Articles | Volume 14, issue 14
https://doi.org/10.5194/bg-14-3561-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-14-3561-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
27 Jul 2017
Research article |
| 27 Jul 2017
Dissolved organic carbon and major and trace elements in peat porewater of sporadic, discontinuous, and continuous permafrost zones of western Siberia
Tatiana V. Raudina
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Sergey V. Loiko
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Artyom G. Lim
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Ivan V. Krickov
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Liudmila S. Shirokova
Geoscience and Environment Toulouse, UMR 5563 CNRS University of Toulouse (France), 14 Avenue Edouard Belin, 31400 Toulouse, France
N. Laverov Federal Center for Integrated Arctic Research, Russian Academy of Science, Arkhangelsk, Russia
Georgy I. Istigechev
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Daria M. Kuzmina
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Sergey P. Kulizhsky
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Sergey N. Vorobyev
BIO-GEO-CLIM Laboratory, Tomsk State University, Lenina av., 36, Tomsk, Russia
Oleg S. Pokrovsky
CORRESPONDING AUTHOR
Geoscience and Environment Toulouse, UMR 5563 CNRS University of Toulouse (France), 14 Avenue Edouard Belin, 31400 Toulouse, France
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Artem V. Chupakov, Anna Chupakova, Svetlana A. Zabelina, Liudmila S. Shirokova, and Oleg S. Pokrovsky
EGUsphere, https://doi.org/10.5194/egusphere-2024-233, https://doi.org/10.5194/egusphere-2024-233, 2024
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In boreal (non-permafrost) humic (>15 mg DOC/L) waters of a forest lake and a bog, the experimentally measured rate of photodegradation is 4 times higher than that of biodegradation. However, given the shallow (0.5 m) light-penetrating layer versus the full depth of water column (2–10 m), the biodegradation may provide the largest contribution to CO2 emission from the water surfaces
Thibault Xavier, Laurent Orgogozo, Anatoly S. Prokushkin, Esteban Alonso-González, Simon Gascoin, and Oleg S. Pokrovsky
EGUsphere, https://doi.org/10.5194/egusphere-2023-3074, https://doi.org/10.5194/egusphere-2023-3074, 2024
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Permafrost (permanently frozen soil at depth) is thawing as a result of climate change. However, estimating its future degradation is particularly challenging due to the complex multi-physical processes involved. In this work, we designed and ran numerical simulations for months on a supercomputer to quantify the impact of climate change in a forested valley of Central Siberia. There, climate change could increase the thickness of the seasonally thawed soil layer in summer by up to 45 % by 2100.
Simon Cazaurang, Manuel Marcoux, Oleg S. Pokrovsky, Sergey V. Loiko, Artem G. Lim, Stéphane Audry, Liudmila S. Shirokova, and Laurent Orgogozo
Hydrol. Earth Syst. Sci., 27, 431–451, https://doi.org/10.5194/hess-27-431-2023, https://doi.org/10.5194/hess-27-431-2023, 2023
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Moss, lichen and peat samples are reconstructed using X-ray tomography. Most samples can be cut down to a representative volume based on porosity. However, only homogeneous samples could be reduced to a representative volume based on hydraulic conductivity. For heterogeneous samples, a devoted pore network model is computed. The studied samples are mostly highly porous and water-conductive. These results must be put into perspective with compressibility phenomena occurring in field tests.
Artem G. Lim, Ivan V. Krickov, Sergey N. Vorobyev, Mikhail A. Korets, Sergey Kopysov, Liudmila S. Shirokova, Jan Karlsson, and Oleg S. Pokrovsky
Biogeosciences, 19, 5859–5877, https://doi.org/10.5194/bg-19-5859-2022, https://doi.org/10.5194/bg-19-5859-2022, 2022
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In order to quantify C transport and emission and main environmental factors controlling the C cycle in Siberian rivers, we investigated the largest tributary of the Ob River, the Ket River basin, by measuring spatial and seasonal variations in carbon CO2 and CH4 concentrations and emissions together with hydrochemical analyses. The obtained results are useful for large-scale modeling of C emission and export fluxes from permafrost-free boreal rivers of an underrepresented region of the world.
Sergey N. Vorobyev, Jan Karlsson, Yuri Y. Kolesnichenko, Mikhail A. Korets, and Oleg S. Pokrovsky
Biogeosciences, 18, 4919–4936, https://doi.org/10.5194/bg-18-4919-2021, https://doi.org/10.5194/bg-18-4919-2021, 2021
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In order to quantify riverine carbon (C) exchange with the atmosphere in permafrost regions, we report a first assessment of CO2 and CH4 concentration and fluxes of the largest permafrost-affected river, the Lena River, during the peak of spring flow. The results allowed identification of environmental factors controlling GHG concentrations and emission in the Lena River watershed; this new knowledge can be used for foreseeing future changes in C balance in permafrost-affected Arctic rivers.
Artem G. Lim, Martin Jiskra, Jeroen E. Sonke, Sergey V. Loiko, Natalia Kosykh, and Oleg S. Pokrovsky
Biogeosciences, 17, 3083–3097, https://doi.org/10.5194/bg-17-3083-2020, https://doi.org/10.5194/bg-17-3083-2020, 2020
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To better understand the mercury (Hg) content in northern soils, we measured Hg concentration in peat cores across a 1700 km permafrost gradient in Siberia. We demonstrated a northward increase in Hg concentration in peat and Hg pools in frozen peatlands. We revised the 0–30 cm northern soil Hg pool to be 72 Gg, which is 7 % of the global soil Hg pool of 1086 Gg. The results are important for understanding Hg exchange between soil, water, and the atmosphere under climate change in the Arctic.
Liudmila S. Shirokova, Artem V. Chupakov, Svetlana A. Zabelina, Natalia V. Neverova, Dahedrey Payandi-Rolland, Carole Causserand, Jan Karlsson, and Oleg S. Pokrovsky
Biogeosciences, 16, 2511–2526, https://doi.org/10.5194/bg-16-2511-2019, https://doi.org/10.5194/bg-16-2511-2019, 2019
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Regardless of the size and landscape context of surface water in frozen peatland in NE Europe, the bio- and photo-degradability of dissolved organic matter (DOM) over a 1-month incubation across a range of temperatures was below 10 %. We challenge the paradigm of dominance of photolysis and biodegradation in DOM processing in surface waters from frozen peatland, and we hypothesize peat pore-water DOM degradation and respiration of sediments to be the main drivers of CO2 emission in this region.
Ivan V. Krickov, Artem G. Lim, Rinat M. Manasypov, Sergey V. Loiko, Liudmila S. Shirokova, Sergey N. Kirpotin, Jan Karlsson, and Oleg S. Pokrovsky
Biogeosciences, 15, 6867–6884, https://doi.org/10.5194/bg-15-6867-2018, https://doi.org/10.5194/bg-15-6867-2018, 2018
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We tested the effect of climate, permafrost and physio-geographical landscape parameters on particulate C, N and P concentrations in small- and medium- sized rivers in the Western Siberian Lowland (WSL). We discovered a maximum of particulate C and N concentrations at the beginning of the permafrost appearance. A northward shift of permafrost boundaries may increase the particulate C and N export by WSL rivers to the Arctic Ocean by a factor of 2.
Nikolaos Evangeliou, Vladimir P. Shevchenko, Karl Espen Yttri, Sabine Eckhardt, Espen Sollum, Oleg S. Pokrovsky, Vasily O. Kobelev, Vladimir B. Korobov, Andrey A. Lobanov, Dina P. Starodymova, Sergey N. Vorobiev, Rona L. Thompson, and Andreas Stohl
Atmos. Chem. Phys., 18, 963–977, https://doi.org/10.5194/acp-18-963-2018, https://doi.org/10.5194/acp-18-963-2018, 2018
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We present EC measurements from an uncertain region in terms of emissions (Russia). Its origin is quantified with a Lagrangian model that uses a recently developed feature that allows backward estimation of the specific source locations that contribute to the deposited mass. In NW European Russia transportation and domestic combustion from Finland was important. A systematic underestimation was found in W Siberia at places where gas flaring was important, implying miscalculation or sources.
Vladimir P. Shevchenko, Oleg S. Pokrovsky, Sergey N. Vorobyev, Ivan V. Krickov, Rinat M. Manasypov, Nadezhda V. Politova, Sergey G. Kopysov, Olga M. Dara, Yves Auda, Liudmila S. Shirokova, Larisa G. Kolesnichenko, Valery A. Zemtsov, and Sergey N. Kirpotin
Hydrol. Earth Syst. Sci., 21, 5725–5746, https://doi.org/10.5194/hess-21-5725-2017, https://doi.org/10.5194/hess-21-5725-2017, 2017
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We used a coupled hydrological–hydrochemical approach to assess the impact of snow on river and lake water chemistry across a permafrost gradient in very poorly studied Western Siberia Lowland (WSL), encompassing > 1.5 million km2. The riverine springtime fluxes of major and trace element in WSL rivers might be strongly overestimated due to previously unknown input from the snow deposition.
Aleksandr F. Sabrekov, Benjamin R. K. Runkle, Mikhail V. Glagolev, Irina E. Terentieva, Victor M. Stepanenko, Oleg R. Kotsyurbenko, Shamil S. Maksyutov, and Oleg S. Pokrovsky
Biogeosciences, 14, 3715–3742, https://doi.org/10.5194/bg-14-3715-2017, https://doi.org/10.5194/bg-14-3715-2017, 2017
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Boreal lakes and wetland ponds have pronounced impacts on the global methane cycle. During field campaigns to West Siberian lakes, strong variations in the methane flux on both local and regional scales were observed, with significant emissions from southern taiga lakes. A newly constructed process-based model helps reveal what controls this variability and on what spatial scales. Our results provide insights into the emissions and possible ways to significantly improve global carbon models.
Oleg S. Pokrovsky, Rinat M. Manasypov, Sergey V. Loiko, Ivan A. Krickov, Sergey G. Kopysov, Larisa G. Kolesnichenko, Sergey N. Vorobyev, and Sergey N. Kirpotin
Biogeosciences, 13, 1877–1900, https://doi.org/10.5194/bg-13-1877-2016, https://doi.org/10.5194/bg-13-1877-2016, 2016
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Climate change in western Siberia and permafrost boundary migration will essentially affect the elements controlled by underground water feeding (DIC, alkaline earth elements (Ca, Sr), oxyanions (Mo, Sb, As) and U). The thickening of the active layer may increase the export of trivalent and tetravalent hydrolysates in the form of organo-ferric colloids.
O. S. Pokrovsky, R. M. Manasypov, S. Loiko, L. S. Shirokova, I. A. Krickov, B. G. Pokrovsky, L. G. Kolesnichenko, S. G. Kopysov, V. A. Zemtzov, S. P. Kulizhsky, S. N. Vorobyev, and S. N. Kirpotin
Biogeosciences, 12, 6301–6320, https://doi.org/10.5194/bg-12-6301-2015, https://doi.org/10.5194/bg-12-6301-2015, 2015
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The governing parameter of DOC and major element concentrations and fluxes in western Siberia is latitude. High fluxes in the continuous permafrost zone of frozen peat bogs stem from the fact that the underlining mineral layer is not reactive, protected by the permafrost so that the major part of the active layer is located within the organic (peat) matrix and not the mineral matrix. Possible changes in export fluxes of DOC and major river water components under permafrost thaw are quantified.
R. M. Manasypov, S. N. Vorobyev, S. V. Loiko, I. V. Kritzkov, L. S. Shirokova, V. P. Shevchenko, S. N. Kirpotin, S. P. Kulizhsky, L. G. Kolesnichenko, V. A. Zemtzov, V. V. Sinkinov, and O. S. Pokrovsky
Biogeosciences, 12, 3009–3028, https://doi.org/10.5194/bg-12-3009-2015, https://doi.org/10.5194/bg-12-3009-2015, 2015
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A year-around hydrochemical study (including full winter freezing and spring flood) of shallow thermokarst lakes from a discontinuous permafrost zone of western Siberia revealed conceptually new features of element concentration evolution over different seasons within a large scale of the lake size.
R. M. Manasypov, O. S. Pokrovsky, S. N. Kirpotin, and L. S. Shirokova
The Cryosphere, 8, 1177–1193, https://doi.org/10.5194/tc-8-1177-2014, https://doi.org/10.5194/tc-8-1177-2014, 2014
O. S. Pokrovsky, L. S. Shirokova, J. Viers, V. V. Gordeev, V. P. Shevchenko, A. V. Chupakov, T. Y. Vorobieva, F. Candaudap, C. Causserand, A. Lanzanova, and C. Zouiten
Ocean Sci., 10, 107–125, https://doi.org/10.5194/os-10-107-2014, https://doi.org/10.5194/os-10-107-2014, 2014
O. S. Pokrovsky, L. S. Shirokova, S. N. Kirpotin, S. P. Kulizhsky, and S. N. Vorobiev
Biogeosciences, 10, 5349–5365, https://doi.org/10.5194/bg-10-5349-2013, https://doi.org/10.5194/bg-10-5349-2013, 2013
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In this research, we assessed the diversity and function of the dark septate endophytic (DSE) fungi community associated with Miscanthus condensatus root in volcanic ecosystems. Both metabarcoding and isolation were adopted in this study. We further validated effects on plant growth by inoculation of some core DSE isolates. This study helps improve our understanding of the role of Miscanthus condensatus-associated DSE fungi during the restoration of post-volcanic ecosystems.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Ying-Ping Wang, Julian Helfenstein, Yuanyuan Huang, and Enqing Hou
Biogeosciences, 20, 4147–4163, https://doi.org/10.5194/bg-20-4147-2023, https://doi.org/10.5194/bg-20-4147-2023, 2023
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We identified total soil P concentration as the most important predictor of all soil P pool concentrations, except for primary mineral P concentration, which is primarily controlled by soil pH and only secondarily by total soil P concentration. We predicted soil P pools’ distributions in natural systems, which can inform assessments of the role of natural P availability for ecosystem productivity, climate change mitigation, and the functioning of the Earth system.
Imane Slimani, Xia Zhu-Barker, Patricia Lazicki, and William Horwath
Biogeosciences, 20, 3873–3894, https://doi.org/10.5194/bg-20-3873-2023, https://doi.org/10.5194/bg-20-3873-2023, 2023
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There is a strong link between nitrogen availability and iron minerals in soils. These minerals have multiple outcomes for nitrogen availability depending on soil conditions and properties. For example, iron can limit microbial degradation of nitrogen in aerated soils but has opposing outcomes in non-aerated soils. This paper focuses on the multiple ways iron can affect nitrogen bioavailability in soils.
Shane W. Stoner, Marion Schrumpf, Alison Hoyt, Carlos A. Sierra, Sebastian Doetterl, Valier Galy, and Susan Trumbore
Biogeosciences, 20, 3151–3163, https://doi.org/10.5194/bg-20-3151-2023, https://doi.org/10.5194/bg-20-3151-2023, 2023
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Soils store more carbon (C) than any other terrestrial C reservoir, but the processes that control how much C stays in soil, and for how long, are very complex. Here, we used a recent method that involves heating soil in the lab to measure the range of C ages in soil. We found that most C in soil is decades to centuries old, while some stays for much shorter times (days to months), and some is thousands of years old. Such detail helps us to estimate how soil C may react to changing climate.
Adetunji Alex Adekanmbi, Laurence Dale, Liz Shaw, and Tom Sizmur
Biogeosciences, 20, 2207–2219, https://doi.org/10.5194/bg-20-2207-2023, https://doi.org/10.5194/bg-20-2207-2023, 2023
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The decomposition of soil organic matter and flux of carbon dioxide are expected to increase as temperatures rise. However, soil organic matter decomposition is a two-step process whereby large molecules are first broken down outside microbial cells and then respired within microbial cells. We show here that these two steps are not equally sensitive to increases in soil temperature and that global warming may cause a shift in the rate-limiting step from outside to inside the microbial cell.
Mercedes Román Dobarco, Alexandre M. J-C. Wadoux, Brendan Malone, Budiman Minasny, Alex B. McBratney, and Ross Searle
Biogeosciences, 20, 1559–1586, https://doi.org/10.5194/bg-20-1559-2023, https://doi.org/10.5194/bg-20-1559-2023, 2023
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Soil organic carbon (SOC) is of a heterogeneous nature and varies in chemistry, stabilisation mechanisms, and persistence in soil. In this study we mapped the stocks of SOC fractions with different characteristics and turnover rates (presumably PyOC >= MAOC > POC) across Australia, combining spectroscopy and digital soil mapping. The SOC stocks (0–30 cm) were estimated as 13 Pg MAOC, 2 Pg POC, and 5 Pg PyOC.
Frederick Büks
Biogeosciences, 20, 1529–1535, https://doi.org/10.5194/bg-20-1529-2023, https://doi.org/10.5194/bg-20-1529-2023, 2023
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Ultrasonication with density fractionation of soils is a commonly used method to separate soil organic matter pools, which is, e.g., important to calculate carbon turnover in landscapes. It is shown that the approach that merges soil and dense solution without mixing has a low recovery rate and causes co-extraction of parts of the retained labile pool along with the intermediate pool. An alternative method with high recovery rates and no cross-contamination was recommended.
Tino Peplau, Christopher Poeplau, Edward Gregorich, and Julia Schroeder
Biogeosciences, 20, 1063–1074, https://doi.org/10.5194/bg-20-1063-2023, https://doi.org/10.5194/bg-20-1063-2023, 2023
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We buried tea bags and temperature loggers in a paired-plot design in soils under forest and agricultural land and retrieved them after 2 years to quantify the effect of land-use change on soil temperature and litter decomposition in subarctic agricultural systems. We could show that agricultural soils were on average 2 °C warmer than forests and that litter decomposition was enhanced. The results imply that deforestation amplifies effects of climate change on soil organic matter dynamics.
Joseph Okello, Marijn Bauters, Hans Verbeeck, Samuel Bodé, John Kasenene, Astrid Françoys, Till Engelhardt, Klaus Butterbach-Bahl, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 20, 719–735, https://doi.org/10.5194/bg-20-719-2023, https://doi.org/10.5194/bg-20-719-2023, 2023
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The increase in global and regional temperatures has the potential to drive accelerated soil organic carbon losses in tropical forests. We simulated climate warming by translocating intact soil cores from higher to lower elevations. The results revealed increasing temperature sensitivity and decreasing losses of soil organic carbon with increasing elevation. Our results suggest that climate warming may trigger enhanced losses of soil organic carbon from tropical montane forests.
Johanna Pihlblad, Louise C. Andresen, Catriona A. Macdonald, David S. Ellsworth, and Yolima Carrillo
Biogeosciences, 20, 505–521, https://doi.org/10.5194/bg-20-505-2023, https://doi.org/10.5194/bg-20-505-2023, 2023
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Elevated CO2 in the atmosphere increases forest biomass productivity when growth is not limited by soil nutrients. This study explores how mature trees stimulate soil availability of nitrogen and phosphorus with free-air carbon dioxide enrichment after 5 years of fumigation. We found that both nutrient availability and processes feeding available pools increased in the rhizosphere, and phosphorus increased at depth. This appears to not be by decomposition but by faster recycling of nutrients.
Rodrigo Vargas and Van Huong Le
Biogeosciences, 20, 15–26, https://doi.org/10.5194/bg-20-15-2023, https://doi.org/10.5194/bg-20-15-2023, 2023
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Quantifying the role of soils in nature-based solutions requires accurate estimates of soil greenhouse gas (GHG) fluxes. We suggest that multiple GHG fluxes should not be simultaneously measured at a few fixed time intervals, but an optimized sampling approach can reduce bias and uncertainty. Our results have implications for assessing GHG fluxes from soils and a better understanding of the role of soils in nature-based solutions.
Kristine Karstens, Benjamin Leon Bodirsky, Jan Philipp Dietrich, Marta Dondini, Jens Heinke, Matthias Kuhnert, Christoph Müller, Susanne Rolinski, Pete Smith, Isabelle Weindl, Hermann Lotze-Campen, and Alexander Popp
Biogeosciences, 19, 5125–5149, https://doi.org/10.5194/bg-19-5125-2022, https://doi.org/10.5194/bg-19-5125-2022, 2022
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Soil organic carbon (SOC) has been depleted by anthropogenic land cover change and agricultural management. While SOC models often simulate detailed biochemical processes, the management decisions are still little investigated at the global scale. We estimate that soils have lost around 26 GtC relative to a counterfactual natural state in 1975. Yet, since 1975, SOC has been increasing again by 4 GtC due to a higher productivity, recycling of crop residues and manure, and no-tillage practices.
Petri Kiuru, Marjo Palviainen, Arianna Marchionne, Tiia Grönholm, Maarit Raivonen, Lukas Kohl, and Annamari Laurén
Biogeosciences, 19, 5041–5058, https://doi.org/10.5194/bg-19-5041-2022, https://doi.org/10.5194/bg-19-5041-2022, 2022
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Peatlands are large carbon stocks. Emissions of carbon dioxide and methane from peatlands may increase due to changes in management and climate. We studied the variation in the gas diffusivity of peat with depth using pore network simulations and laboratory experiments. Gas diffusivity was found to be lower in deeper peat with smaller pores and lower pore connectivity. However, gas diffusivity was not extremely low in wet conditions, which may reflect the distinctive structure of peat.
Rachael Akinyede, Martin Taubert, Marion Schrumpf, Susan Trumbore, and Kirsten Küsel
Biogeosciences, 19, 4011–4028, https://doi.org/10.5194/bg-19-4011-2022, https://doi.org/10.5194/bg-19-4011-2022, 2022
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Soils will likely become warmer in the future, and this can increase the release of carbon dioxide (CO2) into the atmosphere. As microbes can take up soil CO2 and prevent further escape into the atmosphere, this study compares the rate of uptake and release of CO2 at two different temperatures. With warming, the rate of CO2 uptake increases less than the rate of release, indicating that the capacity to modulate soil CO2 release into the atmosphere will decrease under future warming.
Giuseppe Cipolla, Salvatore Calabrese, Amilcare Porporato, and Leonardo V. Noto
Biogeosciences, 19, 3877–3896, https://doi.org/10.5194/bg-19-3877-2022, https://doi.org/10.5194/bg-19-3877-2022, 2022
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Enhanced weathering (EW) is a promising strategy for carbon sequestration. Since models may help to characterize field EW, the present work applies a hydro-biogeochemical model to four case studies characterized by different rainfall seasonality, vegetation and soil type. Rainfall seasonality strongly affects EW dynamics, but low carbon sequestration suggests that an in-depth analysis at the global scale is required to see if EW may be effective to mitigate climate change.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
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In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Katherine E. O. Todd-Brown, Rose Z. Abramoff, Jeffrey Beem-Miller, Hava K. Blair, Stevan Earl, Kristen J. Frederick, Daniel R. Fuka, Mario Guevara Santamaria, Jennifer W. Harden, Katherine Heckman, Lillian J. Heran, James R. Holmquist, Alison M. Hoyt, David H. Klinges, David S. LeBauer, Avni Malhotra, Shelby C. McClelland, Lucas E. Nave, Katherine S. Rocci, Sean M. Schaeffer, Shane Stoner, Natasja van Gestel, Sophie F. von Fromm, and Marisa L. Younger
Biogeosciences, 19, 3505–3522, https://doi.org/10.5194/bg-19-3505-2022, https://doi.org/10.5194/bg-19-3505-2022, 2022
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Research data are becoming increasingly available online with tantalizing possibilities for reanalysis. However harmonizing data from different sources remains challenging. Using the soils community as an example, we walked through the various strategies that researchers currently use to integrate datasets for reanalysis. We find that manual data transcription is still extremely common and that there is a critical need for community-supported informatics tools like vocabularies and ontologies.
Alessandro Montemagno, Christophe Hissler, Victor Bense, Adriaan J. Teuling, Johanna Ziebel, and Laurent Pfister
Biogeosciences, 19, 3111–3129, https://doi.org/10.5194/bg-19-3111-2022, https://doi.org/10.5194/bg-19-3111-2022, 2022
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We investigated the biogeochemical processes that dominate the release and retention of elements (nutrients and potentially toxic elements) during litter degradation. Our results show that toxic elements are retained in the litter, while nutrients are released in solution during the first stages of degradation. This seems linked to the capability of trees to distribute the elements between degradation-resistant and non-degradation-resistant compounds of leaves according to their chemical nature.
Laura Sereni, Bertrand Guenet, Charlotte Blasi, Olivier Crouzet, Jean-Christophe Lata, and Isabelle Lamy
Biogeosciences, 19, 2953–2968, https://doi.org/10.5194/bg-19-2953-2022, https://doi.org/10.5194/bg-19-2953-2022, 2022
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This study focused on the modellisation of two important drivers of soil greenhouse gas emissions: soil contamination and soil moisture change. The aim was to include a Cu function in the soil biogeochemical model DNDC for different soil moisture conditions and then to estimate variation in N2O, NO2 or NOx emissions. Our results show a larger effect of Cu on N2 and N2O emissions than on the other nitrogen species and a higher effect for the soils incubated under constant constant moisture.
Marie Spohn and Johan Stendahl
Biogeosciences, 19, 2171–2186, https://doi.org/10.5194/bg-19-2171-2022, https://doi.org/10.5194/bg-19-2171-2022, 2022
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We explored the ratios of carbon (C), nitrogen (N), and phosphorus (P) of organic matter in Swedish forest soils. The N : P ratio of the organic layer was most strongly related to the mean annual temperature, while the C : N ratios of the organic layer and mineral soil were strongly related to tree species even in the subsoil. The organic P concentration in the mineral soil was strongly affected by soil texture, which diminished the effect of tree species on the C to organic P (C : OP) ratio.
Moritz Mainka, Laura Summerauer, Daniel Wasner, Gina Garland, Marco Griepentrog, Asmeret Asefaw Berhe, and Sebastian Doetterl
Biogeosciences, 19, 1675–1689, https://doi.org/10.5194/bg-19-1675-2022, https://doi.org/10.5194/bg-19-1675-2022, 2022
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The largest share of terrestrial carbon is stored in soils, making them highly relevant as regards global change. Yet, the mechanisms governing soil carbon stabilization are not well understood. The present study contributes to a better understanding of these processes. We show that qualitative changes in soil organic matter (SOM) co-vary with alterations of the soil matrix following soil weathering. Hence, the type of SOM that is stabilized in soils might change as soils develop.
Jasmin Fetzer, Emmanuel Frossard, Klaus Kaiser, and Frank Hagedorn
Biogeosciences, 19, 1527–1546, https://doi.org/10.5194/bg-19-1527-2022, https://doi.org/10.5194/bg-19-1527-2022, 2022
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As leaching is a major pathway of nitrogen and phosphorus loss in forest soils, we investigated several potential drivers in two contrasting beech forests. The composition of leachates, obtained by zero-tension lysimeters, varied by season, and climatic extremes influenced the magnitude of leaching. Effects of nitrogen and phosphorus fertilization varied with soil nutrient status and sorption properties, and leaching from the low-nutrient soil was more sensitive to environmental factors.
Karis J. McFarlane, Heather M. Throckmorton, Jeffrey M. Heikoop, Brent D. Newman, Alexandra L. Hedgpeth, Marisa N. Repasch, Thomas P. Guilderson, and Cathy J. Wilson
Biogeosciences, 19, 1211–1223, https://doi.org/10.5194/bg-19-1211-2022, https://doi.org/10.5194/bg-19-1211-2022, 2022
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Planetary warming is increasing seasonal thaw of permafrost, making this extensive old carbon stock vulnerable. In northern Alaska, we found more and older dissolved organic carbon in small drainages later in summer as more permafrost was exposed by deepening thaw. Younger and older carbon did not differ in chemical indicators related to biological lability suggesting this carbon can cycle through aquatic systems and contribute to greenhouse gas emissions as warming increases permafrost thaw.
Pengzhi Zhao, Daniel Joseph Fallu, Sara Cucchiaro, Paolo Tarolli, Clive Waddington, David Cockcroft, Lisa Snape, Andreas Lang, Sebastian Doetterl, Antony G. Brown, and Kristof Van Oost
Biogeosciences, 18, 6301–6312, https://doi.org/10.5194/bg-18-6301-2021, https://doi.org/10.5194/bg-18-6301-2021, 2021
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We investigate the factors controlling the soil organic carbon (SOC) stability and temperature sensitivity of abandoned prehistoric agricultural terrace soils. Results suggest that the burial of former topsoil due to terracing provided an SOC stabilization mechanism. Both the soil C : N ratio and SOC mineral protection regulate soil SOC temperature sensitivity. However, which mechanism predominantly controls SOC temperature sensitivity depends on the age of the buried terrace soils.
Heleen Deroo, Masuda Akter, Samuel Bodé, Orly Mendoza, Haichao Li, Pascal Boeckx, and Steven Sleutel
Biogeosciences, 18, 5035–5051, https://doi.org/10.5194/bg-18-5035-2021, https://doi.org/10.5194/bg-18-5035-2021, 2021
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We assessed if and how incorporation of exogenous organic carbon (OC) such as straw could affect decomposition of native soil organic carbon (SOC) under different irrigation regimes. Addition of exogenous OC promoted dissolution of native SOC, partly because of increased Fe reduction, leading to more net release of Fe-bound SOC. Yet, there was no proportionate priming of SOC-derived DOC mineralisation. Water-saving irrigation can retard both priming of SOC dissolution and mineralisation.
Frances A. Podrebarac, Sharon A. Billings, Kate A. Edwards, Jérôme Laganière, Matthew J. Norwood, and Susan E. Ziegler
Biogeosciences, 18, 4755–4772, https://doi.org/10.5194/bg-18-4755-2021, https://doi.org/10.5194/bg-18-4755-2021, 2021
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Soil respiration is a large and temperature-responsive flux in the global carbon cycle. We found increases in microbial use of easy to degrade substrates enhanced the temperature response of respiration in soils layered as they are in situ. This enhanced response is consistent with soil composition differences in warm relative to cold climate forests. These results highlight the importance of the intact nature of soils rarely studied in regulating responses of CO2 fluxes to changing temperature.
Elisa Bruni, Bertrand Guenet, Yuanyuan Huang, Hugues Clivot, Iñigo Virto, Roberta Farina, Thomas Kätterer, Philippe Ciais, Manuel Martin, and Claire Chenu
Biogeosciences, 18, 3981–4004, https://doi.org/10.5194/bg-18-3981-2021, https://doi.org/10.5194/bg-18-3981-2021, 2021
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Increasing soil organic carbon (SOC) stocks is beneficial for climate change mitigation and food security. One way to enhance SOC stocks is to increase carbon input to the soil. We estimate the amount of carbon input required to reach a 4 % annual increase in SOC stocks in 14 long-term agricultural experiments around Europe. We found that annual carbon input should increase by 43 % under current temperature conditions, by 54 % for a 1 °C warming scenario and by 120 % for a 5 °C warming scenario.
Rainer Brumme, Bernd Ahrends, Joachim Block, Christoph Schulz, Henning Meesenburg, Uwe Klinck, Markus Wagner, and Partap K. Khanna
Biogeosciences, 18, 3763–3779, https://doi.org/10.5194/bg-18-3763-2021, https://doi.org/10.5194/bg-18-3763-2021, 2021
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In order to study the fate of litter nitrogen in forest soils, we combined a leaf litterfall exchange experiment using 15N-labeled leaf litter with long-term element budgets at seven European beech sites in Germany. It appears that fructification intensity, which has increased in recent decades, has a distinct impact on N retention in forest soils. Despite reduced nitrogen deposition, about 6 and 10 kg ha−1 of nitrogen were retained annually in the soils and in the forest stands, respectively.
Lorenz Gfeller, Andrea Weber, Isabelle Worms, Vera I. Slaveykova, and Adrien Mestrot
Biogeosciences, 18, 3445–3465, https://doi.org/10.5194/bg-18-3445-2021, https://doi.org/10.5194/bg-18-3445-2021, 2021
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Our incubation experiment shows that flooding of polluted floodplain soils may induce pulses of both mercury (Hg) and methylmercury to the soil solution and threaten downstream ecosystems. We demonstrate that mobilization of Hg bound to manganese oxides is a relevant process in organic-matter-poor soils. Addition of organic amendments accelerates this mobilization but also facilitates the formation of nanoparticulate Hg and the subsequent fixation of Hg from soil solution to the soil.
Yao Zhang, Jocelyn M. Lavallee, Andy D. Robertson, Rebecca Even, Stephen M. Ogle, Keith Paustian, and M. Francesca Cotrufo
Biogeosciences, 18, 3147–3171, https://doi.org/10.5194/bg-18-3147-2021, https://doi.org/10.5194/bg-18-3147-2021, 2021
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Soil organic matter (SOM) is essential for the health of soils, and the accumulation of SOM helps removal of CO2 from the atmosphere. Here we present the result of the continued development of a mathematical model that simulates SOM and its measurable fractions. In this study, we simulated several grassland sites in the US, and the model generally captured the carbon and nitrogen amounts in SOM and their distribution between the measurable fractions throughout the entire soil profile.
Zhongkui Luo, Raphael A. Viscarra-Rossel, and Tian Qian
Biogeosciences, 18, 2063–2073, https://doi.org/10.5194/bg-18-2063-2021, https://doi.org/10.5194/bg-18-2063-2021, 2021
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Using the data from 141 584 whole-soil profiles across the globe, we disentangled the relative importance of biotic, climatic and edaphic variables in controlling global SOC stocks. The results suggested that soil properties and climate contributed similarly to the explained global variance of SOC in four sequential soil layers down to 2 m. However, the most important individual controls are consistently soil-related, challenging current climate-driven framework of SOC dynamics.
Debjani Sihi, Xiaofeng Xu, Mónica Salazar Ortiz, Christine S. O'Connell, Whendee L. Silver, Carla López-Lloreda, Julia M. Brenner, Ryan K. Quinn, Jana R. Phillips, Brent D. Newman, and Melanie A. Mayes
Biogeosciences, 18, 1769–1786, https://doi.org/10.5194/bg-18-1769-2021, https://doi.org/10.5194/bg-18-1769-2021, 2021
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Humid tropical soils are important sources and sinks of methane. We used model simulation to understand how different kinds of microbes and observed soil moisture and oxygen dynamics contribute to production and consumption of methane along a wet tropical hillslope during normal and drought conditions. Drought alters the diffusion of oxygen and microbial substrates into and out of soil microsites, resulting in enhanced methane release from the entire hillslope during drought recovery.
Mathieu Chassé, Suzanne Lutfalla, Lauric Cécillon, François Baudin, Samuel Abiven, Claire Chenu, and Pierre Barré
Biogeosciences, 18, 1703–1718, https://doi.org/10.5194/bg-18-1703-2021, https://doi.org/10.5194/bg-18-1703-2021, 2021
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Evolution of organic carbon content in soils could be a major driver of atmospheric greenhouse gas concentrations over the next century. Understanding factors controlling carbon persistence in soil is a challenge. Our study of unique long-term bare-fallow samples, depleted in labile organic carbon, helps improve the separation, evaluation and characterization of carbon pools with distinct residence time in soils and gives insight into the mechanisms explaining soil organic carbon persistence.
Melisa A. Diaz, Christopher B. Gardner, Susan A. Welch, W. Andrew Jackson, Byron J. Adams, Diana H. Wall, Ian D. Hogg, Noah Fierer, and W. Berry Lyons
Biogeosciences, 18, 1629–1644, https://doi.org/10.5194/bg-18-1629-2021, https://doi.org/10.5194/bg-18-1629-2021, 2021
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Water-soluble salt and nutrient concentrations of soils collected along the Shackleton Glacier, Antarctica, show distinct geochemical gradients related to latitude, longitude, elevation, soil moisture, and distance from coast and glacier. Machine learning algorithms were used to estimate geochemical gradients for the region given the relationship with geography. Geography and surface exposure age drive salt and nutrient abundances, influencing invertebrate habitat suitability and biogeography.
Marion Schrumpf, Klaus Kaiser, Allegra Mayer, Günter Hempel, and Susan Trumbore
Biogeosciences, 18, 1241–1257, https://doi.org/10.5194/bg-18-1241-2021, https://doi.org/10.5194/bg-18-1241-2021, 2021
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A large amount of organic carbon (OC) in soil is protected against decay by bonding to minerals. We studied the release of mineral-bonded OC by NaF–NaOH extraction and H2O2 oxidation. Unexpectedly, extraction and oxidation removed mineral-bonded OC at roughly constant portions and of similar age distributions, irrespective of mineral composition, land use, and soil depth. The results suggest uniform modes of interactions between OC and minerals across soils in quasi-steady state with inputs.
Lena Rohe, Bernd Apelt, Hans-Jörg Vogel, Reinhard Well, Gi-Mick Wu, and Steffen Schlüter
Biogeosciences, 18, 1185–1201, https://doi.org/10.5194/bg-18-1185-2021, https://doi.org/10.5194/bg-18-1185-2021, 2021
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Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for different combinations of soils and water contents. Prediction accuracy of (N2O + N2) fluxes was highest with combined proxies for oxygen demand (CO2 flux) and oxygen supply (anaerobic soil volume fraction). Knowledge of denitrification completeness (product ratio) improved N2O predictions. Substitutions with cheaper proxies (soil organic matter, empirical diffusivity) reduced prediction accuracy.
Cited articles
Abbott, B. W., Larouche, J. R., Jones Jr., J. B., Bowden, W. B., and Balser, A. W.: Elevated dissolved organic carbon biodegradability from thawing and collapsing permafrost, J. Geophys. Res.-Biogeo., 119, 2049–2063, 2014.
Akerman, H. J. and Johansson, M.: Thawing permafrost and thicker active layers in sub-arctic Sweden, Permafrost Periglac., 19, 279–292, 2008.
Alexandrov, G. A., Brovkin, V. A., and Kleinen, T. : The influence of climate on peatland extent in Western Siberia since the Last Glacial Maximum, Sci. Reports, 6, 24784, https://doi.org/10.1038/srep24784, 2016.
Anisimov, O. A., Shiklomanov, N. I., and Nelson, F. E.: Variability of seasonal thaw depth in permafrost regions: A stochastic modeling approach, Ecol. Model., 153, 217–227, 2002.
Anisimov, O. A., Kokorev, V., and Zhil'tsova, Y.: Temporal and spatial patterns of modern climatic warming: Case study of Northern Eurasia, Climatic Change, 118, 871–883, 2013.
Bagard, M. L., Chabaux, F., Pokrovsky, O. S., Prokushkin, A. S., Viers, J., Dupré, B., and Stille, P.: Seasonal variability of element fluxes in two Central Siberian rivers draining high latitude permafrost dominated areas, Geochim. Cosmochim. Ac., 75, 3335–3357, 2011.
Bagard, M. L., Schmitt, A. D., Chabaux, F., Pokrovsky, O. S., Viers, J., Stille, P., Labolle, F., and Prokushkin, A. S.: Biogeochemistry of stable Ca and radiogenic Sr isotopes in larch-covered permafrost-dominated watersheds of Central Siberia, Geochim. Cosmochim. Ac., 114, 169–187, 2013.
Barker, A. J., Douglas, T. A., Jacobson, A. D., McClelland, J. W., Ilgen, A. G., Khosh, M. S., Lehn, G. O., and Trainor, T. P.: Late season mobilization of trace metals in two small Alaskan arctic watersheds as a proxy for landscape scale permafrost active layer dynamics, Chem. Geol., 381, 180–193, 2014.
Batuev, V. I.: Formation of water runoff from mound bogs (case study of Western Siberia), TSPU Bulletin, 122, 146–152, 2012.
Beaulieu, E., Godderis, Y., Donnadieu, Y., Labat, D., and Roelandt, C.: High sensitivity of the continental-weathering carbon dioxide sink to future climate change, Nat. Clim. Change, 2, 346–349, 2012.
Beilman, D. W., MacDonald, G. M., Smith, L. C., and Reimer, P. J.: Carbon accumulation in peatlands of West Siberia over the last 2000 years, Global Biogeochem. Cy., 23, GB1012, https://doi.org/10.1029/2007GB003112, 2009.
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We collected peat porewaters across a 640 km latitudinal transect of sporadic to continuous permafrost zone and analyzed organic carbon and trace metals. There was no distinct decrease in concentration along the latitudinal transect from 62.2° N to 67.4° N. The northward migration of the permafrost boundary or the change of hydrological regime is unlikely to modify chemical composition of peat porewater fluids larger than their natural variation within different micro-landscapes.
We collected peat porewaters across a 640 km latitudinal transect of sporadic to continuous...
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