Articles | Volume 10, issue 11
https://doi.org/10.5194/bg-10-7703-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-10-7703-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
28 Nov 2013
Research article |
| 28 Nov 2013
Modelling changes in nitrogen cycling to sustain increases in forest productivity under elevated atmospheric CO2 and contrasting site conditions
R. F. Grant
Department of Renewable Resources, University of Alberta, Edmonton, AB T6G 2E3, Canada
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Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, and Scott R. Saleska
Biogeosciences, 17, 5849–5860, https://doi.org/10.5194/bg-17-5849-2020, https://doi.org/10.5194/bg-17-5849-2020, 2020
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Methane (CH4) is a strong greenhouse gas that can accelerate climate change and offset mitigation efforts. A key assumption embedded in many large-scale climate models is that ecosystem CH4 emissions can be estimated by fixed temperature relations. Here, we demonstrate that CH4 emissions cannot be parameterized by emergent temperature response alone due to variability driven by microbial and abiotic interactions. We also provide mechanistic understanding for observed CH4 emission hysteresis.
Robert F. Grant, Sisi Lin, and Guillermo Hernandez-Ramirez
Biogeosciences, 17, 2021–2039, https://doi.org/10.5194/bg-17-2021-2020, https://doi.org/10.5194/bg-17-2021-2020, 2020
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Nitrification inhibitors (NI) have been shown to reduce emissions of nitrous oxide (N20), a potent greenhouse gas, from fertilizer and manure applied to agricultural fields. However difficulties in measuring N20 emissions limit our ability to estimate these reductions. Here we propose and test a mathematical model that may allow us to estimate these reductions under diverse site conditions. These estimates will be useful in determining emission factors for NI-amended fertilizer and manure.
Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, Virginia I. Rich, and Scott R. Saleska
The Cryosphere, 13, 647–663, https://doi.org/10.5194/tc-13-647-2019, https://doi.org/10.5194/tc-13-647-2019, 2019
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Permafrost peatlands store large amounts of carbon potentially vulnerable to decomposition under changing climate. We estimated effects of climate forcing biases on carbon cycling at a thawing permafrost peatland in subarctic Sweden. Our results indicate that many climate reanalysis products are cold and wet biased in our study region, leading to erroneous active layer depth and carbon budget estimates. Future studies should recognize the effects of climate forcing uncertainty on carbon cycling.
Mohammad Mezbahuddin, Robert F. Grant, and Lawrence B. Flanagan
Biogeosciences, 14, 5507–5531, https://doi.org/10.5194/bg-14-5507-2017, https://doi.org/10.5194/bg-14-5507-2017, 2017
Robert F. Grant, Albrecht Neftel, and Pierluigi Calanca
Biogeosciences, 13, 3549–3571, https://doi.org/10.5194/bg-13-3549-2016, https://doi.org/10.5194/bg-13-3549-2016, 2016
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The magnitude of N2O emissions from managed grasslands depends on weather and on harvesting and fertilizer practices. Modelling provides a means to predict these emissions under diverse weather and management types. In this modelling study, we show that N2O emissions depend on how weather affects temperatures and water contents of surface litter and near-surface soil. N2O emissions modelled from the grassland were increased by suboptimal harvesting practices, fertilizer timing and soil properties.
M. Mezbahuddin, R. F. Grant, and T. Hirano
Biogeosciences, 11, 577–599, https://doi.org/10.5194/bg-11-577-2014, https://doi.org/10.5194/bg-11-577-2014, 2014
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, and Scott R. Saleska
Biogeosciences, 17, 5849–5860, https://doi.org/10.5194/bg-17-5849-2020, https://doi.org/10.5194/bg-17-5849-2020, 2020
Short summary
Short summary
Methane (CH4) is a strong greenhouse gas that can accelerate climate change and offset mitigation efforts. A key assumption embedded in many large-scale climate models is that ecosystem CH4 emissions can be estimated by fixed temperature relations. Here, we demonstrate that CH4 emissions cannot be parameterized by emergent temperature response alone due to variability driven by microbial and abiotic interactions. We also provide mechanistic understanding for observed CH4 emission hysteresis.
Robert F. Grant, Sisi Lin, and Guillermo Hernandez-Ramirez
Biogeosciences, 17, 2021–2039, https://doi.org/10.5194/bg-17-2021-2020, https://doi.org/10.5194/bg-17-2021-2020, 2020
Short summary
Short summary
Nitrification inhibitors (NI) have been shown to reduce emissions of nitrous oxide (N20), a potent greenhouse gas, from fertilizer and manure applied to agricultural fields. However difficulties in measuring N20 emissions limit our ability to estimate these reductions. Here we propose and test a mathematical model that may allow us to estimate these reductions under diverse site conditions. These estimates will be useful in determining emission factors for NI-amended fertilizer and manure.
Kuang-Yu Chang, William J. Riley, Patrick M. Crill, Robert F. Grant, Virginia I. Rich, and Scott R. Saleska
The Cryosphere, 13, 647–663, https://doi.org/10.5194/tc-13-647-2019, https://doi.org/10.5194/tc-13-647-2019, 2019
Short summary
Short summary
Permafrost peatlands store large amounts of carbon potentially vulnerable to decomposition under changing climate. We estimated effects of climate forcing biases on carbon cycling at a thawing permafrost peatland in subarctic Sweden. Our results indicate that many climate reanalysis products are cold and wet biased in our study region, leading to erroneous active layer depth and carbon budget estimates. Future studies should recognize the effects of climate forcing uncertainty on carbon cycling.
Mohammad Mezbahuddin, Robert F. Grant, and Lawrence B. Flanagan
Biogeosciences, 14, 5507–5531, https://doi.org/10.5194/bg-14-5507-2017, https://doi.org/10.5194/bg-14-5507-2017, 2017
Robert F. Grant, Albrecht Neftel, and Pierluigi Calanca
Biogeosciences, 13, 3549–3571, https://doi.org/10.5194/bg-13-3549-2016, https://doi.org/10.5194/bg-13-3549-2016, 2016
Short summary
Short summary
The magnitude of N2O emissions from managed grasslands depends on weather and on harvesting and fertilizer practices. Modelling provides a means to predict these emissions under diverse weather and management types. In this modelling study, we show that N2O emissions depend on how weather affects temperatures and water contents of surface litter and near-surface soil. N2O emissions modelled from the grassland were increased by suboptimal harvesting practices, fertilizer timing and soil properties.
M. Mezbahuddin, R. F. Grant, and T. Hirano
Biogeosciences, 11, 577–599, https://doi.org/10.5194/bg-11-577-2014, https://doi.org/10.5194/bg-11-577-2014, 2014
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
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Ke Liu, Yujie Wang, Troy S. Magney, and Christian Frankenberg
Biogeosciences, 21, 1501–1516, https://doi.org/10.5194/bg-21-1501-2024, https://doi.org/10.5194/bg-21-1501-2024, 2024
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Xin Chen, Tiexi Chen, Xiaodong Li, Yuanfang Chai, Shengjie Zhou, Renjie Guo, and Jie Dai
EGUsphere, https://doi.org/10.5194/egusphere-2024-114, https://doi.org/10.5194/egusphere-2024-114, 2024
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Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billdesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Gharun Mana, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2024-165, https://doi.org/10.5194/egusphere-2024-165, 2024
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The movement of water, carbon, and energy from the earth surface to the atmosphere, or flux, is an important process to understand that impacts all of our lives. Here we outline a method to estimate global water and CO2 fluxes based on direct measurements from site around the world called FLUXCOM-X. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Bertrand Guenet, Jérémie Orliac, Lauric Cécillon, Olivier Torres, Laura Sereni, Philip A. Martin, Pierre Barré, and Laurent Bopp
Biogeosciences, 21, 657–669, https://doi.org/10.5194/bg-21-657-2024, https://doi.org/10.5194/bg-21-657-2024, 2024
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Heterotrophic respiration fluxes are a major flux between surfaces and the atmosphere, but Earth system models do not yet represent them correctly. Here we benchmarked Earth system models against observation-based products, and we identified the important mechanisms that need to be improved in the next-generation Earth system models.
Shuyue Li, Bonnie Waring, Jennifer Powers, and David Medvigy
Biogeosciences, 21, 455–471, https://doi.org/10.5194/bg-21-455-2024, https://doi.org/10.5194/bg-21-455-2024, 2024
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We used an ecosystem model to simulate primary production of a tropical forest subjected to 3 years of nutrient fertilization. Simulations parameterized such that relative allocation to fine roots increased with increasing soil phosphorus had leaf, wood, and fine root production consistent with observations. However, these simulations seemed to over-allocate to fine roots on multidecadal timescales, affecting aboveground biomass. Additional observations across timescales would benefit models.
Stephen Björn Wirth, Arne Poyda, Friedhelm Taube, Britta Tietjen, Christoph Müller, Kirsten Thonicke, Anja Linstädter, Kai Behn, Sibyll Schaphoff, Werner von Bloh, and Susanne Rolinski
Biogeosciences, 21, 381–410, https://doi.org/10.5194/bg-21-381-2024, https://doi.org/10.5194/bg-21-381-2024, 2024
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In dynamic global vegetation models (DGVMs), the role of functional diversity in forage supply and soil organic carbon storage of grasslands is not explicitly taken into account. We introduced functional diversity into the Lund Potsdam Jena managed Land (LPJmL) DGVM using CSR theory. The new model reproduced well-known trade-offs between plant traits and can be used to quantify the role of functional diversity in climate change mitigation using different functional diversity scenarios.
Joe R. McNorton and Francesca Di Giuseppe
Biogeosciences, 21, 279–300, https://doi.org/10.5194/bg-21-279-2024, https://doi.org/10.5194/bg-21-279-2024, 2024
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Wildfires have wide-ranging consequences for local communities, air quality and ecosystems. Vegetation amount and moisture state are key components to forecast wildfires. We developed a combined model and satellite framework to characterise vegetation, including the type of fuel, whether it is alive or dead, and its moisture content. The daily data is at high resolution globally (~9 km). Our characteristics correlate with active fire data and can inform fire danger and spread modelling efforts.
Reza Kusuma Nurrohman, Tomomichi Kato, Hideki Ninomiya, Lea Végh, Nicolas Delbart, Tatsuya Miyauchi, Hisashi Sato, Tomohiro Shiraishi, and Ryuichi Hirata
EGUsphere, https://doi.org/10.5194/egusphere-2024-105, https://doi.org/10.5194/egusphere-2024-105, 2024
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SPITFIRE fire module was integrated into SEIB Dynamic Global Vegetation Model to improve the model's accuracy in depicting forest fire frequency, intensity, and extent in Siberia. Projected fires showed a continuous increase in higher emissions of greenhouse gases and aerosols from 2023 to 2100 under all RCP scenarios. This study contributes to a better understanding of fire dynamics, land ecosystem-climate interactions, and global material cycles under the threat of escalating fires in Siberia.
Brooke A. Eastman, William R. Wieder, Melannie D. Hartman, Edward R. Brzostek, and William T. Peterjohn
Biogeosciences, 21, 201–221, https://doi.org/10.5194/bg-21-201-2024, https://doi.org/10.5194/bg-21-201-2024, 2024
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We compared soil model performance to data from a long-term nitrogen addition experiment in a forested ecosystem. We found that in order for soil carbon models to accurately predict future forest carbon sequestration, two key processes must respond dynamically to nitrogen availability: (1) plant allocation of carbon to wood versus roots and (2) rates of soil organic matter decomposition. Long-term experiments can help improve our predictions of the land carbon sink and its climate impact.
Jan De Pue, Sebastian Wieneke, Ana Bastos, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Maral Maleki, Fabienne Maignan, Françoise Gellens-Meulenberghs, Ivan Janssens, and Manuela Balzarolo
Biogeosciences, 20, 4795–4818, https://doi.org/10.5194/bg-20-4795-2023, https://doi.org/10.5194/bg-20-4795-2023, 2023
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The gross primary production (GPP) of the terrestrial biosphere is a key source of variability in the global carbon cycle. To estimate this flux, models can rely on remote sensing data (RS-driven), meteorological data (meteo-driven) or a combination of both (hybrid). An intercomparison of 11 models demonstrated that RS-driven models lack the sensitivity to short-term anomalies. Conversely, the simulation of soil moisture dynamics and stress response remains a challenge in meteo-driven models.
Chad A. Burton, Luigi J. Renzullo, Sami W. Rifai, and Albert I. J. M. Van Dijk
Biogeosciences, 20, 4109–4134, https://doi.org/10.5194/bg-20-4109-2023, https://doi.org/10.5194/bg-20-4109-2023, 2023
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Australia's land-based ecosystems play a critical role in controlling the variability in the global land carbon sink. However, uncertainties in the methods used for quantifying carbon fluxes limit our understanding. We develop high-resolution estimates of Australia's land carbon fluxes using machine learning methods and find that Australia is, on average, a stronger carbon sink than previously thought and that the seasonal dynamics of the fluxes differ from those described by other methods.
Yuan Yan, Anne Klosterhalfen, Fernando Moyano, Matthias Cuntz, Andrew C. Manning, and Alexander Knohl
Biogeosciences, 20, 4087–4107, https://doi.org/10.5194/bg-20-4087-2023, https://doi.org/10.5194/bg-20-4087-2023, 2023
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A better understanding of O2 fluxes, their exchange ratios with CO2 and their interrelations with environmental conditions would provide further insights into biogeochemical ecosystem processes. We, therefore, used the multilayer canopy model CANVEG to simulate and analyze the flux exchange for our forest study site for 2012–2016. Based on these simulations, we further successfully tested the application of various micrometeorological methods and the prospects of real O2 flux measurements.
Jie Zhang, Elisabeth Larsen Kolstad, Wenxin Zhang, Iris Vogeler, and Søren O. Petersen
Biogeosciences, 20, 3895–3917, https://doi.org/10.5194/bg-20-3895-2023, https://doi.org/10.5194/bg-20-3895-2023, 2023
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Manure application to agricultural land often results in large and variable N2O emissions. We propose a model with a parsimonious structure to investigate N transformations around such N2O hotspots. The model allows for new detailed insights into the interactions between transport and microbial activities regarding N2O emissions in heterogeneous soil environments. It highlights the importance of solute diffusion to N2O emissions from such hotspots which are often ignored by process-based models.
Jukka Alm, Antti Wall, Jukka-Pekka Myllykangas, Paavo Ojanen, Juha Heikkinen, Helena M. Henttonen, Raija Laiho, Kari Minkkinen, Tarja Tuomainen, and Juha Mikola
Biogeosciences, 20, 3827–3855, https://doi.org/10.5194/bg-20-3827-2023, https://doi.org/10.5194/bg-20-3827-2023, 2023
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In Finland peatlands cover one-third of land area. For half of those, with 4.3 Mha being drained for forestry, Finland reports sinks and sources of greenhouse gases in forest lands on organic soils following its UNFCCC commitment. We describe a new method for compiling soil CO2 balance that follows changes in tree volume, tree harvests and temperature. An increasing trend of emissions from 1.4 to 7.9 Mt CO2 was calculated for drained peatland forest soils in Finland for 1990–2021.
Siqi Li, Bo Zhu, Xunhua Zheng, Pengcheng Hu, Shenghui Han, Jihui Fan, Tao Wang, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, Wei Zhang, and Yong Li
Biogeosciences, 20, 3555–3572, https://doi.org/10.5194/bg-20-3555-2023, https://doi.org/10.5194/bg-20-3555-2023, 2023
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Physical soil erosion and particulate carbon, nitrogen and phosphorus loss modules were incorporated into the process-oriented hydro-biogeochemical model CNMM-DNDC to realize the accurate simulation of water-induced erosion and subsequent particulate nutrient losses at high spatiotemporal resolution.
Ivan Cornut, Nicolas Delpierre, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, Otavio Campoe, Jose Luiz Stape, Vitoria Fernanda Santos, and Guerric le Maire
Biogeosciences, 20, 3093–3117, https://doi.org/10.5194/bg-20-3093-2023, https://doi.org/10.5194/bg-20-3093-2023, 2023
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Potassium is an essential element for living organisms. Trees are dependent upon this element for certain functions that allow them to build their trunks using carbon dioxide. Using data from experiments in eucalypt plantations in Brazil and a simplified computer model of the plantations, we were able to investigate the effect that a lack of potassium can have on the production of wood. Understanding nutrient cycles is useful to understand the response of forests to environmental change.
Ivan Cornut, Guerric le Maire, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, and Nicolas Delpierre
Biogeosciences, 20, 3119–3135, https://doi.org/10.5194/bg-20-3119-2023, https://doi.org/10.5194/bg-20-3119-2023, 2023
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After simulating the effects of low levels of potassium on the canopy of trees and the uptake of carbon dioxide from the atmosphere by leaves in Part 1, here we tried to simulate the way the trees use the carbon they have acquired and the interaction with the potassium cycle in the tree. We show that the effect of low potassium on the efficiency of the trees in acquiring carbon is enough to explain why they produce less wood when they are in soils with low levels of potassium.
Xiaojuan Yang, Peter Thornton, Daniel Ricciuto, Yilong Wang, and Forrest Hoffman
Biogeosciences, 20, 2813–2836, https://doi.org/10.5194/bg-20-2813-2023, https://doi.org/10.5194/bg-20-2813-2023, 2023
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We evaluated the performance of a land surface model (ELMv1-CNP) that includes both nitrogen (N) and phosphorus (P) limitation on carbon cycle processes. We show that ELMv1-CNP produces realistic estimates of present-day carbon pools and fluxes. We show that global C sources and sinks are significantly affected by P limitation. Our study suggests that introduction of P limitation in land surface models is likely to have substantial consequences for projections of future carbon uptake.
Kevin R. Wilcox, Scott L. Collins, Alan K. Knapp, William Pockman, Zheng Shi, Melinda D. Smith, and Yiqi Luo
Biogeosciences, 20, 2707–2725, https://doi.org/10.5194/bg-20-2707-2023, https://doi.org/10.5194/bg-20-2707-2023, 2023
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The capacity for carbon storage (C capacity) is an attribute that determines how ecosystems store carbon in the future. Here, we employ novel data–model integration techniques to identify the carbon capacity of six grassland sites spanning the US Great Plains. Hot and dry sites had low C capacity due to less plant growth and high turnover of soil C, so they may be a C source in the future. Alternately, cooler and wetter ecosystems had high C capacity, so these systems may be a future C sink.
Ara Cho, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Richard Wehr, and Maarten C. Krol
Biogeosciences, 20, 2573–2594, https://doi.org/10.5194/bg-20-2573-2023, https://doi.org/10.5194/bg-20-2573-2023, 2023
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Carbonyl sulfide (COS) is a useful constraint for estimating photosynthesis. To simulate COS leaf flux better in the SiB4 model, we propose a novel temperature function for enzyme carbonic anhydrase (CA) activity and optimize conductances using observations. The optimal activity of CA occurs below 40 °C, and Ball–Woodrow–Berry parameters are slightly changed. These reduce/increase uptakes in the tropics/higher latitudes and contribute to resolving discrepancies in the COS global budget.
Yunyao Ma, Bettina Weber, Alexandra Kratz, José Raggio, Claudia Colesie, Maik Veste, Maaike Y. Bader, and Philipp Porada
Biogeosciences, 20, 2553–2572, https://doi.org/10.5194/bg-20-2553-2023, https://doi.org/10.5194/bg-20-2553-2023, 2023
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We found that the modelled annual carbon balance of biocrusts is strongly affected by both the environment (mostly air temperature and CO2 concentration) and physiology, such as temperature response of respiration. However, the relative impacts of these drivers vary across regions with different climates. Uncertainty in driving factors may lead to unrealistic carbon balance estimates, particularly in temperate climates, and may be explained by seasonal variation of physiology due to acclimation.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and T. Luke Smallman
Biogeosciences, 20, 2455–2484, https://doi.org/10.5194/bg-20-2455-2023, https://doi.org/10.5194/bg-20-2455-2023, 2023
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This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Libo Wang, Vivek K. Arora, Paul Bartlett, Ed Chan, and Salvatore R. Curasi
Biogeosciences, 20, 2265–2282, https://doi.org/10.5194/bg-20-2265-2023, https://doi.org/10.5194/bg-20-2265-2023, 2023
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Plant functional types (PFTs) are groups of plant species used to represent vegetation distribution in land surface models. There are large uncertainties associated with existing methods for mapping land cover datasets to PFTs. This study demonstrates how fine-resolution tree cover fraction and land cover datasets can be used to inform the PFT mapping process and reduce the uncertainties. The proposed largely objective method makes it easier to implement new land cover products in models.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
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Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Veronika Kronnäs, Klas Lucander, Giuliana Zanchi, Nadja Stadlinger, Salim Belyazid, and Cecilia Akselsson
Biogeosciences, 20, 1879–1899, https://doi.org/10.5194/bg-20-1879-2023, https://doi.org/10.5194/bg-20-1879-2023, 2023
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In a future climate, extreme droughts might become more common. Climate change and droughts can have negative effects on soil weathering and plant health.
In this study, climate change effects on weathering were studied on sites in Sweden using the model ForSAFE, a climate change scenario and an extreme drought scenario. The modelling shows that weathering is higher during summer and increases with global warming but that weathering during drought summers can become as low as winter weathering.
Agustín Sarquis and Carlos A. Sierra
Biogeosciences, 20, 1759–1771, https://doi.org/10.5194/bg-20-1759-2023, https://doi.org/10.5194/bg-20-1759-2023, 2023
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Although plant litter is chemically and physically heterogenous and undergoes multiple transformations, models that represent litter dynamics often ignore this complexity. We used a multi-model inference framework to include information content in litter decomposition datasets and studied the time it takes for litter to decompose as measured by the transit time. In arid lands, the median transit time of litter is about 3 years and has a negative correlation with mean annual temperature.
Qi Guan, Jing Tang, Lian Feng, Stefan Olin, and Guy Schurgers
Biogeosciences, 20, 1635–1648, https://doi.org/10.5194/bg-20-1635-2023, https://doi.org/10.5194/bg-20-1635-2023, 2023
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Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
Vivek K. Arora, Christian Seiler, Libo Wang, and Sian Kou-Giesbrecht
Biogeosciences, 20, 1313–1355, https://doi.org/10.5194/bg-20-1313-2023, https://doi.org/10.5194/bg-20-1313-2023, 2023
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The behaviour of natural systems is now very often represented through mathematical models. These models represent our understanding of how nature works. Of course, nature does not care about our understanding. Since our understanding is not perfect, evaluating models is challenging, and there are uncertainties. This paper illustrates this uncertainty for land models and argues that evaluating models in light of the uncertainty in various components provides useful information.
Benjamin S. Felzer
Biogeosciences, 20, 573–587, https://doi.org/10.5194/bg-20-573-2023, https://doi.org/10.5194/bg-20-573-2023, 2023
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The future of the terrestrial carbon sink depends upon the legacy of past land use, which determines the stand age of the forest and nutrient levels in the soil, both of which affect vegetation growth. This study uses a modeling approach to determine the effects of land-use legacy in the conterminous US from 1750 to 2099. Not accounting for land legacy results in a low carbon sink and high biomass, while water variables are not as highly affected.
Bailu Zhao and Qianlai Zhuang
Biogeosciences, 20, 251–270, https://doi.org/10.5194/bg-20-251-2023, https://doi.org/10.5194/bg-20-251-2023, 2023
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In this study, we use a process-based model to simulate the northern peatland's C dynamics in response to future climate change during 1990–2300. Northern peatlands are projected to be a C source under all climate scenarios except for the mildest one before 2100 and C sources under all scenarios afterwards.
We find northern peatlands are a C sink until pan-Arctic annual temperature reaches −2.09 to −2.89 °C. This study emphasizes the vulnerability of northern peatlands to climate change.
Lin Yu, Silvia Caldararu, Bernhard Ahrens, Thomas Wutzler, Marion Schrumpf, Julian Helfenstein, Chiara Pistocchi, and Sönke Zaehle
Biogeosciences, 20, 57–73, https://doi.org/10.5194/bg-20-57-2023, https://doi.org/10.5194/bg-20-57-2023, 2023
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In this study, we addressed a key weakness in current ecosystem models regarding the phosphorus exchange in the soil and developed a new scheme to describe this process. We showed that the new scheme improved the model performance for plant productivity, soil organic carbon, and soil phosphorus content at five beech forest sites in Germany. We claim that this new model could be used as a better tool to study ecosystems under future climate change, particularly phosphorus-limited systems.
Bimal K. Bhattacharya, Kaniska Mallick, Devansh Desai, Ganapati S. Bhat, Ross Morrison, Jamie R. Clevery, William Woodgate, Jason Beringer, Kerry Cawse-Nicholson, Siyan Ma, Joseph Verfaillie, and Dennis Baldocchi
Biogeosciences, 19, 5521–5551, https://doi.org/10.5194/bg-19-5521-2022, https://doi.org/10.5194/bg-19-5521-2022, 2022
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Evaporation retrieval in heterogeneous ecosystems is challenging due to empirical estimation of ground heat flux and complex parameterizations of conductances. We developed a parameter-sparse coupled ground heat flux-evaporation model and tested it across different limits of water stress and vegetation fraction in the Northern/Southern Hemisphere. The model performed particularly well in the savannas and showed good potential for evaporative stress monitoring from thermal infrared satellites.
Jie Zhang, Wenxin Zhang, Per-Erik Jansson, and Søren O. Petersen
Biogeosciences, 19, 4811–4832, https://doi.org/10.5194/bg-19-4811-2022, https://doi.org/10.5194/bg-19-4811-2022, 2022
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In this study, we relied on a properly controlled laboratory experiment to test the model’s capability of simulating the dominant microbial processes and the emissions of one greenhouse gas (nitrous oxide, N2O) from agricultural soils. This study reveals important processes and parameters that regulate N2O emissions in the investigated model framework and also suggests future steps of model development, which have implications on the broader communities of ecosystem modelers.
Jan De Pue, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Manuela Balzarolo, Fabienne Maignan, and Françoise Gellens-Meulenberghs
Biogeosciences, 19, 4361–4386, https://doi.org/10.5194/bg-19-4361-2022, https://doi.org/10.5194/bg-19-4361-2022, 2022
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The functioning of ecosystems involves numerous biophysical processes which interact with each other. Land surface models (LSMs) are used to describe these processes and form an essential component of climate models. In this paper, we evaluate the performance of three LSMs and their interactions with soil moisture and vegetation. Though we found room for improvement in the simulation of soil moisture and drought stress, the main cause of errors was related to the simulated growth of vegetation.
Jarmo Mäkelä, Laura Arppe, Hannu Fritze, Jussi Heinonsalo, Kristiina Karhu, Jari Liski, Markku Oinonen, Petra Straková, and Toni Viskari
Biogeosciences, 19, 4305–4313, https://doi.org/10.5194/bg-19-4305-2022, https://doi.org/10.5194/bg-19-4305-2022, 2022
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Soils account for the largest share of carbon found in terrestrial ecosystems, and accurate depiction of soil carbon decomposition is essential in understanding how permanent these carbon storages are. We present a straightforward way to include carbon isotope concentrations into soil decomposition and carbon storages for the Yasso model, which enables the model to use 13C as a natural tracer to track changes in the underlying soil organic matter decomposition.
Cited articles
Barnes, B. V., Zak, D. R., Denton, S. R., and Spurr, S. H.: Forest Ecology (4th ed.), Wiley and Sons, N. Y., 1998.
Crow, S. E., Lajtha, K., Bowden, R. D., Yano, Y., Brant, J. B., Caldwell, B. A., and Sulzman, E. W.: Increased coniferous needle inputs accelerate decomposition of soil carbon in an old-growth forest, Forest Ecol. Manage. 258, 2224–2232, 2009.
Dickson, R. E., Lewin, K. F., Isebrands, J. G., Coleman, M. D., Heilman, W. E., Riemenschneider, D. E., Sober, J., Host, G. E., Zak, D. R., Hendrey, G. R., Pregitzer, K. S., and Karnosky, D. S.: Forest atmosphere carbon transfer and storage (FACTS-II) the aspen free-air CO2 and O3 enrichment (FACE) project: an overview, USDA Forest Service General Technical Report NC-214 St. Paul, Minnesota, USA, 2000.
Drake, J. E., Gallet-Budynek, A., Hofmockel, K. S., Bernhardt, E. S., Billings, S. A., Jackson, R. B., Johnsen, K. S., Lichter, J., McCarthy, H. R., McCormack, M. L., Moore, D. J. P., Oren, R., Palmroth, S., Phillips, R. P., Pippen, J. S., Pritchard, S. G., Treseder, K. K., Schlesinger, W. H., DeLucia, E. H., and Finzi, A. C.: Increases in the flux of carbon belowground stimulate nitrogen uptake and sustain the long-term enhancement of forest productivity under elevated CO2, Ecol. Lett., 14, 349–357, 2011.
Finzi, A. C., Allen, A. S., DeLucia, E. H., Ellsworth, D. S., and Schlesinger, W. H.: Forest litter production, chemistry, and decomposition following two years of free-air CO2 enrichment, Ecology, 82, 470–484, 2001.
Finzi, A. C., Norby, R. J., Calfapietra, C., Gallet-Budynek, A., Gielen, B., Holmes, W. E., Hoosbeek, M. R., Iversen, C. M., Jackson, R. B., Kubiske, M. E., Ledford, J., Liberloo, M., Oren, R., Polle, A., Pritchard, S., Zak, D. R., Schlesinger, W. H., and Ceulemans, R.: Increases in nitrogen uptake rather than nitrogen-use efficiency support higher rates of temperate forest productivity under elevated CO2, PNAS, 104, 14014–14019, 2007.
Fontaine, S., Bardoux, G., Benest, D., Verdier, B., Mariotti, A., and Abbadie, L.: Mechanisms of the priming effect in a savannah soil amended with cellulose, Soil Sci. Soc. Amer. J., 68, 125–131, 2004.
Franklin, O., McMurtrie, R. E., Iversen, C. M ., Crous, K. Y., Finzi, A. C., Tissue, D. T., Ellsworth, D. S., Oren, R., and Norby, R. J.: Forest fine-root production and nitrogen use under elevated CO2: contrasting responses in evergreen and deciduous trees explained by a common principle, Glob. Change Biol., 15, 132–144, 2009.
Grant, R. F.: Rhizodeposition by crop plants and its relationship to microbial activity and nitrogen distribution, Model. Geo-Bio. Proc., 2, 193–209, 1993.
Grant, R. F.: Simulation in ecosys of root growth response to contrasting soil water and nitrogen, Ecol. Model., 107, 237–264, 1998.
Grant, R. F., Juma, N. G., and McGill, W. B.: Simulation of carbon and nitrogen transformations in soils. I. Mineralization, Soil Biol. Biochem., 27, 1317–1329, 1993.
Grant, R. F., Wall, G. W., Frumau, K. F. A., Pinter Jr., P. J., Hunsaker, D., Kimball, B. A., and LaMorte, R. L.: Crop water relations under different CO2 and irrigation: Testing of ecosys with the Free Air CO2 Enrichment (FACE) Experiment, Agr. For. Meteorol., 95, 27–51, 1999.
Grant, R. F., Kimball, B. A., Wall, G. W., Triggs, J. M., Brooks, T. J., Pinter Jr., P. J., Conley, M. M., Ottman, M. J., Lamorte, R. L., Leavitt, S. W., Thompson, T. L., and Matthias, A. D.: How elevated CO2 affects water relations, water use and growth of irrigated sorghum: testing a model with results from a Free Air CO2 Enrichment (FACE) experiment, Agron. J., 96, 1693–1705, 2004.
Grant, R. F., Black, T. A., Humphreys, E. R., and Morgenstern, K.: Changes in net ecosystem productivity with forest age following clearcutting of a coastal Douglas fir forest: testing a mathematical model with eddy covariance measurements along a forest chronosequence, Tree Physiol., 27, 115–131, 2007.
Grant, R. F., Barr, A. G., Black, T. A., Margolis, H. A., Dunn, A. L., Metsaranta, J., Wang, S., McCaughey, J. H., and Bourque, C. P.-A.: Interannual variation in net ecosystem productivity of Canadian forests as affected by regional weather patterns – a Fluxnet-Canada synthesis, Agric. For. Meteorol., 149, 2022–2039, 2009a.
Grant, R. F., Hutyra, L. R., de Oliveira, R. C., Munger, J. W., Saleska, S. R., and Wofsy, S. C.: Modelling the carbon balance of Amazonian rainforests: resolving ecological controls on net ecosystem productivity, Ecol. Appl., 79, 445–4638, 2009b.
Grant, R. F., Margolis, H. A., Barr, A. G., Black, T. A., Dunn, A. L., Bernier, P. Y., and Bergeron, O.: Changes in net ecosystem productivity of boreal black spruce stands in response to changes in temperature at diurnal and seasonal time scales, Tree Physiol., 29, 1–17, 2009c.
Grant, R. F., Barr, A. G., Black, T. A., Margolis, H. A., McCaughey, J. H., and Trofymow, J. A.: Net ecosystem productivity of temperate and boreal forests after clearcutting – a Fluxnet-Canada synthesis, Tellus B., 62, 475–496, 2010.
Grant, R. F., Humphreys, E. R., Lafleur, P. M., and Dimitrov, D. D.: Ecological controls on net ecosystem productivity of a mesic arctic tundra under current and future climates, J. Geophys. Res.-Biogeo., 116, G01031, https://doi.org/10.1029/2010JG001555, 2011a.
Grant, R. F., Kimball, B. A., Conley, M. M., White, J. W., Wall, G. W., and Ottman, M. J.: Controlled warming effects on wheat growth and yield: field measurements and modeling, Agron. J., 103, 1742–1754, 2011b.
Hättenschwiler, S., Miglietta, F., Raschi, A., and Körner, C.: Thirty years of in situ tree growth under elevated CO2: a model for future forest responses?, Glob. Change Biol., 3, 463–471, 1997.
Hofmockel, K. S. and Schlesinger, W. H.: Carbon dioxide effects on heterotrophic dinitrogen fixation in a temperate pine forest, Soil Sci. Soc. Am. J., 71, 140–144, 2007.
Hofmockel, K. S, Gallet-Budynek, A., McCarthy, H. R., Currie, W. S., Jackson, R. B., and Finzi, A.: Sources of increased N uptake in forest trees growing under elevated CO2: results of a large-scale 15N study, Glob. Change Biol., 17, 3338–3350, 2011a.
Hofmockel, K. S., Zak, D. R., Moran, K. K., and Jastrow, J. D.: Changes in forest soil organic matter pools after a decade of elevated CO2 and O3, Soil Biol. Biochem., 43, 1518–1527, 2011b.
Holmes, W. E., Zak, D. R., Pregitzer, K. S., and King, J. S.: Elevated CO2 and O3 alter soil nitrogen transformations beneath trembling aspen, paper birch, and sugar maple, Ecosystems, 9, 1354–1363, 2006.
Idso, S.: The long-term response of trees to atmospheric CO2 enrichment, Glob. Change Biol., 5, 493–495, 1999.
Iversen, C. M.: Digging deeper: fine-root responses to rising atmospheric CO2 concentration in forested ecosystems, New Phytol., 186, 346–357, 2010.
Iversen, C. M., Keller, J. K., Garten Jr., C. T., and Norby, R. J.: Soil carbon and nitrogen cycling and storage throughout the soil profile in a sweetgum plantation after 11 years of CO2-enrichment, Glob. Change Biol., 18, 1684–1697, https://doi.org/10.1111/j.1365-2486.2012.02643.x, 2012.
Iversen, C. M., Ledford, J., and Norby, R. J.: CO2 enrichment increases carbon and nitrogen input from fine roots in a deciduous forest, New Phytol., 179, 837–847, 2008.
Johnson, D. W., Cheng, W., Joslin, J. D., Norby, R. J., Edwards, N. T., and Todd, D. E.: Effects of elevated CO2 on nutrient cycling in a sweetgum plantation, Biogeochemistry, 69, 379–403, 2004.
Jurgensen, M. F., Graham, R. T., Larsen, M. J., and Harvey, A. E.: Clear-cutting, woody residue removal, and nonsymbiotic nitrogen fixation in forest soils of the Inland Pacific Northwest, Can. J. Forest Res., 22, 1172–1178, 1992.
Kimmins, J. P.: Forest Ecology, (3rd Ed.), Pearson Prentice Hall, NJ, 2004.
King, J. S., Kubiske, M. E., Pregitzer, K. S., Hendrey, G. R., McDonald, E. P., Giardina, C. P., Quinn, V. S., and Karnosky, D. F.: Tropospheric O3 compromises net primary production in young stands of trembling aspen, paper birch and sugar maple in response to elevated atmospheric CO2, New Phytol., 168, 623–636, 2005.
Kubiske, M. E., Quinn, V. S., Heilman, W. E., McDonald , E. P., Marquardt, P. E., Teclaw, R. M., Friend, A. L., and Karnosky, D. F.: Interannual climatic variation mediates elevated CO2 and O3 effects on forest growth, Glob. Change Biol., 12, 1054–1068, https://doi.org/10.1111/j.1365-2486.2006.01152.x, 2006.
Lichter, J., Billings, S. A., Ziegler, S. E., Gaindh, D., Ryals, R., Finzi, A. C., Jackson, R. B., Stemmler, E. A., and Schlesinger, W. H.: Soil carbon sequestration in a pine forest after 9 years of atmospheric CO2 enrichment, Glob. Change Biol., 14, 2910–2922, 2008.
Liu, L., King, J. S., and Giardina, C. P.: Effects of elevated concentrations of atmospheric CO2 and tropospheric O3 on leaf litter production and chemistry in trembling aspen and paper birch communities, Tree Physiol., 25, 1511–1522, 2005.
Long, S. P.: Modification of the response of photosynthetic productivity to rising temperature by atmospheric CO2 concentrations: Has its importance been underestimated?, Plant Cell Environ., 14, 729–739, 1991.
Luxmore, R. J., O'Neil, E. G., Ellis, J. M., and Rogers, H. H.: Nutrient uptake and growth responses of Virginia pine to elevated atmospheric carbon dioxide, J. Environ. Qual., 15, 244–251, 1986.
McCarthy, H. R., Oren, R., Johnsen, K. H., Gallet-Budynek, A., Pritchard, S. G., Cook, C. W., LaDeau, S. L., Jackson, R. B., and Finzi, A. C.: Re-assessment of plant carbon dynamics at the Duke free-air CO2 enrichment site: interactions of atmospheric [CO2] with nitrogen and water availability over stand development, New Phytol., 185, 514–528 https://doi.org/10.1111/j.1469-8137.2009.03078.x, 2010.
Medlyn, B. E., Badeck, F. W., De Pury, D. G. G., Barton, C. V. M., Broadmeadow, M., Ceulemans, R., De Angelis, P., Forstreuter, M., Jach, M. E., Kellomaki, S., Laitat, E., Marek, M., Philippot, S., Rey, A., Strassemeyer, J., Laitinen, K., Liozon, R., Portier, B., Roberntz, P., Wang, K., and Jarvis, P. G.: Effects of elevated [CO2] on photosynthesis in European forest species: a meta-analysis of model parameters, Plant Cell Environ., 22, 1475–1495, 1999.
Myers, D. A., Thomas, R. B., and DeLucia, E.: Photosynthetic capacity of loblolly pine (Pinus taeda L.) trees during the first year of carbon dioxide enrichment in a forest ecosystem, Plant Cell Environ., 22, 473–481, 1999.
Norby, R. J.: Nodulation and nitrogenase activity in nitrogen-fixing woody plants stimulated by CO2 enrichment of the atmosphere, Physiol. Plantarum, 71, 77–82, 1987.
Norby, R. J., DeLucia, E. H., Gielen, B., Calfapietra, C., Giardina, C. P., King, J. S., Ledford, J., McCarthy, H. R., Moore, D. J. P., Ceulemans, R., De Angelis, P., Finzi, A. C., Karnosky, D. F., Kubiske, M. E., Lukac, M., Pregitzer, K. S., Scarascia-Mugnozza, G. E., Schlesinger, W. H., and Oren, R.: Forest response to elevated CO2 is conserved across a broad range of productivity, PNAS, 102, 18052–18056, 2005.
Norby, R. J, Warren, J. M., Iversen, C. M., Medlyn, B. E., and McMurtrie, R. E.: CO2 enhancement of forest productivity constrained by limited nitrogen availability, PNAS, 107, 19368–19373, 2010.
Oh, N. H. and Richter, D. D.: Elemental translocation and loss from three highly weathered soil-bedrock profiles in the southeastern United States, Geoderma, 126, 5–25, 2005.
Oren, R., Ellsworth, D. S., Johnsen, K. H., Phillips, N., Ewers, B. E., Maier, C., Schäfer, K. V. R., McCarthy, H., Hendrey, G., McNulty, S. G., and Katul, G. G.: Soil fertility limits carbon sequestration by forest ecosystems in a CO2-enriched atmosphere, Nature, 411, 469–472, 2001.
Phillips, R. P., Finzi, A. C., and Bernhardt, E. S.: Enhanced root exudation induces microbial feedbacks to N cycling in a pine forest under long-term CO2 fumigation, Ecol. Lett., 14, 187–194, 2011.
Pregitzer, K., Burton, A., King, J., and Zak, D.: Soil respiration, root biomass, and root turnover following long-term exposure of northern forests to elevated atmospheric CO2 and tropospheric O3, New Phytol., 180, 153–161, 2008.
Pritchard, S. G., Strand, A. E., McCormack, M. L., Davis, M. A., Finzi, A. C., Jackson, R. B., Matamala, R., Rogers, H. H., and Oren, R.: Fine root dynamics in a loblolly pine forest are influenced by free-air-CO2-enrichment: A six-year-minirhizotron study, Glob. Change Biol., 14, 588–602, 2008a.
Pritchard, S. G., Strand, A. E., McCormack, M. L., Davis, M. A., and Oren, R.: Mycorrhizal and rhizomorph dynamics in a loblolly pine forest during 5 years of free-air- CO2-enrichment, Glob. Change Biol., 14, 1252–1264, 2008b.
Rhea, L. K. and King, J. S.: Depth-dependency of trembling aspen and paper birch small-root responses to eCO2 and eO3, Plant Soil, 355, 215–229, 2012.
Riggs, J. S., Tharp, M. L., and Norby, R. J.: ORNL FACE Weather Data. Carbon Dioxide Information Analysis Center,(http://cdiac.ornl.gov) (last access: 21 August 2012), US Department of Energy, Oak Ridge National Laboratory, Oak Ridge, Tennessee, 2010.
Rogers, H. H., Thomas, J. F., and Bingham, J. E.: Response of agronomic and forest species to elevated atmospheric carbon dioxide, Science, 220, 428–429, 1983.
Sokolov, A. P., Kicklighter, D. W., Melillo, J. M., Felzer, B. S., Schlosser, C. A., and Cronin, T. W.: Consequences of considering carbon- nitrogen interactions on the feedbacks between climate and the terrestrial carbon cycle, J. Climate, 21, 3776–3796, https://doi.org/10.1175/2008JCLI2038.1, 2008.
Talhelm, A. F., Pregitzer, K. S., and Zak, D. R.: Species-specific responses to atmospheric carbon dioxide and tropospheric ozone mediate changes in soil carbon, Ecol. Lett., 12, 1219–1228, 2009.
Talhelm, A. F., Pregitzer, K. S., and Giardina, C. P.: Long-term leaf production response to elevated atmospheric carbon dioxide and tropospheric ozone, Ecosystems, 15, 71–82, 2012.
Thornley, J. H. M.: Shoot:root allocation with respect to C, N and P: an investigation and comparison of resistance and teleonomic models, Ann. Bot., 75, 391–405, 1995.
Warren, J. M., Norby, R. J., and Wullschleger, S. D.: Elevated CO2 enhances leaf senescence during extreme drought in a temperate forest, Tree Physiol., 31, 117–130, 2011.
Zaehle, S., Friedlingstein, P., and Friend, A. D.: Terrestrial nitrogen feedbacks may accelerate future climate change, Geophys. Res. Lett., 37, L01401, https://doi.org/10.1029/2009GL041345, 2010.
Zak, D. R., Pregitzer, K. S., Kubiske, M. E., and Burton, A. J.: Forest productivity under elevated CO2 and O3: positive feedbacks to soil N cycling sustain decade-long net primary productivity enhancement by CO2, Ecol. Lett., 14, 1220–1226, https://doi.org/10.1111/j.1461-0248.2011.01692.x, 2011.
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