinger, and J. Cleverly
Biogeosciences, 13, 761–779, https://doi.org/10.5194/bg-13-761-2016, https://doi.org/10.5194/bg-13-761-2016, 2016
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We present a new approach for modelling coupled phenology and carbon allocation in savannas, and test it using data from the OzFlux network. Model behaviour emerges from complex feedbacks between the plant physiology and vegetation dynamics, in response to resource availability, and not from imposed hypotheses about the controls on tree-grass co-existence. Results indicate that resource limitation is a stronger determinant of tree cover than disturbance in Australian savannas.
D. Eamus, S. Zolfaghar, R. Villalobos-Vega, J. Cleverly, and A. Huete
Hydrol. Earth Syst. Sci., 19, 4229–4256, https://doi.org/10.5194/hess-19-4229-2015, https://doi.org/10.5194/hess-19-4229-2015, 2015
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In this review, we discuss a range of techniques, including remote sensing, for identifying groundwater-dependent ecosystems and determining rates of water use by GDEs. In addition, gravity recovery satellite data are discussed in relation to changes in soil and groundwater stores. Ecophysiological and structural attributes of GDEs are reviewed, from which we present an integrated ecosystem-scale response as a function of differences in depth-to-groundwater.
Q. Sun, W. S. Meyer, G. R. Koerber, and P. Marschner
Biogeosciences, 12, 5093–5101, https://doi.org/10.5194/bg-12-5093-2015, https://doi.org/10.5194/bg-12-5093-2015, 2015
C. Werner, K. Reiser, M. Dannenmann, L. B. Hutley, J. Jacobeit, and K. Butterbach-Bahl
Biogeosciences, 11, 6047–6065, https://doi.org/10.5194/bg-11-6047-2014, https://doi.org/10.5194/bg-11-6047-2014, 2014
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Atmospheric loss of N from savanna soil was dominated by N2 emissions (82-99% of total N loss to atmosphere). Nitric oxide emissions significantly contributed at 50% WFPS; high temperatures and N2O emissions were negligible. Based on a simple upscale approach we estimated annual loss of N to the atmosphere at 7.5kg yr-1. N2O emission was low for most samples, but high for a small subset of cores at 75% WFPS (due to short periods where such conditions occur this has little effect on totals).
M. Broich, A. Huete, M. G. Tulbure, X. Ma, Q. Xin, M. Paget, N. Restrepo-Coupe, K. Davies, R. Devadas, and A. Held
Biogeosciences, 11, 5181–5198, https://doi.org/10.5194/bg-11-5181-2014, https://doi.org/10.5194/bg-11-5181-2014, 2014
H. Jamali, S. J. Livesley, L. B. Hutley, B. Fest, and S. K. Arndt
Biogeosciences, 10, 2229–2240, https://doi.org/10.5194/bg-10-2229-2013, https://doi.org/10.5194/bg-10-2229-2013, 2013
Related subject area
Biogeophysics: Ecohydrology
Reviews and syntheses: A scoping review evaluating the potential application of ecohydrological models for northern peatland restoration
Drought and radiation explain fluctuations in Amazon rainforest greenness during the 2015–2016 drought
Inclusion of bedrock vadose zone in dynamic global vegetation models is key for simulating vegetation structure and function
The dynamics of marsh-channel slump blocks: an observational study using repeated drone imagery
Understanding the effects of revegetated shrubs on fluxes of energy, water, and gross primary productivity in a desert steppe ecosystem using the STEMMUS–SCOPE model
Imaging of the electrical activity in the root zone under limited-water-availability stress: a laboratory study for Vitis vinifera
Coordination of rooting, xylem, and stomatal strategies explains the response of conifer forest stands to multi-year drought in the southern Sierra Nevada of California
Historical variation in the normalized difference vegetation index compared with soil moisture in a taiga forest ecosystem in northeastern Siberia
A process-based model for quantifying the effects of canal blocking on water table and CO2 emissions in tropical peatlands
Continuous ground monitoring of vegetation optical depth and water content with GPS signals
Technical note: Common ambiguities in plant hydraulics
Consistent responses of vegetation gas exchange to elevated atmospheric CO2 emerge from heuristic and optimization models
Pioneer biocrust communities prevent soil erosion in temperate forests after disturbances
Modelling temporal variability of in situ soil water and vegetation isotopes reveals ecohydrological couplings in a riparian willow plot
Toward estimation of seasonal water dynamics of winter wheat from ground-based L-band radiometry: a concept study
Spatially varying relevance of hydrometeorological hazards for vegetation productivity extremes
Temporal dynamics of tree xylem water isotopes: in situ monitoring and modeling
Reviews and syntheses: Gaining insights into evapotranspiration partitioning with novel isotopic monitoring methods
What determines the sign of the evapotranspiration response to afforestation in European summer?
Predicting evapotranspiration from drone-based thermography – a method comparison in a tropical oil palm plantation
Patterns of plant rehydration and growth following pulses of soil moisture availability
Climatic traits on daily clearness and cloudiness indices
Estimates of tree root water uptake from soil moisture profile dynamics
Causes and consequences of pronounced variation in the isotope composition of plant xylem water
Risk of crop failure due to compound dry and hot extremes estimated with nested copulas
Canal blocking optimization in restoration of drained peatlands
Large-scale biospheric drought response intensifies linearly with drought duration in arid regions
Global biosphere–climate interaction: a causal appraisal of observations and models over multiple temporal scales
Examining the evidence for decoupling between photosynthesis and transpiration during heat extremes
Ideas and perspectives: Tracing terrestrial ecosystem water fluxes using hydrogen and oxygen stable isotopes – challenges and opportunities from an interdisciplinary perspective
Does predictability of fluxes vary between FLUXNET sites?
Community-specific hydraulic conductance potential of soil water decomposed for two Alpine grasslands by small-scale lysimetry
Ideas and perspectives: how coupled is the vegetation to the boundary layer?
Crop water stress maps for an entire growing season from visible and thermal UAV imagery
Proximate and ultimate controls on carbon and nutrient dynamics of small agricultural catchments
Transpiration in an oil palm landscape: effects of palm age
Does EO NDVI seasonal metrics capture variations in species composition and biomass due to grazing in semi-arid grassland savannas?
Assessing vegetation structure and ANPP dynamics in a grassland–shrubland Chihuahuan ecotone using NDVI–rainfall relationships
On the use of the post-closure methods uncertainty band to evaluate the performance of land surface models against eddy covariance flux data
Distribution and biophysical processes of beaded streams in Arctic permafrost landscapes
Continental-scale impacts of intra-seasonal rainfall variability on simulated ecosystem responses in Africa
Dew formation on the surface of biological soil crusts in central European sand ecosystems
Nonlinear controls on evapotranspiration in arctic coastal wetlands
Organic carbon efflux from a deciduous forest catchment in Korea
A simple ecohydrological model captures essentials of seasonal leaf dynamics in semi-arid tropical grasslands
Mariana P. Silva, Mark G. Healy, and Laurence Gill
Biogeosciences, 21, 3143–3163, https://doi.org/10.5194/bg-21-3143-2024, https://doi.org/10.5194/bg-21-3143-2024, 2024
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Peatland restoration combats climate change and protects ecosystem health in many northern regions. This review gathers data about models used on northern peatlands to further envision their application in the specific scenario of restoration. A total of 211 papers were included in the review: location trends for peatland modelling were catalogued, and key themes in model outputs were highlighted. Valuable context is provided for future efforts in modelling the peatland restoration process.
Yi Y. Liu, Albert I. J. M. van Dijk, Patrick Meir, and Tim R. McVicar
Biogeosciences, 21, 2273–2295, https://doi.org/10.5194/bg-21-2273-2024, https://doi.org/10.5194/bg-21-2273-2024, 2024
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Greenness of the Amazon forest fluctuated during the 2015–2016 drought, but no satisfactory explanation has been found. Based on water storage, temperature, and atmospheric moisture demand, we developed a method to delineate the regions where forests were under stress. These drought-affected regions were mainly identified at the beginning and end of the drought, resulting in below-average greenness. For the months in between, without stress, greenness responded positively to intense sunlight.
Dana A. Lapides, W. Jesse Hahm, Matthew Forrest, Daniella M. Rempe, Thomas Hickler, and David N. Dralle
Biogeosciences, 21, 1801–1826, https://doi.org/10.5194/bg-21-1801-2024, https://doi.org/10.5194/bg-21-1801-2024, 2024
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Water stored in weathered bedrock is rarely incorporated into vegetation and Earth system models despite increasing recognition of its importance. Here, we add a weathered bedrock component to a widely used vegetation model. Using a case study of two sites in California and model runs across the United States, we show that more accurately representing subsurface water storage and hydrology increases summer plant water use so that it better matches patterns in distributed data products.
Zhicheng Yang, Clark Alexander, and Merryl Alber
Biogeosciences, 21, 1757–1772, https://doi.org/10.5194/bg-21-1757-2024, https://doi.org/10.5194/bg-21-1757-2024, 2024
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We used repeat UAV imagery to study the spatial and temporal dynamics of slump blocks in a Georgia salt marsh. Although slump blocks are common in marshes, tracking them with the UAV provided novel insights. Blocks are highly dynamic, with new blocks appearing in each image while some are lost. Most blocks were lost by submergence, but we report for the first time their reconnection to the marsh platform. We also found that slump blocks can be an important contributor to creek widening.
Enting Tang, Yijian Zeng, Yunfei Wang, Zengjing Song, Danyang Yu, Hongyue Wu, Chenglong Qiao, Christiaan van der Tol, Lingtong Du, and Zhongbo Su
Biogeosciences, 21, 893–909, https://doi.org/10.5194/bg-21-893-2024, https://doi.org/10.5194/bg-21-893-2024, 2024
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Our study shows that planting shrubs in a semiarid grassland reduced the soil moisture and increased plant water uptake and transpiration. Notably, the water used by the ecosystem exceeded the rainfall received during the growing seasons, indicating an imbalance in the water cycle. The findings demonstrate the effectiveness of the STEMMUS–SCOPE model as a tool to represent ecohydrological processes and highlight the need to consider energy and water budgets for future revegetation projects.
Benjamin Mary, Veronika Iván, Franco Meggio, Luca Peruzzo, Guillaume Blanchy, Chunwei Chou, Benedetto Ruperti, Yuxin Wu, and Giorgio Cassiani
Biogeosciences, 20, 4625–4650, https://doi.org/10.5194/bg-20-4625-2023, https://doi.org/10.5194/bg-20-4625-2023, 2023
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The study explores the partial root zone drying method, an irrigation strategy aimed at improving water use efficiency. We imaged the root–soil interaction using non-destructive techniques consisting of soil and plant current stimulation. The study found that imaging the processes in time was effective in identifying spatial patterns associated with irrigation and root water uptake. The results will be useful for developing more efficient root detection methods in natural soil conditions.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
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We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Aleksandr Nogovitcyn, Ruslan Shakhmatov, Tomoki Morozumi, Shunsuke Tei, Yumiko Miyamoto, Nagai Shin, Trofim C. Maximov, and Atsuko Sugimoto
Biogeosciences, 20, 3185–3201, https://doi.org/10.5194/bg-20-3185-2023, https://doi.org/10.5194/bg-20-3185-2023, 2023
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The taiga ecosystem in northeastern Siberia changed during the extreme wet event in 2007. Before the wet event, the NDVI in a typical larch forest showed a positive correlation with soil moisture, and after the event it showed a negative correlation. For both periods, NDVI correlated negatively with foliar C/N. These results indicate that high soil moisture availability after the event decreased needle production, which may have resulted from lower N availability.
Iñaki Urzainki, Marjo Palviainen, Hannu Hökkä, Sebastian Persch, Jeffrey Chatellier, Ophelia Wang, Prasetya Mahardhitama, Rizaldy Yudhista, and Annamari Laurén
Biogeosciences, 20, 2099–2116, https://doi.org/10.5194/bg-20-2099-2023, https://doi.org/10.5194/bg-20-2099-2023, 2023
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Drained peatlands (peat areas where ditches have been excavated to enhance crop productivity) are one of the main sources of carbon dioxide emissions globally. Blocking the ditches by building dams is a common strategy to raise the water table and to mitigate carbon dioxide emissions. But how effective is ditch blocking in raising the overall water table over a large area? Our work tackles this question by making use of the available data and physics-based hydrological modeling.
Vincent Humphrey and Christian Frankenberg
Biogeosciences, 20, 1789–1811, https://doi.org/10.5194/bg-20-1789-2023, https://doi.org/10.5194/bg-20-1789-2023, 2023
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Microwave satellites can be used to monitor how vegetation biomass changes over time or how droughts affect the world's forests. However, such satellite data are still difficult to validate and interpret because of a lack of comparable field observations. Here, we present a remote sensing technique that uses the Global Navigation Satellite System (GNSS) as a makeshift radar, making it possible to observe canopy transmissivity at any existing environmental research site in a cost-efficient way.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 4705–4714, https://doi.org/10.5194/bg-19-4705-2022, https://doi.org/10.5194/bg-19-4705-2022, 2022
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Plant hydraulics is often misrepresented in topical research. We highlight the commonly seen ambiguities and/or mistakes, with equations and figures to help visualize the potential biases. We recommend careful thinking when using or modifying existing plant hydraulic terms, methods, and models.
Stefano Manzoni, Simone Fatichi, Xue Feng, Gabriel G. Katul, Danielle Way, and Giulia Vico
Biogeosciences, 19, 4387–4414, https://doi.org/10.5194/bg-19-4387-2022, https://doi.org/10.5194/bg-19-4387-2022, 2022
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Increasing atmospheric carbon dioxide (CO2) causes leaves to close their stomata (through which water evaporates) but also promotes leaf growth. Even if individual leaves save water, how much will be consumed by a whole plant with possibly more leaves? Using different mathematical models, we show that plant stands that are not very dense and can grow more leaves will benefit from higher CO2 by photosynthesizing more while adjusting their stomata to consume similar amounts of water.
Corinna Gall, Martin Nebel, Dietmar Quandt, Thomas Scholten, and Steffen Seitz
Biogeosciences, 19, 3225–3245, https://doi.org/10.5194/bg-19-3225-2022, https://doi.org/10.5194/bg-19-3225-2022, 2022
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Soil erosion is one of the most serious environmental challenges of our time, which also applies to forests when forest soil is disturbed. Biological soil crusts (biocrusts) can play a key role as erosion control. In this study, we combined soil erosion measurements with vegetation surveys in disturbed forest areas. We found that soil erosion was reduced primarily by pioneer bryophyte-dominated biocrusts and that bryophytes contributed more to soil erosion mitigation than vascular plants.
Aaron Smith, Doerthe Tetzlaff, Jessica Landgraf, Maren Dubbert, and Chris Soulsby
Biogeosciences, 19, 2465–2485, https://doi.org/10.5194/bg-19-2465-2022, https://doi.org/10.5194/bg-19-2465-2022, 2022
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This research utilizes high-spatiotemporal-resolution soil and vegetation measurements, including water stable isotopes, within an ecohydrological model to partition water flux dynamics and identify flow paths and durations. Results showed high vegetation water use and high spatiotemporal dynamics of vegetation water source and vegetation isotopes. The evaluation of these dynamics further revealed relatively fast flow paths through both shallow soil and vegetation.
Thomas Jagdhuber, François Jonard, Anke Fluhrer, David Chaparro, Martin J. Baur, Thomas Meyer, and María Piles
Biogeosciences, 19, 2273–2294, https://doi.org/10.5194/bg-19-2273-2022, https://doi.org/10.5194/bg-19-2273-2022, 2022
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This is a concept study of water dynamics across winter wheat starting from ground-based L-band radiometry in combination with on-site measurements of soil and atmosphere. We research the feasibility of estimating water potentials and seasonal flux rates of water (water uptake from soil and transpiration rates into the atmosphere) within the soil-plant-atmosphere system (SPAS) of a winter wheat field. The main finding is that L-band radiometry can be integrated into field-based SPAS assessment.
Josephin Kroll, Jasper M. C. Denissen, Mirco Migliavacca, Wantong Li, Anke Hildebrandt, and Rene Orth
Biogeosciences, 19, 477–489, https://doi.org/10.5194/bg-19-477-2022, https://doi.org/10.5194/bg-19-477-2022, 2022
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Plant growth relies on having access to energy (solar radiation) and water (soil moisture). This energy and water availability is impacted by weather extremes, like heat waves and droughts, which will occur more frequently in response to climate change. In this context, we analysed global satellite data to detect in which regions extreme plant growth is controlled by energy or water. We find that extreme plant growth is associated with temperature- or soil-moisture-related extremes.
Stefan Seeger and Markus Weiler
Biogeosciences, 18, 4603–4627, https://doi.org/10.5194/bg-18-4603-2021, https://doi.org/10.5194/bg-18-4603-2021, 2021
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We developed a setup for fully automated in situ measurements of stable water isotopes in soil and the stems of fully grown trees. We used this setup in a 12-week field campaign to monitor the propagation of a labelling pulse from the soil up to a stem height of 8 m.
We could observe trees shifting their main water uptake depths multiple times, depending on water availability.
The gained knowledge about the temporal dynamics can help to improve water uptake models and future study designs.
Youri Rothfuss, Maria Quade, Nicolas Brüggemann, Alexander Graf, Harry Vereecken, and Maren Dubbert
Biogeosciences, 18, 3701–3732, https://doi.org/10.5194/bg-18-3701-2021, https://doi.org/10.5194/bg-18-3701-2021, 2021
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The partitioning of evapotranspiration into evaporation from soil and transpiration from plants is crucial for a wide range of parties, from farmers to policymakers. In this work, we focus on a particular partitioning method, based on the stable isotopic analysis of water. In particular, we aim at highlighting the challenges that this method is currently facing and, in light of recent methodological developments, propose ways forward for the isotopic-partitioning community.
Marcus Breil, Edouard L. Davin, and Diana Rechid
Biogeosciences, 18, 1499–1510, https://doi.org/10.5194/bg-18-1499-2021, https://doi.org/10.5194/bg-18-1499-2021, 2021
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The physical processes behind varying evapotranspiration rates in forests and grasslands in Europe are investigated in a regional model study with idealized afforestation scenarios. The results show that the evapotranspiration response to afforestation depends on the interplay of two counteracting factors: the transpiration facilitating characteristics of a forest and the reduced saturation deficits of forests caused by an increased surface roughness and associated lower surface temperatures.
Florian Ellsäßer, Christian Stiegler, Alexander Röll, Tania June, Hendrayanto, Alexander Knohl, and Dirk Hölscher
Biogeosciences, 18, 861–872, https://doi.org/10.5194/bg-18-861-2021, https://doi.org/10.5194/bg-18-861-2021, 2021
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Recording land surface temperatures using drones offers new options to predict evapotranspiration based on energy balance models. This study compares predictions from three energy balance models with the eddy covariance method. A model II Deming regression indicates interchangeability for latent heat flux estimates from certain modeling methods and eddy covariance measurements. This complements the available methods for evapotranspiration studies by fine grain and spatially explicit assessments.
Andrew F. Feldman, Daniel J. Short Gianotti, Alexandra G. Konings, Pierre Gentine, and Dara Entekhabi
Biogeosciences, 18, 831–847, https://doi.org/10.5194/bg-18-831-2021, https://doi.org/10.5194/bg-18-831-2021, 2021
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We quantify global plant water uptake durations after rainfall using satellite-based plant water content measurements. In wetter regions, plant water uptake occurs within a day due to rapid coupling between soil and plant water content. Drylands show multi-day plant water uptake after rain pulses, providing widespread evidence for slow rehydration responses and pulse-driven growth responses. Our results suggest that drylands are sensitive to projected shifts in rainfall intensity and frequency.
Estefanía Muñoz and Andrés Ochoa
Biogeosciences, 18, 573–584, https://doi.org/10.5194/bg-18-573-2021, https://doi.org/10.5194/bg-18-573-2021, 2021
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We inspect for climatic traits in the shape of the PDF of the clear-day (c) and the clearness (k) indices at 37 FLUXNET sites for the SW and the PAR spectral bands. We identified three types of PDF, unimodal with low dispersion, unimodal with high dispersion and bimodal, with no difference in the PDF type between c and k at each site. We found that latitude, global climate zone and Köppen climate type have a weak relation and the Holdridge life zone a stronger relation with c and k PDF types.
Conrad Jackisch, Samuel Knoblauch, Theresa Blume, Erwin Zehe, and Sibylle K. Hassler
Biogeosciences, 17, 5787–5808, https://doi.org/10.5194/bg-17-5787-2020, https://doi.org/10.5194/bg-17-5787-2020, 2020
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We developed software to calculate the root water uptake (RWU) of beech tree roots from soil moisture dynamics. We present our approach and compare RWU to measured sap flow in the tree stem. The study relates to two sites that are similar in topography and weather but with contrasting soils. While sap flow is very similar between the two sites, the RWU is different. This suggests that soil characteristics have substantial influence. Our easy-to-implement RWU estimate may help further studies.
Hannes P. T. De Deurwaerder, Marco D. Visser, Matteo Detto, Pascal Boeckx, Félicien Meunier, Kathrin Kuehnhammer, Ruth-Kristina Magh, John D. Marshall, Lixin Wang, Liangju Zhao, and Hans Verbeeck
Biogeosciences, 17, 4853–4870, https://doi.org/10.5194/bg-17-4853-2020, https://doi.org/10.5194/bg-17-4853-2020, 2020
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The depths at which plants take up water is challenging to observe directly. To do so, scientists have relied on measuring the isotopic composition of xylem water as this provides information on the water’s source. Our work shows that this isotopic composition changes throughout the day, which complicates the interpretation of the water’s source and has been currently overlooked. We build a model to help understand the origin of these composition changes and their consequences for science.
Andreia Filipa Silva Ribeiro, Ana Russo, Célia Marina Gouveia, Patrícia Páscoa, and Jakob Zscheischler
Biogeosciences, 17, 4815–4830, https://doi.org/10.5194/bg-17-4815-2020, https://doi.org/10.5194/bg-17-4815-2020, 2020
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This study investigates the impacts of compound dry and hot extremes on crop yields, namely wheat and barley, over two regions in Spain dominated by rainfed agriculture. We provide estimates of the conditional probability of crop loss under compound dry and hot conditions, which could be an important tool for responsible authorities to mitigate the impacts magnified by the interactions between the different hazards.
Iñaki Urzainki, Ari Laurén, Marjo Palviainen, Kersti Haahti, Arif Budiman, Imam Basuki, Michael Netzer, and Hannu Hökkä
Biogeosciences, 17, 4769–4784, https://doi.org/10.5194/bg-17-4769-2020, https://doi.org/10.5194/bg-17-4769-2020, 2020
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Drained peatlands (peat areas where ditches have been excavated to enhance plant production) are one of the main sources of carbon dioxide emissions globally. Blocking these ditches by building dams is a common strategy to restore the self-sustaining peat ecosystem and mitigate carbon dioxide emissions. Where should these dams be located in order to maximize the benefits? Our work tackles this question by making use of the available data, hydrological modeling and numerical optimization methods.
René Orth, Georgia Destouni, Martin Jung, and Markus Reichstein
Biogeosciences, 17, 2647–2656, https://doi.org/10.5194/bg-17-2647-2020, https://doi.org/10.5194/bg-17-2647-2020, 2020
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Drought duration is a key control of the large-scale biospheric drought response.
Thereby, the vegetation responds linearly to drought duration at large spatial scales.
The slope of the linear relationship between the vegetation drought response and drought duration is steeper in drier climates.
Jeroen Claessen, Annalisa Molini, Brecht Martens, Matteo Detto, Matthias Demuzere, and Diego G. Miralles
Biogeosciences, 16, 4851–4874, https://doi.org/10.5194/bg-16-4851-2019, https://doi.org/10.5194/bg-16-4851-2019, 2019
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Bidirectional interactions between vegetation and climate are unraveled over short (monthly) and long (inter-annual) temporal scales. Analyses use a novel causal inference method based on wavelet theory. The performance of climate models at representing these interactions is benchmarked against satellite data. Climate models can reproduce the overall climate controls on vegetation at all temporal scales, while their performance at representing biophysical feedbacks on climate is less adequate.
Martin G. De Kauwe, Belinda E. Medlyn, Andrew J. Pitman, John E. Drake, Anna Ukkola, Anne Griebel, Elise Pendall, Suzanne Prober, and Michael Roderick
Biogeosciences, 16, 903–916, https://doi.org/10.5194/bg-16-903-2019, https://doi.org/10.5194/bg-16-903-2019, 2019
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Recent experimental evidence suggests that during heat extremes, trees may reduce photosynthesis to near zero but increase transpiration. Using eddy covariance data and examining the 3 days leading up to a temperature extreme, we found evidence of reduced photosynthesis and sustained or increased latent heat fluxes at Australian wooded flux sites. However, when focusing on heatwaves, we were unable to disentangle photosynthetic decoupling from the effect of increasing vapour pressure deficit.
Daniele Penna, Luisa Hopp, Francesca Scandellari, Scott T. Allen, Paolo Benettin, Matthias Beyer, Josie Geris, Julian Klaus, John D. Marshall, Luitgard Schwendenmann, Till H. M. Volkmann, Jana von Freyberg, Anam Amin, Natalie Ceperley, Michael Engel, Jay Frentress, Yamuna Giambastiani, Jeff J. McDonnell, Giulia Zuecco, Pilar Llorens, Rolf T. W. Siegwolf, Todd E. Dawson, and James W. Kirchner
Biogeosciences, 15, 6399–6415, https://doi.org/10.5194/bg-15-6399-2018, https://doi.org/10.5194/bg-15-6399-2018, 2018
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Understanding how water flows through ecosystems is needed to provide society and policymakers with the scientific background to manage water resources sustainably. Stable isotopes of hydrogen and oxygen in water are a powerful tool for tracking water fluxes, although the heterogeneity of natural systems and practical methodological issues still limit their full application. Here, we examine the challenges in this research field and highlight new perspectives based on interdisciplinary research.
Ned Haughton, Gab Abramowitz, Martin G. De Kauwe, and Andy J. Pitman
Biogeosciences, 15, 4495–4513, https://doi.org/10.5194/bg-15-4495-2018, https://doi.org/10.5194/bg-15-4495-2018, 2018
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This project explores predictability in energy, water, and carbon fluxes in the free-use Tier 1 of the FLUXNET 2015 dataset using a uniqueness metric based on comparison of locally and globally trained models. While there is broad spread in predictability between sites, we found strikingly few strong patterns. Nevertheless, these results can contribute to the standardisation of site selection for land surface model evaluation and help pinpoint regions that are ripe for further FLUXNET research.
Georg Frenck, Georg Leitinger, Nikolaus Obojes, Magdalena Hofmann, Christian Newesely, Mario Deutschmann, Ulrike Tappeiner, and Erich Tasser
Biogeosciences, 15, 1065–1078, https://doi.org/10.5194/bg-15-1065-2018, https://doi.org/10.5194/bg-15-1065-2018, 2018
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For central Europe in addition to rising temperatures, an increasing variability in precipitation is predicted. In a replicated mesocosm experiment we compared evapotranspiration and the biomass productivity of two differently drought-adapted vegetation communities during two irrigation regimes (with and without drought periods). Significant differences between the different communities were found in the response to variations in the water supply and biomass production.
Martin G. De Kauwe, Belinda E. Medlyn, Jürgen Knauer, and Christopher A. Williams
Biogeosciences, 14, 4435–4453, https://doi.org/10.5194/bg-14-4435-2017, https://doi.org/10.5194/bg-14-4435-2017, 2017
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Understanding the sensitivity of transpiration to stomatal conductance is critical to simulating the water cycle. This sensitivity is a function of the degree of coupling between the vegetation and the atmosphere. We combined an extensive literature summary with estimates of coupling derived from FLUXNET data. We found notable departures from the values previously reported. These data form a model benchmarking metric to test existing coupling assumptions.
Helene Hoffmann, Rasmus Jensen, Anton Thomsen, Hector Nieto, Jesper Rasmussen, and Thomas Friborg
Biogeosciences, 13, 6545–6563, https://doi.org/10.5194/bg-13-6545-2016, https://doi.org/10.5194/bg-13-6545-2016, 2016
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This study investigates whether the UAV (drone) based WDI can determine crop water stress from fields with open canopies (land surface consisting of both soil and canopy) and from fields where canopies are starting to senesce. This utility could solve issues that arise when applying the commonly used CWSI stress index. The WDI succeeded in providing accurate, high-resolution estimates of crop water stress at different growth stages of barley.
Zahra Thomas, Benjamin W. Abbott, Olivier Troccaz, Jacques Baudry, and Gilles Pinay
Biogeosciences, 13, 1863–1875, https://doi.org/10.5194/bg-13-1863-2016, https://doi.org/10.5194/bg-13-1863-2016, 2016
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Direct human impact on a catchment (fertilizer input, soil disturbance, urbanization) is asymmetrically linked with inherent catchment properties (geology, soil, topography), which together determine catchment vulnerability to human activity. To quantify the influence of physical, hydrologic, and anthropogenic controls on surface water quality, we used a 5-year high-frequency water chemistry data set from three contrasting headwater catchments in western France.
A. Röll, F. Niu, A. Meijide, A. Hardanto, Hendrayanto, A. Knohl, and D. Hölscher
Biogeosciences, 12, 5619–5633, https://doi.org/10.5194/bg-12-5619-2015, https://doi.org/10.5194/bg-12-5619-2015, 2015
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The study provides first insight into eco-hydrological consequences of the continuing oil palm expansion in the tropics. Stand transpiration rates of some studied oil palm stands compared to or even exceeded values reported for tropical forests, indicating high water use of oil palms under certain conditions. Oil palm landscapes show some spatial variations in (evapo)transpiration rates, e.g. due to varying plantation age, but the day-to-day variability of oil palm transpiration is rather low.
J. L. Olsen, S. Miehe, P. Ceccato, and R. Fensholt
Biogeosciences, 12, 4407–4419, https://doi.org/10.5194/bg-12-4407-2015, https://doi.org/10.5194/bg-12-4407-2015, 2015
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Limitations of satellite-based normalized difference vegetation index (NDVI) for monitoring vegetation trends are investigated using observations from the Widou Thiengoly test site in northern Senegal. NDVI do not reflect the large differences found in biomass production and species composition between grazed and ungrazed plots. This is problematic for vegetation trend analysis in the context of drastically increasing numbers of Sahelian livestock in recent decades.
M. Moreno-de las Heras, R. Díaz-Sierra, L. Turnbull, and J. Wainwright
Biogeosciences, 12, 2907–2925, https://doi.org/10.5194/bg-12-2907-2015, https://doi.org/10.5194/bg-12-2907-2015, 2015
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Exploration of NDVI-rainfall relationships provided ready biophysically based criteria to study the spatial distribution and dynamics of ANPP for herbaceous and shrub vegetation across a grassland-shrubland Chihuahuan ecotone (Sevilleta NWR, New Mexico). Overall our results suggest that shrub encroachment has not been particularly active for 2000-2013 in the area, although future reductions in summer precipitation and/or increases in winter rainfall may intensify the shrub-encroachment process.
J. Ingwersen, K. Imukova, P. Högy, and T. Streck
Biogeosciences, 12, 2311–2326, https://doi.org/10.5194/bg-12-2311-2015, https://doi.org/10.5194/bg-12-2311-2015, 2015
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The energy balance of eddy covariance (EC) flux data is normally not closed. Therefore, EC flux data are usually post-closed, i.e. the measured turbulent fluxes are adjusted so as to close the energy balance. We propose to use in model evaluation the post-closure method uncertainty band (PUB) to account for the uncertainty in EC data originating from lacking energy balance closure. Working with only a single post-closing method might result in severe misinterpretations in model-data comparison.
C. D. Arp, M. S. Whitman, B. M. Jones, G. Grosse, B. V. Gaglioti, and K. C. Heim
Biogeosciences, 12, 29–47, https://doi.org/10.5194/bg-12-29-2015, https://doi.org/10.5194/bg-12-29-2015, 2015
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Beaded streams have deep elliptical pools connected by narrow runs that we show are common landforms in the continuous permafrost zone. These fluvial systems often initiate from lakes and occur predictably in headwater portions of moderately sloping watersheds. Snow capture along stream courses reduces ice thickness allowing thawed sediment to persist under most pools. Interpool thermal variability and hydrologic regimes provide important aquatic habitat and connectivity in Arctic landscapes.
K. Guan, S. P. Good, K. K. Caylor, H. Sato, E. F. Wood, and H. Li
Biogeosciences, 11, 6939–6954, https://doi.org/10.5194/bg-11-6939-2014, https://doi.org/10.5194/bg-11-6939-2014, 2014
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Climate change is expected to modify the way that rainfall arrives, namely the frequency and intensity of rainfall events and rainy season length. Yet, the quantification of the impact of these possible rainfall changes across large biomes is lacking. Our study fills this gap by developing a new modeling framework, applying it to continental Africa. We show that African ecosystems are highly sensitive to these rainfall variabilities, with esp. large sensitivity to changes in rainy season length.
T. Fischer, M. Veste, O. Bens, and R. F. Hüttl
Biogeosciences, 9, 4621–4628, https://doi.org/10.5194/bg-9-4621-2012, https://doi.org/10.5194/bg-9-4621-2012, 2012
A. K. Liljedahl, L. D. Hinzman, Y. Harazono, D. Zona, C. E. Tweedie, R. D. Hollister, R. Engstrom, and W. C. Oechel
Biogeosciences, 8, 3375–3389, https://doi.org/10.5194/bg-8-3375-2011, https://doi.org/10.5194/bg-8-3375-2011, 2011
S. J. Kim, J. Kim, and K. Kim
Biogeosciences, 7, 1323–1334, https://doi.org/10.5194/bg-7-1323-2010, https://doi.org/10.5194/bg-7-1323-2010, 2010
P. Choler, W. Sea, P. Briggs, M. Raupach, and R. Leuning
Biogeosciences, 7, 907–920, https://doi.org/10.5194/bg-7-907-2010, https://doi.org/10.5194/bg-7-907-2010, 2010
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Short summary
We re-evaluated the connection between satellite greenness products and C-flux tower data in four Australian ecosystems. We identify key mechanisms driving the carbon cycle, and provide an ecological basis for the interpretation of vegetation indices. We found relationships between productivity and greenness to be non-significant in meteorologically driven evergreen forests and sites where climate and vegetation phenology were asynchronous, and highly correlated in phenology-driven ecosystems.
We re-evaluated the connection between satellite greenness products and C-flux tower data in...
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