Articles | Volume 21, issue 14
https://doi.org/10.5194/bg-21-3251-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Special issue:
https://doi.org/10.5194/bg-21-3251-2024
© Author(s) 2024. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
17 Jul 2024
Research article |
| 17 Jul 2024
| 17 Jul 2024
The influence of plant water stress on vegetation–atmosphere exchanges: implications for ozone modelling
Tamara Emmerichs
CORRESPONDING AUTHOR
Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich GmbH, Jülich, Germany
Center for Advanced Simulation and Analytics (CASA), Forschungszentrum Jülich GmbH, Jülich, Germany
Yen-Sen Lu
Jülich Supercomputing Centre, Forschungszentrum Jülich GmbH, Jülich, Germany
Center for Advanced Simulation and Analytics (CASA), Forschungszentrum Jülich GmbH, Jülich, Germany
Domenico Taraborrelli
Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich GmbH, Jülich, Germany
Center for Advanced Simulation and Analytics (CASA), Forschungszentrum Jülich GmbH, Jülich, Germany
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Atmospheric pollutants from anthropogenic activities and biomass burning are usually regarded as ozone precursors. Monocyclic aromatics are no exception. Calculations with a comprehensive atmospheric model are consistent with this view but only for air masses close to pollution source regions. However, the same model predicts that aromatics, when transported to remote areas, may effectively destroy ozone. This loss of tropospheric ozone rivals the one attributed to bromine.
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Rolf Sander, Andreas Baumgaertner, David Cabrera-Perez, Franziska Frank, Sergey Gromov, Jens-Uwe Grooß, Hartwig Harder, Vincent Huijnen, Patrick Jöckel, Vlassis A. Karydis, Kyle E. Niemeyer, Andrea Pozzer, Hella Riede, Martin G. Schultz, Domenico Taraborrelli, and Sebastian Tauer
Geosci. Model Dev., 12, 1365–1385, https://doi.org/10.5194/gmd-12-1365-2019, https://doi.org/10.5194/gmd-12-1365-2019, 2019
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We present the atmospheric chemistry box model CAABA/MECCA which
now includes a number of new features: skeletal mechanism
reduction, the MOM chemical mechanism for volatile organic
compounds, an option to include reactions from the Master
Chemical Mechanism (MCM) and other chemical mechanisms, updated
isotope tagging, improved and new photolysis modules, and the new
feature of coexisting multiple chemistry mechanisms.
CAABA/MECCA is a community model published under the GPL.
Scarlet Stadtler, Thomas Kühn, Sabine Schröder, Domenico Taraborrelli, Martin G. Schultz, and Harri Kokkola
Geosci. Model Dev., 11, 3235–3260, https://doi.org/10.5194/gmd-11-3235-2018, https://doi.org/10.5194/gmd-11-3235-2018, 2018
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Atmospheric aerosols interact with our climate system and have adverse health effects. Nevertheless, these particles are a source of uncertainty in climate projections and the formation process of secondary aerosols formed by organic gas-phase precursors is particularly not fully understood. In order to gain a deeper understanding of secondary organic aerosol formation, this model system explicitly represents gas-phase and aerosol formation processes. Finally, this allows for process discussion.
Chinmay Mallik, Laura Tomsche, Efstratios Bourtsoukidis, John N. Crowley, Bettina Derstroff, Horst Fischer, Sascha Hafermann, Imke Hüser, Umar Javed, Stephan Keßel, Jos Lelieveld, Monica Martinez, Hannah Meusel, Anna Novelli, Gavin J. Phillips, Andrea Pozzer, Andreas Reiffs, Rolf Sander, Domenico Taraborrelli, Carina Sauvage, Jan Schuladen, Hang Su, Jonathan Williams, and Hartwig Harder
Atmos. Chem. Phys., 18, 10825–10847, https://doi.org/10.5194/acp-18-10825-2018, https://doi.org/10.5194/acp-18-10825-2018, 2018
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OH and HO2 control the transformation of air pollutants and O3 formation. Their implication for air quality over the climatically sensitive Mediterranean region was studied during a field campaign in Cyprus. Production of OH, HO2, and recycled OH was lower in aged marine air masses. Box model simulations of OH and HO2 agreed with measurements except at high terpene concentrations when model RO2 due to terpenes caused large HO2 loss. Autoxidation schemes for RO2 improved the agreement.
Martin G. Schultz, Scarlet Stadtler, Sabine Schröder, Domenico Taraborrelli, Bruno Franco, Jonathan Krefting, Alexandra Henrot, Sylvaine Ferrachat, Ulrike Lohmann, David Neubauer, Colombe Siegenthaler-Le Drian, Sebastian Wahl, Harri Kokkola, Thomas Kühn, Sebastian Rast, Hauke Schmidt, Philip Stier, Doug Kinnison, Geoffrey S. Tyndall, John J. Orlando, and Catherine Wespes
Geosci. Model Dev., 11, 1695–1723, https://doi.org/10.5194/gmd-11-1695-2018, https://doi.org/10.5194/gmd-11-1695-2018, 2018
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The chemistry–climate model ECHAM-HAMMOZ contains a detailed representation of tropospheric and stratospheric reactive chemistry and state-of-the-art parameterizations of aerosols. It thus allows for detailed investigations of chemical processes in the climate system. Evaluation of the model with various observational data yields good results, but the model has a tendency to produce too much OH in the tropics. This highlights the important interplay between atmospheric chemistry and dynamics.
Scarlet Stadtler, David Simpson, Sabine Schröder, Domenico Taraborrelli, Andreas Bott, and Martin Schultz
Atmos. Chem. Phys., 18, 3147–3171, https://doi.org/10.5194/acp-18-3147-2018, https://doi.org/10.5194/acp-18-3147-2018, 2018
David Cabrera-Perez, Domenico Taraborrelli, Jos Lelieveld, Thorsten Hoffmann, and Andrea Pozzer
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2017-928, https://doi.org/10.5194/acp-2017-928, 2017
Revised manuscript not accepted
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Aromatic compounds are present in rural and urban atmospheres. The aim of this work is to disentangle the impacts of these compounds in different important atmospheric chemical species with the help of a numerical model. Aromatics have low impact OH, NOx and Ozone concentrations in the global scale (below 4 %). The impact however is larger in the regional scale (up to 10 %). The largest impact is in glyoxal and NO3 concentrations, with changes up to 10 % globally and 40 % regionally.
Stephan Keßel, David Cabrera-Perez, Abraham Horowitz, Patrick R. Veres, Rolf Sander, Domenico Taraborrelli, Maria Tucceri, John N. Crowley, Andrea Pozzer, Christof Stönner, Luc Vereecken, Jos Lelieveld, and Jonathan Williams
Atmos. Chem. Phys., 17, 8789–8804, https://doi.org/10.5194/acp-17-8789-2017, https://doi.org/10.5194/acp-17-8789-2017, 2017
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In this study we identify an often overlooked stable oxide of carbon, namely carbon suboxide (C3O2), in ambient air. We have made C3O2 and in the laboratory determined its absorption cross section data and the rate of reaction with two important atmospheric oxidants, OH and O3. By incorporating known sources and sinks in a global model we have generated a first global picture of the distribution of this species in the atmosphere.
Alexandra-Jane Henrot, Tanja Stanelle, Sabine Schröder, Colombe Siegenthaler, Domenico Taraborrelli, and Martin G. Schultz
Geosci. Model Dev., 10, 903–926, https://doi.org/10.5194/gmd-10-903-2017, https://doi.org/10.5194/gmd-10-903-2017, 2017
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This paper describes the basic results of the biogenic emission scheme, based on MEGAN, integrated into the ECHAM6-HAMMOZ chemistry climate model. Sensitivity to vegetation and climate-dependent parameters is also analysed. This version of the model is now suitable for many tropospheric investigations concerning the impact of biogenic volatile organic compound emissions on the ozone budget, secondary aerosol formation, and atmospheric chemistry.
David Cabrera-Perez, Domenico Taraborrelli, Rolf Sander, and Andrea Pozzer
Atmos. Chem. Phys., 16, 6931–6947, https://doi.org/10.5194/acp-16-6931-2016, https://doi.org/10.5194/acp-16-6931-2016, 2016
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The global atmospheric budget and distribution of monocyclic aromatic compounds is estimated, using an atmospheric chemistry general circulation model. Simulation results are evaluated with observations with the goal of understanding emission, production and removal of these compounds. Anthropogenic and biomass burning are the main sources of aromatic compounds to the atmosphere. The main sink is photochemical decomposition and in lesser importance dry deposition.
H. Fischer, A. Pozzer, T. Schmitt, P. Jöckel, T. Klippel, D. Taraborrelli, and J. Lelieveld
Atmos. Chem. Phys., 15, 6971–6980, https://doi.org/10.5194/acp-15-6971-2015, https://doi.org/10.5194/acp-15-6971-2015, 2015
K. Hens, A. Novelli, M. Martinez, J. Auld, R. Axinte, B. Bohn, H. Fischer, P. Keronen, D. Kubistin, A. C. Nölscher, R. Oswald, P. Paasonen, T. Petäjä, E. Regelin, R. Sander, V. Sinha, M. Sipilä, D. Taraborrelli, C. Tatum Ernest, J. Williams, J. Lelieveld, and H. Harder
Atmos. Chem. Phys., 14, 8723–8747, https://doi.org/10.5194/acp-14-8723-2014, https://doi.org/10.5194/acp-14-8723-2014, 2014
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Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection
On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes
Mercury accumulation in leaves of different plant types – the significance of tissue age and specific leaf area
Isolation of subpollen particles (SPPs) of birch: SPPs are potential carriers of ice nucleating macromolecules
Nina L. H. Kinney, Charles A. Hepburn, Matthew I. Gibson, Daniel Ballesteros, and Thomas F. Whale
Biogeosciences, 21, 3201–3214, https://doi.org/10.5194/bg-21-3201-2024, https://doi.org/10.5194/bg-21-3201-2024, 2024
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Molecules released from plant pollen induce the formation of ice from supercooled water at temperatures warm enough to suggest an underlying function for this activity. In this study we show that ice nucleators are ubiquitous in pollen. We suggest the molecules responsible fulfil some unrelated biological function and nucleate ice incidentally. The ubiquity of ice-nucleating molecules in pollen and particularly active examples reveal a greater potential for pollen to impact weather and climate.
Max Gaber, Yanghui Kang, Guy Schurgers, and Trevor Keenan
Biogeosciences, 21, 2447–2472, https://doi.org/10.5194/bg-21-2447-2024, https://doi.org/10.5194/bg-21-2447-2024, 2024
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Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays a vital role in the carbon cycle. We can measure GPP locally, but producing larger and continuous estimates is challenging. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
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Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Luana Krebs, Susanne Burri, Iris Feigenwinter, Mana Gharun, Philip Meier, and Nina Buchmann
Biogeosciences, 21, 2005–2028, https://doi.org/10.5194/bg-21-2005-2024, https://doi.org/10.5194/bg-21-2005-2024, 2024
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This study explores year-round forest-floor greenhouse gas (GHG) fluxes in a Swiss spruce forest. Soil temperature and snow depth affected forest-floor respiration, while CH4 uptake was linked to snow cover. Negligible N2O fluxes were observed. In 2022, a warm year, CO2 emissions notably increased. The study suggests rising forest-floor GHG emissions due to climate change, impacting carbon sink behavior. Thus, for future forest management, continuous year-round GHG flux measurements are crucial.
Liliana Scapucci, Ankit Shekhar, Sergio Aranda-Barranco, Anastasiia Bolshakova, Lukas Hörtnagl, Mana Gharun, and Nina Buchmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-459, https://doi.org/10.5194/egusphere-2024-459, 2024
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Forests face increased exposure to compound soil and atmospheric drought (CSAD) events with global warming. The study examined CO2 flux responses during CSAD events in a forest over 18 years. Results showed reduced net ecosystem productivity and forest floor respiration during CSAD events, with soil and atmospheric drought as main drivers. We highlighted the importance of pre-conditions, duration and timing of CSAD events to understand their impacts on CO2 fluxes of forest ecosystems.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
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The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Ruben B. Schulte, Jordi Vilà-Guerau de Arellano, Susanna Rutledge-Jonker, Shelley van der Graaf, Jun Zhang, and Margreet C. van Zanten
Biogeosciences, 21, 557–574, https://doi.org/10.5194/bg-21-557-2024, https://doi.org/10.5194/bg-21-557-2024, 2024
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We analyzed measurements with the aim of finding relations between the surface atmosphere exchange of NH3 and the CO2 uptake and transpiration by vegetation. We found a high correlation of daytime NH3 emissions with both latent heat flux and photosynthetically active radiation. Very few simultaneous measurements of NH3, CO2 fluxes and meteorological variables exist at sub-diurnal timescales. This study paves the way to finding more robust relations between the NH3 exchange flux and CO2 uptake.
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
EGUsphere, https://doi.org/10.5194/egusphere-2023-2988, https://doi.org/10.5194/egusphere-2023-2988, 2024
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For improving the accuracy of spatial carbon exchange estimates we show how a simple linear model for net ecosystem exchange (NEE) and gross primary productivity (GPP) can be used for upscaling CO2-exchange for agricultural fields. The models are solely driven by Sentinel-2 derived vegetation indices (VI). Evaluations show that different VIs have variable powers to estimate NEE and GPP of crops in different years. The overall performance though is as good as results from complex crop models.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Carolina Voigt, Nick Rutter, Paul Mann, Jean-Daniel Sylvain, and Alexandre Roy
Biogeosciences, 20, 5087–5108, https://doi.org/10.5194/bg-20-5087-2023, https://doi.org/10.5194/bg-20-5087-2023, 2023
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We present an analysis of soil CO2 emissions in boreal and tundra regions during the non-growing season. We show that when the soil is completely frozen, soil temperature is the main control on CO2 emissions. When the soil is around the freezing point, with a mix of liquid water and ice, the liquid water content is the main control on CO2 emissions. This study highlights that the vegetation–snow–soil interactions must be considered to understand soil CO2 emissions during the non-growing season.
Yuhao Cui, Eri Tachibana, Kimitaka Kawamura, and Yuzo Miyazaki
Biogeosciences, 20, 4969–4980, https://doi.org/10.5194/bg-20-4969-2023, https://doi.org/10.5194/bg-20-4969-2023, 2023
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Fatty alcohols (FAs) are major components of surface lipids in plant leaves and serve as surface-active aerosols. Our study on the aerosol size distributions in a forest suggests that secondary FAs (SFAs) originated from plant waxes and that leaf senescence status is likely an important factor controlling the size distribution of SFAs. This study provides new insights into the sources of primary biological aerosol particles (PBAPs) and their effects on the aerosol ice nucleation activity.
Joyson Ahongshangbam, Liisa Kulmala, Jesse Soininen, Yasmin Frühauf, Esko Karvinen, Yann Salmon, Anna Lintunen, Anni Karvonen, and Leena Järvi
Biogeosciences, 20, 4455–4475, https://doi.org/10.5194/bg-20-4455-2023, https://doi.org/10.5194/bg-20-4455-2023, 2023
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Urban vegetation is important for removing urban CO2 emissions and cooling. We studied the response of urban trees' functions (photosynthesis and transpiration) to a heatwave and drought at four urban green areas in the city of Helsinki. We found that tree water use was increased during heatwave and drought periods, but there was no change in the photosynthesis rates. The heat and drought conditions were severe at the local scale but were not excessive enough to restrict urban trees' functions.
Ryan Vella, Andrea Pozzer, Matthew Forrest, Jos Lelieveld, Thomas Hickler, and Holger Tost
Biogeosciences, 20, 4391–4412, https://doi.org/10.5194/bg-20-4391-2023, https://doi.org/10.5194/bg-20-4391-2023, 2023
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We investigated the effect of the El Niño–Southern Oscillation (ENSO) on biogenic volatile organic compound (BVOC) emissions from plants. ENSO events can cause a significant increase in these emissions, which have a long-term impact on the Earth's atmosphere. Persistent ENSO conditions can cause long-term changes in vegetation, resulting in even higher BVOC emissions. We link ENSO-induced emission anomalies with driving atmospheric and vegetational variables.
Nadav Bekin and Nurit Agam
Biogeosciences, 20, 3791–3802, https://doi.org/10.5194/bg-20-3791-2023, https://doi.org/10.5194/bg-20-3791-2023, 2023
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The mechanisms of soil CO2 flux in dry desert soils are not fully understood. Yet studies conducted in desert ecosystems rarely discuss potential errors related to using the commonly used flux chambers in dry and bare soils. In our study, the conventional deployment practice of the chambers underestimated the instantaneous CO2 flux by up to 50 % and the total daily CO2 uptake by 35 %. This suggests that desert soils are a larger carbon sink than previously reported.
Rosemary J. Eufemio, Ingrid de Almeida Ribeiro, Todd L. Sformo, Gary A. Laursen, Valeria Molinero, Janine Fröhlich-Nowoisky, Mischa Bonn, and Konrad Meister
Biogeosciences, 20, 2805–2812, https://doi.org/10.5194/bg-20-2805-2023, https://doi.org/10.5194/bg-20-2805-2023, 2023
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Lichens, the dominant vegetation in the Arctic, contain ice nucleators (INs) that enable freezing close to 0°C. Yet the abundance, diversity, and function of lichen INs is unknown. Our screening of lichens across Alaska reveal that most species have potent INs. We find that lichens contain two IN populations which retain activity under environmentally relevant conditions. The ubiquity and stability of lichen INs suggest that they may have considerable impacts on local atmospheric patterns.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
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Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
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We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Hamadou Balde, Gabriel Hmimina, Yves Goulas, Gwendal Latouche, and Kamel Soudani
Biogeosciences, 20, 1473–1490, https://doi.org/10.5194/bg-20-1473-2023, https://doi.org/10.5194/bg-20-1473-2023, 2023
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This study focuses on the relationship between sun-induced chlorophyll fluorescence (SIF) and ecosystem gross primary productivity (GPP) across the ICOS European flux tower network. It shows that SIF, coupled with reflectance observations, explains over 80 % of the GPP variability across diverse ecosystems but fails to bring new information compared to reflectance alone at coarse spatial scales (~5 km). These findings have applications in agriculture and ecophysiological studies.
John T. Walker, Xi Chen, Zhiyong Wu, Donna Schwede, Ryan Daly, Aleksandra Djurkovic, A. Christopher Oishi, Eric Edgerton, Jesse Bash, Jennifer Knoepp, Melissa Puchalski, John Iiames, and Chelcy F. Miniat
Biogeosciences, 20, 971–995, https://doi.org/10.5194/bg-20-971-2023, https://doi.org/10.5194/bg-20-971-2023, 2023
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Better estimates of atmospheric nitrogen (N) deposition are needed to accurately assess ecosystem risk and impacts from deposition of nutrients and acidity. Using measurements and modeling, we estimate total N deposition of 6.7 kg N ha−1 yr−1 at a forest site in the southern Appalachian Mountains, a region sensitive to atmospheric deposition. Reductions in deposition of reduced forms of N (ammonia and ammonium) will be needed to meet the lowest estimates of N critical loads for the region.
Yi-Ying Chen and Sebastiaan Luyssaert
Biogeosciences, 20, 349–363, https://doi.org/10.5194/bg-20-349-2023, https://doi.org/10.5194/bg-20-349-2023, 2023
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Tropical cyclones are typically assumed to be associated with ecosystem damage. This study challenges this assumption and suggests that instead of reducing leaf area, cyclones in East Asia may increase leaf area by alleviating water stress.
Deborah F. McGlynn, Graham Frazier, Laura E. R. Barry, Manuel T. Lerdau, Sally E. Pusede, and Gabriel Isaacman-VanWertz
Biogeosciences, 20, 45–55, https://doi.org/10.5194/bg-20-45-2023, https://doi.org/10.5194/bg-20-45-2023, 2023
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Using a custom-made gas chromatography flame ionization detector, 2 years of speciated hourly biogenic volatile organic compound data were collected in a forest in central Virginia. We identify diurnal and seasonal variability in the data, which is shown to impact atmospheric oxidant budgets. A comparison with emission models identified discrepancies with implications for model outcomes. We suggest increased monitoring of speciated biogenic volatile organic compounds to improve modeled results.
Luke D. Schiferl, Jennifer D. Watts, Erik J. L. Larson, Kyle A. Arndt, Sébastien C. Biraud, Eugénie S. Euskirchen, Jordan P. Goodrich, John M. Henderson, Aram Kalhori, Kathryn McKain, Marikate E. Mountain, J. William Munger, Walter C. Oechel, Colm Sweeney, Yonghong Yi, Donatella Zona, and Róisín Commane
Biogeosciences, 19, 5953–5972, https://doi.org/10.5194/bg-19-5953-2022, https://doi.org/10.5194/bg-19-5953-2022, 2022
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As the Arctic rapidly warms, vast stores of thawing permafrost could release carbon dioxide (CO2) into the atmosphere. We combined observations of atmospheric CO2 concentrations from aircraft and a tower with observed CO2 fluxes from tundra ecosystems and found that the Alaskan North Slope in not a consistent source nor sink of CO2. Our study shows the importance of using both site-level and atmospheric measurements to constrain regional net CO2 fluxes and improve biogenic processes in models.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, Richard Kranenburg, and Christian Brümmer
Biogeosciences, 19, 5287–5311, https://doi.org/10.5194/bg-19-5287-2022, https://doi.org/10.5194/bg-19-5287-2022, 2022
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For the first time, we compared four methods for estimating the annual dry deposition of total reactive nitrogen into a low-polluted forest ecosystem. In our analysis, we used 2.5 years of flux measurements, an in situ modeling approach, a large-scale chemical transport model (CTM), and canopy budget models. Annual nitrogen dry deposition budgets ranged between 4.3 and 6.7 kg N ha−1 a−1, depending on the applied method.
Michael Staudt, Juliane Daussy, Joseph Ingabire, and Nafissa Dehimeche
Biogeosciences, 19, 4945–4963, https://doi.org/10.5194/bg-19-4945-2022, https://doi.org/10.5194/bg-19-4945-2022, 2022
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We studied the short- and long-term effects of CO2 as a function of temperature on monoterpene emissions from holm oak. Similarly to isoprene, emissions decreased non-linearly with increasing CO2, with no differences among compounds and chemotypes. The CO2 response was modulated by actual leaf and growth temperature but not by growth CO2. Estimates of annual monoterpene release under double CO2 suggest that CO2 inhibition does not offset the increase in emissions due to expected warming.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
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Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Valery A. Isidorov and Andrej A. Zaitsev
Biogeosciences, 19, 4715–4746, https://doi.org/10.5194/bg-19-4715-2022, https://doi.org/10.5194/bg-19-4715-2022, 2022
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Biogenic volatile organic compounds (VOCs) play a critical role in earth-system processes: they are
main playersin the formation of tropospheric O3 and secondary aerosols, which have a significant impact on climate, human health and crops. A complex mixture of VOCs, formed as a result of physicochemical and biological processes, is released into the atmosphere from the forest floor. This review presents data on the composition of VOCs and contribution of various processes to their emissions.
David S. McLagan, Harald Biester, Tomas Navrátil, Stephan M. Kraemer, and Lorenz Schwab
Biogeosciences, 19, 4415–4429, https://doi.org/10.5194/bg-19-4415-2022, https://doi.org/10.5194/bg-19-4415-2022, 2022
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Spruce and larch trees are effective archiving species for historical atmospheric mercury using growth rings of bole wood. Mercury stable isotope analysis proved an effective tool to characterise industrial mercury signals and assess mercury uptake pathways (leaf uptake for both wood and bark) and mercury cycling within the trees. These data detail important information for understanding the mercury biogeochemical cycle particularly in forest systems.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
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Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
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We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
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The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 19, 3739–3756, https://doi.org/10.5194/bg-19-3739-2022, https://doi.org/10.5194/bg-19-3739-2022, 2022
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A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these net ecosystem exchange (NEE) simulations. Random forests and support vector machines performed better than other algorithms. Models with larger timescales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
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The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
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Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
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This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
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To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
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This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
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The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
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Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Makoto Saito, Tomohiro Shiraishi, Ryuichi Hirata, Yosuke Niwa, Kazuyuki Saito, Martin Steinbacher, Doug Worthy, and Tsuneo Matsunaga
Biogeosciences, 19, 2059–2078, https://doi.org/10.5194/bg-19-2059-2022, https://doi.org/10.5194/bg-19-2059-2022, 2022
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This study tested combinations of two sources of AGB data and two sources of LCC data and used the same burned area satellite data to estimate BB CO emissions. Our analysis showed large discrepancies in annual mean CO emissions and explicit differences in the simulated CO concentrations among the BB emissions estimates. This study has confirmed that BB emissions estimates are sensitive to the land surface information on which they are based.
Johannes Gensheimer, Alexander J. Turner, Philipp Köhler, Christian Frankenberg, and Jia Chen
Biogeosciences, 19, 1777–1793, https://doi.org/10.5194/bg-19-1777-2022, https://doi.org/10.5194/bg-19-1777-2022, 2022
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We develop a convolutional neural network, named SIFnet, that increases the spatial resolution of SIF from TROPOMI by a factor of 10 to a spatial resolution of 0.005°. SIFnet utilizes coarse SIF observations, together with a broad range of high-resolution auxiliary data. The insights gained from interpretable machine learning techniques allow us to make quantitative claims about the relationships between SIF and other common parameters related to photosynthesis.
Shihan Sun, Amos P. K. Tai, David H. Y. Yung, Anthony Y. H. Wong, Jason A. Ducker, and Christopher D. Holmes
Biogeosciences, 19, 1753–1776, https://doi.org/10.5194/bg-19-1753-2022, https://doi.org/10.5194/bg-19-1753-2022, 2022
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We developed and used a terrestrial biosphere model to compare and evaluate widely used empirical dry deposition schemes with different stomatal approaches and found that using photosynthesis-based stomatal approaches can reduce biases in modeled dry deposition velocities in current chemical transport models. Our study shows systematic errors in current dry deposition schemes and the importance of representing plant ecophysiological processes in models under a changing climate.
Ka Ming Fung, Maria Val Martin, and Amos P. K. Tai
Biogeosciences, 19, 1635–1655, https://doi.org/10.5194/bg-19-1635-2022, https://doi.org/10.5194/bg-19-1635-2022, 2022
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Fertilizer-induced ammonia detrimentally affects the environment by not only directly damaging ecosystems but also indirectly altering climate and soil fertility. To quantify these secondary impacts, we enabled CESM to simulate ammonia emission, chemical evolution, and deposition as a continuous cycle. If synthetic fertilizer use is to soar by 30 % from today's level, we showed that the counteracting impacts will increase the global ammonia emission by 3.3 Tg N per year.
Lena Wohlgemuth, Pasi Rautio, Bernd Ahrends, Alexander Russ, Lars Vesterdal, Peter Waldner, Volkmar Timmermann, Nadine Eickenscheidt, Alfred Fürst, Martin Greve, Peter Roskams, Anne Thimonier, Manuel Nicolas, Anna Kowalska, Morten Ingerslev, Päivi Merilä, Sue Benham, Carmen Iacoban, Günter Hoch, Christine Alewell, and Martin Jiskra
Biogeosciences, 19, 1335–1353, https://doi.org/10.5194/bg-19-1335-2022, https://doi.org/10.5194/bg-19-1335-2022, 2022
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Gaseous mercury is present in the atmosphere all over the globe. During the growing season, plants take up mercury from the air in a similar way as CO2. We investigated which factors impact this vegetational mercury uptake by analyzing a large dataset of leaf mercury uptake rates of trees in Europe. As a result, we conclude that mercury uptake is foremost controlled by tree-intrinsic traits like physiological activity but also by climatic factors like dry conditions in the air and in soils.
Junqi Wei, Xiaoyan Li, Lei Liu, Torben Røjle Christensen, Zhiyun Jiang, Yujun Ma, Xiuchen Wu, Hongyun Yao, and Efrén López-Blanco
Biogeosciences, 19, 861–875, https://doi.org/10.5194/bg-19-861-2022, https://doi.org/10.5194/bg-19-861-2022, 2022
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Although water availability has been linked to the response of ecosystem carbon (C) sink–source to climate warming, the mechanisms by which C uptake responds to soil moisture remain unclear. We explored how soil water and other environmental drivers modulate net C uptake in an alpine swamp meadow. Results reveal that nearly saturated soil conditions during warm seasons can help to maintain lower ecosystem respiration and therefore enhance the C sequestration capacity in this alpine swamp meadow.
Martijn M. T. A. Pallandt, Jitendra Kumar, Marguerite Mauritz, Edward A. G. Schuur, Anna-Maria Virkkala, Gerardo Celis, Forrest M. Hoffman, and Mathias Göckede
Biogeosciences, 19, 559–583, https://doi.org/10.5194/bg-19-559-2022, https://doi.org/10.5194/bg-19-559-2022, 2022
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Thawing of Arctic permafrost soils could trigger the release of vast amounts of carbon to the atmosphere, thus enhancing climate change. Our study investigated how well the current network of eddy covariance sites to monitor greenhouse gas exchange at local scales captures pan-Arctic flux patterns. We identified large coverage gaps, e.g., in Siberia, but also demonstrated that a targeted addition of relatively few sites can significantly improve network performance.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, and Christian Brümmer
Biogeosciences, 19, 389–413, https://doi.org/10.5194/bg-19-389-2022, https://doi.org/10.5194/bg-19-389-2022, 2022
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Fluxes of total reactive nitrogen (∑Nr) over a low polluted forest were analyzed with regard to their temporal dynamics. Mostly deposition was observed with median fluxes ranging from −15 to −5 ng N m−2 s−1, corresponding to a range of deposition velocities from 0.2 to 0.5 cm s−1. While seasonally changing contributions of NH3 and NOx to the ∑Nr signal were found, we estimate an annual total N deposition (dry+wet) of 12.2 and 10.9 kg N ha−1 a−1 in the 2 years of observation.
Thomas M. Blattmann
Biogeosciences, 19, 359–373, https://doi.org/10.5194/bg-19-359-2022, https://doi.org/10.5194/bg-19-359-2022, 2022
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This work enunciates the possibility of kerogen oxidation contributing to atmospheric CO2 increase in the wake of glacial episodes. This hypothesis is substantiated by several lines of independent evidence synthesized in this contribution. The author hypothesizes that the deglaciation of kerogen-rich lithologies in western Canada contributed to the characteristic deglacial increase in atmospheric CO2.
Juliana Gil-Loaiza, Joseph R. Roscioli, Joanne H. Shorter, Till H. M. Volkmann, Wei-Ren Ng, Jordan E. Krechmer, and Laura K. Meredith
Biogeosciences, 19, 165–185, https://doi.org/10.5194/bg-19-165-2022, https://doi.org/10.5194/bg-19-165-2022, 2022
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We evaluated a new diffusive soil probe integrated with high-resolution gas analyzers to measure soil gases in real time at a centimeter scale. Using columns with simple silica and soil, we captured changes in carbon dioxide (CO2), volatile organic compounds (VOCs), and nitrous oxide (N2O) with its isotopes to distinguish potential nutrient sources and microbial metabolism. This approach will advance the use of soil gases as important signals to understand and monitor soil fertility and health.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 29–45, https://doi.org/10.5194/bg-19-29-2022, https://doi.org/10.5194/bg-19-29-2022, 2022
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Modeling vegetation canopy is important in predicting whether the land remains a carbon sink to mitigate climate change in the near future. Vegetation canopy model complexity, however, impacts the model-predicted carbon and water fluxes as well as canopy fluorescence, even if the same suite of model inputs is used. Given the biases caused by canopy model complexity, we recommend not misusing parameters inverted using different models or assumptions.
Håkan Pleijel, Jenny Klingberg, Michelle Nerentorp, Malin C. Broberg, Brigitte Nyirambangutse, John Munthe, and Göran Wallin
Biogeosciences, 18, 6313–6328, https://doi.org/10.5194/bg-18-6313-2021, https://doi.org/10.5194/bg-18-6313-2021, 2021
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Mercury is a problematic metal in the environment. It is crucial to understand the Hg circulation in ecosystems. We explored the mercury concentration in foliage from a diverse set of plants, locations and sampling periods to study the accumulation of Hg in leaves–needles over time. Mercury was always higher in older tissue: in broadleaved trees, conifers and wheat. Specific leaf area, the leaf area per unit leaf mass, turned out to be critical for Hg accumulation in leaves–needles.
Julia Burkart, Jürgen Gratzl, Teresa M. Seifried, Paul Bieber, and Hinrich Grothe
Biogeosciences, 18, 5751–5765, https://doi.org/10.5194/bg-18-5751-2021, https://doi.org/10.5194/bg-18-5751-2021, 2021
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Extracts of birch pollen grains are known to be ice nucleation active and thus impact cloud formation and climate. In this study we develop an extraction method to separate subpollen particles from ice nucleating macromolecules. Our results thereby illustrate that ice nucleating macromolecules can be washed off the subpollen particles and that the ice activity is linked to the presence of proteins.
Cited articles
Badgley, G., Fisher, J. B., Jiménez, C., Tu, K. P., and Vinukollu, R.: On Uncertainty in Global Terrestrial Evapotranspiration Estimates from Choice of Input Forcing Datasets, J. Hydrometeorol., 16, 1449–1455, https://doi.org/10.1175/JHM-D-14-0040.1, 2015. a
Barriopedro, D., García-Herrera, R., Ordonez, C., Miralles, D. G., and Salcedo-Sanz, S.: Heat Waves: Physical Understanding and Scientific Challenges, Rev. Geophys., 61, e2022RG000780, https://doi.org/10.1029/2022RG000780, 2023. a
Boone, A., Habets, F., Noilhan, J., Clark, D., Dirmeyer, P., Fox, S., Gusev, Y., Haddeland, I., Koster, R., Lohmann, D., Mahanama, S., Mitchell, K., Nasonova, O., Niu, G.-Y., Pitman, A., Polcher, J., Shmakin, A. B., Tanaka, K., van den Hurk, B., Vérant, S., Verseghy, D., Viterbo, P., and Yang, Z.-L.: The Rhône-Aggregation Land Surface Scheme Intercomparison Project: An Overview, J. Climate, 17, 187–208, https://doi.org/10.1175/1520-0442(2004)017<0187:trlssi>2.0.co;2, 2004. a, b
Calvet, J.-C.: Investigating soil and atmospheric plant water stress using physiological and micrometeorological data, Agr. Forest Meteorol., 103, 229–247, https://doi.org/10.1016/S0168-1923(00)00130-1, 2000. a
Calvet, J.-C., Noilhan, J., Roujean, J.-L., Bessemoulin, P., Cabelguenne, M., Olioso, A., and Wigneron, J.-P.: An interactive vegetation SVAT model tested against data from six contrasting sites, Agr. Forest Meteorol., 92, 73–95, https://doi.org/10.1016/S0168-1923(98)00091-4, 1998. a
Calvet, J.-C., Rivalland, V., Picon-Cochard, C., and Guehl, J.-M.: Modelling forest transpiration and CO2 fluxes–response to soil moisture stress, Agr. Forest Meteorol., 124, 143–156, https://doi.org/10.1016/j.agrformet.2004.01.007, 2004. a
Cao, R., Huang, H., Wu, G., Han, D., Jiang, Z., Di, K., and Hu, Z.: Spatiotemporal variations in the ratio of transpiration to evapotranspiration and its controlling factors across terrestrial biomes, Agr. Forest Meteorol., 321, 108984, https://doi.org/10.1016/j.agrformet.2022.108984, 2022. a
De Kauwe, M. G., Medlyn, B. E., Zaehle, S., Walker, A. P., Dietze, M. C., Hickler, T., Jain, A. K., Luo, Y., Parton, W. J., Prentice, I. C., Smith, B., Thornton, P. E., Wang, S., Wang, Y.-P., Wårlind, D., Weng, E., Crous, K. Y., Ellsworth, D. S., Hanson, P. J., Seok Kim, H., Warren, J. M., Oren, R., and Norby, R. J.: Forest water use and water use efficiency at elevated CO2: a model-data intercomparison at two contrasting temperate forest FACE sites, Global Change Biol., 19, 1759–1779, https://doi.org/10.1111/gcb.12164, 2013. a
Domeisen, D. I. V., Eltahir, E. A. B., Fischer, E. M., Knutti, R., Perkins-Kirkpatrick, S. E., Schär, C., Seneviratne, S. I., Weisheimer, A., and Wernli, H.: Prediction and projection of heatwaves, Nat. Rev. Earth Environ., 4, 36–50, https://doi.org/10.1038/s43017-022-00371-z, 2022. a, b
Dong, J., Lei, F., and Crow, W. T.: Land transpiration-evaporation partitioning errors responsible for modeled summertime warm bias in the central United States, Nat. Commun., 13, 336, https://doi.org/10.1038/s41467-021-27938-6, 2022. a, b
Drake, J. E., Tjoelker, M. G., Vårhammar, A., Medlyn, B. E., Reich, P. B., Leigh, A., Pfautsch, S., Blackman, C. J., López, R., Aspinwall, M. J., Crous, K. Y., Duursma, R. A., Kumarathunge, D., De Kauwe, M. G., Jiang, M., Nicotra, A. B., Tissue, D. T., Choat, B., Atkin, O. K., and Barton, C. V. M.: Trees tolerate an extreme heatwave via sustained transpirational cooling and increased leaf thermal tolerance, Global Change Biol., 24, 2390–2402, https://doi.org/10.1111/gcb.14037, 2018. a
ECMWF: IFS Documentation CY47R3, IFS Documentation, ECMWF, https://doi.org/10.21957/eyrpir4vj, 2021. a, b
Egea, G., Verhoef, A., and Vidale, P. L.: Towards an improved and more flexible representation of water stress in coupled photosynthesis–stomatal conductance models, Agr. Forest Meteorol., 151, 1370–1384, https://doi.org/10.1016/j.agrformet.2011.05.019, 2011. a, b, c
Elnashar, A., Wang, L., Wu, B., Zhu, W., and Zeng, H.: Synthesis of global actual evapotranspiration from 1982 to 2019, Earth Syst. Sci. Data, 13, 447–480, https://doi.org/10.5194/essd-13-447-2021, 2021. a
Emmerichs, T., Kerkweg, A., Ouwersloot, H., Fares, S., Mammarella, I., and Taraborrelli, D.: A revised dry deposition scheme for land–atmosphere exchange of trace gases in ECHAM/MESSy v2.54, Geosci. Model Dev., 14, 495–519, https://doi.org/10.5194/gmd-14-495-2021, 2021. a, b, c
Forzieri, G., Miralles, D. G., Ciais, P., Alkama, R., Ryu, Y., Duveiller, G., Zhang, K., Robertson, E., Kautz, M., Martens, B., Jiang, C., Arneth, A., Georgievski, G., Li, W., Ceccherini, G., Anthoni, P., Lawrence, P., Wiltshire, A., Pongratz, J., Piao, S., Sitch, S., Goll, D. S., Arora, V. K., Lienert, S., Lombardozzi, D., Kato, E., Nabel, J. E. M. S., Tian, H., Friedlingstein, P., and Cescatti, A.: Increased control of vegetation on global terrestrial energy fluxes, Nat. Clim. Change, 10, 356–362, https://doi.org/10.1038/s41558-020-0717-0, 2020. a
Fu, T.-M. and Tian, H.: Climate Change Penalty to Ozone Air Quality: Review of Current Understandings and Knowledge Gaps, Current Pollution Reports, 5, 159–171, https://doi.org/10.1007/s40726-019-00115-6, 2019. a
Giorgetta, M. A., Roeckner, E., Mauritsen, T., Bader, J., Crueger, T., Esch, M., Rast, S., Kornblueh, L., Schmidt, H., Kinne, S., Hohenegger, C., Möbis, B., Krismer, T., Wieners, H., and Stevens, B.: The atmospheric general circulation model ECHAM6: Model description, Reports on Earth System Science, 177, https://doi.org/10.17617/2.1810480, 2013. a
Guanter, L., Bacour, C., Schneider, A., Aben, I., van Kempen, T. A., Maignan, F., Retscher, C., Köhler, P., Frankenberg, C., Joiner, J., and Zhang, Y.: The TROPOSIF global sun-induced fluorescence dataset from the Sentinel-5P TROPOMI mission, Earth Syst. Sci. Data, 13, 5423–5440, https://doi.org/10.5194/essd-13-5423-2021, 2021. a, b, c, d
Guenther, A., Karl, T., Harley, P., Wiedinmyer, C., Palmer, P. I., and Geron, C.: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature), Atmos. Chem. Phys., 6, 3181–3210, https://doi.org/10.5194/acp-6-3181-2006, 2006. a, b, c
Hagemann, S.: An Improved Land Surface Parameter Dataset for Global and Regional Climate Models, Tech. Rep., 336, https://doi.org/10.17617/2.2344576, 2002. a, b
Hagemann, S. and Stacke, T.: Impact of the soil hydrology scheme on simulated soil moisture memory, Clim. Dynam., 44, 1731–1750, https://doi.org/10.1007/s00382-014-2221-6, 2015. a, b, c, d
Harper, A. B., Williams, K. E., McGuire, P. C., Duran Rojas, M. C., Hemming, D., Verhoef, A., Huntingford, C., Rowland, L., Marthews, T., Breder Eller, C., Mathison, C., Nobrega, R. L. B., Gedney, N., Vidale, P. L., Otu-Larbi, F., Pandey, D., Garrigues, S., Wright, A., Slevin, D., De Kauwe, M. G., Blyth, E., Ardö, J., Black, A., Bonal, D., Buchmann, N., Burban, B., Fuchs, K., de Grandcourt, A., Mammarella, I., Merbold, L., Montagnani, L., Nouvellon, Y., Restrepo-Coupe, N., and Wohlfahrt, G.: Improvement of modeling plant responses to low soil moisture in JULESvn4.9 and evaluation against flux tower measurements, Geosci. Model Dev., 14, 3269–3294, https://doi.org/10.5194/gmd-14-3269-2021, 2021. a
Iturbide, M., Gutiérrez, J. M., Alves, L. M., Bedia, J., Cerezo-Mota, R., Cimadevilla, E., Cofiño, A. S., Di Luca, A., Faria, S. H., Gorodetskaya, I. V., Hauser, M., Herrera, S., Hennessy, K., Hewitt, H. T., Jones, R. G., Krakovska, S., Manzanas, R., Martínez-Castro, D., Narisma, G. T., Nurhati, I. S., Pinto, I., Seneviratne, S. I., van den Hurk, B., and Vera, C. S.: An update of IPCC climate reference regions for subcontinental analysis of climate model data: definition and aggregated datasets, Earth Syst. Sci. Data, 12, 2959–2970, https://doi.org/10.5194/essd-12-2959-2020, 2020. a
Jacobs, C. M. J., van den Hurk, B. M. M., and de Bruin, H. A. R.: Stomata1 behaviour and photosynthetic rate of unstressed grapevines in semi-arid conditions, Agr. Forest Meteorol., 24, https://doi.org/10.1016/0168-1923(95)02295-3, 1994. a
Jiang, X., Niu, G.-Y., and Yang, Z.-L.: Impacts of vegetation and groundwater dynamics on warm season precipitation over the Central United States, J. Geophys. Res.-Atmos., 114, D06109, https://doi.org/10.1029/2008JD010756, 2009. a
Jöckel, P., Kerkweg, A., Pozzer, A., Sander, R., Tost, H., Riede, H., Baumgaertner, A., Gromov, S., and Kern, B.: Development cycle 2 of the Modular Earth Submodel System (MESSy2), Geosci. Model Dev., 3, 717–752, https://doi.org/10.5194/gmd-3-717-2010, 2010. a, b
Jöckel, P., Tost, H., Pozzer, A., Kunze, M., Kirner, O., Brenninkmeijer, C. A. M., Brinkop, S., Cai, D. S., Dyroff, C., Eckstein, J., Frank, F., Garny, H., Gottschaldt, K.-D., Graf, P., Grewe, V., Kerkweg, A., Kern, B., Matthes, S., Mertens, M., Meul, S., Neumaier, M., Nützel, M., Oberländer-Hayn, S., Ruhnke, R., Runde, T., Sander, R., Scharffe, D., and Zahn, A.: Earth System Chemistry integrated Modelling (ESCiMo) with the Modular Earth Submodel System (MESSy) version 2.51, Geosci. Model Dev., 9, 1153–1200, https://doi.org/10.5194/gmd-9-1153-2016, 2016. a, b, c, d, e
Jülich Supercomputing Centre: JUWELS: Modular Tier-0/1 Supercomputer at the Jülich Supercomputing Centre, Journal of Large-Scale Research Facilities, 5, A135, https://doi.org/10.17815/jlsrf-5-171, 2019. a
Jülich Supercomputing Centre: JURECA: Data Centric and Booster Modules implementing the Modular Supercomputing Architecture at Jülich Supercomputing Centre, Journal of Large-Scale Research Facilities, 7, A182, https://doi.org/10.17815/jlsrf-7-182, 2021. a
Kala, J., De Kauwe, M. G., Pitman, A. J., Medlyn, B. E., Wang, Y.-P., Lorenz, R., and Perkins-Kirkpatrick, S. E.: Impact of the representation of stomatal conductance on model projections of heatwave intensity, Sci. Rep.-UK, 6, 23418, https://doi.org/10.1038/srep23418, 2016. a, b
Katul, G. G., Palmroth, S., and Oren, R.: Leaf stomatal responses to vapour pressure deficit under current and CO2-enriched atmosphere explained by the economics of gas exchange, Plant Cell Environ., 32, 968–979, https://doi.org/10.1111/j.1365-3040.2009.01977.x, 2009. a
Katul, G. G., Oren, R., Manzoni, S., Higgins, C., and Parlange, M. B.: Evapotranspiration: A process driving mass transport and energy exchange in the soil-plant-atmosphere-climate system, Rev. Geophys., 50, RG3002, https://doi.org/10.1029/2011RG000366, 2012. a
Keenan, T., Sabate, S., and Gracia, C.: Soil water stress and coupled photosynthesis–conductance models: Bridging the gap between conflicting reports on the relative roles of stomatal, mesophyll conductance and biochemical limitations to photosynthesis, Agr. Forest Meteorol., 150, 443–453, https://doi.org/10.1016/j.agrformet.2010.01.008, 2010. a, b
Kennedy, D., Swenson, S., Oleson, K. W., Lawrence, D. M., Fisher, R., Lola da Costa, A. C., and Gentine, P.: Implementing Plant Hydraulics in the Community Land Model, Version 5, J. Adv. Model. Earth Sy., 11, 485–513, https://doi.org/10.1029/2018MS001500, 2019. a, b, c
Kerkweg, A., Buchholz, J., Ganzeveld, L., Pozzer, A., Tost, H., and Jöckel, P.: Technical Note: An implementation of the dry removal processes DRY DEPosition and SEDImentation in the Modular Earth Submodel System (MESSy), Atmos. Chem. Phys., 6, 4617–4632, https://doi.org/10.5194/acp-6-4617-2006, 2006. a, b
Klein, T.: The variability of stomatal sensitivity to leaf water potential across tree species indicates a continuum between isohydric and anisohydric behaviours, Funct. Ecol., 28, 1313–1320, https://doi.org/10.1111/1365-2435.12289, 2014. a
Knohl, A. and Baldocchi, D. D.: Effects of diffuse radiation on canopy gas exchange processes in a forest ecosystem, J. Geophys. Res.-Biogeo., 113, G02023, https://doi.org/10.1029/2007JG000663, 2008. a
Kollet, S. J. and Maxwell, R. M.: Capturing the influence of groundwater dynamics on land surface processes using an integrated, distributed watershed model, Water Resour. Res., 44, W02402, https://doi.org/10.1029/2007WR006004, 2008. a
Kozlowski, T. T., Kramer, P. J., and Pallardy, S. G.: The Physiological Ecology of Woody Plants, Tree Physiol., 8, 213, https://doi.org/10.1093/treephys/8.2.213, 1991. a, b
Lam, A., Karssenberg, D., van den Hurk, B. J. J. M., and Bierkens, M. F. P.: Spatial and temporal connections in groundwater contribution to evaporation, Hydrol. Earth Syst. Sci., 15, 2621–2630, https://doi.org/10.5194/hess-15-2621-2011, 2011. a
Larsen, M. A. D., Refsgaard, J. C., Drews, M., Butts, M. B., Jensen, K. H., Christensen, J. H., and Christensen, O. B.: Results from a full coupling of the HIRHAM regional climate model and the MIKE SHE hydrological model for a Danish catchment, Hydrol. Earth Syst. Sci., 18, 4733–4749, https://doi.org/10.5194/hess-18-4733-2014, 2014. a
Lian, X., Piao, S., Huntingford, C., Li, Y., Zeng, Z., Wang, X., Ciais, P., McVicar, T. R., Peng, S., Ottlé, C., Yang, H., Yang, Y., Zhang, Y., and Wang, T.: Partitioning global land evapotranspiration using CMIP5 models constrained by observations, Nat. Clim. Change, 8, 640–646, https://doi.org/10.1038/s41558-018-0207-9, 2018. a, b, c, d, e
Maes, W. H., Pagán, B. R., Martens, B., Gentine, P., Guanter, L., Steppe, K., Verhoest, N. E. C., Dorigo, W., Li, X., Xiao, J., and Miralles, D. G.: Sun-induced fluorescence closely linked to ecosystem transpiration as evidenced by satellite data and radiative transfer models, Remote Sens. Environ., 249, 112030, https://doi.org/10.1016/j.rse.2020.112030, 2020. a, b, c
Martini, D., Sakowska, K., Wohlfahrt, G., Pacheco-Labrador, J., van der Tol, C., Porcar-Castell, A., Magney, T. S., Carrara, A., Colombo, R., El-Madany, T. S., Gonzalez-Cascon, R., Martín, M. P., Julitta, T., Moreno, G., Rascher, U., Reichstein, M., Rossini, M., and Migliavacca, M.: Heatwave breaks down the linearity between sun-induced fluorescence and gross primary production, New Phytol., 233, 2415–2428, https://doi.org/10.1111/nph.17920, 2022. a
Millar, A. A., Jensen, R. E., Bauer, A., and Norum, E. B.: Influence of atmospheric and soil environmental parameters on the diurnal fluctuations of leaf water status of barley, Agr. Meteorol., 8, 93–105, https://doi.org/10.1016/0002-1571(71)90099-9, 1971. a
Miralles, D. G., Holmes, T. R. H., De Jeu, R. A. M., Gash, J. H., Meesters, A. G. C. A., and Dolman, A. J.: Global land-surface evaporation estimated from satellite-based observations, Hydrol. Earth Syst. Sci., 15, 453–469, https://doi.org/10.5194/hess-15-453-2011, 2011. a
Miralles, D. G., Gentine, P., Seneviratne, S. I., and Teuling, A. J.: Land-atmospheric feedbacks during droughts and heatwaves: state of the science and current challenges, Ann. NY Acad. Sci., 1436, 19–35, https://doi.org/10.1111/nyas.13912, 2019. a
Nairn, J. R. and Fawcett, R. J. B.: The excess heat factor: a metric for heatwave intensity and its use in classifying heatwave severity, Int. J. Env. Res. Pub. He., 12, 227–253, https://doi.org/10.3390/ijerph120100227, 2014. a, b
NOVELTI, UPV, SRON, LSCE, and ESA: The TROPOSIF global sun-induced fluorescence dataset from the TROPOMI mission, https://doi.org/10.5270/esa-s5p_innovation-sif-20180501_20210320-v2.1-202104, 2021. a, b, c, d
Paço, T. A. d., Ferreira, M. I., and Pacheco, C. A.: Scheduling peach orchard irrigation in water stress conditions: use of relative transpiration and predawn leaf water potential, Fruits, 68, 147–158, https://doi.org/10.1051/fruits/2013061, 2013. a
Palmer, P. I., Jacob, D. J., Fiore, A. M., Martin, R. V., Chance, K., and Kurosu, T. P.: Mapping isoprene emissions over North America using formaldehyde column observations from space, J. Geophys. Res.-Atmos., 108, 4180, https://doi.org/10.1029/2002JD002153, 2003. a
Pan, S., Pan, N., Tian, H., Friedlingstein, P., Sitch, S., Shi, H., Arora, V. K., Haverd, V., Jain, A. K., Kato, E., Lienert, S., Lombardozzi, D., Nabel, J. E. M. S., Ottlé, C., Poulter, B., Zaehle, S., and Running, S. W.: Evaluation of global terrestrial evapotranspiration using state-of-the-art approaches in remote sensing, machine learning and land surface modeling, Hydrol. Earth Syst. Sci., 24, 1485–1509, https://doi.org/10.5194/hess-24-1485-2020, 2020. a, b, c, d, e, f
Pitman, A. J.: The evolution of, and revolution in, land surface schemes designed for climate models, Int. J. Climatol., 23, 479–510, 2003. a
Pollard, D. and Thompson, S. L.: Use of a land-surface-transfer scheme (LSX) in a global climate model: the response to doubling stomatal resistance, Results from the Model Evaluation Consortium for Climate Assessment, 10, 129–161, http://www.sciencedirect.com/science/article/pii/0921818194000237 (last access: 13 February 2024), 1995. a
Pusede, S. E., Steiner, A. L., and Cohen, R. C.: Temperature and Recent Trends in the Chemistry of Continental Surface Ozone, Chem. Rev., 115, 3898–3918, https://doi.org/10.1021/cr5006815, 2015. a
Rahman, M., Sulis, M., and Kollet, S. J.: The concept of dual-boundary forcing in land surface-subsurface interactions of the terrestrial hydrologic and energy cycles, Water Resour. Res., 50, 8531–8548, https://doi.org/10.1002/2014WR015738, 2014. a
Rasmussen, D. J., Hu, J., Mahmud, A., and Kleeman, M. J.: The Ozone–Climate Penalty: Past, Present, and Future, Environ. Sci. Technol., 47, 14258–14266, https://doi.org/10.1021/es403446m, 2013. a
Robock, A., Schlosser, C. A., Vinnikov, K. Y., Speranskaya, N. A., Entin, J. K., and Qiu, S.: Evaluation of the AMIP soil moisture simulations, Global Planet. Change, 19, 181–208, https://doi.org/10.1016/S0921-8181(98)00047-2, 1998. a, b
Roeckner, E., Bäuml, G., Bonaventura, L., Brokopf, R., Esch, M., Giorgetta, M., Hagemann, S., Kirchner, I., Kornblueh, L., Manzini, E., Rhodin, A., Schlese, U., Schulzweida, U., and Tompkins, A.: The atmospheric general circulation model ECHAM 5. PART I: Model description, MPI report, Max-Planck-Institut für Meteorologie, 2003. a, b
Rogers, A., Medlyn, B. E., Dukes, J. S., Bonan, G., von Caemmerer, S., Dietze, M. C., Kattge, J., Leakey, A. D. B., Mercado, L. M., Niinemets, U., Prentice, I. C., Serbin, S. P., Sitch, S., Way, D. A., and Zaehle, S.: A roadmap for improving the representation of photosynthesis in Earth system models, New Phytol., 213, 22–42, https://doi.org/10.1111/nph.14283, 2017. a, b, c
Sabot, M. E. B., De Kauwe, M. G., Pitman, A. J., Medlyn, B. E., Ellsworth, D. S., Martin-StPaul, N. K., Wu, J., Choat, B., Limousin, J.-M., Mitchell, P. J., Rogers, A., and Serbin, S. P.: One Stomatal Model to Rule Them All? Toward Improved Representation of Carbon and Water Exchange in Global Models, J. Adv. Model. Earth Sy., 14, e2021MS002761, https://doi.org/10.1029/2021MS002761, 2022. a, b
Sadiq, M., Tai, A. P. K., Lombardozzi, D., and Val Martin, M.: Effects of ozone–vegetation coupling on surface ozone air quality via biogeochemical and meteorological feedbacks, Atmos. Chem. Phys., 17, 3055–3066, https://doi.org/10.5194/acp-17-3055-2017, 2017. a
Schulz, J.-P., Dümenil, L., and Polcher, J.: On the land surface–atmosphere coupling and its impact in a single-column atmospheric model, J. Appl. Meteorol., 40, 642–663, https://doi.org/10.1175/1520-0450(2001)040<0642:OTLSAC>2.0.CO;2, 2001. a, b, c, d
Sellers, P., Dickinson, R. E., Randall, D., Betts, A., Hall, F., Berry, J., Collatz, G., Denning, A., Mooney, H., Nobre, C., Sato, N., Field, C. B., and Henderson-Sellers, A.: Modeling the exchanges of energy, water, and carbon between continents and the atmosphere, Science, 275, 502–509, https://doi.org/10.1126/science.275.5299.502, 1997. a, b, c, d
Seneviratne, S. I., Corti, T., Davin, E. L., Hirschi, M., Jaeger, E. B., Lehner, I., Orlowsky, B., and Teuling, A. J.: Investigating soil moisture–climate interactions in a changing climate: A review, Earth-Sci. Rev., 99, 125–161, https://doi.org/10.1016/j.earscirev.2010.02.004, 2010. a, b, c, d, e, f
Shao, Y. and Henderson-Sellers, A.: Modeling soil moisture: A Project for Intercomparison of Land Surface Parameterization Schemes Phase 2(b), J. Geophys. Res., 101, 7227–7250, https://doi.org/10.1029/95JD03275, 1996. a
Shepherd, T. G. , Boyd E., Calel, R. A., Chapman, S. C., Dessai, S., Dima-West, I. M., Fowler, H. J., James, R., Maraun D., Martius, O., Senior, C. A., Sobel A. H., Stainforth, D. A., Tett, S. F. B., Trenberth, K. E., van den Hurk, B. J. J. M., Watkins, N. W., Wilby, R. L., and Zenghelis, D. A.: Storylines: an alternative approach to representing uncertainty in physical aspects of climate change, Climatic Change, 151, 555–571, https://doi.org/10.1007/s10584-018-2317-9, 2018. a
Stevens, B., Giorgetta, M., Esch, M., Mauritsen, T., Crueger, T., Rast, S., Salzmann, M., Schmidt, H., Bader, J., Block, K., Brokopf, R., Fast, I., Kinne, S., Kornblueh, L., Lohmann, U., Pincus, R., Reichler, T., and Roeckner, E.: Atmospheric component of the MPI-M Earth System Model: ECHAM6, J. Adv. Model. Earth Sy., 5, 146–172, https://doi.org/10.1002/jame.20015, 2013. a
Thépaut, J.-N., Dee, D., Engelen, R., and Pinty, B.: The Copernicus programme and its climate change service, in: IGARSS 2018 – 2018 IEEE International Geoscience and Remote Sensing Symposium, 1591–1593, IEEE, https://doi.org/10.1109/IGARSS.2018.8518067, 2018. a
Tost, H., Jöckel, P., Kerkweg, A., Sander, R., and Lelieveld, J.: Technical note: A new comprehensive SCAVenging submodel for global atmospheric chemistry modelling, Atmos. Chem. Phys., 6, 565–574, https://doi.org/10.5194/acp-6-565-2006, 2006. a
Trigo, I. F., Dacamara, C. C., Viterbo, P., Roujean, J.-L., Olesen, F., Barroso, C., Camacho-de Coca, F., Carrer, D., Freitas, S. C., Garcia-Haro, J., Geiger, B., Gellens-Meulenberghs, F., Ghilain, N., Melia, J., Pessanha, L., Siljamo, N., and Arboleda, A.: The Satellite Application Facility for Land Surface Analysis, Int. J. Remote Sens., 32, 2725–2744, https://doi.org/10.1080/01431161003743199, 2011. a
Tuzet, A., Perrier, A., and Leuning, R.: A coupled model of stomatal conductance, photosynthesis and transpiration, Plant Cell Environ., 26, 1097–1116, https://doi.org/10.1046/j.1365-3040.2003.01035.x, 2003. a
Utset, A., Farre, I., Martinez-Cob, A., and Cavero, J.: Comparing Penman–Monteith and Priestley–Taylor approaches as reference-evapotranspiration inputs for modeling maize water-use under Mediterranean conditions, Agr. Water Manage., 66, 205–219, https://doi.org/10.1016/j.agwat.2003.12.003, 2004. a
Verhoef, A. and Egea, G.: Modeling plant transpiration under limited soil water: Comparison of different plant and soil hydraulic parameterizations and preliminary implications for their use in land surface models, Agr. Forest Meteorol., 191, 22–32, https://doi.org/10.1016/j.agrformet.2014.02.009, 2014. a, b, c, d, e, f, g
Wang, B., Yue, X., Zhou, H., and Zhu, J.: Impact of diffuse radiation on evapotranspiration and its coupling to carbon fluxes at global FLUXNET sites, Agr. Forest Meteorol., 322, 109006, https://doi.org/10.1016/j.agrformet.2022.109006, 2022. a
Wang, K. and Dickinson, R. E.: A review of global terrestrial evapotranspiration: Observation, modeling, climatology, and climatic variability, Rev. Geophys., 50, RG2005, https://doi.org/10.1029/2011RG000373, 2012. a, b, c
Wang, Z., Zhan, C., Ning, L., and Guo, H.: Evaluation of global terrestrial evapotranspiration in CMIP6 models, Theor. Appl. Climatol., 143, 521–531, https://doi.org/10.1007/s00704-020-03437-4, 2021. a, b
Xiao, J., Fisher, J. B., Hashimoto, H., Ichii, K., and Parazoo, N. C.: Emerging satellite observations for diurnal cycling of ecosystem processes, Nat. Plants, 7, 877–887, https://doi.org/10.1038/s41477-021-00952-8, 2021. a
Xiao, Z., Liang, S., and Jiang, B.: Evaluation of four long time-series global leaf area index products, Agr. Forest Meteorol., 246, 218–230, https://doi.org/10.1016/j.agrformet.2017.06.016, 2017. a
Zanis, P., Akritidis, D., Turnock, S., Naik, V., Szopa, S., Georgoulias, A. K., Bauer, S. E., Deushi, M., Horowitz, L. W., Keeble, J., Sager, P. L., O'Connor, F. M., Oshima, N., Tsigaridis, K., and van Noije, T.: Climate change penalty and benefit on surface ozone: a global perspective based on CMIP6 earth system models, Environ. Res. Lett., 17, 024014, https://doi.org/10.1088/1748-9326/ac4a34, 2022. a
Zhang, L., Brook, J. R., and Vet, R.: A revised parameterization for gaseous dry deposition in air-quality models, Atmos. Chem. Phys., 3, 2067–2082, https://doi.org/10.5194/acp-3-2067-2003, 2003. a, b, c
Zhang, Y., Chiew, F. H. S., Peña-Arancibia, J., Sun, F., Li, H., and Leuning, R.: Global variation of transpiration and soil evaporation and the role of their major climate drivers, J. Geophys. Res.-Atmos., 122, 6868–6881, https://doi.org/10.1002/2017JD027025, 2017. a
Zhou, S., Duursma, R. A., Medlyn, B. E., Kelly, J. W. G., and Prentice, I. C.: How should we model plant responses to drought? An analysis of stomatal and non-stomatal responses to water stress, Agr. Forest Meteorol., 182–183, 204–214, https://doi.org/10.1016/j.agrformet.2013.05.009, 2013. a
Short summary
We assess the representation of the plant response to surface water in a global atmospheric chemistry model. This sensitivity is crucial for the return of precipitation back into the atmosphere and thus significantly impacts the representation of weather as well as air quality. The newly implemented response function reduces this process and has a better comparison with satellite observations. This yields a higher intensity of unusual warm periods and higher production of air pollutants.
We assess the representation of the plant response to surface water in a global atmospheric...
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