Articles | Volume 17, issue 1
https://doi.org/10.5194/bg-17-89-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-89-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
07 Jan 2020
Research article |
| 07 Jan 2020
| 07 Jan 2020
Anoxic conditions maintained high phosphorus sorption in humid tropical forest soils
Yang Lin
CORRESPONDING AUTHOR
Department of Environmental Science, Policy, and Management, University of
California, Berkeley, CA 94720, USA
Avner Gross
Department of Environmental Science, Policy, and Management, University of
California, Berkeley, CA 94720, USA
current address: Department of Geography and Environmental
Development, Ben-Gurion University of the Negev, Beersheba, Israel
Christine S. O'Connell
Department of Environmental Science, Policy, and Management, University of
California, Berkeley, CA 94720, USA
Whendee L. Silver
Department of Environmental Science, Policy, and Management, University of
California, Berkeley, CA 94720, USA
Related authors
No articles found.
William R. Wieder, Derek Pierson, Stevan Earl, Kate Lajtha, Sara G. Baer, Ford Ballantyne, Asmeret Asefaw Berhe, Sharon A. Billings, Laurel M. Brigham, Stephany S. Chacon, Jennifer Fraterrigo, Serita D. Frey, Katerina Georgiou, Marie-Anne de Graaff, A. Stuart Grandy, Melannie D. Hartman, Sarah E. Hobbie, Chris Johnson, Jason Kaye, Emily Kyker-Snowman, Marcy E. Litvak, Michelle C. Mack, Avni Malhotra, Jessica A. M. Moore, Knute Nadelhoffer, Craig Rasmussen, Whendee L. Silver, Benjamin N. Sulman, Xanthe Walker, and Samantha Weintraub
Earth Syst. Sci. Data, 13, 1843–1854, https://doi.org/10.5194/essd-13-1843-2021, https://doi.org/10.5194/essd-13-1843-2021, 2021
Short summary
Short summary
Data collected from research networks present opportunities to test theories and develop models about factors responsible for the long-term persistence and vulnerability of soil organic matter (SOM). Here we present the SOils DAta Harmonization database (SoDaH), a flexible database designed to harmonize diverse SOM datasets from multiple research networks.
Debjani Sihi, Xiaofeng Xu, Mónica Salazar Ortiz, Christine S. O'Connell, Whendee L. Silver, Carla López-Lloreda, Julia M. Brenner, Ryan K. Quinn, Jana R. Phillips, Brent D. Newman, and Melanie A. Mayes
Biogeosciences, 18, 1769–1786, https://doi.org/10.5194/bg-18-1769-2021, https://doi.org/10.5194/bg-18-1769-2021, 2021
Short summary
Short summary
Humid tropical soils are important sources and sinks of methane. We used model simulation to understand how different kinds of microbes and observed soil moisture and oxygen dynamics contribute to production and consumption of methane along a wet tropical hillslope during normal and drought conditions. Drought alters the diffusion of oxygen and microbial substrates into and out of soil microsites, resulting in enhanced methane release from the entire hillslope during drought recovery.
Yang Lin, Ashley N. Campbell, Amrita Bhattacharyya, Nicole DiDonato, Allison M. Thompson, Malak M. Tfaily, Peter S. Nico, Whendee L. Silver, and Jennifer Pett-Ridge
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-59, https://doi.org/10.5194/bg-2020-59, 2020
Manuscript not accepted for further review
Short summary
Short summary
Soils in tropical forests play an important role of breaking down dead plant tissue and returning carbon to the atmosphere. This process is previously thought to be regulated soil oxygen level. However, we found that the break-down of new plant carbon by soils did not depend on oxygen. Even without oxygen, some soil microbes can use plant carbons in the forms like sugar and protein. Once these compounds were exhausted, oxygen limitation became to influence organic matter break-down.
Daniel D. Richter, Sharon A. Billings, Peter M. Groffman, Eugene F. Kelly, Kathleen A. Lohse, William H. McDowell, Timothy S. White, Suzanne Anderson, Dennis D. Baldocchi, Steve Banwart, Susan Brantley, Jean J. Braun, Zachary S. Brecheisen, Charles W. Cook, Hilairy E. Hartnett, Sarah E. Hobbie, Jerome Gaillardet, Esteban Jobbagy, Hermann F. Jungkunst, Clare E. Kazanski, Jagdish Krishnaswamy, Daniel Markewitz, Katherine O'Neill, Clifford S. Riebe, Paul Schroeder, Christina Siebe, Whendee L. Silver, Aaron Thompson, Anne Verhoef, and Ganlin Zhang
Biogeosciences, 15, 4815–4832, https://doi.org/10.5194/bg-15-4815-2018, https://doi.org/10.5194/bg-15-4815-2018, 2018
Short summary
Short summary
As knowledge in biology and geology explodes, science becomes increasingly specialized. Given the overlap of the environmental sciences, however, the explosion in knowledge inevitably creates opportunities for interconnecting the biogeosciences. Here, 30 scientists emphasize the opportunities for biogeoscience collaborations across the world’s remarkable long-term environmental research networks that can advance science and engage larger scientific and public audiences.
Wendy H. Yang and Whendee L. Silver
Biogeosciences, 13, 1705–1715, https://doi.org/10.5194/bg-13-1705-2016, https://doi.org/10.5194/bg-13-1705-2016, 2016
Short summary
Short summary
Nitrous oxide and methane are potent greenhouse gases that are both produced and consumed in soil. Using stable isotope tracers, we found that 68 % of nitrous oxide produced in soil was emitted to the atmosphere throughout the growing season in a cornfield despite variable soil conditions. Gross methane production and consumption were tightly coupled, resulting in near-zero net fluxes. Our results challenge our understanding of controls on nitrous oxide and methane dynamics in upland soils.
S. J Hall, G. McNicol, T. Natake, and W. L. Silver
Biogeosciences, 12, 2471–2487, https://doi.org/10.5194/bg-12-2471-2015, https://doi.org/10.5194/bg-12-2471-2015, 2015
Short summary
Short summary
We used measurements of radiocarbon to model the decomposition of organic matter associated with minerals in tropical rainforest soils, using contemporary and archived samples. Most organic matter decomposed over 11 to 26 years, while a smaller portion decomposed over centuries. Rates were similar among soils with strongly differing physical and chemical properties, but declined with a proxy for oxygen limitation. Previous models based on one time point may underestimate decomposition rates.
Related subject area
Biogeochemistry: Soils
Vegetation patterns associated with nutrient availability and supply in high-elevation tropical Andean ecosystems
Technical note: An open-source, low-cost system for continuous monitoring of low nitrate concentrations in soil and open water
Long-term fertilization increases soil but not plant or microbial N in a Chihuahuan Desert grassland
Factors controlling spatiotemporal variability of soil carbon accumulation and stock estimates in a tidal salt marsh
Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau
Technical Note: A validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis
Non-mycorrhizal root-associated fungi increase soil C stocks and stability via diverse mechanisms
Nine years of warming and nitrogen addition in the Tibetan grassland promoted loss of soil organic carbon but did not alter the bulk change in chemical structure
Diverse organic carbon dynamics captured by radiocarbon analysis of distinct compound classes in a grassland soil
Soil priming effects and involved microbial community along salt gradients
Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification
Ecosystem-specific patterns and drivers of global reactive iron mineral-associated organic carbon
Dark septate endophytic fungi associated with pioneer grass inhabiting volcanic deposits and their functions in promoting plant growth
Global patterns and drivers of phosphorus fractions in natural soils
Reviews and syntheses: Iron – a driver of nitrogen bioavailability in soils?
The Effects of Land Use on Soil Carbon Stocks in the UK
How well does ramped thermal oxidation quantify the age distribution of soil carbon? Assessing thermal stability of physically and chemically fractionated soil organic matter
Differential temperature sensitivity of intracellular metabolic processes and extracellular soil enzyme activities
Mapping soil organic carbon fractions for Australia, their stocks, and uncertainty
Technical note: The recovery rate of free particulate organic matter from soil samples is strongly affected by the method of density fractionation
Deforestation for agriculture leads to soil warming and enhanced litter decomposition in subarctic soils
Temperature sensitivity of soil organic carbon respiration along a forested elevation gradient in the Rwenzori Mountains, Uganda
The influence of elevated CO2 and soil depth on rhizosphere activity and nutrient availability in a mature Eucalyptus woodland
The paradox of assessing greenhouse gases from soils for nature-based solutions
Management-induced changes in soil organic carbon on global croplands
Pore network modeling as a new tool for determining gas diffusivity in peat
Temperature sensitivity of dark CO2 fixation in temperate forest soils
Effects of precipitation seasonality, irrigation, vegetation cycle and soil type on enhanced weathering – modeling of cropland case studies across four sites
Stable isotope profiles of soil organic carbon in forested and grassland landscapes in the Lake Alaotra basin (Madagascar): insights in past vegetation changes
Reviews and syntheses: The promise of big diverse soil data, moving current practices towards future potential
Dynamics of rare earth elements and associated major and trace elements during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation
To what extent can soil moisture and soil Cu contamination stresses affect nitrous species emissions? Estimation through calibration of a nitrification–denitrification model
Carbon, nitrogen, and phosphorus stoichiometry of organic matter in Swedish forest soils and its relationship with climate, tree species, and soil texture
Soil geochemistry as a driver of soil organic matter composition: insights from a soil chronosequence
Leaching of inorganic and organic phosphorus and nitrogen in contrasting beech forest soils – seasonal patterns and effects of fertilization
Age and chemistry of dissolved organic carbon reveal enhanced leaching of ancient labile carbon at the permafrost thaw zone
Soil organic carbon stabilization mechanisms and temperature sensitivity in old terraced soils
Effect of organic carbon addition on paddy soil organic carbon decomposition under different irrigation regimes
Soil profile connectivity can impact microbial substrate use, affecting how soil CO2 effluxes are controlled by temperature
Additional carbon inputs to reach a 4 per 1000 objective in Europe: feasibility and projected impacts of climate change based on Century simulations of long-term arable experiments
Cycling and retention of nitrogen in European beech (Fagus sylvatica L.) ecosystems under elevated fructification frequency
Mercury mobility, colloid formation and methylation in a polluted Fluvisol as affected by manure application and flooding–draining cycle
Simulating measurable ecosystem carbon and nitrogen dynamics with the mechanistically defined MEMS 2.0 model
Similar importance of edaphic and climatic factors for controlling soil organic carbon stocks of the world
Representing methane emissions from wet tropical forest soils using microbial functional groups constrained by soil diffusivity
Long-term bare-fallow soil fractions reveal thermo-chemical properties controlling soil organic carbon dynamics
Geochemical zones and environmental gradients for soils from the central Transantarctic Mountains, Antarctica
Age distribution, extractability, and stability of mineral-bound organic carbon in central European soils
Denitrification in soil as a function of oxygen availability at the microscale
Key drivers of pyrogenic carbon redistribution during a simulated rainfall event
Armando Molina, Veerle Vanacker, Oliver Chadwick, Santiago Zhiminaicela, Marife Corre, and Edzo Veldkamp
Biogeosciences, 21, 3075–3091, https://doi.org/10.5194/bg-21-3075-2024, https://doi.org/10.5194/bg-21-3075-2024, 2024
Short summary
Short summary
The tropical Andes contains unique landscapes where forest patches are surrounded by tussock grasses and cushion-forming plants. The aboveground vegetation composition informs us about belowground nutrient availability: patterns in plant-available nutrients resulted from strong biocycling of cations and removal of soil nutrients by plant uptake or leaching. Future changes in vegetation distribution will affect soil water and solute fluxes and the aquatic ecology of Andean rivers and lakes.
Sahiti Bulusu, Cristina Prieto García, Helen E. Dahlke, and Elad Levintal
Biogeosciences, 21, 3007–3013, https://doi.org/10.5194/bg-21-3007-2024, https://doi.org/10.5194/bg-21-3007-2024, 2024
Short summary
Short summary
Do-it-yourself hardware is a new way to improve measurement resolution. We present a low-cost, automated system for field measurements of low nitrate concentrations in soil porewater and open water bodies. All data hardware components cost USD 1100, which is much cheaper than other available commercial solutions. We provide the complete building guide to reduce technical barriers, which we hope will allow easier reproducibility and set up new soil and environmental monitoring applications.
Violeta Mendoza-Martinez, Scott L. Collins, and Jennie R. McLaren
Biogeosciences, 21, 2655–2667, https://doi.org/10.5194/bg-21-2655-2024, https://doi.org/10.5194/bg-21-2655-2024, 2024
Short summary
Short summary
We examine the impacts of multi-decadal nitrogen additions on a dryland ecosystem N budget, including the soil, microbial, and plant N pools. After 26 years, there appears to be little impact on the soil microbial or plant community and only minimal increases in N pools within the soil. While perhaps encouraging from a conservation standpoint, we calculate that greater than 95 % of the nitrogen added to the system is not retained and is instead either lost deeper in the soil or emitted as gas.
Sean Fettrow, Andrew Wozniak, Holly A. Michael, and Angelia L. Seyfferth
Biogeosciences, 21, 2367–2384, https://doi.org/10.5194/bg-21-2367-2024, https://doi.org/10.5194/bg-21-2367-2024, 2024
Short summary
Short summary
Salt marshes play a big role in global carbon (C) storage, and C stock estimates are used to predict future changes. However, spatial and temporal gradients in C burial rates over the landscape exist due to variations in water inundation, dominant plant species and stage of growth, and tidal action. We quantified soil C concentrations in soil cores across time and space beside several porewater biogeochemical variables and discussed the controls on variability in soil C in salt marsh ecosystems.
Andrés Tangarife-Escobar, Georg Guggenberger, Xiaojuan Feng, Guohua Dai, Carolina Urbina-Malo, Mina Azizi-Rad, and Carlos A. Sierra
Biogeosciences, 21, 1277–1299, https://doi.org/10.5194/bg-21-1277-2024, https://doi.org/10.5194/bg-21-1277-2024, 2024
Short summary
Short summary
Soil organic matter stability depends on future temperature and precipitation scenarios. We used radiocarbon (14C) data and model predictions to understand how the transit time of carbon varies under environmental change in grasslands and peatlands. Soil moisture affected the Δ14C of peatlands, while temperature did not have any influence. Our models show the correspondence between Δ14C and transit time and could allow understanding future interactions between terrestrial and atmospheric carbon
Marija Stojanova, Pierre Arbelet, François Baudin, Nicolas Bouton, Giovanni Caria, Lorenza Pacini, Nicolas Proix, Edouard Quibel, Achille Thin, and Pierre Barré
EGUsphere, https://doi.org/10.5194/egusphere-2024-578, https://doi.org/10.5194/egusphere-2024-578, 2024
Short summary
Short summary
Because of its importance for climate regulation and soil health, many studies are focusing on carbon dynamics in soils. However, quantifying organic and inorganic carbon remains an issue in carbonated soils. In this technical note, we propose a validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis. With this correction, Rock-Eval® method has the potential to become the standard method for quantifying carbon in carbonate soils.
Emiko K. Stuart, Laura Castañeda-Gómez, Wolfram Buss, Jeff R. Powell, and Yolima Carrillo
Biogeosciences, 21, 1037–1059, https://doi.org/10.5194/bg-21-1037-2024, https://doi.org/10.5194/bg-21-1037-2024, 2024
Short summary
Short summary
We inoculated wheat plants with various types of fungi whose impacts on soil carbon are poorly understood. After several months of growth, we examined both their impacts on soil carbon and the underlying mechanisms using multiple methods. Overall the fungi benefitted the storage of carbon in soil, mainly by improving the stability of pre-existing carbon, but several pathways were involved. This study demonstrates their importance for soil carbon storage and, therefore, climate change mitigation.
Huimin Sun, Michael W. I. Schmidt, Jintao Li, Jinquan Li, Xiang Liu, Nicholas O. E. Ofiti, Shurong Zhou, and Ming Nie
Biogeosciences, 21, 575–589, https://doi.org/10.5194/bg-21-575-2024, https://doi.org/10.5194/bg-21-575-2024, 2024
Short summary
Short summary
A soil organic carbon (SOC) molecular structure suggested that the easily decomposable and stabilized SOC is similarly affected after 9-year warming and N treatments despite large changes in SOC stocks. Given the long residence time of some SOC, the similar loss of all measurable chemical forms of SOC under global change treatments could have important climate consequences.
Katherine E. Grant, Marisa N. Repasch, Kari M. Finstad, Julia D. Kerr, Maxwell A. T. Marple, Christopher J. Larson, Taylor A. B. Broek, Jennifer Pett-Ridge, and Karis J. McFarlane
EGUsphere, https://doi.org/10.5194/egusphere-2023-3125, https://doi.org/10.5194/egusphere-2023-3125, 2024
Short summary
Short summary
Soils store organic carbon composed of different compounds from plants and microbes that stays in the soils for different lengths of time. To understand this process, we measure the time each carbon fraction is in a grassland soil profile. Our results show that the length of time each individual soil fraction is in our soil changes. Our approach allows a detailed look at the different components in soils. This study can help improve our understanding of soil dynamics.
Haoli Zhang, Doudou Chang, Zhifeng Zhu, Chunmei Meng, and Kaiyong Wang
Biogeosciences, 21, 1–11, https://doi.org/10.5194/bg-21-1-2024, https://doi.org/10.5194/bg-21-1-2024, 2024
Short summary
Short summary
Soil salinity mediates microorganisms and soil processes like soil organic carbon (SOC) cycling. We observed that negative priming effects at the early stages might be due to the preferential utilization of cottonseed meal. The positive priming that followed decreased with the increase in salinity.
Joséphine Hazera, David Sebag, Isabelle Kowalewski, Eric Verrecchia, Herman Ravelojaona, and Tiphaine Chevallier
Biogeosciences, 20, 5229–5242, https://doi.org/10.5194/bg-20-5229-2023, https://doi.org/10.5194/bg-20-5229-2023, 2023
Short summary
Short summary
This study adapts the Rock-Eval® protocol to quantify soil organic carbon (SOC) and soil inorganic carbon (SIC) on a non-pretreated soil aliquot. The standard protocol properly estimates SOC contents once the TOC parameter is corrected. However, it cannot complete the thermal breakdown of SIC amounts > 4 mg, leading to an underestimation of high SIC contents by the MinC parameter, even after correcting for this. Thus, the final oxidation isotherm is extended to 7 min to quantify any SIC amount.
Bo Zhao, Amin Dou, Zhiwei Zhang, Zhenyu Chen, Wenbo Sun, Yanli Feng, Xiaojuan Wang, and Qiang Wang
Biogeosciences, 20, 4761–4774, https://doi.org/10.5194/bg-20-4761-2023, https://doi.org/10.5194/bg-20-4761-2023, 2023
Short summary
Short summary
This study provided a comprehensive analysis of the spatial variability and determinants of Fe-bound organic carbon (Fe-OC) among terrestrial, wetland, and marine ecosystems and its governing factors globally. We illustrated that reactive Fe was not only an important sequestration mechanism for OC in terrestrial ecosystems but also an effective “rusty sink” of OC preservation in wetland and marine ecosystems, i.e., a key factor for long-term OC storage in global ecosystems.
Han Sun, Tomoyasu Nishizawa, Hiroyuki Ohta, and Kazuhiko Narisawa
Biogeosciences, 20, 4737–4749, https://doi.org/10.5194/bg-20-4737-2023, https://doi.org/10.5194/bg-20-4737-2023, 2023
Short summary
Short summary
In this research, we assessed the diversity and function of the dark septate endophytic (DSE) fungi community associated with Miscanthus condensatus root in volcanic ecosystems. Both metabarcoding and isolation were adopted in this study. We further validated effects on plant growth by inoculation of some core DSE isolates. This study helps improve our understanding of the role of Miscanthus condensatus-associated DSE fungi during the restoration of post-volcanic ecosystems.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Ying-Ping Wang, Julian Helfenstein, Yuanyuan Huang, and Enqing Hou
Biogeosciences, 20, 4147–4163, https://doi.org/10.5194/bg-20-4147-2023, https://doi.org/10.5194/bg-20-4147-2023, 2023
Short summary
Short summary
We identified total soil P concentration as the most important predictor of all soil P pool concentrations, except for primary mineral P concentration, which is primarily controlled by soil pH and only secondarily by total soil P concentration. We predicted soil P pools’ distributions in natural systems, which can inform assessments of the role of natural P availability for ecosystem productivity, climate change mitigation, and the functioning of the Earth system.
Imane Slimani, Xia Zhu-Barker, Patricia Lazicki, and William Horwath
Biogeosciences, 20, 3873–3894, https://doi.org/10.5194/bg-20-3873-2023, https://doi.org/10.5194/bg-20-3873-2023, 2023
Short summary
Short summary
There is a strong link between nitrogen availability and iron minerals in soils. These minerals have multiple outcomes for nitrogen availability depending on soil conditions and properties. For example, iron can limit microbial degradation of nitrogen in aerated soils but has opposing outcomes in non-aerated soils. This paper focuses on the multiple ways iron can affect nitrogen bioavailability in soils.
Peter Levy, Laura Bentley, Bridget Emmett, Angus Garbutt, Aidan Keith, Inma Lebron, and David Robinson
EGUsphere, https://doi.org/10.5194/egusphere-2023-1681, https://doi.org/10.5194/egusphere-2023-1681, 2023
Short summary
Short summary
We collated a large data set (15790 soil cores) on soil carbon stock in different land uses. Soil carbon stocks were highest in woodlands and lowest in croplands. The variability in the effects were large. This has important implications for agri-environment schemes, seeking to sequester carbon in the soil by altering land use, because the effect of a given intervention is very hard to verify.
Shane W. Stoner, Marion Schrumpf, Alison Hoyt, Carlos A. Sierra, Sebastian Doetterl, Valier Galy, and Susan Trumbore
Biogeosciences, 20, 3151–3163, https://doi.org/10.5194/bg-20-3151-2023, https://doi.org/10.5194/bg-20-3151-2023, 2023
Short summary
Short summary
Soils store more carbon (C) than any other terrestrial C reservoir, but the processes that control how much C stays in soil, and for how long, are very complex. Here, we used a recent method that involves heating soil in the lab to measure the range of C ages in soil. We found that most C in soil is decades to centuries old, while some stays for much shorter times (days to months), and some is thousands of years old. Such detail helps us to estimate how soil C may react to changing climate.
Adetunji Alex Adekanmbi, Laurence Dale, Liz Shaw, and Tom Sizmur
Biogeosciences, 20, 2207–2219, https://doi.org/10.5194/bg-20-2207-2023, https://doi.org/10.5194/bg-20-2207-2023, 2023
Short summary
Short summary
The decomposition of soil organic matter and flux of carbon dioxide are expected to increase as temperatures rise. However, soil organic matter decomposition is a two-step process whereby large molecules are first broken down outside microbial cells and then respired within microbial cells. We show here that these two steps are not equally sensitive to increases in soil temperature and that global warming may cause a shift in the rate-limiting step from outside to inside the microbial cell.
Mercedes Román Dobarco, Alexandre M. J-C. Wadoux, Brendan Malone, Budiman Minasny, Alex B. McBratney, and Ross Searle
Biogeosciences, 20, 1559–1586, https://doi.org/10.5194/bg-20-1559-2023, https://doi.org/10.5194/bg-20-1559-2023, 2023
Short summary
Short summary
Soil organic carbon (SOC) is of a heterogeneous nature and varies in chemistry, stabilisation mechanisms, and persistence in soil. In this study we mapped the stocks of SOC fractions with different characteristics and turnover rates (presumably PyOC >= MAOC > POC) across Australia, combining spectroscopy and digital soil mapping. The SOC stocks (0–30 cm) were estimated as 13 Pg MAOC, 2 Pg POC, and 5 Pg PyOC.
Frederick Büks
Biogeosciences, 20, 1529–1535, https://doi.org/10.5194/bg-20-1529-2023, https://doi.org/10.5194/bg-20-1529-2023, 2023
Short summary
Short summary
Ultrasonication with density fractionation of soils is a commonly used method to separate soil organic matter pools, which is, e.g., important to calculate carbon turnover in landscapes. It is shown that the approach that merges soil and dense solution without mixing has a low recovery rate and causes co-extraction of parts of the retained labile pool along with the intermediate pool. An alternative method with high recovery rates and no cross-contamination was recommended.
Tino Peplau, Christopher Poeplau, Edward Gregorich, and Julia Schroeder
Biogeosciences, 20, 1063–1074, https://doi.org/10.5194/bg-20-1063-2023, https://doi.org/10.5194/bg-20-1063-2023, 2023
Short summary
Short summary
We buried tea bags and temperature loggers in a paired-plot design in soils under forest and agricultural land and retrieved them after 2 years to quantify the effect of land-use change on soil temperature and litter decomposition in subarctic agricultural systems. We could show that agricultural soils were on average 2 °C warmer than forests and that litter decomposition was enhanced. The results imply that deforestation amplifies effects of climate change on soil organic matter dynamics.
Joseph Okello, Marijn Bauters, Hans Verbeeck, Samuel Bodé, John Kasenene, Astrid Françoys, Till Engelhardt, Klaus Butterbach-Bahl, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 20, 719–735, https://doi.org/10.5194/bg-20-719-2023, https://doi.org/10.5194/bg-20-719-2023, 2023
Short summary
Short summary
The increase in global and regional temperatures has the potential to drive accelerated soil organic carbon losses in tropical forests. We simulated climate warming by translocating intact soil cores from higher to lower elevations. The results revealed increasing temperature sensitivity and decreasing losses of soil organic carbon with increasing elevation. Our results suggest that climate warming may trigger enhanced losses of soil organic carbon from tropical montane forests.
Johanna Pihlblad, Louise C. Andresen, Catriona A. Macdonald, David S. Ellsworth, and Yolima Carrillo
Biogeosciences, 20, 505–521, https://doi.org/10.5194/bg-20-505-2023, https://doi.org/10.5194/bg-20-505-2023, 2023
Short summary
Short summary
Elevated CO2 in the atmosphere increases forest biomass productivity when growth is not limited by soil nutrients. This study explores how mature trees stimulate soil availability of nitrogen and phosphorus with free-air carbon dioxide enrichment after 5 years of fumigation. We found that both nutrient availability and processes feeding available pools increased in the rhizosphere, and phosphorus increased at depth. This appears to not be by decomposition but by faster recycling of nutrients.
Rodrigo Vargas and Van Huong Le
Biogeosciences, 20, 15–26, https://doi.org/10.5194/bg-20-15-2023, https://doi.org/10.5194/bg-20-15-2023, 2023
Short summary
Short summary
Quantifying the role of soils in nature-based solutions requires accurate estimates of soil greenhouse gas (GHG) fluxes. We suggest that multiple GHG fluxes should not be simultaneously measured at a few fixed time intervals, but an optimized sampling approach can reduce bias and uncertainty. Our results have implications for assessing GHG fluxes from soils and a better understanding of the role of soils in nature-based solutions.
Kristine Karstens, Benjamin Leon Bodirsky, Jan Philipp Dietrich, Marta Dondini, Jens Heinke, Matthias Kuhnert, Christoph Müller, Susanne Rolinski, Pete Smith, Isabelle Weindl, Hermann Lotze-Campen, and Alexander Popp
Biogeosciences, 19, 5125–5149, https://doi.org/10.5194/bg-19-5125-2022, https://doi.org/10.5194/bg-19-5125-2022, 2022
Short summary
Short summary
Soil organic carbon (SOC) has been depleted by anthropogenic land cover change and agricultural management. While SOC models often simulate detailed biochemical processes, the management decisions are still little investigated at the global scale. We estimate that soils have lost around 26 GtC relative to a counterfactual natural state in 1975. Yet, since 1975, SOC has been increasing again by 4 GtC due to a higher productivity, recycling of crop residues and manure, and no-tillage practices.
Petri Kiuru, Marjo Palviainen, Arianna Marchionne, Tiia Grönholm, Maarit Raivonen, Lukas Kohl, and Annamari Laurén
Biogeosciences, 19, 5041–5058, https://doi.org/10.5194/bg-19-5041-2022, https://doi.org/10.5194/bg-19-5041-2022, 2022
Short summary
Short summary
Peatlands are large carbon stocks. Emissions of carbon dioxide and methane from peatlands may increase due to changes in management and climate. We studied the variation in the gas diffusivity of peat with depth using pore network simulations and laboratory experiments. Gas diffusivity was found to be lower in deeper peat with smaller pores and lower pore connectivity. However, gas diffusivity was not extremely low in wet conditions, which may reflect the distinctive structure of peat.
Rachael Akinyede, Martin Taubert, Marion Schrumpf, Susan Trumbore, and Kirsten Küsel
Biogeosciences, 19, 4011–4028, https://doi.org/10.5194/bg-19-4011-2022, https://doi.org/10.5194/bg-19-4011-2022, 2022
Short summary
Short summary
Soils will likely become warmer in the future, and this can increase the release of carbon dioxide (CO2) into the atmosphere. As microbes can take up soil CO2 and prevent further escape into the atmosphere, this study compares the rate of uptake and release of CO2 at two different temperatures. With warming, the rate of CO2 uptake increases less than the rate of release, indicating that the capacity to modulate soil CO2 release into the atmosphere will decrease under future warming.
Giuseppe Cipolla, Salvatore Calabrese, Amilcare Porporato, and Leonardo V. Noto
Biogeosciences, 19, 3877–3896, https://doi.org/10.5194/bg-19-3877-2022, https://doi.org/10.5194/bg-19-3877-2022, 2022
Short summary
Short summary
Enhanced weathering (EW) is a promising strategy for carbon sequestration. Since models may help to characterize field EW, the present work applies a hydro-biogeochemical model to four case studies characterized by different rainfall seasonality, vegetation and soil type. Rainfall seasonality strongly affects EW dynamics, but low carbon sequestration suggests that an in-depth analysis at the global scale is required to see if EW may be effective to mitigate climate change.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
Short summary
Short summary
In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Katherine E. O. Todd-Brown, Rose Z. Abramoff, Jeffrey Beem-Miller, Hava K. Blair, Stevan Earl, Kristen J. Frederick, Daniel R. Fuka, Mario Guevara Santamaria, Jennifer W. Harden, Katherine Heckman, Lillian J. Heran, James R. Holmquist, Alison M. Hoyt, David H. Klinges, David S. LeBauer, Avni Malhotra, Shelby C. McClelland, Lucas E. Nave, Katherine S. Rocci, Sean M. Schaeffer, Shane Stoner, Natasja van Gestel, Sophie F. von Fromm, and Marisa L. Younger
Biogeosciences, 19, 3505–3522, https://doi.org/10.5194/bg-19-3505-2022, https://doi.org/10.5194/bg-19-3505-2022, 2022
Short summary
Short summary
Research data are becoming increasingly available online with tantalizing possibilities for reanalysis. However harmonizing data from different sources remains challenging. Using the soils community as an example, we walked through the various strategies that researchers currently use to integrate datasets for reanalysis. We find that manual data transcription is still extremely common and that there is a critical need for community-supported informatics tools like vocabularies and ontologies.
Alessandro Montemagno, Christophe Hissler, Victor Bense, Adriaan J. Teuling, Johanna Ziebel, and Laurent Pfister
Biogeosciences, 19, 3111–3129, https://doi.org/10.5194/bg-19-3111-2022, https://doi.org/10.5194/bg-19-3111-2022, 2022
Short summary
Short summary
We investigated the biogeochemical processes that dominate the release and retention of elements (nutrients and potentially toxic elements) during litter degradation. Our results show that toxic elements are retained in the litter, while nutrients are released in solution during the first stages of degradation. This seems linked to the capability of trees to distribute the elements between degradation-resistant and non-degradation-resistant compounds of leaves according to their chemical nature.
Laura Sereni, Bertrand Guenet, Charlotte Blasi, Olivier Crouzet, Jean-Christophe Lata, and Isabelle Lamy
Biogeosciences, 19, 2953–2968, https://doi.org/10.5194/bg-19-2953-2022, https://doi.org/10.5194/bg-19-2953-2022, 2022
Short summary
Short summary
This study focused on the modellisation of two important drivers of soil greenhouse gas emissions: soil contamination and soil moisture change. The aim was to include a Cu function in the soil biogeochemical model DNDC for different soil moisture conditions and then to estimate variation in N2O, NO2 or NOx emissions. Our results show a larger effect of Cu on N2 and N2O emissions than on the other nitrogen species and a higher effect for the soils incubated under constant constant moisture.
Marie Spohn and Johan Stendahl
Biogeosciences, 19, 2171–2186, https://doi.org/10.5194/bg-19-2171-2022, https://doi.org/10.5194/bg-19-2171-2022, 2022
Short summary
Short summary
We explored the ratios of carbon (C), nitrogen (N), and phosphorus (P) of organic matter in Swedish forest soils. The N : P ratio of the organic layer was most strongly related to the mean annual temperature, while the C : N ratios of the organic layer and mineral soil were strongly related to tree species even in the subsoil. The organic P concentration in the mineral soil was strongly affected by soil texture, which diminished the effect of tree species on the C to organic P (C : OP) ratio.
Moritz Mainka, Laura Summerauer, Daniel Wasner, Gina Garland, Marco Griepentrog, Asmeret Asefaw Berhe, and Sebastian Doetterl
Biogeosciences, 19, 1675–1689, https://doi.org/10.5194/bg-19-1675-2022, https://doi.org/10.5194/bg-19-1675-2022, 2022
Short summary
Short summary
The largest share of terrestrial carbon is stored in soils, making them highly relevant as regards global change. Yet, the mechanisms governing soil carbon stabilization are not well understood. The present study contributes to a better understanding of these processes. We show that qualitative changes in soil organic matter (SOM) co-vary with alterations of the soil matrix following soil weathering. Hence, the type of SOM that is stabilized in soils might change as soils develop.
Jasmin Fetzer, Emmanuel Frossard, Klaus Kaiser, and Frank Hagedorn
Biogeosciences, 19, 1527–1546, https://doi.org/10.5194/bg-19-1527-2022, https://doi.org/10.5194/bg-19-1527-2022, 2022
Short summary
Short summary
As leaching is a major pathway of nitrogen and phosphorus loss in forest soils, we investigated several potential drivers in two contrasting beech forests. The composition of leachates, obtained by zero-tension lysimeters, varied by season, and climatic extremes influenced the magnitude of leaching. Effects of nitrogen and phosphorus fertilization varied with soil nutrient status and sorption properties, and leaching from the low-nutrient soil was more sensitive to environmental factors.
Karis J. McFarlane, Heather M. Throckmorton, Jeffrey M. Heikoop, Brent D. Newman, Alexandra L. Hedgpeth, Marisa N. Repasch, Thomas P. Guilderson, and Cathy J. Wilson
Biogeosciences, 19, 1211–1223, https://doi.org/10.5194/bg-19-1211-2022, https://doi.org/10.5194/bg-19-1211-2022, 2022
Short summary
Short summary
Planetary warming is increasing seasonal thaw of permafrost, making this extensive old carbon stock vulnerable. In northern Alaska, we found more and older dissolved organic carbon in small drainages later in summer as more permafrost was exposed by deepening thaw. Younger and older carbon did not differ in chemical indicators related to biological lability suggesting this carbon can cycle through aquatic systems and contribute to greenhouse gas emissions as warming increases permafrost thaw.
Pengzhi Zhao, Daniel Joseph Fallu, Sara Cucchiaro, Paolo Tarolli, Clive Waddington, David Cockcroft, Lisa Snape, Andreas Lang, Sebastian Doetterl, Antony G. Brown, and Kristof Van Oost
Biogeosciences, 18, 6301–6312, https://doi.org/10.5194/bg-18-6301-2021, https://doi.org/10.5194/bg-18-6301-2021, 2021
Short summary
Short summary
We investigate the factors controlling the soil organic carbon (SOC) stability and temperature sensitivity of abandoned prehistoric agricultural terrace soils. Results suggest that the burial of former topsoil due to terracing provided an SOC stabilization mechanism. Both the soil C : N ratio and SOC mineral protection regulate soil SOC temperature sensitivity. However, which mechanism predominantly controls SOC temperature sensitivity depends on the age of the buried terrace soils.
Heleen Deroo, Masuda Akter, Samuel Bodé, Orly Mendoza, Haichao Li, Pascal Boeckx, and Steven Sleutel
Biogeosciences, 18, 5035–5051, https://doi.org/10.5194/bg-18-5035-2021, https://doi.org/10.5194/bg-18-5035-2021, 2021
Short summary
Short summary
We assessed if and how incorporation of exogenous organic carbon (OC) such as straw could affect decomposition of native soil organic carbon (SOC) under different irrigation regimes. Addition of exogenous OC promoted dissolution of native SOC, partly because of increased Fe reduction, leading to more net release of Fe-bound SOC. Yet, there was no proportionate priming of SOC-derived DOC mineralisation. Water-saving irrigation can retard both priming of SOC dissolution and mineralisation.
Frances A. Podrebarac, Sharon A. Billings, Kate A. Edwards, Jérôme Laganière, Matthew J. Norwood, and Susan E. Ziegler
Biogeosciences, 18, 4755–4772, https://doi.org/10.5194/bg-18-4755-2021, https://doi.org/10.5194/bg-18-4755-2021, 2021
Short summary
Short summary
Soil respiration is a large and temperature-responsive flux in the global carbon cycle. We found increases in microbial use of easy to degrade substrates enhanced the temperature response of respiration in soils layered as they are in situ. This enhanced response is consistent with soil composition differences in warm relative to cold climate forests. These results highlight the importance of the intact nature of soils rarely studied in regulating responses of CO2 fluxes to changing temperature.
Elisa Bruni, Bertrand Guenet, Yuanyuan Huang, Hugues Clivot, Iñigo Virto, Roberta Farina, Thomas Kätterer, Philippe Ciais, Manuel Martin, and Claire Chenu
Biogeosciences, 18, 3981–4004, https://doi.org/10.5194/bg-18-3981-2021, https://doi.org/10.5194/bg-18-3981-2021, 2021
Short summary
Short summary
Increasing soil organic carbon (SOC) stocks is beneficial for climate change mitigation and food security. One way to enhance SOC stocks is to increase carbon input to the soil. We estimate the amount of carbon input required to reach a 4 % annual increase in SOC stocks in 14 long-term agricultural experiments around Europe. We found that annual carbon input should increase by 43 % under current temperature conditions, by 54 % for a 1 °C warming scenario and by 120 % for a 5 °C warming scenario.
Rainer Brumme, Bernd Ahrends, Joachim Block, Christoph Schulz, Henning Meesenburg, Uwe Klinck, Markus Wagner, and Partap K. Khanna
Biogeosciences, 18, 3763–3779, https://doi.org/10.5194/bg-18-3763-2021, https://doi.org/10.5194/bg-18-3763-2021, 2021
Short summary
Short summary
In order to study the fate of litter nitrogen in forest soils, we combined a leaf litterfall exchange experiment using 15N-labeled leaf litter with long-term element budgets at seven European beech sites in Germany. It appears that fructification intensity, which has increased in recent decades, has a distinct impact on N retention in forest soils. Despite reduced nitrogen deposition, about 6 and 10 kg ha−1 of nitrogen were retained annually in the soils and in the forest stands, respectively.
Lorenz Gfeller, Andrea Weber, Isabelle Worms, Vera I. Slaveykova, and Adrien Mestrot
Biogeosciences, 18, 3445–3465, https://doi.org/10.5194/bg-18-3445-2021, https://doi.org/10.5194/bg-18-3445-2021, 2021
Short summary
Short summary
Our incubation experiment shows that flooding of polluted floodplain soils may induce pulses of both mercury (Hg) and methylmercury to the soil solution and threaten downstream ecosystems. We demonstrate that mobilization of Hg bound to manganese oxides is a relevant process in organic-matter-poor soils. Addition of organic amendments accelerates this mobilization but also facilitates the formation of nanoparticulate Hg and the subsequent fixation of Hg from soil solution to the soil.
Yao Zhang, Jocelyn M. Lavallee, Andy D. Robertson, Rebecca Even, Stephen M. Ogle, Keith Paustian, and M. Francesca Cotrufo
Biogeosciences, 18, 3147–3171, https://doi.org/10.5194/bg-18-3147-2021, https://doi.org/10.5194/bg-18-3147-2021, 2021
Short summary
Short summary
Soil organic matter (SOM) is essential for the health of soils, and the accumulation of SOM helps removal of CO2 from the atmosphere. Here we present the result of the continued development of a mathematical model that simulates SOM and its measurable fractions. In this study, we simulated several grassland sites in the US, and the model generally captured the carbon and nitrogen amounts in SOM and their distribution between the measurable fractions throughout the entire soil profile.
Zhongkui Luo, Raphael A. Viscarra-Rossel, and Tian Qian
Biogeosciences, 18, 2063–2073, https://doi.org/10.5194/bg-18-2063-2021, https://doi.org/10.5194/bg-18-2063-2021, 2021
Short summary
Short summary
Using the data from 141 584 whole-soil profiles across the globe, we disentangled the relative importance of biotic, climatic and edaphic variables in controlling global SOC stocks. The results suggested that soil properties and climate contributed similarly to the explained global variance of SOC in four sequential soil layers down to 2 m. However, the most important individual controls are consistently soil-related, challenging current climate-driven framework of SOC dynamics.
Debjani Sihi, Xiaofeng Xu, Mónica Salazar Ortiz, Christine S. O'Connell, Whendee L. Silver, Carla López-Lloreda, Julia M. Brenner, Ryan K. Quinn, Jana R. Phillips, Brent D. Newman, and Melanie A. Mayes
Biogeosciences, 18, 1769–1786, https://doi.org/10.5194/bg-18-1769-2021, https://doi.org/10.5194/bg-18-1769-2021, 2021
Short summary
Short summary
Humid tropical soils are important sources and sinks of methane. We used model simulation to understand how different kinds of microbes and observed soil moisture and oxygen dynamics contribute to production and consumption of methane along a wet tropical hillslope during normal and drought conditions. Drought alters the diffusion of oxygen and microbial substrates into and out of soil microsites, resulting in enhanced methane release from the entire hillslope during drought recovery.
Mathieu Chassé, Suzanne Lutfalla, Lauric Cécillon, François Baudin, Samuel Abiven, Claire Chenu, and Pierre Barré
Biogeosciences, 18, 1703–1718, https://doi.org/10.5194/bg-18-1703-2021, https://doi.org/10.5194/bg-18-1703-2021, 2021
Short summary
Short summary
Evolution of organic carbon content in soils could be a major driver of atmospheric greenhouse gas concentrations over the next century. Understanding factors controlling carbon persistence in soil is a challenge. Our study of unique long-term bare-fallow samples, depleted in labile organic carbon, helps improve the separation, evaluation and characterization of carbon pools with distinct residence time in soils and gives insight into the mechanisms explaining soil organic carbon persistence.
Melisa A. Diaz, Christopher B. Gardner, Susan A. Welch, W. Andrew Jackson, Byron J. Adams, Diana H. Wall, Ian D. Hogg, Noah Fierer, and W. Berry Lyons
Biogeosciences, 18, 1629–1644, https://doi.org/10.5194/bg-18-1629-2021, https://doi.org/10.5194/bg-18-1629-2021, 2021
Short summary
Short summary
Water-soluble salt and nutrient concentrations of soils collected along the Shackleton Glacier, Antarctica, show distinct geochemical gradients related to latitude, longitude, elevation, soil moisture, and distance from coast and glacier. Machine learning algorithms were used to estimate geochemical gradients for the region given the relationship with geography. Geography and surface exposure age drive salt and nutrient abundances, influencing invertebrate habitat suitability and biogeography.
Marion Schrumpf, Klaus Kaiser, Allegra Mayer, Günter Hempel, and Susan Trumbore
Biogeosciences, 18, 1241–1257, https://doi.org/10.5194/bg-18-1241-2021, https://doi.org/10.5194/bg-18-1241-2021, 2021
Short summary
Short summary
A large amount of organic carbon (OC) in soil is protected against decay by bonding to minerals. We studied the release of mineral-bonded OC by NaF–NaOH extraction and H2O2 oxidation. Unexpectedly, extraction and oxidation removed mineral-bonded OC at roughly constant portions and of similar age distributions, irrespective of mineral composition, land use, and soil depth. The results suggest uniform modes of interactions between OC and minerals across soils in quasi-steady state with inputs.
Lena Rohe, Bernd Apelt, Hans-Jörg Vogel, Reinhard Well, Gi-Mick Wu, and Steffen Schlüter
Biogeosciences, 18, 1185–1201, https://doi.org/10.5194/bg-18-1185-2021, https://doi.org/10.5194/bg-18-1185-2021, 2021
Short summary
Short summary
Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for different combinations of soils and water contents. Prediction accuracy of (N2O + N2) fluxes was highest with combined proxies for oxygen demand (CO2 flux) and oxygen supply (anaerobic soil volume fraction). Knowledge of denitrification completeness (product ratio) improved N2O predictions. Substitutions with cheaper proxies (soil organic matter, empirical diffusivity) reduced prediction accuracy.
Severin-Luca Bellè, Asmeret Asefaw Berhe, Frank Hagedorn, Cristina Santin, Marcus Schiedung, Ilja van Meerveld, and Samuel Abiven
Biogeosciences, 18, 1105–1126, https://doi.org/10.5194/bg-18-1105-2021, https://doi.org/10.5194/bg-18-1105-2021, 2021
Short summary
Short summary
Controls of pyrogenic carbon (PyC) redistribution under rainfall are largely unknown. However, PyC mobility can be substantial after initial rain in post-fire landscapes. We conducted a controlled simulation experiment on plots where PyC was applied on the soil surface. We identified redistribution of PyC by runoff and splash and vertical movement in the soil depending on soil texture and PyC characteristics (material and size). PyC also induced changes in exports of native soil organic carbon.
Cited articles
Appan, A. and Wang, H.: Sorption isotherms and kinetics of sediment
phosphorus in a tropical reservoir, J. Environ. Eng.,
126, 993-998, 2000.
Bache, B. W. and Williams, E. G.: A phosphate sorption index for soils,
J. Soil Sci., 22, 289–301, 1971.
Barcellos, D., Cyle, K. T., and Thompson, A.: Faster redox fluctuations can
lead to higher iron reduction rates in humid forest soils, Biogeochemistry, 137, 367–378,
https://doi.org/10.1007/s10533-018-0427-0, 2018.
Bhattacharyya, A., Campbell, A. N., Tfaily, M. M., Lin, Y., Kukkadapu, R.
K., Silver, W., Nico, P. S., and Pett-Ridge, J.: Redox fluctuations control
the coupled cycling of iron and carbon in tropical forest soils,
Environ. Sci. Technol., 52, 14129–14139, https://doi.org/10.1021/acs.est.8b03408, 2018.
Bolster, C. H. and Hornberger, G. M.: On the use of linearized Langmuir
equations, Soil Sci. Soc. Am. J., 71, 1796,
https://doi.org/10.2136/sssaj2006.0304, 2007.
Borch, T. and Fendorf, S.: Chapter 12 Phosphate Interactions with Iron
(Hydr)oxides: Mineralization Pathways and Phosphorus Retention upon
Bioreduction, Developments in Earth and Environmental Sciences, 7, 321–348,
https://doi.org/10.1016/S1571-9197(07)07012-7, 2007.
Borggaard, O. K., Jørgensen, S. S., Møberg, J. P., and Raben-Lange,
B.: Influence of organic matter on phosphate adsorption by aluminium and
iron oxides in sandy soils, J. Soil Sci., 41, 443–449,
https://doi.org/10.1111/j.1365-2389.1990.tb00078.x, 1990.
Brown, S., Lugo, A. E., Silander, S., and Liegel, L.: Research history and
opportunities in the Luquillo Experimental Forest, U.S. Department of
Agriculture Forest Service, General Technical Report SO-44, Southern Forest
Experiment Station, New Orleans, LA, 128 pp., 1983.
Camenzind, T., Hättenschwiler, S., Treseder, K. K., Lehmann, A., and
Rillig, M. C.: Nutrient limitation of soil microbial processes in tropical
forests, Ecol. Monogr., 88, 4–21, https://doi.org/10.1002/ecm.1279, 2017.
Chacón, N., Silver, W. L., Dubinsky, E. A., and Cusack, D. F.: Iron
reduction and soil phosphorus solubilization in humid tropical forests
soils: The roles of labile carbon pools and an electron shuttle compound,
Biogeochemistry, 78, 67–84, https://doi.org/10.1007/s10533-005-2343-3, 2006.
Chen, C., Meile, C., Wilmoth, J. L., Barcellos, D., and Thompson, A.:
Influence of pO2 on iron redox cycling and anaerobic organic carbon
mineralization in a humid tropical forest soil, Environ. Sci.
Technol., 52, 7709–7719, 2018.
Cleveland, C. C., Townsend, A. R., Taylor, P., Alvarez-Clare, S.,
Bustamante, M., Chuyong, G., Dobrowski, S. Z., Grierson, P., Harms, K. E.,
and Houlton, B. Z.: Relationships among net primary productivity, nutrients
and climate in tropical rain forest: a pan-tropical analysis, Ecol.
Lett., 14, 939–947, 2011.
Coward, E. K., Thompson, A. T., and Plante, A. F.: Iron-mediated
mineralogical control of organic matter accumulation in tropical soils,
Geoderma, 306, 206–216, https://doi.org/10.1016/j.geoderma.2017.07.026, 2017.
DeAngelis, K. M., Silver, W. L., Thompson, A. W., and Firestone, M. K.:
Microbial communities acclimate to recurring changes in soil redox potential
status, Environ. Microbiol., 12, 3137–3149,
https://doi.org/10.1111/j.1462-2920.2010.02286.x, 2010.
de Campos, M., Antonangelo, J. A., and Alleoni, L. R. F.: Phosphorus
sorption index in humid tropical soils, Soil Till. Res., 156,
110–118, https://doi.org/10.1016/j.still.2015.09.020, 2016.
Dubinsky, E. A., Silver, W. L., and Firestone, M. K.: Tropical forest soil
microbial communities couple iron and carbon biogeochemistry, Ecology, 91,
2604–2612, https://doi.org/10.1890/09-1365.1, 2010.
Gérard, F.: Clay minerals, iron/aluminum oxides, and their contribution
to phosphate sorption in soils – A myth revisited, Geoderma, 262, 213–226,
https://doi.org/10.1016/j.geoderma.2015.08.036, 2016.
Gross, A., Pett-Ridge, J., and Silver, W.: Soil Oxygen Limits Microbial
Phosphorus Utilization in Humid Tropical Forest Soils, Soil Systems, 2, 65,
https://doi.org/10.3390/soilsystems2040065, 2018.
Gustafsson, J. P.: Visual MINTEQ 3.1 user guide. KTH, Department of Land and
Water Recources, Stockholm, Sweden, available at:
https://vminteq.lwr.kth.se/ (last access: 22 July 2019), 2015.
Gustafsson, J. P., Mwamila, L. B., and Kergoat, K.: The pH dependence of
phosphate sorption and desorption in Swedish agricultural soils, Geoderma,
189–190, 304–311, https://doi.org/10.1016/j.geoderma.2012.05.014, 2012.
Hall, S. J. and Silver, W. L.: Reducing conditions, reactive metals, and
their interactions can explain spatial patterns of surface soil carbon in a
humid tropical forest, Biogeochemistry, 125, 149–165,
https://doi.org/10.1007/s10533-015-0120-5, 2015.
Haynes, R. J.: Effects of liming on phosphate availability in acid soils,
Plant Soil, 68, 289–308, https://doi.org/10.1007/BF02197935, 1982.
Haynes, R. J. and Swift, R. S.: The effects of pH and drying on adsorption
of phosphate by aluminium-organic matter associations, J. Soil Sci., 40, 773–781, https://doi.org/10.1111/j.1365-2389.1989.tb01317.x, 1989.
Hedley, M. J., Stewart, J. W. B., and Chauhan, B.: Changes in inorganic and
organic soil phosphorus fractions induced by cultivation practices and by
laboratory incubations, Soil Sci. Soc. Am. J., 46,
970–976, 1982.
Heiberg, L., Koch, C. B., Kjaergaard, C., Jensen, H. S., and Hans Christian,
B. H.: Vivianite precipitation and phosphate sorption following iron
reduction in anoxic soils, J. Environ. Qual., 41, 938–949,
https://doi.org/10.2134/jeq2011.0067, 2012.
Henry, P. C. and Smith, M. F.: Two-step approach to determining some useful
phosphorus characteristics of South African soils: a review of work done at
the ARC-Institute for Soil, Climate and Water, South African Journal of
Plant and Soil, 23, 64–72, 2006.
Holford, I. C. R. and Patrick, W. H.: Effects of reduction and pH changes
on phosphate sorption and mobility in an acid soil, Soil Sci. Soc.
Am. J., 43, 292–297, 1979.
Johnson, A. H., Frizano, J., and Vann, D. R.: Biogeochemical implications of
labile phosphorus in forest soils determined by the Hedley fractionation
procedure, Oecologia, 135, 487–499, https://doi.org/10.1007/s00442-002-1164-5, 2003.
Keiluweit, M., Nico, P. S., Kleber, M., and Fendorf, S.: Are oxygen
limitations under recognized regulators of organic carbon turnover in upland
soils?, Biogeochemistry, 127, 157–171, https://doi.org/10.1007/s10533-015-0180-6, 2016.
Lin, Y., Bhattacharyya, A., Campbell, A. N., Nico, P. S., Pett-Ridge, J.,
and Silver, W. L.: Phosphorus fractionation responds to dynamic redox
conditions in a humid tropical forest soil, J. Geophys. Res.-Biogeo., 123, 3016–3027, https://doi.org/10.1029/2018JG004420, 2018.
Lin, Y., Gross, A., O'Connell, C. S., and Silver, W. L.: Anoxic conditions maintained high phosphorus sorption in humid tropical forest soils, HydroShare, available at: http://www.hydroshare.org/resource/36b97e432cd44f42867fd019dbe4cf19, last access: 18 November 2019.
Lindsay, W. L.: Iron, in: Chemical equilibria in soils, edited by: Lindsay,
W. L., John Wiley and Sons Ltd., Chichester, UK, 129–149, 1979.
Liptzin, D. and Silver, W. L.: Effects of carbon additions on iron
reduction and phosphorus availability in a humid tropical forest soil, Soil
Biol. Biochem., 41, 1696–1702, https://doi.org/10.1016/j.soilbio.2009.05.013,
2009.
Mage, S. M. and Porder, S.: Parent material and topography determine soil
phosphorus status in the Luquillo Mountains of Puerto Rico, Ecosystems, 16,
284–294, https://doi.org/10.1007/s10021-012-9612-5, 2012.
Maranguit, D., Guillaume, T., and Kuzyakov, Y.: Effects of flooding on
phosphorus and iron mobilization in highly weathered soils under different
land-use types: Short-term effects and mechanisms, Catena, 158, 161–170,
https://doi.org/10.1016/j.catena.2017.06.023, 2017.
McDowell, W. H.: Internal nutrient fluxes in a Puerto Rican rain forest,
J. Trop. Ecol., 14, 521–536, https://doi.org/10.1017/S0266467498000376, 1998.
McDowell, W. H. and Liptzin, D.: Linking soils and streams: Response of
soil solution chemistry to simulated hurricane disturbance mirrors stream
chemistry following a severe hurricane, Forest Ecol. Manage., 332,
56–63, https://doi.org/10.1016/j.foreco.2014.06.001, 2014.
McGechan, M. B. and Lewis, D. R.: Sorption of Phosphorus by Soil, Part 1:
Principles, Equations and Models, Biosyst. Eng., 82, 1–24,
https://doi.org/10.1006/bioe.2001.0013, 2002.
Murphy, J. and Riley, J. P.: A modified single solution method for the
determination of phosphate in natural waters, Anal. Chim. Acta, 27,
31–36, 1962.
Murphy, S. F., Stallard, R. F., Scholl, M. A., González, G., and
Torres-Sánchez, A. J.: Reassessing rainfall in the Luquillo Mountains,
Puerto Rico: Local and global ecohydrological implications, PLoS ONE, 12, e0180987,
https://doi.org/10.1371/journal.pone.0180987, 2017.
O'Connell, C. S., Ruan, L., and Silver, W. L.: Drought drives rapid shifts
in tropical rainforest soil biogeochemistry and greenhouse gas emissions,
Nat. Commun., 9, 1348, https://doi.org/10.1038/s41467-018-03352-3, 2018.
Oh, Y. M., Hesterberg, D. L., and Nelson, P. V.: Comparison of phosphate
adsorption on clay minerals for soilless root media, Commun. Soil
Sci. Plan., 30, 747–756, 1999.
Olander, L. P. and Vitousek, P. M.: Biological and geochemical sinks for
phosphorus in soil from a wet tropical forest, Ecosystems, 7, 404–419,
https://doi.org/10.1007/s10021-004-0264-y, 2004.
Patrick, W. H. and Khalid, R. A.: Phosphate release and sorption by soils
and sediments: effect of aerobic and anaerobic conditions, Science, 186,
53–55, 1974.
Peretyazhko, T. and Sposito, G.: Iron(III) reduction and phosphorous
solubilization in humid tropical forest soils, Geochim. Cosmochim.
Ac., 69, 3643–3652, https://doi.org/10.1016/j.gca.2005.03.045, 2005.
Pett-Ridge, J.: Rapidly fluctuating redox regimes frame the ecology of
microbial communities and their biogeochemical function in a humid tropical
soil, PhD, University of California, Berkeley, 2005.
Pett-Ridge, J. C.: Contributions of dust to phosphorus cycling in tropical
forests of the Luquillo Mountains, Puerto Rico, Biogeochemistry, 94, 63–80,
https://doi.org/10.1007/s10533-009-9308-x, 2009.
Quintero, C. E., Gutiérrez-Boem, F. H., Befani, M. R., and Boschetti, N.
G.: Effects of soil flooding on P transformations in soils of the
Mesopotamia region, Argentina, J. Plant Nutr. Soil Sc.,
170, 500–505, https://doi.org/10.1002/jpln.200625015, 2007.
Rakotoson, T., Amery, F., Rabeharisoa, L., and Smolders, E.: Soil flooding
and rice straw addition can increase isotopic exchangeable phosphorus in
P-deficient tropical soils, Soil Use Manage., 30, 189–197,
https://doi.org/10.1111/sum.12120, 2014.
R Core Team: R: A language and environment for statistical computing. R
Foundation for Statistical Computing, Vienna, Austria, available at:
https://www.R-project.org/, last access: 7 September 2019.
Reed, S. C. and Wood, T. E.: Soil phosphorus cycling in tropical soils: An
ultisol and oxisol perspective, in: Soil phosphorus, Taylor & Francis, Oxfordshire, UK,
247–283, 2016.
Roy, E. D., Willig, E., Richards, P., Martinelli, L. A., Vazquez, F. F.,
Pegorini, L., Spera, S. A., and Porder, S.: Soil phosphorus sorption
capacity after three decades of intensive fertilization in Mato Grosso,
Brazil, Agriculture Ecosystems Environment, 249, 206–214,
https://doi.org/10.1016/j.agee.2017.08.004, 2017.
Ryden, J. C. and Syers, J. K.: Origin of the labile phosphate pool in
soils, Soil Sci., 123, 353–361, 1977.
Sallade, Y. E. and Sims, J. T.: Phosphorus transformations in the sediments
of Delaware's agricultural drainageways: II. Effect of reducing conditions
on phosphorus release, J. Environ. Qual., 26, 1579–1588,
1997.
Scatena, F. N.: An introduction to the physiography and history of the
Bisley Experimental Watersheds in the Luquillo Mountains of Puerto Rico, US
Department of Agriculture, Forest Service, Southern Forest Experiment
Station, New Orleans, LA, 1989.
Scatena, F. N. and Lugo, A. E.: Geomorphology, disturbance, and the soil
and vegetation of two subtropical wet steepland watersheds of Puerto Rico,
Geomorphology, 13, 199–213, 1995.
Schuur, E. A. G., Chadwick, O. A., and Matson, P. A.: Carbon cycling and
soil carbon storage in mesic to wet Hawaiian montane forests, Ecology, 82,
3182–3196, 2001.
Shenker, M., Seitelbach, S., Brand, S., Haim, A., and Litaor, M. I.: Redox
reactions and phosphorus release in re-flooded soils of an altered wetland,
European J. Soil Sci., 56, 515–525, 2005.
Silver, W. L., Scatena, F. N., Johnson, A. H., Siccama, T. G., and Sanchez,
M. J.: Nutrient availability in a montane wet tropical forest: spatial
patterns and methodological considerations, Plant Soil, 164, 129–145,
1994.
Silver, W. L., Lugo, A. E., and Keller, M.: Soil oxygen availability and
biogeochemistry along rainfall and topographic gradients in upland wet
tropical forest soils, Biogeochemistry, 44, 301–328,
https://doi.org/10.1023/A:1006034126698, 1999.
Thompson, A. and Goyne, K. W.: Introduction to the sorption of chemical
constituents in soils, Nature Education Knowledge, 4, 7, 2012.
Tiessen, H. and Moir, J. O.: Characterization of Available P by Sequential Extraction, in: Soil Sampling and Methods of Analysis, edited by: Carter, M. R., Lewis Publishers, Boca Raton, pp. 75–86, 1993.
Viollier, E., Inglett, P. W., Hunter, K., Roychoudhury, A. N., and Van Cappellen, P.: The ferrozine method revisited: Fe (II)/Fe (III) determination in natural waters, Appl. Geochem., 15, 785–790, 2000.
Vitousek, P. M. and Sanford Jr., R. L.: Nutrient cycling in moist tropical
forest, Annu. Rev. Ecol. Syst., 17, 137–167, 1986.
Walpersdorf, E., Koch, C. B., Heiberg, L., O'Connell, D. W., Kjaergaard, C.,
and Hansen, H. C. B.: Does vivianite control phosphate solubility in anoxic
meadow soils?, Geoderma, 193–194, 189–199, https://doi.org/10.1016/j.geoderma.2012.10.003,
2013.
Weaver, P. L. and Murphy, P. G.: Forest structure and productivity in
Puerto Rico's Luquillo Mountains, Biotropica, 22, 69–82, 1990.
Wieder, W. R., Cleveland, C. C., and Townsend, A. R.: Throughfall exclusion
and leaf litter addition drive higher rates of soil nitrous oxide emissions
from a lowland wet tropical forest, Global Change Biol., 17, 3195–3207,
2011.
Willett, I. R.: Causes and prediction of changes in extractable phosphorus
during flooding, Soil Res., 27, 45–54, 1989.
Wilmoth, J. L., Moran, M. A., and Thompson, A.: Transient O2 pulses
direct Fe crystallinity and Fe(III)-reducer gene expression within a soil
microbiome, Microbiome, 6, 189, https://doi.org/10.1186/s40168-018-0574-5, 2018.
Wisawapipat, W., Kheoruenromne, I., Suddhiprakarn, A., and Gilkes, R. J.:
Phosphate sorption and desorption by Thai upland soils, Geoderma, 153,
408–415, https://doi.org/10.1016/j.geoderma.2009.09.005, 2009.
Zhang, Y. S., Lin, X. Y., and Werner, W.: The effect of soil flooding on the
transformation of Fe oxides and the adsorption/desorption behavior of
phosphate, J. Plant Nutr. Soil Sc., 166, 68–75,
https://doi.org/10.1002/jpln.200390014, 2003.
Short summary
Phosphorus (P) is an important soil nutrient that often limits plant growth and microbial activity in humid tropical forests. These ecosystems receive a large amount of rainfall that helps create frequent anoxic events in soils. Our results show that anoxic conditions reduced the strength of soil minerals to bind P even though a large amount of P was still bound to minerals. Our study suggests that anoxic events might serve as hot moments for plants and microbes to acquire P.
Phosphorus (P) is an important soil nutrient that often limits plant growth and microbial...
Altmetrics
Final-revised paper
Preprint