Articles | Volume 18, issue 18
Biogeosciences, 18, 5097–5115, 2021
https://doi.org/10.5194/bg-18-5097-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Biogeosciences, 18, 5097–5115, 2021
https://doi.org/10.5194/bg-18-5097-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
16 Sep 2021
Research article
| 16 Sep 2021
Choosing an optimal β factor for relaxed eddy accumulation applications across vegetated and non-vegetated surfaces
Teresa Vogl et al.
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Willi Schimmel, Heike Kalesse-Los, Maximilian Maahn, Teresa Vogl, Andreas Foth, Pablo Saavedra Garfias, and Patric Seifert
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2022-149, https://doi.org/10.5194/amt-2022-149, 2022
Revised manuscript accepted for AMT
Short summary
Short summary
This study demonstrates that the VOODOO method could be a powerful addition to the existing Cloudnet target classification, making the detection of liquid layers beyond complete lidar attenuation possible. In conclusion, VOODOO performs best for (multi-layer) stratiform, deep mixed-phase cloud situations with liquid water path >100g m-2.
Teresa Vogl, Maximilian Maahn, Stefan Kneifel, Willi Schimmel, Dmitri Moisseev, and Heike Kalesse-Los
Atmos. Meas. Tech., 15, 365–381, https://doi.org/10.5194/amt-15-365-2022, https://doi.org/10.5194/amt-15-365-2022, 2022
Short summary
Short summary
We are using machine learning techniques, a type of artificial intelligence, to detect graupel formation in clouds. The measurements used as input to the machine learning framework were performed by cloud radars. Cloud radars are instruments located at the ground, emitting radiation with wavelenghts of a few millimeters vertically into the cloud and measuring the back-scattered signal. Our novel technique can be applied to different radar systems and different weather conditions.
Silke Trömel, Clemens Simmer, Ulrich Blahak, Armin Blanke, Sabine Doktorowski, Florian Ewald, Michael Frech, Mathias Gergely, Martin Hagen, Tijana Janjic, Heike Kalesse-Los, Stefan Kneifel, Christoph Knote, Jana Mendrok, Manuel Moser, Gregor Köcher, Kai Mühlbauer, Alexander Myagkov, Velibor Pejcic, Patric Seifert, Prabhakar Shrestha, Audrey Teisseire, Leonie von Terzi, Eleni Tetoni, Teresa Vogl, Christiane Voigt, Yuefei Zeng, Tobias Zinner, and Johannes Quaas
Atmos. Chem. Phys., 21, 17291–17314, https://doi.org/10.5194/acp-21-17291-2021, https://doi.org/10.5194/acp-21-17291-2021, 2021
Short summary
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The article introduces the ACP readership to ongoing research in Germany on cloud- and precipitation-related process information inherent in polarimetric radar measurements, outlines pathways to inform atmospheric models with radar-based information, and points to remaining challenges towards an improved fusion of radar polarimetry and atmospheric modelling.
Markus Hartmann, Xianda Gong, Simonas Kecorius, Manuela van Pinxteren, Teresa Vogl, André Welti, Heike Wex, Sebastian Zeppenfeld, Hartmut Herrmann, Alfred Wiedensohler, and Frank Stratmann
Atmos. Chem. Phys., 21, 11613–11636, https://doi.org/10.5194/acp-21-11613-2021, https://doi.org/10.5194/acp-21-11613-2021, 2021
Short summary
Short summary
Ice-nucleating particles (INPs) are not well characterized in the Arctic despite their importance for the Arctic energy budget. Little is known about their nature (mineral or biological) and sources (terrestrial or marine, long-range transport or local). We find indications that, at the beginning of the melt season, a local, biogenic, probably marine source is likely, but significant enrichment of INPs has to take place from the ocean to the aerosol phase.
Simonas Kecorius, Teresa Vogl, Pauli Paasonen, Janne Lampilahti, Daniel Rothenberg, Heike Wex, Sebastian Zeppenfeld, Manuela van Pinxteren, Markus Hartmann, Silvia Henning, Xianda Gong, Andre Welti, Markku Kulmala, Frank Stratmann, Hartmut Herrmann, and Alfred Wiedensohler
Atmos. Chem. Phys., 19, 14339–14364, https://doi.org/10.5194/acp-19-14339-2019, https://doi.org/10.5194/acp-19-14339-2019, 2019
Short summary
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Arctic sea-ice retreat, atmospheric new particle formation (NPF), and aerosol–cloud interaction may all be linked via a positive feedback mechanism. Understanding the sources of cloud condensation nuclei (CCN) is an important piece in the Arctic amplification puzzle. We show that Arctic newly formed particles do not have to grow beyond the Aitken mode to act as CCN. This is important, because NPF occurrence in the Arctic is expected to increase, making it a significant contributor to CCN budget.
Heike Kalesse, Teresa Vogl, Cosmin Paduraru, and Edward Luke
Atmos. Meas. Tech., 12, 4591–4617, https://doi.org/10.5194/amt-12-4591-2019, https://doi.org/10.5194/amt-12-4591-2019, 2019
Short summary
Short summary
In a cloud, different particles like liquid water droplets and ice particles can exist simultaneously. To study the evolution of cloud particles from cloud top to bottom one has to find out how many different types of particles with different fall velocities are present. This can be done by analyzing the number of peaks in upward-looking cloud radar Doppler spectra. A new machine-learning algorithm (named PEAKO) that determines the number of peaks is introduced and compared to existing methods.
Willi Schimmel, Heike Kalesse-Los, Maximilian Maahn, Teresa Vogl, Andreas Foth, Pablo Saavedra Garfias, and Patric Seifert
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2022-149, https://doi.org/10.5194/amt-2022-149, 2022
Revised manuscript accepted for AMT
Short summary
Short summary
This study demonstrates that the VOODOO method could be a powerful addition to the existing Cloudnet target classification, making the detection of liquid layers beyond complete lidar attenuation possible. In conclusion, VOODOO performs best for (multi-layer) stratiform, deep mixed-phase cloud situations with liquid water path >100g m-2.
Wolfgang Fischer, Christoph K. Thomas, Nikita Zimov, and Mathias Göckede
Biogeosciences, 19, 1611–1633, https://doi.org/10.5194/bg-19-1611-2022, https://doi.org/10.5194/bg-19-1611-2022, 2022
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Arctic permafrost ecosystems may release large amounts of carbon under warmer future climates and may therefore accelerate global climate change. Our study investigated how long-term grazing by large animals influenced ecosystem characteristics and carbon budgets at a Siberian permafrost site. Our results demonstrate that such management can contribute to stabilizing ecosystems to keep carbon in the ground, particularly through drying soils and reducing methane emissions.
Karl Lapo, Anita Freundorfer, Antonia Fritz, Johann Schneider, Johannes Olesch, Wolfgang Babel, and Christoph K. Thomas
Earth Syst. Sci. Data, 14, 885–906, https://doi.org/10.5194/essd-14-885-2022, https://doi.org/10.5194/essd-14-885-2022, 2022
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The layer of air near the surface is poorly understood during conditions with weak winds. Further, it is even difficult to observe. In this experiment we used distributed temperature sensing to observe air temperature and wind speed at thousands of points simultaneously every couple of seconds. This incredibly rich data set can be used to examine and understand what drives the mixing between the atmosphere and surface during these weak-wind periods.
Teresa Vogl, Maximilian Maahn, Stefan Kneifel, Willi Schimmel, Dmitri Moisseev, and Heike Kalesse-Los
Atmos. Meas. Tech., 15, 365–381, https://doi.org/10.5194/amt-15-365-2022, https://doi.org/10.5194/amt-15-365-2022, 2022
Short summary
Short summary
We are using machine learning techniques, a type of artificial intelligence, to detect graupel formation in clouds. The measurements used as input to the machine learning framework were performed by cloud radars. Cloud radars are instruments located at the ground, emitting radiation with wavelenghts of a few millimeters vertically into the cloud and measuring the back-scattered signal. Our novel technique can be applied to different radar systems and different weather conditions.
Silke Trömel, Clemens Simmer, Ulrich Blahak, Armin Blanke, Sabine Doktorowski, Florian Ewald, Michael Frech, Mathias Gergely, Martin Hagen, Tijana Janjic, Heike Kalesse-Los, Stefan Kneifel, Christoph Knote, Jana Mendrok, Manuel Moser, Gregor Köcher, Kai Mühlbauer, Alexander Myagkov, Velibor Pejcic, Patric Seifert, Prabhakar Shrestha, Audrey Teisseire, Leonie von Terzi, Eleni Tetoni, Teresa Vogl, Christiane Voigt, Yuefei Zeng, Tobias Zinner, and Johannes Quaas
Atmos. Chem. Phys., 21, 17291–17314, https://doi.org/10.5194/acp-21-17291-2021, https://doi.org/10.5194/acp-21-17291-2021, 2021
Short summary
Short summary
The article introduces the ACP readership to ongoing research in Germany on cloud- and precipitation-related process information inherent in polarimetric radar measurements, outlines pathways to inform atmospheric models with radar-based information, and points to remaining challenges towards an improved fusion of radar polarimetry and atmospheric modelling.
Markus Hartmann, Xianda Gong, Simonas Kecorius, Manuela van Pinxteren, Teresa Vogl, André Welti, Heike Wex, Sebastian Zeppenfeld, Hartmut Herrmann, Alfred Wiedensohler, and Frank Stratmann
Atmos. Chem. Phys., 21, 11613–11636, https://doi.org/10.5194/acp-21-11613-2021, https://doi.org/10.5194/acp-21-11613-2021, 2021
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Short summary
Ice-nucleating particles (INPs) are not well characterized in the Arctic despite their importance for the Arctic energy budget. Little is known about their nature (mineral or biological) and sources (terrestrial or marine, long-range transport or local). We find indications that, at the beginning of the melt season, a local, biogenic, probably marine source is likely, but significant enrichment of INPs has to take place from the ocean to the aerosol phase.
Marie-Louise Zeller, Jannis-Michael Huss, Lena Pfister, Karl E. Lapo, Daniela Littmann, Johann Schneider, Alexander Schulz, and Christoph K. Thomas
Earth Syst. Sci. Data, 13, 3439–3452, https://doi.org/10.5194/essd-13-3439-2021, https://doi.org/10.5194/essd-13-3439-2021, 2021
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The boundary layer (BL) is well understood when convectively mixed, yet we lack this understanding when it becomes stable and no longer follows classic similarity theories. The NYTEFOX campaign collected a unique meteorological data set in the Arctic BL of Svalbard during polar night, where it tends to be highly stable. Using innovative fiber-optic distributed sensing, we are able to provide unique insight into atmospheric motions across large distances resolved continuously in space and time.
Amy Hrdina, Jennifer G. Murphy, Anna Gannet Hallar, John C. Lin, Alexander Moravek, Ryan Bares, Ross C. Petersen, Alessandro Franchin, Ann M. Middlebrook, Lexie Goldberger, Ben H. Lee, Munkh Baasandorj, and Steven S. Brown
Atmos. Chem. Phys., 21, 8111–8126, https://doi.org/10.5194/acp-21-8111-2021, https://doi.org/10.5194/acp-21-8111-2021, 2021
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Wintertime air pollution in the Salt Lake Valley is primarily composed of ammonium nitrate, which is formed when gas-phase ammonia and nitric acid react. The major point in this work is that the chemical composition of snow tells a very different story to what we measured in the atmosphere. With the dust–sea salt cations observed in PM2.5 and particle sizing data, we can estimate how much nitric acid may be lost to dust–sea salt that is not accounted for and how much more PM2.5 this could form.
Olli Peltola, Karl Lapo, Ilkka Martinkauppi, Ewan O'Connor, Christoph K. Thomas, and Timo Vesala
Atmos. Meas. Tech., 14, 2409–2427, https://doi.org/10.5194/amt-14-2409-2021, https://doi.org/10.5194/amt-14-2409-2021, 2021
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We evaluated the suitability of fiber-optic distributed temperature sensing (DTS) for observing spatial (>25 cm) and temporal (>1 s) details of airflow within and above forests. The DTS measurements could discern up to third-order moments of the flow and observe spatial details of coherent flow motions. Similar measurements are not possible with more conventional measurement techniques. Hence, the DTS measurements will provide key insights into flows close to roughness elements, e.g. trees.
Karl Lapo, Anita Freundorfer, Lena Pfister, Johann Schneider, John Selker, and Christoph Thomas
Atmos. Meas. Tech., 13, 1563–1573, https://doi.org/10.5194/amt-13-1563-2020, https://doi.org/10.5194/amt-13-1563-2020, 2020
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Most observations of the atmosphere are
point observations, which only measure a small area around the sensor. This limitation creates problems for a number of disciplines, especially those that focus on how the surface and atmosphere exchange heat, mass, and momentum. We used distributed temperature sensing with fiber optics to demonstrate a key breakthrough in observing wind direction in a distributed way, i.e., not at a point, using small structures attached to the fiber-optic cables.
Alexander Moravek, Jennifer G. Murphy, Amy Hrdina, John C. Lin, Christopher Pennell, Alessandro Franchin, Ann M. Middlebrook, Dorothy L. Fibiger, Caroline C. Womack, Erin E. McDuffie, Randal Martin, Kori Moore, Munkhbayar Baasandorj, and Steven S. Brown
Atmos. Chem. Phys., 19, 15691–15709, https://doi.org/10.5194/acp-19-15691-2019, https://doi.org/10.5194/acp-19-15691-2019, 2019
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Ammonium nitrate is a major component of fine particulate matter of wintertime air pollution in the Great Salt Lake Region (UT, USA). We investigate the sources of ammonia in the region by using aircraft observations and comparing them to modelled ammonia mixing ratios based on emission inventory estimates. The results suggest that ammonia emissions are underestimated, specifically in regions with high agricultural activity, while ammonia in Salt Lake City is mainly of local origin.
Simonas Kecorius, Teresa Vogl, Pauli Paasonen, Janne Lampilahti, Daniel Rothenberg, Heike Wex, Sebastian Zeppenfeld, Manuela van Pinxteren, Markus Hartmann, Silvia Henning, Xianda Gong, Andre Welti, Markku Kulmala, Frank Stratmann, Hartmut Herrmann, and Alfred Wiedensohler
Atmos. Chem. Phys., 19, 14339–14364, https://doi.org/10.5194/acp-19-14339-2019, https://doi.org/10.5194/acp-19-14339-2019, 2019
Short summary
Short summary
Arctic sea-ice retreat, atmospheric new particle formation (NPF), and aerosol–cloud interaction may all be linked via a positive feedback mechanism. Understanding the sources of cloud condensation nuclei (CCN) is an important piece in the Arctic amplification puzzle. We show that Arctic newly formed particles do not have to grow beyond the Aitken mode to act as CCN. This is important, because NPF occurrence in the Arctic is expected to increase, making it a significant contributor to CCN budget.
Armin Sigmund, Korbinian Freier, Till Rehm, Ludwig Ries, Christian Schunk, Anette Menzel, and Christoph K. Thomas
Atmos. Chem. Phys., 19, 12477–12494, https://doi.org/10.5194/acp-19-12477-2019, https://doi.org/10.5194/acp-19-12477-2019, 2019
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Air masses at the Schneefernerhaus mountain site at Zugspitze Mountain, Germany, were classified with respect to the atmospheric layer from which they originated and their degree of pollution. Measurements of several gases, particulate matter, and standard meteorological quantities indicated that polluted air was lifted to the site in 31 % of cases and clean air descended to the site in approximately 14 % cases while most of the remaining cases were ambiguous.
Heike Kalesse, Teresa Vogl, Cosmin Paduraru, and Edward Luke
Atmos. Meas. Tech., 12, 4591–4617, https://doi.org/10.5194/amt-12-4591-2019, https://doi.org/10.5194/amt-12-4591-2019, 2019
Short summary
Short summary
In a cloud, different particles like liquid water droplets and ice particles can exist simultaneously. To study the evolution of cloud particles from cloud top to bottom one has to find out how many different types of particles with different fall velocities are present. This can be done by analyzing the number of peaks in upward-looking cloud radar Doppler spectra. A new machine-learning algorithm (named PEAKO) that determines the number of peaks is introduced and compared to existing methods.
Tobias Linhardt, Joseph S. Levy, and Christoph K. Thomas
The Cryosphere, 13, 2203–2219, https://doi.org/10.5194/tc-13-2203-2019, https://doi.org/10.5194/tc-13-2203-2019, 2019
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This study presents surface energy fluxes in an Antarctic polar desert in the summer season, comparing wetted soil at a water track with dominating dry soils. Elevated energy uptake, evaporation, and soil heat fluxes at the water track highlight the importance of wetted soils for water and energy cycling in polar deserts. This connection will grow more relevant, as wetted soils are expected to expand due to climate warming, with implications for landscape-scale hydrology and soil ecosystems.
Anne Klosterhalfen, Alexander Graf, Nicolas Brüggemann, Clemens Drüe, Odilia Esser, María P. González-Dugo, Günther Heinemann, Cor M. J. Jacobs, Matthias Mauder, Arnold F. Moene, Patrizia Ney, Thomas Pütz, Corinna Rebmann, Mario Ramos Rodríguez, Todd M. Scanlon, Marius Schmidt, Rainer Steinbrecher, Christoph K. Thomas, Veronika Valler, Matthias J. Zeeman, and Harry Vereecken
Biogeosciences, 16, 1111–1132, https://doi.org/10.5194/bg-16-1111-2019, https://doi.org/10.5194/bg-16-1111-2019, 2019
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To obtain magnitudes of flux components of H2O and CO2 (e.g., transpiration, soil respiration), we applied source partitioning approaches after Scanlon and Kustas (2010) and after Thomas et al. (2008) to high-frequency eddy covariance measurements of 12 study sites covering various ecosystems (croplands, grasslands, and forests) in different climatic regions. We analyzed the interrelations among turbulence, site characteristics, and the performance of both partitioning methods.
Thomas Foken, Wolfgang Babel, and Christoph Thomas
Atmos. Meas. Tech., 12, 971–976, https://doi.org/10.5194/amt-12-971-2019, https://doi.org/10.5194/amt-12-971-2019, 2019
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Recently reported trends of carbon dioxide uptake pose the question of whether trends may be the result of the limited digitalization of gas analysers and sonic anemometers used in the 1990s. Modifying a 12 bit digitalization and the instrument error reported for the R2 and R3 sonic anemometers found elsewhere, the influence of these deficits in comparison to the now commonly used 16 bit digitalization were quantified. Both issues have an effect only on trace gas fluxes of small magnitude.
Armin Sigmund, Lena Pfister, Chadi Sayde, and Christoph K. Thomas
Atmos. Meas. Tech., 10, 2149–2162, https://doi.org/10.5194/amt-10-2149-2017, https://doi.org/10.5194/amt-10-2149-2017, 2017
Related subject area
Biogeochemistry: Air - Land Exchange
Update of a biogeochemical model with process-based algorithms to predict ammonia volatilization from fertilized cultivated uplands and rice paddy fields
Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment
Climatic variation drives loss and restructuring of carbon and nitrogen in boreal forest wildfire
Gaps in network infrastructure limit our understanding of biogenic methane emissions for the United States
Contrasting drought legacy effects on gross primary productivity in a mixed versus pure beech forest
Changes of the aerodynamic characteristics of a flux site after an extensive windthrow
Carbon sequestration potential of street tree plantings in Helsinki
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Sensitivity of biomass burning emissions estimates to land surface information
A convolutional neural network for spatial downscaling of satellite-based solar-induced chlorophyll fluorescence (SIFnet)
Influence of plant ecophysiology on ozone dry deposition: comparing between multiplicative and photosynthesis-based dry deposition schemes and their responses to rising CO2 level
Variability and Uncertainty in Flux-Site Scale Net Ecosystem Exchange Simulations Based on Machine Learning and Remote Sensing: A Systematic Evaluation
Modeling the interinfluence of fertilizer-induced NH3 emission, nitrogen deposition, and aerosol radiative effects using modified CESM2
Physiological and climate controls on foliar mercury uptake by European tree species
Radiation, soil water content, and temperature effects on carbon cycling in an alpine swamp meadow of the northeastern Qinghai–Tibetan Plateau
Representativeness assessment of the pan-Arctic eddy covariance site network and optimized future enhancements
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part I: Measuring temporal dynamics
Ideas and perspectives: Emerging contours of a dynamic exogenous kerogen cycle
Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection
On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes
Mercury accumulation in leaves of different plant types – the significance of tissue age and specific leaf area
Moist moss tundra on Kapp Linne, Svalbard is a net source of CO2 and CH4 to the atmosphere
Isolation of subpollen particles (SPPs) of birch: SPPs are potential carriers of ice nucleating macromolecules
Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea
Ice nucleation by viruses and their potential for cloud glaciation
Carbon dioxide fluxes and carbon balance of an agricultural grassland in southern Finland
Sun-induced fluorescence and near-infrared reflectance of vegetation track the seasonal dynamics of gross primary production over Africa
Measurement and modelling of the dynamics of NH3 surface–atmosphere exchange over the Amazonian rainforest
Isoprene and monoterpene emissions from alder, aspen and spruce short-rotation forest plantations in the United Kingdom
Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia)
Methane efflux from an American bison herd
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A climate-dependent global model of ammonia emissions from chicken farming
Calculating canopy stomatal conductance from eddy covariance measurements, in light of the energy budget closure problem
Decoupling of a Douglas fir canopy: a look into the subcanopy with continuous vertical temperature profiles
Variations in diurnal and seasonal net ecosystem carbon dioxide exchange in a semiarid sandy grassland ecosystem in China's Horqin Sandy Land
Biogenic volatile organic compound ambient mixing ratios and emission rates in the Alaskan Arctic tundra
Quantifying the spatial extent and intensity of recent extreme drought events in the Amazon rainforest and their impacts on the carbon cycle
Surfaces of silver birch (Betula pendula) are sources of biological ice nuclei: in vivo and in situ investigations
Ideas and perspectives: enhancing the impact of the FLUXNET network of eddy covariance sites
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Distinguishing between early- and late-covering crops in the land surface model Noah-MP: impact on simulated surface energy fluxes and temperature
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Scaling carbon fluxes from eddy covariance sites to globe: synthesis and evaluation of the FLUXCOM approach
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Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
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The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
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Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
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This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
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To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-99, https://doi.org/10.5194/bg-2022-99, 2022
Preprint under review for BG
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Drought legacies on ecosystem carbon fluxes are challenging to detect in observation. We developed an approach to quantify drought legacies on gross primary productivity (GPP) using eddy-covariance (EC) data. To the best of our knowledge, this is the first time drought legacies on ecosystem carbon fluxes in observation are found using EC data. The GPP reduction due to drought legacy effects is of comparable magnitude to the concurrent effects, which confirms the importance of legacy effects.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
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This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
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The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
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Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Makoto Saito, Tomohiro Shiraishi, Ryuichi Hirata, Yosuke Niwa, Kazuyuki Saito, Martin Steinbacher, Doug Worthy, and Tsuneo Matsunaga
Biogeosciences, 19, 2059–2078, https://doi.org/10.5194/bg-19-2059-2022, https://doi.org/10.5194/bg-19-2059-2022, 2022
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This study tested combinations of two sources of AGB data and two sources of LCC data and used the same burned area satellite data to estimate BB CO emissions. Our analysis showed large discrepancies in annual mean CO emissions and explicit differences in the simulated CO concentrations among the BB emissions estimates. This study has confirmed that BB emissions estimates are sensitive to the land surface information on which they are based.
Johannes Gensheimer, Alexander J. Turner, Philipp Köhler, Christian Frankenberg, and Jia Chen
Biogeosciences, 19, 1777–1793, https://doi.org/10.5194/bg-19-1777-2022, https://doi.org/10.5194/bg-19-1777-2022, 2022
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We develop a convolutional neural network, named SIFnet, that increases the spatial resolution of SIF from TROPOMI by a factor of 10 to a spatial resolution of 0.005°. SIFnet utilizes coarse SIF observations, together with a broad range of high-resolution auxiliary data. The insights gained from interpretable machine learning techniques allow us to make quantitative claims about the relationships between SIF and other common parameters related to photosynthesis.
Shihan Sun, Amos P. K. Tai, David H. Y. Yung, Anthony Y. H. Wong, Jason A. Ducker, and Christopher D. Holmes
Biogeosciences, 19, 1753–1776, https://doi.org/10.5194/bg-19-1753-2022, https://doi.org/10.5194/bg-19-1753-2022, 2022
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We developed and used a terrestrial biosphere model to compare and evaluate widely used empirical dry deposition schemes with different stomatal approaches and found that using photosynthesis-based stomatal approaches can reduce biases in modeled dry deposition velocities in current chemical transport models. Our study shows systematic errors in current dry deposition schemes and the importance of representing plant ecophysiological processes in models under a changing climate.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-46, https://doi.org/10.5194/bg-2022-46, 2022
Revised manuscript accepted for BG
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A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these NEE simulations. Random forests and support vector machines performed better than other algorithms. Models with larger time scales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Ka Ming Fung, Maria Val Martin, and Amos P. K. Tai
Biogeosciences, 19, 1635–1655, https://doi.org/10.5194/bg-19-1635-2022, https://doi.org/10.5194/bg-19-1635-2022, 2022
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Fertilizer-induced ammonia detrimentally affects the environment by not only directly damaging ecosystems but also indirectly altering climate and soil fertility. To quantify these secondary impacts, we enabled CESM to simulate ammonia emission, chemical evolution, and deposition as a continuous cycle. If synthetic fertilizer use is to soar by 30 % from today's level, we showed that the counteracting impacts will increase the global ammonia emission by 3.3 Tg N per year.
Lena Wohlgemuth, Pasi Rautio, Bernd Ahrends, Alexander Russ, Lars Vesterdal, Peter Waldner, Volkmar Timmermann, Nadine Eickenscheidt, Alfred Fürst, Martin Greve, Peter Roskams, Anne Thimonier, Manuel Nicolas, Anna Kowalska, Morten Ingerslev, Päivi Merilä, Sue Benham, Carmen Iacoban, Günter Hoch, Christine Alewell, and Martin Jiskra
Biogeosciences, 19, 1335–1353, https://doi.org/10.5194/bg-19-1335-2022, https://doi.org/10.5194/bg-19-1335-2022, 2022
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Gaseous mercury is present in the atmosphere all over the globe. During the growing season, plants take up mercury from the air in a similar way as CO2. We investigated which factors impact this vegetational mercury uptake by analyzing a large dataset of leaf mercury uptake rates of trees in Europe. As a result, we conclude that mercury uptake is foremost controlled by tree-intrinsic traits like physiological activity but also by climatic factors like dry conditions in the air and in soils.
Junqi Wei, Xiaoyan Li, Lei Liu, Torben Røjle Christensen, Zhiyun Jiang, Yujun Ma, Xiuchen Wu, Hongyun Yao, and Efrén López-Blanco
Biogeosciences, 19, 861–875, https://doi.org/10.5194/bg-19-861-2022, https://doi.org/10.5194/bg-19-861-2022, 2022
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Although water availability has been linked to the response of ecosystem carbon (C) sink–source to climate warming, the mechanisms by which C uptake responds to soil moisture remain unclear. We explored how soil water and other environmental drivers modulate net C uptake in an alpine swamp meadow. Results reveal that nearly saturated soil conditions during warm seasons can help to maintain lower ecosystem respiration and therefore enhance the C sequestration capacity in this alpine swamp meadow.
Martijn M. T. A. Pallandt, Jitendra Kumar, Marguerite Mauritz, Edward A. G. Schuur, Anna-Maria Virkkala, Gerardo Celis, Forrest M. Hoffman, and Mathias Göckede
Biogeosciences, 19, 559–583, https://doi.org/10.5194/bg-19-559-2022, https://doi.org/10.5194/bg-19-559-2022, 2022
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Thawing of Arctic permafrost soils could trigger the release of vast amounts of carbon to the atmosphere, thus enhancing climate change. Our study investigated how well the current network of eddy covariance sites to monitor greenhouse gas exchange at local scales captures pan-Arctic flux patterns. We identified large coverage gaps, e.g., in Siberia, but also demonstrated that a targeted addition of relatively few sites can significantly improve network performance.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, and Christian Brümmer
Biogeosciences, 19, 389–413, https://doi.org/10.5194/bg-19-389-2022, https://doi.org/10.5194/bg-19-389-2022, 2022
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Fluxes of total reactive nitrogen (∑Nr) over a low polluted forest were analyzed with regard to their temporal dynamics. Mostly deposition was observed with median fluxes ranging from −15 to −5 ng N m−2 s−1, corresponding to a range of deposition velocities from 0.2 to 0.5 cm s−1. While seasonally changing contributions of NH3 and NOx to the ∑Nr signal were found, we estimate an annual total N deposition (dry+wet) of 12.2 and 10.9 kg N ha−1 a−1 in the 2 years of observation.
Thomas M. Blattmann
Biogeosciences, 19, 359–373, https://doi.org/10.5194/bg-19-359-2022, https://doi.org/10.5194/bg-19-359-2022, 2022
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This work enunciates the possibility of kerogen oxidation contributing to atmospheric CO2 increase in the wake of glacial episodes. This hypothesis is substantiated by several lines of independent evidence synthesized in this contribution. The author hypothesizes that the deglaciation of kerogen-rich lithologies in western Canada contributed to the characteristic deglacial increase in atmospheric CO2.
Juliana Gil-Loaiza, Joseph R. Roscioli, Joanne H. Shorter, Till H. M. Volkmann, Wei-Ren Ng, Jordan E. Krechmer, and Laura K. Meredith
Biogeosciences, 19, 165–185, https://doi.org/10.5194/bg-19-165-2022, https://doi.org/10.5194/bg-19-165-2022, 2022
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We evaluated a new diffusive soil probe integrated with high-resolution gas analyzers to measure soil gases in real time at a centimeter scale. Using columns with simple silica and soil, we captured changes in carbon dioxide (CO2), volatile organic compounds (VOCs), and nitrous oxide (N2O) with its isotopes to distinguish potential nutrient sources and microbial metabolism. This approach will advance the use of soil gases as important signals to understand and monitor soil fertility and health.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 29–45, https://doi.org/10.5194/bg-19-29-2022, https://doi.org/10.5194/bg-19-29-2022, 2022
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Modeling vegetation canopy is important in predicting whether the land remains a carbon sink to mitigate climate change in the near future. Vegetation canopy model complexity, however, impacts the model-predicted carbon and water fluxes as well as canopy fluorescence, even if the same suite of model inputs is used. Given the biases caused by canopy model complexity, we recommend not misusing parameters inverted using different models or assumptions.
Håkan Pleijel, Jenny Klingberg, Michelle Nerentorp, Malin C. Broberg, Brigitte Nyirambangutse, John Munthe, and Göran Wallin
Biogeosciences, 18, 6313–6328, https://doi.org/10.5194/bg-18-6313-2021, https://doi.org/10.5194/bg-18-6313-2021, 2021
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Mercury is a problematic metal in the environment. It is crucial to understand the Hg circulation in ecosystems. We explored the mercury concentration in foliage from a diverse set of plants, locations and sampling periods to study the accumulation of Hg in leaves–needles over time. Mercury was always higher in older tissue: in broadleaved trees, conifers and wheat. Specific leaf area, the leaf area per unit leaf mass, turned out to be critical for Hg accumulation in leaves–needles.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats Nilsson
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-308, https://doi.org/10.5194/bg-2021-308, 2021
Revised manuscript accepted for BG
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The moist moss tundra is a small source of CO2 and CH4 on annual basis, Temperature sensitivity during summer is higher for gross primary productivity than for ecosystem respiration at low temperature and the opposite at high temperature. A modest temperature increase of 1 degree increases ecosystem respiration and gross primary productivity of similar magnitude during summer but strengthens the annual source of CO2. Vegetation greeness contribute to explaining bot respiration and CH4 flux.
Julia Burkart, Jürgen Gratzl, Teresa M. Seifried, Paul Bieber, and Hinrich Grothe
Biogeosciences, 18, 5751–5765, https://doi.org/10.5194/bg-18-5751-2021, https://doi.org/10.5194/bg-18-5751-2021, 2021
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Extracts of birch pollen grains are known to be ice nucleation active and thus impact cloud formation and climate. In this study we develop an extraction method to separate subpollen particles from ice nucleating macromolecules. Our results thereby illustrate that ice nucleating macromolecules can be washed off the subpollen particles and that the ice activity is linked to the presence of proteins.
Maria Prass, Meinrat O. Andreae, Alessandro C. de Araùjo, Paulo Artaxo, Florian Ditas, Wolfgang Elbert, Jan-David Förster, Marco Aurélio Franco, Isabella Hrabe de Angelis, Jürgen Kesselmeier, Thomas Klimach, Leslie Ann Kremper, Eckhard Thines, David Walter, Jens Weber, Bettina Weber, Bernhard M. Fuchs, Ulrich Pöschl, and Christopher Pöhlker
Biogeosciences, 18, 4873–4887, https://doi.org/10.5194/bg-18-4873-2021, https://doi.org/10.5194/bg-18-4873-2021, 2021
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Bioaerosols in the atmosphere over the Amazon rain forest were analyzed by molecular biological staining and microscopy. Eukaryotic, bacterial, and archaeal aerosols were quantified in time series and altitude profiles which exhibited clear differences in number concentrations and vertical distributions. Our results provide insights into the sources and dispersion of different Amazonian bioaerosol types as a basis for a better understanding of biosphere–atmosphere interactions.
Michael P. Adams, Nina S. Atanasova, Svetlana Sofieva, Janne Ravantti, Aino Heikkinen, Zoé Brasseur, Jonathan Duplissy, Dennis H. Bamford, and Benjamin J. Murray
Biogeosciences, 18, 4431–4444, https://doi.org/10.5194/bg-18-4431-2021, https://doi.org/10.5194/bg-18-4431-2021, 2021
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The formation of ice in clouds is critically important for the planet's climate. Hence, we need to know which aerosol types nucleate ice and how effectively they do so. Here we show that virus particles, with a range of architectures, nucleate ice when immersed in supercooled water. However, we also show that they only make a minor contribution to the ice-nucleating particle population in the terrestrial atmosphere, but we cannot rule them out as being important in the marine environment.
Laura Heimsch, Annalea Lohila, Juha-Pekka Tuovinen, Henriikka Vekuri, Jussi Heinonsalo, Olli Nevalainen, Mika Korkiakoski, Jari Liski, Tuomas Laurila, and Liisa Kulmala
Biogeosciences, 18, 3467–3483, https://doi.org/10.5194/bg-18-3467-2021, https://doi.org/10.5194/bg-18-3467-2021, 2021
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CO2 and H2O fluxes were measured at a newly established eddy covariance site in southern Finland for 2 years from 2018 to 2020. This agricultural grassland site focuses on the conversion from intensive towards more sustainable agricultural management. The first summer experienced prolonged dry periods, and notably larger fluxes were observed in the second summer. The field acted as a net carbon sink during both study years.
Anteneh Getachew Mengistu, Gizaw Mengistu Tsidu, Gerbrand Koren, Maurits L. Kooreman, K. Folkert Boersma, Torbern Tagesson, Jonas Ardö, Yann Nouvellon, and Wouter Peters
Biogeosciences, 18, 2843–2857, https://doi.org/10.5194/bg-18-2843-2021, https://doi.org/10.5194/bg-18-2843-2021, 2021
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In this study, we assess the usefulness of Sun-Induced Fluorescence of Terrestrial Ecosystems Retrieval (SIFTER) data from the GOME-2A instrument and near-infrared reflectance of vegetation (NIRv) from MODIS to capture the seasonality and magnitudes of gross primary production (GPP) derived from six eddy-covariance flux towers in Africa in the overlap years between 2007–2014. We also test the robustness of sun-induced fluoresence and NIRv to compare the seasonality of GPP for the major biomes.
Robbie Ramsay, Chiara F. Di Marco, Mathew R. Heal, Matthias Sörgel, Paulo Artaxo, Meinrat O. Andreae, and Eiko Nemitz
Biogeosciences, 18, 2809–2825, https://doi.org/10.5194/bg-18-2809-2021, https://doi.org/10.5194/bg-18-2809-2021, 2021
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The exchange of the gas ammonia between the atmosphere and the surface is an important biogeochemical process, but little is known of this exchange for certain ecosystems, such as the Amazon rainforest. This study took measurements of ammonia exchange over an Amazon rainforest site and subsequently modelled the observed deposition and emission patterns. We observed emissions of ammonia from the rainforest, which can be simulated accurately by using a canopy resistance modelling approach.
Gemma Purser, Julia Drewer, Mathew R. Heal, Robert A. S. Sircus, Lara K. Dunn, and James I. L. Morison
Biogeosciences, 18, 2487–2510, https://doi.org/10.5194/bg-18-2487-2021, https://doi.org/10.5194/bg-18-2487-2021, 2021
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Short-rotation forest plantations could help reduce greenhouse gases but can emit biogenic volatile organic compounds. Emissions were measured at a plantation trial in Scotland. Standardised emissions of isoprene from foliage were higher from hybrid aspen than from Sitka spruce and low from Italian alder. Emissions of total monoterpene were lower. The forest floor was only a small source. Model estimates suggest an SRF expansion of 0.7 Mha could increase total UK emissions between < 1 %–35 %.
Daniel Diaz-de-Quijano, Aleksander Vladimirovich Ageev, Elena Anatolevna Ivanova, and Olesia Valerevna Anishchenko
Biogeosciences, 18, 1601–1618, https://doi.org/10.5194/bg-18-1601-2021, https://doi.org/10.5194/bg-18-1601-2021, 2021
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Winter atmospheric nitrogen (N) and phosphorus (P) depositions were measured for the first time in the Western Sayan Mountains (Siberia). The low and very low atmospheric N and P depositions could be responsible for the observed lake phytoplankton N–P colimitation. We hypothesize that slight imbalances in the nutrient deposition, as expected in the context of global change (climate, forest fires and anthropogenic nitrogen emissions), could have important effects on the ecology of these lakes.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
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The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Philipp A. Nauer, Eleonora Chiri, Thanavit Jirapanjawat, Chris Greening, and Perran L. M. Cook
Biogeosciences, 18, 729–737, https://doi.org/10.5194/bg-18-729-2021, https://doi.org/10.5194/bg-18-729-2021, 2021
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Hydrogen (H2) and carbon monoxide (CO) are atmospheric trace gases cycled via microbial metabolisms. We observed strong H2 and CO contamination from rubber septa used to seal common gas sample storage vials. Here we propose a simple and inexpensive modification of such vials to allow reliable storage of H2, CO and methane trace-gas samples for timescales of weeks to months, thus enabling extensive field campaigns to investigate H2 and CO biogeochemistry in remote areas.
Jize Jiang, David S. Stevenson, Aimable Uwizeye, Giuseppe Tempio, and Mark A. Sutton
Biogeosciences, 18, 135–158, https://doi.org/10.5194/bg-18-135-2021, https://doi.org/10.5194/bg-18-135-2021, 2021
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Ammonia is a key water and air pollutant and impacts human health and climate change. Ammonia emissions mainly originate from agriculture. We find that chicken agriculture contributes to large ammonia emissions, especially in hot and wet regions. These emissions can be greatly affected by the local environment, i.e. temperature and humidity, and also by human management. We develop a model that suggests ammonia emissions from chicken farming are likely to increase under a warming climate.
Richard Wehr and Scott R. Saleska
Biogeosciences, 18, 13–24, https://doi.org/10.5194/bg-18-13-2021, https://doi.org/10.5194/bg-18-13-2021, 2021
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Water and carbon exchange between plants and the atmosphere is governed by stomata: adjustable pores in the surfaces of leaves. The combined gas conductance of all the stomata in a canopy has long been estimated using an equation that is shown here to be systematically incorrect because it relies on measurements that are generally inadequate. An alternative approach is shown to be more accurate in all probable scenarios and to imply different responses of stomatal conductance to the environment.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Yayi Niu, Yuqiang Li, Hanbo Yun, Xuyang Wang, Xiangwen Gong, Yulong Duan, and Jing Liu
Biogeosciences, 17, 6309–6326, https://doi.org/10.5194/bg-17-6309-2020, https://doi.org/10.5194/bg-17-6309-2020, 2020
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We report the results from continuous year-round CO2 observations from a sandy grassland in the Horqin Sandy Land using the eddy covariance technique. To quantify the diurnal, seasonal, and annual variation in net ecosystem CO2 exchange, gross primary productivity, and ecosystem respiration and to identify the different scales of environmental factors and the underlying mechanisms, we also explored how the annual precipitation affects the net ecosystem CO2 exchange and its components.
Hélène Angot, Katelyn McErlean, Lu Hu, Dylan B. Millet, Jacques Hueber, Kaixin Cui, Jacob Moss, Catherine Wielgasz, Tyler Milligan, Damien Ketcherside, M. Syndonia Bret-Harte, and Detlev Helmig
Biogeosciences, 17, 6219–6236, https://doi.org/10.5194/bg-17-6219-2020, https://doi.org/10.5194/bg-17-6219-2020, 2020
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We report biogenic volatile organic compounds (BVOCs) ambient levels and emission rates from key vegetation species in the Alaskan arctic tundra, providing a new data set to further constrain isoprene chemistry under low NOx conditions in models. We add to the growing body of evidence that climate-induced changes in the vegetation composition will significantly affect the BVOC emission potential of the tundra, with implications for atmospheric oxidation processes and climate feedbacks.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina Ruscica, Boris Sakschewski, Anna Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-425, https://doi.org/10.5194/bg-2020-425, 2020
Revised manuscript accepted for BG
Teresa M. Seifried, Paul Bieber, Laura Felgitsch, Julian Vlasich, Florian Reyzek, David G. Schmale III, and Hinrich Grothe
Biogeosciences, 17, 5655–5667, https://doi.org/10.5194/bg-17-5655-2020, https://doi.org/10.5194/bg-17-5655-2020, 2020
Dario Papale
Biogeosciences, 17, 5587–5598, https://doi.org/10.5194/bg-17-5587-2020, https://doi.org/10.5194/bg-17-5587-2020, 2020
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FLUXNET is a large, bottom-up, self-coordinated network of sites. It provided ecosystem–atmosphere greenhouse gas fluxes from stations around the world that were used as bases for a large number of publications and studies. Today many applications require recent updates on the data to track more closely the ecosystem responses to climate change and link ground data with satellite programs. For this reason, a new organization of FLUXNET is needed, keeping as its target the FAIR principles.
Christian Markwitz, Alexander Knohl, and Lukas Siebicke
Biogeosciences, 17, 5183–5208, https://doi.org/10.5194/bg-17-5183-2020, https://doi.org/10.5194/bg-17-5183-2020, 2020
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Agroforestry has been shown to alter the microclimate and to lead to higher carbon sequestration above ground and in the soil. In this study, we investigated the impact of agroforestry systems on system-scale evapotranspiration (ET) due to concerns about increased water losses to the atmosphere. Results showed small differences in annual sums of ET over agroforestry relative to monoculture systems, indicating that agroforestry in Germany can be a land use alternative to monoculture agriculture.
Arnaud P. Praplan, Toni Tykkä, Simon Schallhart, Virpi Tarvainen, Jaana Bäck, and Heidi Hellén
Biogeosciences, 17, 4681–4705, https://doi.org/10.5194/bg-17-4681-2020, https://doi.org/10.5194/bg-17-4681-2020, 2020
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In this paper, we study emissions of volatile organic compounds (VOCs) from three boreal tree species. Individual compounds are quantified with on-line separation analytical techniques, while the total reactivity of the emissions is measured using a custom-built instrument. On some occasions, in particular when the trees suffer from stress, the total reactivity measured is higher than the sum of the reactivity of individual compounds. This indicates that the threes emit VOCs that remain unknown.
June Skeeter, Andreas Christen, Andrée-Anne Laforce, Elyn Humphreys, and Greg Henry
Biogeosciences, 17, 4421–4441, https://doi.org/10.5194/bg-17-4421-2020, https://doi.org/10.5194/bg-17-4421-2020, 2020
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This study investigates carbon fluxes at Illisarvik, an artificial drained thermokarst lake basin (DTLB) in Canada's Northwest Territories. This is the first carbon balance study in a DTLB outside of Alaska. We used neural networks to identify the factors controlling fluxes and to model the effects of the controlling factors. We discuss the role of vegetation heterogeneity in fluxes, especially of methane, and we show how the carbon fluxes differ from Alaskan DTLBs.
Anne J. Hoek van Dijke, Kaniska Mallick, Martin Schlerf, Miriam Machwitz, Martin Herold, and Adriaan J. Teuling
Biogeosciences, 17, 4443–4457, https://doi.org/10.5194/bg-17-4443-2020, https://doi.org/10.5194/bg-17-4443-2020, 2020
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We investigated the link between the vegetation leaf area index (LAI) and the land–atmosphere exchange of water, energy, and carbon fluxes. We show that the correlation between the LAI and water and energy fluxes depends on the vegetation type and aridity. For carbon fluxes, however, the correlation with the LAI was strong and independent of vegetation and aridity. This study provides insight into when the vegetation LAI can be used to model or extrapolate land–atmosphere fluxes.
Jordi Vilà-Guerau de Arellano, Patrizia Ney, Oscar Hartogensis, Hugo de Boer, Kevin van Diepen, Dzhaner Emin, Geiske de Groot, Anne Klosterhalfen, Matthias Langensiepen, Maria Matveeva, Gabriela Miranda-García, Arnold F. Moene, Uwe Rascher, Thomas Röckmann, Getachew Adnew, Nicolas Brüggemann, Youri Rothfuss, and Alexander Graf
Biogeosciences, 17, 4375–4404, https://doi.org/10.5194/bg-17-4375-2020, https://doi.org/10.5194/bg-17-4375-2020, 2020
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The CloudRoots field experiment has obtained an open comprehensive observational data set that includes soil, plant, and atmospheric variables to investigate the interactions between a heterogeneous land surface and its overlying atmospheric boundary layer, including the rapid perturbations of clouds in evapotranspiration. Our findings demonstrate that in order to understand and represent diurnal variability, we need to measure and model processes from the leaf to the landscape scales.
Dean Howard, Yannick Agnan, Detlev Helmig, Yu Yang, and Daniel Obrist
Biogeosciences, 17, 4025–4042, https://doi.org/10.5194/bg-17-4025-2020, https://doi.org/10.5194/bg-17-4025-2020, 2020
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The Arctic tundra represents a vast store of carbon that may be broken down by microbial activity into greenhouse gases such as CO2 and CH4. Though microbes are less active in winter, the long duration of the cold season makes this period very important for carbon cycling. We show that, under conditions of warmer winter air temperatures and greater snowfall, deeper soils can remain warm enough to sustain significantly enhanced CH4 emission. This could have large implications for future climates.
Kristina Bohm, Joachim Ingwersen, Josipa Milovac, and Thilo Streck
Biogeosciences, 17, 2791–2805, https://doi.org/10.5194/bg-17-2791-2020, https://doi.org/10.5194/bg-17-2791-2020, 2020
Domenico Vitale, Gerardo Fratini, Massimo Bilancia, Giacomo Nicolini, Simone Sabbatini, and Dario Papale
Biogeosciences, 17, 1367–1391, https://doi.org/10.5194/bg-17-1367-2020, https://doi.org/10.5194/bg-17-1367-2020, 2020
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This work describes a data cleaning procedure for the detection of eddy covariance fluxes affected by systematic errors. We believe that the proposed procedure can serve as a basis toward a unified quality control strategy suitable for the centralized data processing pipelines, where the use of completely data-driven and scalable procedures that guarantee high-quality standards and reproducibility of the released products constitutes an essential prerequisite.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Samantha J. Basile, Xin Lin, William R. Wieder, Melannie D. Hartman, and Gretchen Keppel-Aleks
Biogeosciences, 17, 1293–1308, https://doi.org/10.5194/bg-17-1293-2020, https://doi.org/10.5194/bg-17-1293-2020, 2020
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Soil heterotrophic respiration (HR) is an important component of land–atmosphere carbon exchange but is difficult to observe globally. We analyzed the imprint that this flux leaves on atmospheric CO2 using a set of simulations from HR models with common inputs. Models that represent microbial processes are more variable and have stronger temperature sensitivity than those that do not. Our results show that we can use atmospheric CO2 observations to evaluate and improve models of HR.
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Short summary
The relaxed eddy accumulation technique is a method used for measuring fluxes of chemical species in the atmosphere. It relies on a proportionality factor, β, which can be determined using different methods. Also, different techniques for sampling can be used by only drawing air into the measurement system when vertical wind velocity exceeds a certain threshold. We compare different ways to obtain β and different threshold techniques to direct flux measurements for three different sites.
The relaxed eddy accumulation technique is a method used for measuring fluxes of chemical...
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