Articles | Volume 19, issue 10
https://doi.org/10.5194/bg-19-2557-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-19-2557-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Assimilation of passive microwave vegetation optical depth in LDAS-Monde: a case study over the continental USA
Anthony Mucia
CNRM, Université de Toulouse, Météo-France, CNRS, 31057, Toulouse, France
Bertrand Bonan
CNRM, Université de Toulouse, Météo-France, CNRS, 31057, Toulouse, France
Clément Albergel
CNRM, Université de Toulouse, Météo-France, CNRS, 31057, Toulouse, France
European Space Agency Climate Office, ECSAT, Harwell Campus, Oxfordshire, Didcot, OX11 0FD, UK
Yongjun Zheng
CNRM, Université de Toulouse, Météo-France, CNRS, 31057, Toulouse, France
Jean-Christophe Calvet
CORRESPONDING AUTHOR
CNRM, Université de Toulouse, Météo-France, CNRS, 31057, Toulouse, France
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Hydrol. Earth Syst. Sci., 27, 1221–1242, https://doi.org/10.5194/hess-27-1221-2023, https://doi.org/10.5194/hess-27-1221-2023, 2023
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Hydrol. Earth Syst. Sci., 26, 3611–3627, https://doi.org/10.5194/hess-26-3611-2022, https://doi.org/10.5194/hess-26-3611-2022, 2022
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Judith Eeckman, Hélène Roux, Audrey Douinot, Bertrand Bonan, and Clément Albergel
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Clément Albergel, Yongjun Zheng, Bertrand Bonan, Emanuel Dutra, Nemesio Rodríguez-Fernández, Simon Munier, Clara Draper, Patricia de Rosnay, Joaquin Muñoz-Sabater, Gianpaolo Balsamo, David Fairbairn, Catherine Meurey, and Jean-Christophe Calvet
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Yongjun Zheng, Clément Albergel, Simon Munier, Bertrand Bonan, and Jean-Christophe Calvet
Geosci. Model Dev., 13, 3607–3625, https://doi.org/10.5194/gmd-13-3607-2020, https://doi.org/10.5194/gmd-13-3607-2020, 2020
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This study proposes a sophisticated dynamically running job scheme as well as an innovative parallel IO algorithm to reduce the time to solution of an offline framework for high-dimensional ensemble Kalman filters. The offline and online modes of ensemble Kalman filters are built to comprehensively assess their time to solution efficiencies. The offline mode is substantially faster than the online mode in terms of time to solution, especially for large-scale assimilation problems.
Bertrand Bonan, Clément Albergel, Yongjun Zheng, Alina Lavinia Barbu, David Fairbairn, Simon Munier, and Jean-Christophe Calvet
Hydrol. Earth Syst. Sci., 24, 325–347, https://doi.org/10.5194/hess-24-325-2020, https://doi.org/10.5194/hess-24-325-2020, 2020
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This paper introduces an ensemble square root filter (EnSRF), a deterministic ensemble Kalman filter, for jointly assimilating observations of the surface soil moisture and leaf area index in the Land Data Assimilation System LDAS-Monde. LDAS-Monde constrains the Interaction between Soil, Biosphere and Atmosphere (ISBA) land surface model to improve the reanalysis of land surface variables. EnSRF is compared with the simplified extended Kalman filter over the European Mediterranean region.
Andreas Müller, Willem Deconinck, Christian Kühnlein, Gianmarco Mengaldo, Michael Lange, Nils Wedi, Peter Bauer, Piotr K. Smolarkiewicz, Michail Diamantakis, Sarah-Jane Lock, Mats Hamrud, Sami Saarinen, George Mozdzynski, Daniel Thiemert, Michael Glinton, Pierre Bénard, Fabrice Voitus, Charles Colavolpe, Philippe Marguinaud, Yongjun Zheng, Joris Van Bever, Daan Degrauwe, Geert Smet, Piet Termonia, Kristian P. Nielsen, Bent H. Sass, Jacob W. Poulsen, Per Berg, Carlos Osuna, Oliver Fuhrer, Valentin Clement, Michael Baldauf, Mike Gillard, Joanna Szmelter, Enda O'Brien, Alastair McKinstry, Oisín Robinson, Parijat Shukla, Michael Lysaght, Michał Kulczewski, Milosz Ciznicki, Wojciech Piątek, Sebastian Ciesielski, Marek Błażewicz, Krzysztof Kurowski, Marcin Procyk, Pawel Spychala, Bartosz Bosak, Zbigniew P. Piotrowski, Andrzej Wyszogrodzki, Erwan Raffin, Cyril Mazauric, David Guibert, Louis Douriez, Xavier Vigouroux, Alan Gray, Peter Messmer, Alexander J. Macfaden, and Nick New
Geosci. Model Dev., 12, 4425–4441, https://doi.org/10.5194/gmd-12-4425-2019, https://doi.org/10.5194/gmd-12-4425-2019, 2019
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Md Abul Ehsan Bhuiyan, Efthymios I. Nikolopoulos, Emmanouil N. Anagnostou, Jan Polcher, Clément Albergel, Emanuel Dutra, Gabriel Fink, Alberto Martínez-de la Torre, and Simon Munier
Hydrol. Earth Syst. Sci., 23, 1973–1994, https://doi.org/10.5194/hess-23-1973-2019, https://doi.org/10.5194/hess-23-1973-2019, 2019
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Sibo Zhang, Catherine Meurey, and Jean-Christophe Calvet
Atmos. Chem. Phys., 19, 5005–5020, https://doi.org/10.5194/acp-19-5005-2019, https://doi.org/10.5194/acp-19-5005-2019, 2019
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Yongjun Zheng and Philippe Marguinaud
Geosci. Model Dev., 11, 3409–3426, https://doi.org/10.5194/gmd-11-3409-2018, https://doi.org/10.5194/gmd-11-3409-2018, 2018
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The impacts of collective algorithms, interconnect topologies, and routing algorithms on the performance and scalability of transpositions, halo exchanges, and allreduce operations are significant. The performance of communications can be improved when the congestion is mitigated by a proper configuration of the topology and a congestion-balanced routing algorithm. The scalability of the spectral models could be acceptable for exascale supercomputers.
Clement Albergel, Emanuel Dutra, Simon Munier, Jean-Christophe Calvet, Joaquin Munoz-Sabater, Patricia de Rosnay, and Gianpaolo Balsamo
Hydrol. Earth Syst. Sci., 22, 3515–3532, https://doi.org/10.5194/hess-22-3515-2018, https://doi.org/10.5194/hess-22-3515-2018, 2018
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Emiliano Gelati, Bertrand Decharme, Jean-Christophe Calvet, Marie Minvielle, Jan Polcher, David Fairbairn, and Graham P. Weedon
Hydrol. Earth Syst. Sci., 22, 2091–2115, https://doi.org/10.5194/hess-22-2091-2018, https://doi.org/10.5194/hess-22-2091-2018, 2018
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We compared land surface model simulations forced by several meteorological datasets with observations over the Euro-Mediterranean area, for the 1979–2012 period. Precipitation was the most uncertain forcing variable. The impacts of forcing uncertainty were larger on the mean and standard deviation rather than the timing, shape and inter-annual variability of simulated discharge. Simulated leaf area index and surface soil moisture were relatively insensitive to these uncertainties.
Sibo Zhang, Jean-Christophe Calvet, José Darrozes, Nicolas Roussel, Frédéric Frappart, and Gilles Bouhours
Hydrol. Earth Syst. Sci., 22, 1931–1946, https://doi.org/10.5194/hess-22-1931-2018, https://doi.org/10.5194/hess-22-1931-2018, 2018
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Surface soil moisture was retrieved from a grassland site in southwestern France using the GNSS-IR technique. In order to efficiently limit the impact of perturbing vegetation effects, the grass growth period and the senescence period are treated separately. While the vegetation biomass effect can be corrected for, the litter water interception influences the observations and cannot be easily accounted for.
Clément Albergel, Simon Munier, Delphine Jennifer Leroux, Hélène Dewaele, David Fairbairn, Alina Lavinia Barbu, Emiliano Gelati, Wouter Dorigo, Stéphanie Faroux, Catherine Meurey, Patrick Le Moigne, Bertrand Decharme, Jean-Francois Mahfouf, and Jean-Christophe Calvet
Geosci. Model Dev., 10, 3889–3912, https://doi.org/10.5194/gmd-10-3889-2017, https://doi.org/10.5194/gmd-10-3889-2017, 2017
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LDAS-Monde, a global land data assimilation system, is applied over Europe and the Mediterranean basin to increase monitoring accuracy for land surface variables. It is able to ingest information from satellite-derived surface soil moisture (SSM) and leaf area index (LAI) observations to constrain the ISBA land surface model coupled with the CTRIP continental hydrological system. Assimilation of SSM and LAI leads to a better representation of evapotranspiration and gross primary production.
Nemesio J. Rodríguez-Fernández, Joaquin Muñoz Sabater, Philippe Richaume, Patricia de Rosnay, Yann H. Kerr, Clement Albergel, Matthias Drusch, and Susanne Mecklenburg
Hydrol. Earth Syst. Sci., 21, 5201–5216, https://doi.org/10.5194/hess-21-5201-2017, https://doi.org/10.5194/hess-21-5201-2017, 2017
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The new SMOS satellite near-real-time (NRT) soil moisture (SM) product based on a neural network is presented. The NRT SM product has been evaluated with respect to the SMOS Level 2 product and against a large number of in situ measurements showing performances similar to those of the Level 2 product but it is available in less than 3.5 h after sensing. The new product is distributed by the European Space Agency and the European Organisation for the Exploitation of Meteorological Satellites.
Hélène Dewaele, Simon Munier, Clément Albergel, Carole Planque, Nabil Laanaia, Dominique Carrer, and Jean-Christophe Calvet
Hydrol. Earth Syst. Sci., 21, 4861–4878, https://doi.org/10.5194/hess-21-4861-2017, https://doi.org/10.5194/hess-21-4861-2017, 2017
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Soil maximum available water content (MaxAWC) is a key parameter in land surface models. Being difficult to measure, this parameter is usually unavailable. A 15-year time series of satellite-derived observations of leaf area index (LAI) is used to retrieve MaxAWC for rainfed straw cereals over France. Disaggregated LAI is sequentially assimilated into the ISBA LSM. MaxAWC is estimated minimising LAI analyses increments. Annual maximum LAI observations correlate with the MaxAWC estimates.
Sibo Zhang, Nicolas Roussel, Karen Boniface, Minh Cuong Ha, Frédéric Frappart, José Darrozes, Frédéric Baup, and Jean-Christophe Calvet
Hydrol. Earth Syst. Sci., 21, 4767–4784, https://doi.org/10.5194/hess-21-4767-2017, https://doi.org/10.5194/hess-21-4767-2017, 2017
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GNSS SNR data were obtained from an intensively cultivated wheat field in southwestern France. The data were used to retrieve soil moisture and vegetation characteristics during the growing period of wheat. Vegetation growth broke up the constant height assumption used in soil moisture retrieval algorithms. Soil moisture could not be retrieved after wheat tillering. A new algorithm based on a wavelet analysis was implemented and used to retrieve vegetation height.
Bertrand Bonan, Nancy K. Nichols, Michael J. Baines, and Dale Partridge
Nonlin. Processes Geophys., 24, 515–534, https://doi.org/10.5194/npg-24-515-2017, https://doi.org/10.5194/npg-24-515-2017, 2017
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We develop data assimilation techniques for numerical models using moving mesh methods. Moving meshes are valuable for explicitly tracking interfaces and boundaries in evolving systems. The application of the techniques is demonstrated on a one-dimensional
model of an ice sheet. It is shown, using various types of observations, that
the techniques predict the evolution of the edges of the ice sheet and its height accurately and efficiently.
Jaap Schellekens, Emanuel Dutra, Alberto Martínez-de la Torre, Gianpaolo Balsamo, Albert van Dijk, Frederiek Sperna Weiland, Marie Minvielle, Jean-Christophe Calvet, Bertrand Decharme, Stephanie Eisner, Gabriel Fink, Martina Flörke, Stefanie Peßenteiner, Rens van Beek, Jan Polcher, Hylke Beck, René Orth, Ben Calton, Sophia Burke, Wouter Dorigo, and Graham P. Weedon
Earth Syst. Sci. Data, 9, 389–413, https://doi.org/10.5194/essd-9-389-2017, https://doi.org/10.5194/essd-9-389-2017, 2017
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The dataset combines the results of 10 global models that describe the global continental water cycle. The data can be used as input for water resources studies, flood frequency studies etc. at different scales from continental to medium-scale catchments. We compared the results with earth observation data and conclude that most uncertainties are found in snow-dominated regions and tropical rainforest and monsoon regions.
David Fairbairn, Alina Lavinia Barbu, Adrien Napoly, Clément Albergel, Jean-François Mahfouf, and Jean-Christophe Calvet
Hydrol. Earth Syst. Sci., 21, 2015–2033, https://doi.org/10.5194/hess-21-2015-2017, https://doi.org/10.5194/hess-21-2015-2017, 2017
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This study assesses the impact on river discharge simulations over France of assimilating ASCAT-derived surface soil moisture (SSM) and leaf area index (LAI) observations into the ISBA land surface model. Wintertime LAI has a notable impact on river discharge. SSM assimilation degrades river discharge simulations. This is caused by limitations in the simplified versions of the Kalman filter and ISBA model used in this study. Implementing an observation operator for ASCAT is needed.
Jean-Christophe Calvet, Noureddine Fritz, Christine Berne, Bruno Piguet, William Maurel, and Catherine Meurey
SOIL, 2, 615–629, https://doi.org/10.5194/soil-2-615-2016, https://doi.org/10.5194/soil-2-615-2016, 2016
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Soil thermal conductivity in wet conditions can be retrieved together with the soil quartz content using a reverse modelling technique based on sub-hourly soil temperature observations at three depths below the soil surface.
A pedotransfer function is proposed for quartz, for the considered region in France.
Gravels have a major impact on soil thermal conductivity, and omitting the soil organic matter information tends to enhance this impact.
Roland Séférian, Christine Delire, Bertrand Decharme, Aurore Voldoire, David Salas y Melia, Matthieu Chevallier, David Saint-Martin, Olivier Aumont, Jean-Christophe Calvet, Dominique Carrer, Hervé Douville, Laurent Franchistéguy, Emilie Joetzjer, and Séphane Sénési
Geosci. Model Dev., 9, 1423–1453, https://doi.org/10.5194/gmd-9-1423-2016, https://doi.org/10.5194/gmd-9-1423-2016, 2016
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This paper presents the first IPCC-class Earth system model developed at Centre National de Recherches Météorologiques (CNRM-ESM1). We detail how the various carbon reservoirs were initialized and analyze the behavior of the carbon cycle and its prominent physical drivers, comparing model results to the most up-to-date climate and carbon cycle dataset over the latest decades.
B. Bonan, M. J. Baines, N. K. Nichols, and D. Partridge
The Cryosphere, 10, 1–14, https://doi.org/10.5194/tc-10-1-2016, https://doi.org/10.5194/tc-10-1-2016, 2016
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This paper introduce a moving-point approach to model the flow of ice sheets. This particular moving-grid numerical approach is based on the conservation of local masses. This allows the ice sheet margins to be tracked explicitly. A finite-difference moving-point scheme is derived and applied in a simplified context (1-D). The conservation method is also suitable for 2-D scenarios. This paper is a first step towards applications of the conservation method to realistic 2-D cases.
D. Fairbairn, A. L. Barbu, J.-F. Mahfouf, J.-C. Calvet, and E. Gelati
Hydrol. Earth Syst. Sci., 19, 4811–4830, https://doi.org/10.5194/hess-19-4811-2015, https://doi.org/10.5194/hess-19-4811-2015, 2015
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The ensemble Kalman filter (EnKF) and simplified extended Kalman filter (SEKF) root-zone soil moisture analyses are compared when assimilating in situ surface observations. In the synthetic experiments, the EnKF performs best because it can stochastically capture the errors in the precipitation. The two methods perform similarly in the real experiments. During the summer period, both methods perform poorly as a result of nonlinearities in the land surface model.
S. Garrigues, A. Olioso, D. Carrer, B. Decharme, J.-C. Calvet, E. Martin, S. Moulin, and O. Marloie
Geosci. Model Dev., 8, 3033–3053, https://doi.org/10.5194/gmd-8-3033-2015, https://doi.org/10.5194/gmd-8-3033-2015, 2015
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This paper investigates the impacts of uncertainties in the climate, the vegetation dynamic, the soil properties and the cropland management on the simulation of evapotranspiration from the ISBA-A-gs land surface model over a 12-year Mediterranean crop succession. It mainly shows that errors in the soil parameters and the lack of irrigation in the simulation have the largest influence on evapotranspiration compared to the uncertainties in the climate and the vegetation dynamic.
S. Garrigues, A. Olioso, J. C. Calvet, E. Martin, S. Lafont, S. Moulin, A. Chanzy, O. Marloie, S. Buis, V. Desfonds, N. Bertrand, and D. Renard
Hydrol. Earth Syst. Sci., 19, 3109–3131, https://doi.org/10.5194/hess-19-3109-2015, https://doi.org/10.5194/hess-19-3109-2015, 2015
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Land surface model simulations of evapotranspiration are assessed over a 12-year Mediterranean crop succession. Evapotranspiration mainly results from soil evaporation when it is simulated over a Mediterranean crop succession. This leads to a high sensitivity to the soil parameters. Errors on soil hydraulic properties can lead to a large bias in cumulative evapotranspiration over a long period of time. Accounting for uncertainties in soil properties is essential for land surface modelling.
G. Balsamo, C. Albergel, A. Beljaars, S. Boussetta, E. Brun, H. Cloke, D. Dee, E. Dutra, J. Muñoz-Sabater, F. Pappenberger, P. de Rosnay, T. Stockdale, and F. Vitart
Hydrol. Earth Syst. Sci., 19, 389–407, https://doi.org/10.5194/hess-19-389-2015, https://doi.org/10.5194/hess-19-389-2015, 2015
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ERA-Interim/Land is a global land surface reanalysis covering the period 1979–2010. It describes the evolution of soil moisture, soil temperature and snowpack. ERA-Interim/Land includes a number of parameterization improvements in the land surface scheme with respect to the original ERA-Interim and a precipitation bias correction based on GPCP. A selection of verification results show the added value in representing the terrestrial water cycle and its main land surface storages and fluxes.
N. Canal, J.-C. Calvet, B. Decharme, D. Carrer, S. Lafont, and G. Pigeon
Hydrol. Earth Syst. Sci., 18, 4979–4999, https://doi.org/10.5194/hess-18-4979-2014, https://doi.org/10.5194/hess-18-4979-2014, 2014
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Regional French agricultural yield statistics are used to benchmark root water uptake representations in the ISBA-A-gs model. Key model parameters governing the inter-annual variability of the simulated biomass are retrieved. A complex multi-layer soil hydrology model does not outperform a simple bulk root-zone reservoir approach. This could be explained by missing processes/information in the model such as hydraulic redistribution and detailed soil properties.
E. Joetzjer, C. Delire, H. Douville, P. Ciais, B. Decharme, R. Fisher, B. Christoffersen, J. C. Calvet, A. C. L. da Costa, L. V. Ferreira, and P. Meir
Geosci. Model Dev., 7, 2933–2950, https://doi.org/10.5194/gmd-7-2933-2014, https://doi.org/10.5194/gmd-7-2933-2014, 2014
M. Balzarolo, S. Boussetta, G. Balsamo, A. Beljaars, F. Maignan, J.-C. Calvet, S. Lafont, A. Barbu, B. Poulter, F. Chevallier, C. Szczypta, and D. Papale
Biogeosciences, 11, 2661–2678, https://doi.org/10.5194/bg-11-2661-2014, https://doi.org/10.5194/bg-11-2661-2014, 2014
C. Szczypta, J.-C. Calvet, F. Maignan, W. Dorigo, F. Baret, and P. Ciais
Geosci. Model Dev., 7, 931–946, https://doi.org/10.5194/gmd-7-931-2014, https://doi.org/10.5194/gmd-7-931-2014, 2014
M. Parrens, J.-F. Mahfouf, A. L. Barbu, and J.-C. Calvet
Hydrol. Earth Syst. Sci., 18, 673–689, https://doi.org/10.5194/hess-18-673-2014, https://doi.org/10.5194/hess-18-673-2014, 2014
A. L. Barbu, J.-C. Calvet, J.-F. Mahfouf, and S. Lafont
Hydrol. Earth Syst. Sci., 18, 173–192, https://doi.org/10.5194/hess-18-173-2014, https://doi.org/10.5194/hess-18-173-2014, 2014
V. Masson, P. Le Moigne, E. Martin, S. Faroux, A. Alias, R. Alkama, S. Belamari, A. Barbu, A. Boone, F. Bouyssel, P. Brousseau, E. Brun, J.-C. Calvet, D. Carrer, B. Decharme, C. Delire, S. Donier, K. Essaouini, A.-L. Gibelin, H. Giordani, F. Habets, M. Jidane, G. Kerdraon, E. Kourzeneva, M. Lafaysse, S. Lafont, C. Lebeaupin Brossier, A. Lemonsu, J.-F. Mahfouf, P. Marguinaud, M. Mokhtari, S. Morin, G. Pigeon, R. Salgado, Y. Seity, F. Taillefer, G. Tanguy, P. Tulet, B. Vincendon, V. Vionnet, and A. Voldoire
Geosci. Model Dev., 6, 929–960, https://doi.org/10.5194/gmd-6-929-2013, https://doi.org/10.5194/gmd-6-929-2013, 2013
R. Amri, M. Zribi, Z. Lili-Chabaane, C. Szczypta, J. C. Calvet, and G. Boulet
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-8117-2013, https://doi.org/10.5194/hessd-10-8117-2013, 2013
Revised manuscript not accepted
Related subject area
Biogeochemistry: Modelling, Terrestrial
A 2001–2022 global gross primary productivity dataset using an ensemble model based on the random forest method
Future projections of Siberian wildfire and aerosol emissions
Mechanisms of soil organic carbon and nitrogen stabilization in mineral-associated organic matter – insights from modeling in phase space
Optimizing the terrestrial ecosystem gross primary productivity using carbonyl sulfide (COS) within a two-leaf modeling framework
Modeling integrated soil fertility management for maize production in Kenya using a Bayesian calibration of the DayCent model
When and why microbial-explicit soil organic carbon models can be unstable
The impacts of modelling prescribed vs. dynamic land cover in a high-CO2 future scenario – greening of the Arctic and Amazonian dieback
Climate-based prediction of carbon fluxes from deadwood in Australia
Integration of tree hydraulic processes and functional impairment to capture the drought resilience of a semiarid pine forest
The effect of temperature on photosystem II efficiency across plant functional types and climate
Modeling microbial carbon fluxes and stocks in global soils from 1901 to 2016
Elevated atmospheric CO2 concentration and vegetation structural changes contributed to gross primary productivity increase more than climate and forest cover changes in subtropical forests of China
Non-steady-state stomatal conductance modeling and its implications: from leaf to ecosystem
Modelled forest ecosystem carbon–nitrogen dynamics with integrated mycorrhizal processes under elevated CO2
A chemical kinetics theory for interpreting the non-monotonic temperature dependence of enzymatic reactions
Representation of the Terrestrial Carbon Cycle in CMIP6
Using Free Air CO2 Enrichment data to constrain land surface model projections of the terrestrial carbon cycle
Multiscale assessment of North American terrestrial carbon balance
Simulating net ecosystem exchange under seasonal snow cover at an Arctic tundra site
X-BASE: the first terrestrial carbon and water flux products from an extended data-driven scaling framework, FLUXCOM-X
Spatial biases reduce the ability of Earth system models to simulate soil heterotrophic respiration fluxes
Tropical dry forest response to nutrient fertilization: a model validation and sensitivity analysis
Connecting competitor, stress-tolerator and ruderal (CSR) theory and Lund Potsdam Jena managed Land 5 (LPJmL 5) to assess the role of environmental conditions, management and functional diversity for grassland ecosystem functions
A global fuel characteristic model and dataset for wildfire prediction
Can models adequately reflect how long-term nitrogen enrichment alters the forest soil carbon cycle?
Temporal variability of observed and simulated gross primary productivity, modulated by vegetation state and hydrometeorological drivers
Does dynamically modelled leaf area improve predictions of land surface water and carbon fluxes? – Insights into dynamic vegetation modules
Empirical upscaling of OzFlux eddy covariance for high-resolution monitoring of terrestrial carbon uptake in Australia
A modeling approach to investigate drivers, variability and uncertainties in O2 fluxes and O2 : CO2 exchange ratios in a temperate forest
Modeling coupled nitrification–denitrification in soil with an organic hotspot
A new method for estimating carbon dioxide emissions from drained peatland forest soils for the greenhouse gas inventory of Finland
Enabling a process-oriented hydro-biogeochemical model to simulate soil erosion and nutrient losses
Potassium limitation of forest productivity – Part 1: A mechanistic model simulating the effects of potassium availability on canopy carbon and water fluxes in tropical eucalypt stands
Potassium limitation of forest productivity – Part 2: CASTANEA-MAESPA-K shows a reduction in photosynthesis rather than a stoichiometric limitation of tissue formation
Global evaluation of terrestrial biogeochemistry in the Energy Exascale Earth System Model (E3SM) and the role of the phosphorus cycle in the historical terrestrial carbon balance
Assessing carbon storage capacity and saturation across six central US grasslands using data–model integration
Optimizing the carbonic anhydrase temperature response and stomatal conductance of carbonyl sulfide leaf uptake in the Simple Biosphere model (SiB4)
Exploring environmental and physiological drivers of the annual carbon budget of biocrusts from various climatic zones with a mechanistic data-driven model
Improved process representation of leaf phenology significantly shifts climate sensitivity of ecosystem carbon balance
Mapping of ESA's Climate Change Initiative land cover data to plant functional types for use in the CLASSIC land model
Exploring the impacts of unprecedented climate extremes on forest ecosystems: hypotheses to guide modeling and experimental studies
Effect of droughts and climate change on future soil weathering rates in Sweden
Information content in time series of litter decomposition studies and the transit time of litter in arid lands
Long-term changes of nitrogen leaching and the contributions of terrestrial nutrient sources to lake eutrophication dynamics on the Yangtze Plain of China
Towards an ensemble-based evaluation of land surface models in light of uncertain forcings and observations
Observational benchmarks inform representation of soil organic carbon dynamics in land surface models
Effect of land-use legacy on the future carbon sink for the conterminous US
Peatlands and their carbon dynamics in northern high latitudes from 1990 to 2300: a process-based biogeochemistry model analysis
Improved representation of phosphorus exchange on soil mineral surfaces reduces estimates of phosphorus limitation in temperate forest ecosystems
A coupled ground heat flux–surface energy balance model of evaporation using thermal remote sensing observations
Xin Chen, Tiexi Chen, Xiaodong Li, Yuanfang Chai, Shengjie Zhou, Renjie Guo, and Jie Dai
Biogeosciences, 21, 4285–4300, https://doi.org/10.5194/bg-21-4285-2024, https://doi.org/10.5194/bg-21-4285-2024, 2024
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We provide an ensemble-model-based GPP dataset (ERF_GPP) that explains 85.1 % of the monthly variation in GPP across 170 sites, which is higher than other GPP estimate models. In addition, ERF_GPP improves the phenomenon of “high-value underestimation and low-value overestimation” in GPP estimation to some extent. Overall, ERF_GPP provides a more reliable estimate of global GPP and will facilitate further development of carbon cycle research.
Reza Kusuma Nurrohman, Tomomichi Kato, Hideki Ninomiya, Lea Végh, Nicolas Delbart, Tatsuya Miyauchi, Hisashi Sato, Tomohiro Shiraishi, and Ryuichi Hirata
Biogeosciences, 21, 4195–4227, https://doi.org/10.5194/bg-21-4195-2024, https://doi.org/10.5194/bg-21-4195-2024, 2024
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SPITFIRE (SPread and InTensity of FIRE) was integrated into a spatially explicit individual-based dynamic global vegetation model to improve the accuracy of depicting Siberian forest fire frequency, intensity, and extent. Fires showed increased greenhouse gas and aerosol emissions in 2006–2100 for Representative Concentration Pathways. This study contributes to understanding fire dynamics, land ecosystem–climate interactions, and global material cycles under the threat of escalating fires.
Stefano Manzoni and M. Francesca Cotrufo
Biogeosciences, 21, 4077–4098, https://doi.org/10.5194/bg-21-4077-2024, https://doi.org/10.5194/bg-21-4077-2024, 2024
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Organic carbon and nitrogen are stabilized in soils via microbial assimilation and stabilization of necromass (in vivo pathway) or via adsorption of the products of extracellular decomposition (ex vivo pathway). Here we use a diagnostic model to quantify which stabilization pathway is prevalent using data on residue-derived carbon and nitrogen incorporation in mineral-associated organic matter. We find that the in vivo pathway is dominant in fine-textured soils with low organic matter content.
Huajie Zhu, Xiuli Xing, Mousong Wu, Weimin Ju, and Fei Jiang
Biogeosciences, 21, 3735–3760, https://doi.org/10.5194/bg-21-3735-2024, https://doi.org/10.5194/bg-21-3735-2024, 2024
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Ecosystem carbonyl sulfide (COS) fluxes were employed to optimize GPP estimation across ecosystems with the Biosphere-atmosphere Exchange Process Simulator (BEPS), which was developed for simulating the canopy COS uptake under its state-of-the-art two-leaf modeling framework. Our results showcased the efficacy of COS in improving model prediction and reducing prediction uncertainty of GPP and enhanced insights into the sensitivity, identifiability, and interactions of parameters related to COS.
Moritz Laub, Magdalena Necpalova, Marijn Van de Broek, Marc Corbeels, Samuel Mathu Ndungu, Monicah Wanjiku Mucheru-Muna, Daniel Mugendi, Rebecca Yegon, Wycliffe Waswa, Bernard Vanlauwe, and Johan Six
Biogeosciences, 21, 3691–3716, https://doi.org/10.5194/bg-21-3691-2024, https://doi.org/10.5194/bg-21-3691-2024, 2024
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We used the DayCent model to assess the potential impact of integrated soil fertility management (ISFM) on maize production, soil fertility, and greenhouse gas emission in Kenya. After adjustments, DayCent represented measured mean yields and soil carbon stock changes well and N2O emissions acceptably. Our results showed that soil fertility losses could be reduced but not completely eliminated with ISFM and that, while N2O emissions increased with ISFM, emissions per kilogram yield decreased.
Erik Schwarz, Samia Ghersheen, Salim Belyazid, and Stefano Manzoni
Biogeosciences, 21, 3441–3461, https://doi.org/10.5194/bg-21-3441-2024, https://doi.org/10.5194/bg-21-3441-2024, 2024
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The occurrence of unstable equilibrium points (EPs) could impede the applicability of microbial-explicit soil organic carbon models. For archetypal model versions we identify when instability can occur and describe mathematical conditions to avoid such unstable EPs. We discuss implications for further model development, highlighting the important role of considering basic ecological principles to ensure biologically meaningful models.
Sian Kou-Giesbrecht, Vivek K. Arora, Christian Seiler, and Libo Wang
Biogeosciences, 21, 3339–3371, https://doi.org/10.5194/bg-21-3339-2024, https://doi.org/10.5194/bg-21-3339-2024, 2024
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Terrestrial biosphere models can either prescribe the geographical distribution of biomes or simulate them dynamically, capturing climate-change-driven biome shifts. We isolate and examine the differences between these different land cover implementations. We find that the simulated terrestrial carbon sink at the end of the 21st century is twice as large in simulations with dynamic land cover than in simulations with prescribed land cover due to important range shifts in the Arctic and Amazon.
Elizabeth S. Duan, Luciana Chavez Rodriguez, Nicole Hemming-Schroeder, Baptiste Wijas, Habacuc Flores-Moreno, Alexander W. Cheesman, Lucas A. Cernusak, Michael J. Liddell, Paul Eggleton, Amy E. Zanne, and Steven D. Allison
Biogeosciences, 21, 3321–3338, https://doi.org/10.5194/bg-21-3321-2024, https://doi.org/10.5194/bg-21-3321-2024, 2024
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Understanding the link between climate and carbon fluxes is crucial for predicting how climate change will impact carbon sinks. We estimated carbon dioxide (CO2) fluxes from deadwood in tropical Australia using wood moisture content and temperature. Our model predicted that the majority of deadwood carbon is released as CO2, except when termite activity is detected. Future models should also incorporate wood traits, like species and chemical composition, to better predict fluxes.
Daniel Nadal-Sala, Rüdiger Grote, David Kraus, Uri Hochberg, Tamir Klein, Yael Wagner, Fedor Tatarinov, Dan Yakir, and Nadine K. Ruehr
Biogeosciences, 21, 2973–2994, https://doi.org/10.5194/bg-21-2973-2024, https://doi.org/10.5194/bg-21-2973-2024, 2024
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A hydraulic model approach is presented that can be added to any physiologically based ecosystem model. Simulated plant water potential triggers stomatal closure, photosynthesis decline, root–soil resistance increases, and sapwood and foliage senescence. The model has been evaluated at an extremely dry site stocked with Aleppo pine and was able to represent gas exchange, soil water content, and plant water potential. The model also responded realistically regarding leaf senescence.
Patrick Neri, Lianhong Gu, and Yang Song
Biogeosciences, 21, 2731–2758, https://doi.org/10.5194/bg-21-2731-2024, https://doi.org/10.5194/bg-21-2731-2024, 2024
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A first-of-its-kind global-scale model of temperature resilience and tolerance of photosystem II maximum quantum yield informs how plants maintain their efficiency of converting light energy to chemical energy for photosynthesis under temperature changes. Our finding explores this variation across plant functional types and habitat climatology, highlighting diverse temperature response strategies and a method to improve global-scale photosynthesis modeling under climate change.
Liyuan He, Jorge L. Mazza Rodrigues, Melanie A. Mayes, Chun-Ta Lai, David A. Lipson, and Xiaofeng Xu
Biogeosciences, 21, 2313–2333, https://doi.org/10.5194/bg-21-2313-2024, https://doi.org/10.5194/bg-21-2313-2024, 2024
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Soil microbes are the driving engine for biogeochemical cycles of carbon and nutrients. This study applies a microbial-explicit model to quantify bacteria and fungal biomass carbon in soils from 1901 to 2016. Results showed substantial increases in bacterial and fungal biomass carbon over the past century, jointly influenced by vegetation growth and soil temperature and moisture. This pioneering century-long estimation offers crucial insights into soil microbial roles in global carbon cycling.
Tao Chen, Félicien Meunier, Marc Peaucelle, Guoping Tang, Ye Yuan, and Hans Verbeeck
Biogeosciences, 21, 2253–2272, https://doi.org/10.5194/bg-21-2253-2024, https://doi.org/10.5194/bg-21-2253-2024, 2024
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Chinese subtropical forest ecosystems are an extremely important component of global forest ecosystems and hence crucial for the global carbon cycle and regional climate change. However, there is still great uncertainty in the relationship between subtropical forest carbon sequestration and its drivers. We provide first quantitative estimates of the individual and interactive effects of different drivers on the gross primary productivity changes of various subtropical forest types in China.
Ke Liu, Yujie Wang, Troy S. Magney, and Christian Frankenberg
Biogeosciences, 21, 1501–1516, https://doi.org/10.5194/bg-21-1501-2024, https://doi.org/10.5194/bg-21-1501-2024, 2024
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Stomata are pores on leaves that regulate gas exchange between plants and the atmosphere. Existing land models unrealistically assume stomata can jump between steady states when the environment changes. We implemented dynamic modeling to predict gradual stomatal responses at different scales. Results suggested that considering this effect on plant behavior patterns in diurnal cycles was important. Our framework also simplified simulations and can contribute to further efficiency improvements.
Melanie A. Thurner, Silvia Caldararu, Jan Engel, Anja Rammig, and Sönke Zaehle
Biogeosciences, 21, 1391–1410, https://doi.org/10.5194/bg-21-1391-2024, https://doi.org/10.5194/bg-21-1391-2024, 2024
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Due to their crucial role in terrestrial ecosystems, we implemented mycorrhizal fungi into the QUINCY terrestrial biosphere model. Fungi interact with mineral and organic soil to support plant N uptake and, thus, plant growth. Our results suggest that the effect of mycorrhizal interactions on simulated ecosystem dynamics is minor under constant environmental conditions but necessary to reproduce and understand observed patterns under changing conditions, such as rising atmospheric CO2.
Jinyun Tang and William J. Riley
Biogeosciences, 21, 1061–1070, https://doi.org/10.5194/bg-21-1061-2024, https://doi.org/10.5194/bg-21-1061-2024, 2024
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A chemical kinetics theory is proposed to explain the non-monotonic relationship between temperature and biochemical rates. It incorporates the observed thermally reversible enzyme denaturation that is ensured by the ceaseless thermal motion of molecules and ions in an enzyme solution and three well-established theories: (1) law of mass action, (2) diffusion-limited chemical reaction theory, and (3) transition state theory.
Bettina K. Gier, Manuel Schlund, Pierre Friedlingstein, Chris D. Jones, Colin Jones, Sönke Zaehle, and Veronika Eyring
EGUsphere, https://doi.org/10.5194/egusphere-2024-277, https://doi.org/10.5194/egusphere-2024-277, 2024
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This study investigates present day carbon cycle variables in CMIP5 and CMIP6 simulations. A significant improvement in the simulation of photosynthesis in models with nitrogen cycle is found, as well as only small differences between emission and concentration based simulations. Thus, we recommend the use of emission driven simulations in CMIP7 as default setup, and to view the nitrogen cycle as a necessary part of all future carbon cycle models.
Nina Raoult, Louis-Axel Edouard-Rambaut, Nicolas Vuichard, Vladislav Bastrikov, Anne Sofie Lansø, Bertrand Guenet, and Philippe Peylin
Biogeosciences, 21, 1017–1036, https://doi.org/10.5194/bg-21-1017-2024, https://doi.org/10.5194/bg-21-1017-2024, 2024
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Observations are used to reduce uncertainty in land surface models (LSMs) by optimising poorly constraining parameters. However, optimising against current conditions does not necessarily ensure that the parameters treated as invariant will be robust in a changing climate. Manipulation experiments offer us a unique chance to optimise our models under different (here atmospheric CO2) conditions. By using these data in optimisations, we gain confidence in the future projections of LSMs.
Kelsey T. Foster, Wu Sun, Yoichi P. Shiga, Jiafu Mao, and Anna M. Michalak
Biogeosciences, 21, 869–891, https://doi.org/10.5194/bg-21-869-2024, https://doi.org/10.5194/bg-21-869-2024, 2024
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Assessing agreement between bottom-up and top-down methods across spatial scales can provide insights into the relationship between ensemble spread (difference across models) and model accuracy (difference between model estimates and reality). We find that ensemble spread is unlikely to be a good indicator of actual uncertainty in the North American carbon balance. However, models that are consistent with atmospheric constraints show stronger agreement between top-down and bottom-up estimates.
Victoria R. Dutch, Nick Rutter, Leanne Wake, Oliver Sonnentag, Gabriel Hould Gosselin, Melody Sandells, Chris Derksen, Branden Walker, Gesa Meyer, Richard Essery, Richard Kelly, Phillip Marsh, Julia Boike, and Matteo Detto
Biogeosciences, 21, 825–841, https://doi.org/10.5194/bg-21-825-2024, https://doi.org/10.5194/bg-21-825-2024, 2024
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We undertake a sensitivity study of three different parameters on the simulation of net ecosystem exchange (NEE) during the snow-covered non-growing season at an Arctic tundra site. Simulations are compared to eddy covariance measurements, with near-zero NEE simulated despite observed CO2 release. We then consider how to parameterise the model better in Arctic tundra environments on both sub-seasonal timescales and cumulatively throughout the snow-covered non-growing season.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billdesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Gharun Mana, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2024-165, https://doi.org/10.5194/egusphere-2024-165, 2024
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The movement of water, carbon, and energy from the earth surface to the atmosphere, or flux, is an important process to understand that impacts all of our lives. Here we outline a method to estimate global water and CO2 fluxes based on direct measurements from site around the world called FLUXCOM-X. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Bertrand Guenet, Jérémie Orliac, Lauric Cécillon, Olivier Torres, Laura Sereni, Philip A. Martin, Pierre Barré, and Laurent Bopp
Biogeosciences, 21, 657–669, https://doi.org/10.5194/bg-21-657-2024, https://doi.org/10.5194/bg-21-657-2024, 2024
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Heterotrophic respiration fluxes are a major flux between surfaces and the atmosphere, but Earth system models do not yet represent them correctly. Here we benchmarked Earth system models against observation-based products, and we identified the important mechanisms that need to be improved in the next-generation Earth system models.
Shuyue Li, Bonnie Waring, Jennifer Powers, and David Medvigy
Biogeosciences, 21, 455–471, https://doi.org/10.5194/bg-21-455-2024, https://doi.org/10.5194/bg-21-455-2024, 2024
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We used an ecosystem model to simulate primary production of a tropical forest subjected to 3 years of nutrient fertilization. Simulations parameterized such that relative allocation to fine roots increased with increasing soil phosphorus had leaf, wood, and fine root production consistent with observations. However, these simulations seemed to over-allocate to fine roots on multidecadal timescales, affecting aboveground biomass. Additional observations across timescales would benefit models.
Stephen Björn Wirth, Arne Poyda, Friedhelm Taube, Britta Tietjen, Christoph Müller, Kirsten Thonicke, Anja Linstädter, Kai Behn, Sibyll Schaphoff, Werner von Bloh, and Susanne Rolinski
Biogeosciences, 21, 381–410, https://doi.org/10.5194/bg-21-381-2024, https://doi.org/10.5194/bg-21-381-2024, 2024
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In dynamic global vegetation models (DGVMs), the role of functional diversity in forage supply and soil organic carbon storage of grasslands is not explicitly taken into account. We introduced functional diversity into the Lund Potsdam Jena managed Land (LPJmL) DGVM using CSR theory. The new model reproduced well-known trade-offs between plant traits and can be used to quantify the role of functional diversity in climate change mitigation using different functional diversity scenarios.
Joe R. McNorton and Francesca Di Giuseppe
Biogeosciences, 21, 279–300, https://doi.org/10.5194/bg-21-279-2024, https://doi.org/10.5194/bg-21-279-2024, 2024
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Wildfires have wide-ranging consequences for local communities, air quality and ecosystems. Vegetation amount and moisture state are key components to forecast wildfires. We developed a combined model and satellite framework to characterise vegetation, including the type of fuel, whether it is alive or dead, and its moisture content. The daily data is at high resolution globally (~9 km). Our characteristics correlate with active fire data and can inform fire danger and spread modelling efforts.
Brooke A. Eastman, William R. Wieder, Melannie D. Hartman, Edward R. Brzostek, and William T. Peterjohn
Biogeosciences, 21, 201–221, https://doi.org/10.5194/bg-21-201-2024, https://doi.org/10.5194/bg-21-201-2024, 2024
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We compared soil model performance to data from a long-term nitrogen addition experiment in a forested ecosystem. We found that in order for soil carbon models to accurately predict future forest carbon sequestration, two key processes must respond dynamically to nitrogen availability: (1) plant allocation of carbon to wood versus roots and (2) rates of soil organic matter decomposition. Long-term experiments can help improve our predictions of the land carbon sink and its climate impact.
Jan De Pue, Sebastian Wieneke, Ana Bastos, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Maral Maleki, Fabienne Maignan, Françoise Gellens-Meulenberghs, Ivan Janssens, and Manuela Balzarolo
Biogeosciences, 20, 4795–4818, https://doi.org/10.5194/bg-20-4795-2023, https://doi.org/10.5194/bg-20-4795-2023, 2023
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The gross primary production (GPP) of the terrestrial biosphere is a key source of variability in the global carbon cycle. To estimate this flux, models can rely on remote sensing data (RS-driven), meteorological data (meteo-driven) or a combination of both (hybrid). An intercomparison of 11 models demonstrated that RS-driven models lack the sensitivity to short-term anomalies. Conversely, the simulation of soil moisture dynamics and stress response remains a challenge in meteo-driven models.
Sven Armin Westermann, Anke Hildebrandt, Souhail Bousetta, and Stephan Thober
EGUsphere, https://doi.org/10.5194/egusphere-2023-2101, https://doi.org/10.5194/egusphere-2023-2101, 2023
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Plants at the land surface mediates between soil and atmosphere regarding water and carbon transport. Since plant growth is a dynamic process, models need to care for this dynamics. Here, two models which predict water and carbon fluxes by considering plant temporal evolution were tested against observational data. Currently, dynamizing plants in these models did not enhance their representativeness which is caused by a mismatch between implemented physical relations and observable connections.
Chad A. Burton, Luigi J. Renzullo, Sami W. Rifai, and Albert I. J. M. Van Dijk
Biogeosciences, 20, 4109–4134, https://doi.org/10.5194/bg-20-4109-2023, https://doi.org/10.5194/bg-20-4109-2023, 2023
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Australia's land-based ecosystems play a critical role in controlling the variability in the global land carbon sink. However, uncertainties in the methods used for quantifying carbon fluxes limit our understanding. We develop high-resolution estimates of Australia's land carbon fluxes using machine learning methods and find that Australia is, on average, a stronger carbon sink than previously thought and that the seasonal dynamics of the fluxes differ from those described by other methods.
Yuan Yan, Anne Klosterhalfen, Fernando Moyano, Matthias Cuntz, Andrew C. Manning, and Alexander Knohl
Biogeosciences, 20, 4087–4107, https://doi.org/10.5194/bg-20-4087-2023, https://doi.org/10.5194/bg-20-4087-2023, 2023
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A better understanding of O2 fluxes, their exchange ratios with CO2 and their interrelations with environmental conditions would provide further insights into biogeochemical ecosystem processes. We, therefore, used the multilayer canopy model CANVEG to simulate and analyze the flux exchange for our forest study site for 2012–2016. Based on these simulations, we further successfully tested the application of various micrometeorological methods and the prospects of real O2 flux measurements.
Jie Zhang, Elisabeth Larsen Kolstad, Wenxin Zhang, Iris Vogeler, and Søren O. Petersen
Biogeosciences, 20, 3895–3917, https://doi.org/10.5194/bg-20-3895-2023, https://doi.org/10.5194/bg-20-3895-2023, 2023
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Manure application to agricultural land often results in large and variable N2O emissions. We propose a model with a parsimonious structure to investigate N transformations around such N2O hotspots. The model allows for new detailed insights into the interactions between transport and microbial activities regarding N2O emissions in heterogeneous soil environments. It highlights the importance of solute diffusion to N2O emissions from such hotspots which are often ignored by process-based models.
Jukka Alm, Antti Wall, Jukka-Pekka Myllykangas, Paavo Ojanen, Juha Heikkinen, Helena M. Henttonen, Raija Laiho, Kari Minkkinen, Tarja Tuomainen, and Juha Mikola
Biogeosciences, 20, 3827–3855, https://doi.org/10.5194/bg-20-3827-2023, https://doi.org/10.5194/bg-20-3827-2023, 2023
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In Finland peatlands cover one-third of land area. For half of those, with 4.3 Mha being drained for forestry, Finland reports sinks and sources of greenhouse gases in forest lands on organic soils following its UNFCCC commitment. We describe a new method for compiling soil CO2 balance that follows changes in tree volume, tree harvests and temperature. An increasing trend of emissions from 1.4 to 7.9 Mt CO2 was calculated for drained peatland forest soils in Finland for 1990–2021.
Siqi Li, Bo Zhu, Xunhua Zheng, Pengcheng Hu, Shenghui Han, Jihui Fan, Tao Wang, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, Wei Zhang, and Yong Li
Biogeosciences, 20, 3555–3572, https://doi.org/10.5194/bg-20-3555-2023, https://doi.org/10.5194/bg-20-3555-2023, 2023
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Physical soil erosion and particulate carbon, nitrogen and phosphorus loss modules were incorporated into the process-oriented hydro-biogeochemical model CNMM-DNDC to realize the accurate simulation of water-induced erosion and subsequent particulate nutrient losses at high spatiotemporal resolution.
Ivan Cornut, Nicolas Delpierre, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, Otavio Campoe, Jose Luiz Stape, Vitoria Fernanda Santos, and Guerric le Maire
Biogeosciences, 20, 3093–3117, https://doi.org/10.5194/bg-20-3093-2023, https://doi.org/10.5194/bg-20-3093-2023, 2023
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Potassium is an essential element for living organisms. Trees are dependent upon this element for certain functions that allow them to build their trunks using carbon dioxide. Using data from experiments in eucalypt plantations in Brazil and a simplified computer model of the plantations, we were able to investigate the effect that a lack of potassium can have on the production of wood. Understanding nutrient cycles is useful to understand the response of forests to environmental change.
Ivan Cornut, Guerric le Maire, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, and Nicolas Delpierre
Biogeosciences, 20, 3119–3135, https://doi.org/10.5194/bg-20-3119-2023, https://doi.org/10.5194/bg-20-3119-2023, 2023
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After simulating the effects of low levels of potassium on the canopy of trees and the uptake of carbon dioxide from the atmosphere by leaves in Part 1, here we tried to simulate the way the trees use the carbon they have acquired and the interaction with the potassium cycle in the tree. We show that the effect of low potassium on the efficiency of the trees in acquiring carbon is enough to explain why they produce less wood when they are in soils with low levels of potassium.
Xiaojuan Yang, Peter Thornton, Daniel Ricciuto, Yilong Wang, and Forrest Hoffman
Biogeosciences, 20, 2813–2836, https://doi.org/10.5194/bg-20-2813-2023, https://doi.org/10.5194/bg-20-2813-2023, 2023
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We evaluated the performance of a land surface model (ELMv1-CNP) that includes both nitrogen (N) and phosphorus (P) limitation on carbon cycle processes. We show that ELMv1-CNP produces realistic estimates of present-day carbon pools and fluxes. We show that global C sources and sinks are significantly affected by P limitation. Our study suggests that introduction of P limitation in land surface models is likely to have substantial consequences for projections of future carbon uptake.
Kevin R. Wilcox, Scott L. Collins, Alan K. Knapp, William Pockman, Zheng Shi, Melinda D. Smith, and Yiqi Luo
Biogeosciences, 20, 2707–2725, https://doi.org/10.5194/bg-20-2707-2023, https://doi.org/10.5194/bg-20-2707-2023, 2023
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The capacity for carbon storage (C capacity) is an attribute that determines how ecosystems store carbon in the future. Here, we employ novel data–model integration techniques to identify the carbon capacity of six grassland sites spanning the US Great Plains. Hot and dry sites had low C capacity due to less plant growth and high turnover of soil C, so they may be a C source in the future. Alternately, cooler and wetter ecosystems had high C capacity, so these systems may be a future C sink.
Ara Cho, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Richard Wehr, and Maarten C. Krol
Biogeosciences, 20, 2573–2594, https://doi.org/10.5194/bg-20-2573-2023, https://doi.org/10.5194/bg-20-2573-2023, 2023
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Carbonyl sulfide (COS) is a useful constraint for estimating photosynthesis. To simulate COS leaf flux better in the SiB4 model, we propose a novel temperature function for enzyme carbonic anhydrase (CA) activity and optimize conductances using observations. The optimal activity of CA occurs below 40 °C, and Ball–Woodrow–Berry parameters are slightly changed. These reduce/increase uptakes in the tropics/higher latitudes and contribute to resolving discrepancies in the COS global budget.
Yunyao Ma, Bettina Weber, Alexandra Kratz, José Raggio, Claudia Colesie, Maik Veste, Maaike Y. Bader, and Philipp Porada
Biogeosciences, 20, 2553–2572, https://doi.org/10.5194/bg-20-2553-2023, https://doi.org/10.5194/bg-20-2553-2023, 2023
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We found that the modelled annual carbon balance of biocrusts is strongly affected by both the environment (mostly air temperature and CO2 concentration) and physiology, such as temperature response of respiration. However, the relative impacts of these drivers vary across regions with different climates. Uncertainty in driving factors may lead to unrealistic carbon balance estimates, particularly in temperate climates, and may be explained by seasonal variation of physiology due to acclimation.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and T. Luke Smallman
Biogeosciences, 20, 2455–2484, https://doi.org/10.5194/bg-20-2455-2023, https://doi.org/10.5194/bg-20-2455-2023, 2023
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This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Libo Wang, Vivek K. Arora, Paul Bartlett, Ed Chan, and Salvatore R. Curasi
Biogeosciences, 20, 2265–2282, https://doi.org/10.5194/bg-20-2265-2023, https://doi.org/10.5194/bg-20-2265-2023, 2023
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Plant functional types (PFTs) are groups of plant species used to represent vegetation distribution in land surface models. There are large uncertainties associated with existing methods for mapping land cover datasets to PFTs. This study demonstrates how fine-resolution tree cover fraction and land cover datasets can be used to inform the PFT mapping process and reduce the uncertainties. The proposed largely objective method makes it easier to implement new land cover products in models.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
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Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Veronika Kronnäs, Klas Lucander, Giuliana Zanchi, Nadja Stadlinger, Salim Belyazid, and Cecilia Akselsson
Biogeosciences, 20, 1879–1899, https://doi.org/10.5194/bg-20-1879-2023, https://doi.org/10.5194/bg-20-1879-2023, 2023
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In a future climate, extreme droughts might become more common. Climate change and droughts can have negative effects on soil weathering and plant health.
In this study, climate change effects on weathering were studied on sites in Sweden using the model ForSAFE, a climate change scenario and an extreme drought scenario. The modelling shows that weathering is higher during summer and increases with global warming but that weathering during drought summers can become as low as winter weathering.
Agustín Sarquis and Carlos A. Sierra
Biogeosciences, 20, 1759–1771, https://doi.org/10.5194/bg-20-1759-2023, https://doi.org/10.5194/bg-20-1759-2023, 2023
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Although plant litter is chemically and physically heterogenous and undergoes multiple transformations, models that represent litter dynamics often ignore this complexity. We used a multi-model inference framework to include information content in litter decomposition datasets and studied the time it takes for litter to decompose as measured by the transit time. In arid lands, the median transit time of litter is about 3 years and has a negative correlation with mean annual temperature.
Qi Guan, Jing Tang, Lian Feng, Stefan Olin, and Guy Schurgers
Biogeosciences, 20, 1635–1648, https://doi.org/10.5194/bg-20-1635-2023, https://doi.org/10.5194/bg-20-1635-2023, 2023
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Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
Vivek K. Arora, Christian Seiler, Libo Wang, and Sian Kou-Giesbrecht
Biogeosciences, 20, 1313–1355, https://doi.org/10.5194/bg-20-1313-2023, https://doi.org/10.5194/bg-20-1313-2023, 2023
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The behaviour of natural systems is now very often represented through mathematical models. These models represent our understanding of how nature works. Of course, nature does not care about our understanding. Since our understanding is not perfect, evaluating models is challenging, and there are uncertainties. This paper illustrates this uncertainty for land models and argues that evaluating models in light of the uncertainty in various components provides useful information.
Kamal Nyaupane, Umakant Mishra, Feng Tao, Kyongmin Yeo, William J. Riley, Forrest M. Hoffman, and Sagar Gautam
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-50, https://doi.org/10.5194/bg-2023-50, 2023
Revised manuscript accepted for BG
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Representing soil organic carbon (SOC) dynamics in Earth system models (ESMs) is a key source of uncertainty in predicting carbon climate feedbacks. We used machine learning to develop and compare predictive relationships in observations and ESMs. We found different relationships between environmental factors and SOC stocks in observations and ESMs. SOC predictions in ESMs may be improved by representing the functional relationships of environmental controllers consistent with observations.
Benjamin S. Felzer
Biogeosciences, 20, 573–587, https://doi.org/10.5194/bg-20-573-2023, https://doi.org/10.5194/bg-20-573-2023, 2023
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The future of the terrestrial carbon sink depends upon the legacy of past land use, which determines the stand age of the forest and nutrient levels in the soil, both of which affect vegetation growth. This study uses a modeling approach to determine the effects of land-use legacy in the conterminous US from 1750 to 2099. Not accounting for land legacy results in a low carbon sink and high biomass, while water variables are not as highly affected.
Bailu Zhao and Qianlai Zhuang
Biogeosciences, 20, 251–270, https://doi.org/10.5194/bg-20-251-2023, https://doi.org/10.5194/bg-20-251-2023, 2023
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In this study, we use a process-based model to simulate the northern peatland's C dynamics in response to future climate change during 1990–2300. Northern peatlands are projected to be a C source under all climate scenarios except for the mildest one before 2100 and C sources under all scenarios afterwards.
We find northern peatlands are a C sink until pan-Arctic annual temperature reaches −2.09 to −2.89 °C. This study emphasizes the vulnerability of northern peatlands to climate change.
Lin Yu, Silvia Caldararu, Bernhard Ahrens, Thomas Wutzler, Marion Schrumpf, Julian Helfenstein, Chiara Pistocchi, and Sönke Zaehle
Biogeosciences, 20, 57–73, https://doi.org/10.5194/bg-20-57-2023, https://doi.org/10.5194/bg-20-57-2023, 2023
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In this study, we addressed a key weakness in current ecosystem models regarding the phosphorus exchange in the soil and developed a new scheme to describe this process. We showed that the new scheme improved the model performance for plant productivity, soil organic carbon, and soil phosphorus content at five beech forest sites in Germany. We claim that this new model could be used as a better tool to study ecosystems under future climate change, particularly phosphorus-limited systems.
Bimal K. Bhattacharya, Kaniska Mallick, Devansh Desai, Ganapati S. Bhat, Ross Morrison, Jamie R. Clevery, William Woodgate, Jason Beringer, Kerry Cawse-Nicholson, Siyan Ma, Joseph Verfaillie, and Dennis Baldocchi
Biogeosciences, 19, 5521–5551, https://doi.org/10.5194/bg-19-5521-2022, https://doi.org/10.5194/bg-19-5521-2022, 2022
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Evaporation retrieval in heterogeneous ecosystems is challenging due to empirical estimation of ground heat flux and complex parameterizations of conductances. We developed a parameter-sparse coupled ground heat flux-evaporation model and tested it across different limits of water stress and vegetation fraction in the Northern/Southern Hemisphere. The model performed particularly well in the savannas and showed good potential for evaporative stress monitoring from thermal infrared satellites.
Cited articles
Albergel, C., Calvet, J.-C., Mahfouf, J.-F., Rüdiger, C., Barbu, A. L., Lafont, S., Roujean, J.-L., Walker, J. P., Crapeau, M., and Wigneron, J.-P.: Monitoring of water and carbon fluxes using a land data assimilation system: a case study for southwestern France, Hydrol. Earth Syst. Sci., 14, 1109–1124, https://doi.org/10.5194/hess-14-1109-2010, 2010. a
Albergel, C., Munier, S., Leroux, D. J., Dewaele, H., Fairbairn, D., Barbu, A. L., Gelati, E., Dorigo, W., Faroux, S., Meurey, C., Le Moigne, P., Decharme, B., Mahfouf, J.-F., and Calvet, J.-C.: Sequential assimilation of satellite-derived vegetation and soil moisture products using SURFEX_v8.0: LDAS-Monde assessment over the Euro-Mediterranean area, Geosci. Model Dev., 10, 3889–3912, https://doi.org/10.5194/gmd-10-3889-2017, 2017. a, b, c, d, e, f
Albergel, C., Dutra, E., Munier, S., Calvet, J.-C., Munoz-Sabater, J., de Rosnay, P., and Balsamo, G.: ERA-5 and ERA-Interim driven ISBA land surface model simulations: which one performs better?, Hydrol. Earth Syst. Sci., 22, 3515–3532, https://doi.org/10.5194/hess-22-3515-2018, 2018a. a
Albergel, C., Munier, S., Bocher, A., Bonan, B., Zheng, Y., Draper, C., Leroux, D., and Calvet, J.-C.: LDAS-Monde Sequential Assimilation of Satellite Derived Observations Applied to the Contiguous US: An ERA-5 Driven Reanalysis of the Land Surface Variables, Remote Sens., 10, 1627,
https://doi.org/10.3390/rs10101627, 2018b. a
Albergel, C., Dutra, E., Bonan, B., Zheng, Y., Munier, S., Balsamo, G., de Rosnay, P., Muñoz-Sabater, J., and Calvet, J.-C.: Monitoring and Forecasting the Impact of the 2018 Summer Heatwave on Vegetation, Remote Sens., 11, 520, https://doi.org/10.3390/rs11050520, 2019. a, b
Albergel, C., Zheng, Y., Bonan, B., Dutra, E., Rodríguez-Fernández, N., Munier, S., Draper, C., de Rosnay, P., Muñoz-Sabater, J., Balsamo, G., Fairbairn, D., Meurey, C., and Calvet, J.-C.: Data assimilation for continuous global assessment of severe conditions over terrestrial surfaces, Hydrol. Earth Syst. Sci., 24, 4291–4316, https://doi.org/10.5194/hess-24-4291-2020, 2020. a, b, c
Anav, A., Friedlingstein, P., Beer, C., Ciais, P., Harper, A., Jones, C., Murray-Tortarolo, G., Papale, D., Parazoo, N. C., Peylin, P., Piao, S., Sitch, S., Viovy, N., Wiltshire, A., and Zhao, M.: Spatiotemporal patterns of terrestrial gross primary production: A review, Rev. Geophys., 53, 785–818, https://doi.org/10.1002/2015RG000483, 2015. a
Anderson, M., Norman, J. M., Diak, G., Kustas, W. P., and Mecikalski, J. R.: A Two-Source Time-Integrated Model for Estimating Surface Fluxes Using Thermal Infrared Remote Sensing, Remote Sens. Environ., 60, 195–216, https://doi.org/10.1016/S0034-4257(96)00215-5, 1997. a
Anderson, M. C., Norman, J. M., Mecikalski, J. R., Otkin, J. A., and Kustas, W. P.: A climatological study of evapotranspiration and moisture stress across the continental United States based on thermal remote sensing: 1. Model formulation, J. Geophys. Res., 112, D10117, https://doi.org/10.1029/2006JD007506, 2007a. a
Anderson, M. C., Norman, J. M., Mecikalski, J. R., Otkin, J. A., and Kustas,
W. P.: A climatological study of evapotranspiration and moisture stress across the continental United States based on thermal remote sensing: 2. Surface moisture climatology, J. Geophys. Res., 112, D11112, https://doi.org/10.1029/2006JD007507, 2007b. a
Anderson, M. C., Hain, C., Wardlow, B., Pimstein, A., Mecikalski, J. R., and Kustas, W. P.: Evaluation of Drought Indices Based on Thermal Remote Sensing of Evapotranspiration over the Continental United States, J. Climate, 24, 2025–2044, https://doi.org/10.1175/2010JCLI3812.1, 2011. a
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Short summary
For the first time, microwave vegetation optical depth data are assimilated in a land surface model in order to analyze leaf area index and root zone soil moisture. The advantage of microwave products is the higher observation frequency. A large variety of independent datasets are used to verify the added value of the assimilation. It is shown that the assimilation is able to improve the representation of soil moisture, vegetation conditions, and terrestrial water and carbon fluxes.
For the first time, microwave vegetation optical depth data are assimilated in a land surface...
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