Articles | Volume 10, issue 11
https://doi.org/10.5194/bg-10-7739-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-10-7739-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
28 Nov 2013
Research article |
| 28 Nov 2013
A fertile peatland forest does not constitute a major greenhouse gas sink
A. Meyer
Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
L. Tarvainen
Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden
A. Nousratpour
Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
R. G. Björk
Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden
M. Ernfors
Department of Agrosystems, Swedish University of Agricultural Sciences, Alnarp, Sweden
A. Grelle
Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
Å Kasimir Klemedtsson
Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden
A. Lindroth
Department of Physical Geography and Ecosystems Science, Lund University, Lund, Sweden
M. Räntfors
Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
T. Rütting
Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden
G. Wallin
Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
P. Weslien
Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden
L. Klemedtsson
Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden
Related authors
No articles found.
Aurora Patchett, Louise Rütting, Tobias Rütting, Samuel Bodé, Sara Hallin, Jaanis Juhanson, C. Florian Stange, Mats P. Björkman, Pascal Boeckx, Gunhild Rosqvist, and Robert G. Björk
EGUsphere, https://doi.org/10.5194/egusphere-2025-2179, https://doi.org/10.5194/egusphere-2025-2179, 2025
Short summary
Short summary
This study explores how different types of fungi and plant species affect nitrogen cycling in Arctic soils. By removing certain plants, we found that fungi associated with shrubs speed up nitrogen processes more than those with grasses. Dominant plant species enhance nitrogen recycling, while rare species increase nitrogen loss. These findings help predict how Arctic ecosystems respond to climate change, highlighting the importance of fungi and plant diversity in regulating ecosystem processes.
Aki Vähä, Timo Vesala, Sofya Guseva, Anders Lindroth, Andreas Lorke, Sally MacIntyre, and Ivan Mammarella
Biogeosciences, 22, 1651–1671, https://doi.org/10.5194/bg-22-1651-2025, https://doi.org/10.5194/bg-22-1651-2025, 2025
Short summary
Short summary
Boreal rivers are significant sources of carbon dioxide (CO2) and methane (CH4) for the atmosphere, but the controls of these emissions are uncertain. We measured 4 months of CO2 and CH4 exchanges between a regulated boreal river and the atmosphere with eddy covariance. We found statistical relationships between the gas exchange and several environmental variables, the most important of which were dissolved CO2 partial pressure in water, wind speed and water temperature.
Fredrik Lagergren, Robert G. Björk, Camilla Andersson, Danijel Belušić, Mats P. Björkman, Erik Kjellström, Petter Lind, David Lindstedt, Tinja Olenius, Håkan Pleijel, Gunhild Rosqvist, and Paul A. Miller
Biogeosciences, 21, 1093–1116, https://doi.org/10.5194/bg-21-1093-2024, https://doi.org/10.5194/bg-21-1093-2024, 2024
Short summary
Short summary
The Fennoscandian boreal and mountain regions harbour a wide range of ecosystems sensitive to climate change. A new, highly resolved high-emission climate scenario enabled modelling of the vegetation development in this region at high resolution for the 21st century. The results show dramatic south to north and low- to high-altitude shifts of vegetation zones, especially for the open tundra environments, which will have large implications for nature conservation, reindeer husbandry and forestry.
Cole G. Brachmann, Tage Vowles, Riikka Rinnan, Mats P. Björkman, Anna Ekberg, and Robert G. Björk
Biogeosciences, 20, 4069–4086, https://doi.org/10.5194/bg-20-4069-2023, https://doi.org/10.5194/bg-20-4069-2023, 2023
Short summary
Short summary
Herbivores change plant communities through grazing, altering the amount of CO2 and plant-specific chemicals (termed VOCs) emitted. We tested this effect by excluding herbivores and studying the CO2 and VOC emissions. Herbivores reduced CO2 emissions from a meadow community and altered VOC composition; however, community type had the strongest effect on the amount of CO2 and VOCs released. Herbivores can mediate greenhouse gas emissions, but the effect is marginal and community dependent.
Janne Rinne, Patryk Łakomiec, Patrik Vestin, Joel D. White, Per Weslien, Julia Kelly, Natascha Kljun, Lena Ström, and Leif Klemedtsson
Biogeosciences, 19, 4331–4349, https://doi.org/10.5194/bg-19-4331-2022, https://doi.org/10.5194/bg-19-4331-2022, 2022
Short summary
Short summary
The study uses the stable isotope 13C of carbon in methane to investigate the origins of spatial and temporal variation in methane emitted by a temperate wetland ecosystem. The results indicate that methane production is more important for spatial variation than methane consumption by micro-organisms. Temporal variation on a seasonal timescale is most likely affected by more than one driver simultaneously.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
Short summary
Short summary
We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Adrian Gustafson, Paul A. Miller, Robert G. Björk, Stefan Olin, and Benjamin Smith
Biogeosciences, 18, 6329–6347, https://doi.org/10.5194/bg-18-6329-2021, https://doi.org/10.5194/bg-18-6329-2021, 2021
Short summary
Short summary
We performed model simulations of vegetation change for a historic period and a range of climate change scenarios at a high spatial resolution. Projected treeline advance continued at the same or increased rates compared to our historic simulation. Temperature isotherms advanced faster than treelines, revealing a lag in potential vegetation shifts that was modulated by nitrogen availability. At the year 2100 projected treelines had advanced by 45–195 elevational metres depending on the scenario.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
Short summary
Short summary
Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Pertti Hari, Steffen Noe, Sigrid Dengel, Jan Elbers, Bert Gielen, Veli-Matti Kerminen, Bart Kruijt, Liisa Kulmala, Anders Lindroth, Ivan Mammarella, Tuukka Petäjä, Guy Schurgers, Anni Vanhatalo, Markku Kulmala, and Jaana Bäck
Atmos. Chem. Phys., 18, 13321–13328, https://doi.org/10.5194/acp-18-13321-2018, https://doi.org/10.5194/acp-18-13321-2018, 2018
Short summary
Short summary
The development of eddy-covariance measurements of ecosystem CO2 fluxes began a new era in the field studies of photosynthesis. The interpretation of the very variable CO2 fluxes in evergreen forests has been problematic especially in seasonal transition times. We apply two theoretical needle-level equations and show they can predict photosynthetic CO2 flux between the atmosphere and Scots pine forests. This has strong implications for the interpretation of the global change and boreal forests.
Hongxing He, Astrid Meyer, Per-Erik Jansson, Magnus Svensson, Tobias Rütting, and Leif Klemedtsson
Geosci. Model Dev., 11, 725–751, https://doi.org/10.5194/gmd-11-725-2018, https://doi.org/10.5194/gmd-11-725-2018, 2018
Short summary
Short summary
Ectomycorrhizal fungi (ECM) have shown a major impact on forest C and N cycles, but are currently neglected in most ecosystem models. We thus implemented the previously developed ectomycorrhizal fungi model, MYCOFON, into a well-established ecosystem model, CoupModel. This paper describes the key components and features of Coup-MYCOFON. The new version of CoupModel can now simulate C and N fluxes and pools, explicitly accounting for links and feedbacks among plant, soil, and ECM.
Kukka-Maaria Erkkilä, Anne Ojala, David Bastviken, Tobias Biermann, Jouni J. Heiskanen, Anders Lindroth, Olli Peltola, Miitta Rantakari, Timo Vesala, and Ivan Mammarella
Biogeosciences, 15, 429–445, https://doi.org/10.5194/bg-15-429-2018, https://doi.org/10.5194/bg-15-429-2018, 2018
Short summary
Short summary
Global estimates of freshwater greenhouse gas emissions are usually based on simple gas transfer models that underestimate the emissions. Thus, comparison of different gas transfer models is required for evaluating the uncertainties. This study compares three commonly used methods for estimating greenhouse gas emissions over lakes. We conclude that simple gas transfer models underestimate the emissions and more recent models should be used for global freshwater greenhouse gas emission estimates.
Tobias Rütting
Biogeosciences, 14, 751–754, https://doi.org/10.5194/bg-14-751-2017, https://doi.org/10.5194/bg-14-751-2017, 2017
Short summary
Short summary
The response of ecosystems to elevated atmospheric CO2 is affected by nitrogen (N) availability. It has been hypothesized that N limitation becomes progressively stronger (progressive N limitation, PNL). Most long-term free air CO2 enrichment studies did not see a PNL. This paper shows that enhanced biological N2 fixation only prevents PNL in plant communities with symbiotic N2 fixation. In most ecosystems a stimulation of gross N mineralization prevents the development of a PNL.
Louise C. Andresen, Anna-Karin Björsne, Samuel Bodé, Leif Klemedtsson, Pascal Boeckx, and Tobias Rütting
SOIL, 2, 433–442, https://doi.org/10.5194/soil-2-433-2016, https://doi.org/10.5194/soil-2-433-2016, 2016
Short summary
Short summary
In soil the constant transport of nitrogen (N) containing compounds from soil organic matter and debris out into the soil water, is controlled by soil microbes and enzymes that literally cut down polymers (such as proteins) into single amino acids (AA), hereafter microbes consume AAs and excrete ammonium back to the soil. We developed a method for analysing N turnover and flow of organic N, based on parallel 15N tracing experiments. The numerical model gives robust and simultaneous quantification.
Christian Stiegler, Magnus Lund, Torben Røjle Christensen, Mikhail Mastepanov, and Anders Lindroth
The Cryosphere, 10, 1395–1413, https://doi.org/10.5194/tc-10-1395-2016, https://doi.org/10.5194/tc-10-1395-2016, 2016
Short summary
Short summary
In this study we investigate the impact of strong variability in snow accumulation during 2 subsequent years (2013–2014) on the land–atmosphere interactions and surface energy exchange in two high-Arctic tundra ecosystems (wet fen and dry heath) in Zackenberg, Northeast Greenland. We observe that the energy balance during the snowmelt periods and growing seasons was strongly regulated by the availability of snow meltwater, with strong impact on the overall ecosystem performance.
Hongxing He, Per-Erik Jansson, Magnus Svensson, Jesper Björklund, Lasse Tarvainen, Leif Klemedtsson, and Åsa Kasimir
Biogeosciences, 13, 2305–2318, https://doi.org/10.5194/bg-13-2305-2016, https://doi.org/10.5194/bg-13-2305-2016, 2016
Short summary
Short summary
We simulate CO2 and N2O dynamics over a full forest rotation on drained agricultural peatland, using CoupModel. Data used for validation include tree ring-derived biomass data (1966–2011) and measured abiotic and soil emission data (2006–2011). The results show that the C fixed in forest biomass is slightly larger than the soil losses over the full rotation period. However when including N2O and indirect emissions from forest thinning products, the forest system switches to a large GHG source.
L. Wingate, J. Ogée, E. Cremonese, G. Filippa, T. Mizunuma, M. Migliavacca, C. Moisy, M. Wilkinson, C. Moureaux, G. Wohlfahrt, A. Hammerle, L. Hörtnagl, C. Gimeno, A. Porcar-Castell, M. Galvagno, T. Nakaji, J. Morison, O. Kolle, A. Knohl, W. Kutsch, P. Kolari, E. Nikinmaa, A. Ibrom, B. Gielen, W. Eugster, M. Balzarolo, D. Papale, K. Klumpp, B. Köstner, T. Grünwald, R. Joffre, J.-M. Ourcival, M. Hellstrom, A. Lindroth, C. George, B. Longdoz, B. Genty, J. Levula, B. Heinesch, M. Sprintsin, D. Yakir, T. Manise, D. Guyon, H. Ahrends, A. Plaza-Aguilar, J. H. Guan, and J. Grace
Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, https://doi.org/10.5194/bg-12-5995-2015, 2015
Short summary
Short summary
The timing of plant development stages and their response to climate and management were investigated using a network of digital cameras installed across different European ecosystems. Using the relative red, green and blue content of images we showed that the green signal could be used to estimate the length of the growing season in broadleaf forests. We also developed a model that predicted the seasonal variations of camera RGB signals and how they relate to leaf pigment content and area well.
F. Minunno, M. Peltoniemi, S. Launiainen, M. Aurela, A. Lindroth, A. Lohila, I. Mammarella, K. Minkkinen, and A. Mäkelä
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmdd-8-5089-2015, https://doi.org/10.5194/gmdd-8-5089-2015, 2015
Revised manuscript not accepted
L. C. Andresen, S. Bode, A. Tietema, P. Boeckx, and T. Rütting
SOIL, 1, 341–349, https://doi.org/10.5194/soil-1-341-2015, https://doi.org/10.5194/soil-1-341-2015, 2015
G. Schurgers, F. Lagergren, M. Mölder, and A. Lindroth
Biogeosciences, 12, 237–256, https://doi.org/10.5194/bg-12-237-2015, https://doi.org/10.5194/bg-12-237-2015, 2015
E. Sundqvist, P. Vestin, P. Crill, T. Persson, and A. Lindroth
Biogeosciences, 11, 6095–6105, https://doi.org/10.5194/bg-11-6095-2014, https://doi.org/10.5194/bg-11-6095-2014, 2014
E. Podgrajsek, E. Sahlée, D. Bastviken, J. Holst, A. Lindroth, L. Tranvik, and A. Rutgersson
Biogeosciences, 11, 4225–4233, https://doi.org/10.5194/bg-11-4225-2014, https://doi.org/10.5194/bg-11-4225-2014, 2014
O. Peltola, A. Hensen, C. Helfter, L. Belelli Marchesini, F. C. Bosveld, W. C. M. van den Bulk, J. A. Elbers, S. Haapanala, J. Holst, T. Laurila, A. Lindroth, E. Nemitz, T. Röckmann, A. T. Vermeulen, and I. Mammarella
Biogeosciences, 11, 3163–3186, https://doi.org/10.5194/bg-11-3163-2014, https://doi.org/10.5194/bg-11-3163-2014, 2014
W. Yuan, S. Liu, W. Cai, W. Dong, J. Chen, A. Arain, P. D. Blanken, A. Cescatti, G. Wohlfahrt, T. Georgiadis, L. Genesio, D. Gianelle, A. Grelle, G. Kiely, A. Knohl, D. Liu, M. Marek, L. Merbold, L. Montagnani, O. Panferov, M. Peltoniemi, S. Rambal, A. Raschi, A. Varlagin, and J. Xia
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmdd-6-5475-2013, https://doi.org/10.5194/gmdd-6-5475-2013, 2013
Revised manuscript not accepted
R. M. Rees, J. Augustin, G. Alberti, B. C. Ball, P. Boeckx, A. Cantarel, S. Castaldi, N. Chirinda, B. Chojnicki, M. Giebels, H. Gordon, B. Grosz, L. Horvath, R. Juszczak, Å. Kasimir Klemedtsson, L. Klemedtsson, S. Medinets, A. Machon, F. Mapanda, J. Nyamangara, J. E. Olesen, D. S. Reay, L. Sanchez, A. Sanz Cobena, K. A. Smith, A. Sowerby, M. Sommer, J. F. Soussana, M. Stenberg, C. F. E. Topp, O. van Cleemput, A. Vallejo, C. A. Watson, and M. Wuta
Biogeosciences, 10, 2671–2682, https://doi.org/10.5194/bg-10-2671-2013, https://doi.org/10.5194/bg-10-2671-2013, 2013
K. L. McGeough, R. J. Laughlin, C. J. Watson, C. Müller, M. Ernfors, E. Cahalan, and K. G. Richards
Biogeosciences, 9, 4909–4919, https://doi.org/10.5194/bg-9-4909-2012, https://doi.org/10.5194/bg-9-4909-2012, 2012
Related subject area
Biogeochemistry: Air - Land Exchange
Altered seasonal sensitivity of net ecosystem exchange to controls driven by nutrient balances in a semi-arid savanna
Peltigera lichen thalli produce highly potent ice-nucleating agents
Constraining 2010–2020 Amazonian carbon flux estimates with satellite solar-induced fluorescence (SIF)
Does increased spatial replication above heterogeneous agroforestry improve the representativeness of eddy covariance measurements?
An elucidatory model of oxygen's partial pressure inside substomatal cavities
Aggregation of ice-nucleating macromolecules from Betula pendula pollen determines ice nucleation efficiency
Quantifying the soil sink of atmospheric Hydrogen: a full year of field measurements from grassland and forest soils in the UK
Evaluating adsorption isotherm models for determining the partitioning of ammonium between soil and soil pore water in environmental soil samples
Similar freezing spectra of particles in plant canopies and in the air at a high-altitude site
Anticorrelation of net uptake of atmospheric CO2 by the world ocean and terrestrial biosphere in current carbon cycle models
Impact of meteorological conditions on the biogenic volatile organic compound (BVOC) emission rate from eastern Mediterranean vegetation under drought
Monitoring cropland daily carbon dioxide exchange at field scales with Sentinel-2 satellite imagery
Compound soil and atmospheric drought (CSAD) events and CO2 fluxes of a mixed deciduous forest: the occurrence, impact, and temporal contribution of main drivers
Potential of carbon uptake and local aerosol production in boreal and hemi-boreal ecosystems across Finland and in Estonia
The influence of plant water stress on vegetation–atmosphere exchanges: implications for ozone modelling
High interspecific variability in ice nucleation activity suggests pollen ice nucleators are incidental
Using automated machine learning for the upscaling of gross primary productivity
Interpretability of negative latent heat fluxes from eddy covariance measurements in dry conditions
Forest-floor respiration, N2O fluxes, and CH4 fluxes in a subalpine spruce forest: drivers and annual budgets
Enhanced net CO2 exchange of a semideciduous forest in the southern Amazon due to diffuse radiation from biomass burning
Observational relationships between ammonia, carbon dioxide and water vapor under a wide range of meteorological and turbulent conditions: RITA-2021 campaign
Environmental controls of winter soil carbon dioxide fluxes in boreal and tundra environments
Origin of secondary fatty alcohols in atmospheric aerosols in a cool–temperate forest based on their mass size distributions
Sap flow and leaf gas exchange response to a drought and heatwave in urban green spaces in a Nordic city
Changes in biogenic volatile organic compound emissions in response to the El Niño–Southern Oscillation
Rethinking the deployment of static chambers for CO2 flux measurement in dry desert soils
Lichen species across Alaska produce highly active and stable ice nucleators
A differentiable, physics-informed ecosystem modeling and learning framework for large-scale inverse problems: demonstration with photosynthesis simulations
Snow–vegetation–atmosphere interactions in alpine tundra
Synergy between TROPOMI sun-induced chlorophyll fluorescence and MODIS spectral reflectance for understanding the dynamics of gross primary productivity at Integrated Carbon Observatory System (ICOS) ecosystem flux sites
Atmospheric deposition of reactive nitrogen to a deciduous forest in the southern Appalachian Mountains
Tropical cyclones facilitate recovery of forest leaf area from dry spells in East Asia
Minor contributions of daytime monoterpenes are major contributors to atmospheric reactivity
Using atmospheric observations to quantify annual biogenic carbon dioxide fluxes on the Alaska North Slope
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part II: Modeling annual budgets
Growth and actual leaf temperature modulate CO2 responsiveness of monoterpene emissions from holm oak in opposite ways
Multi-year observations reveal a larger than expected autumn respiration signal across northeast Eurasia
Reviews and syntheses: VOC emissions from soil cover in boreal and temperate natural ecosystems of the Northern Hemisphere
Internal tree cycling and atmospheric archiving of mercury: examination with concentration and stable isotope analyses
Contrasting drought legacy effects on gross primary productivity in a mixed versus pure beech forest
CO2 and CH4 exchanges between moist moss tundra and atmosphere on Kapp Linné, Svalbard
Recent extreme drought events in the Amazon rainforest: assessment of different precipitation and evapotranspiration datasets and drought indicators
Variability and uncertainty in flux-site-scale net ecosystem exchange simulations based on machine learning and remote sensing: a systematic evaluation
Update of a biogeochemical model with process-based algorithms to predict ammonia volatilization from fertilized cultivated uplands and rice paddy fields
Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment
Climatic variation drives loss and restructuring of carbon and nitrogen in boreal forest wildfire
Gaps in network infrastructure limit our understanding of biogenic methane emissions for the United States
Changes of the aerodynamic characteristics of a flux site after an extensive windthrow
Carbon sequestration potential of street tree plantings in Helsinki
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Laura Nadolski, Tarek S. El-Madany, Jacob Nelson, Arnaud Carrara, Gerardo Moreno, Richard Nair, Yunpeng Luo, Anke Hildebrandt, Victor Rolo, Markus Reichstein, and Sung-Ching Lee
Biogeosciences, 22, 2935–2958, https://doi.org/10.5194/bg-22-2935-2025, https://doi.org/10.5194/bg-22-2935-2025, 2025
Short summary
Short summary
Semi-arid ecosystems are crucial for Earth's carbon balance and are sensitive to changes in nitrogen (N) and phosphorus (P) levels. Their carbon dynamics are complex and not fully understood. We studied how long-term nutrient changes affect carbon exchange. In summer, the addition of N+P changed plant composition and productivity. In transitional seasons, carbon exchange was less weather-dependent with N. The addition of N and N+P increases carbon-exchange variability, driven by grass greenness.
Rosemary J. Eufemio, Galit Renzer, Mariah Rojas, Jolanta Miadlikowska, Todd L. Sformo, François Lutzoni, Boris A. Vinatzer, and Konrad Meister
Biogeosciences, 22, 2087–2096, https://doi.org/10.5194/bg-22-2087-2025, https://doi.org/10.5194/bg-22-2087-2025, 2025
Short summary
Short summary
Biological ice nucleation plays key roles in organism survival and in shaping Earth’s atmospheric patterns. Our pan-American screening of Peltigera lichens reveals that the lichen thalli produce highly active ice nucleators (INs) resistant to freeze–thaw cycles. Notably, a pure fungal culture from Peltigera britannica released the most potent INs reported to date. Given the global abundance of these lichens, the INs may be important contributors to atmospheric processes.
Archana Dayalu, Marikate Mountain, Bharat Rastogi, John B. Miller, and Luciana Gatti
Biogeosciences, 22, 1509–1528, https://doi.org/10.5194/bg-22-1509-2025, https://doi.org/10.5194/bg-22-1509-2025, 2025
Short summary
Short summary
The Amazon is facing unprecedented disturbance. Determining trends in Amazonia's carbon balance and its sensitivity to disturbance requires reliable vegetation models that adequately capture how its ecosystems exchange carbon with the atmosphere. Using ground- and satellite-based ecosystem products, we present an improved model of land–atmosphere vegetation carbon exchange across the Amazon. Our model agrees with independent aircraft observations from different locations.
José Ángel Callejas-Rodelas, Alexander Knohl, Ivan Mammarella, Timo Vesala, Olli Peltola, and Christian Markwitz
EGUsphere, https://doi.org/10.5194/egusphere-2025-810, https://doi.org/10.5194/egusphere-2025-810, 2025
Short summary
Short summary
The spatial variability of CO2 and water vapour exchanges with the atmosphere was quantified above an agroforestry system, and further compared to a monocropping system, using a total of four eddy covariance stations. The variability of fluxes within the agroforestry was found to be as large as the variability between agroforestry and monocropping, induced by the heterogeneity of the site, which highlights the need for replicated measurements above such ecosystems.
Andrew S. Kowalski
Biogeosciences, 22, 785–789, https://doi.org/10.5194/bg-22-785-2025, https://doi.org/10.5194/bg-22-785-2025, 2025
Short summary
Short summary
The laws of physics show that leaf oxygen is not photosynthetically enriched but extremely dilute due to the overwhelming effects of humidification. This challenges the prevailing diffusion-only paradigm regarding leaf gas exchanges because non-diffusive transport is required. Such transport also explains why fluxes of carbon dioxide and water vapour become decoupled at very high temperatures, as has been observed but not explained by plant physiologists.
Florian Wieland, Nadine Bothen, Ralph Schwidetzky, Teresa M. Seifried, Paul Bieber, Ulrich Pöschl, Konrad Meister, Mischa Bonn, Janine Fröhlich-Nowoisky, and Hinrich Grothe
Biogeosciences, 22, 103–115, https://doi.org/10.5194/bg-22-103-2025, https://doi.org/10.5194/bg-22-103-2025, 2025
Short summary
Short summary
Betula pendula is a widespread birch tree species containing ice nucleation agents that can trigger the freezing of cloud droplets and thereby alter the evolution of clouds. Our study identifies three distinct ice-nucleating macromolecule (INM) aggregates of varying size that can nucleate ice at temperatures up to –5.4°C. Our findings suggest that these vegetation-derived particles may influence atmospheric processes, weather, and climate more strongly than previously thought.
Nicholas Cowan, Toby Roberts, Mark Hanlon, Aurelia Bezanger, Galina Toteva, Alex Tweedie, Karen Yeung, Ajinkya Deshpande, Peter Levy, Ute Skiba, Eiko Nemitz, and Julia Drewer
EGUsphere, https://doi.org/10.5194/egusphere-2024-3654, https://doi.org/10.5194/egusphere-2024-3654, 2024
Short summary
Short summary
We measured soil hydrogen (H2) fluxes from two field sites, a managed grassland and a planted deciduous woodland, with flux measurements of H2 covering full seasonal cycles. We estimate annual H2 uptake of -3.1 ± 0.1 and -12.0 ± 0.4 kg H2 ha-1 yr-1 for the grassland and woodland sites, respectively. Soil moisture was found to be the primary driver of H2 uptake, with the clay content of the soils providing a physical barrier which limited H2 uptake.
Matthew G. Davis, Kevin Yan, and Jennifer G. Murphy
Biogeosciences, 21, 5381–5392, https://doi.org/10.5194/bg-21-5381-2024, https://doi.org/10.5194/bg-21-5381-2024, 2024
Short summary
Short summary
Ammonia applied as fertilizer can volatilize into the atmosphere. This can threaten vulnerable ecosystems and human health. We investigated the partitioning of ammonia between an immobile adsorbed phase and mobile aqueous phase using several adsorption models. Using the Temkin model we determined that previous approaches to this issue may overestimate the quantity available for exchange by a factor of 5–20, suggesting that ammonia emissions from soil may be overestimated.
Annika Einbock and Franz Conen
Biogeosciences, 21, 5219–5231, https://doi.org/10.5194/bg-21-5219-2024, https://doi.org/10.5194/bg-21-5219-2024, 2024
Short summary
Short summary
A small fraction of particles found at great heights in the atmosphere can freeze cloud droplets at temperatures of ≥ −10 °C and thus influence cloud properties. We provide a novel type of evidence that plant canopies are a major source of such biological ice-nucleating particles in the air above the Alps, potentially affecting mixed-phase cloud development.
Stephen E. Schwartz
Biogeosciences, 21, 5045–5057, https://doi.org/10.5194/bg-21-5045-2024, https://doi.org/10.5194/bg-21-5045-2024, 2024
Short summary
Short summary
Anticorrelation in uptake of atmospheric CO2 following pulse emission or abrupt cessation of emissions is examined in two key model intercomparison studies. In both studies net transfer coefficients from the atmosphere to the world ocean and the terrestrial biosphere are anticorrelated across models, reducing inter-model diversity in decrease of atmospheric CO2 following the perturbation, increasing uncertainties of global warming potentials and consequences of prospective emission reductions.
Qian Li, Gil Lerner, Einat Bar, Efraim Lewinsohn, and Eran Tas
Biogeosciences, 21, 4133–4147, https://doi.org/10.5194/bg-21-4133-2024, https://doi.org/10.5194/bg-21-4133-2024, 2024
Short summary
Short summary
Our research indicates that instantaneous changes in meteorological parameters better reflect drought-induced changes in the emission rates of biogenic volatile organic compounds (BVOCs) from natural vegetation than their absolute values. However, following a small amount of irrigation, this trend became more moderate or reversed, accompanied by a dramatic increase in BVOC emission rates. These findings advance our understanding of BVOC emissions under climate change.
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
Biogeosciences, 21, 3593–3616, https://doi.org/10.5194/bg-21-3593-2024, https://doi.org/10.5194/bg-21-3593-2024, 2024
Short summary
Short summary
To improve the accuracy of spatial carbon exchange estimates, we evaluated simple linear models for net ecosystem exchange (NEE) and gross primary productivity (GPP) and how they can be used to upscale the CO2 exchange of agricultural fields. The models are solely driven by Sentinel-2-derived vegetation indices (VIs). Evaluations show that different VIs have variable power to estimate NEE and GPP of crops in different years. The overall performance is as good as results from complex crop models.
Liliana Scapucci, Ankit Shekhar, Sergio Aranda-Barranco, Anastasiia Bolshakova, Lukas Hörtnagl, Mana Gharun, and Nina Buchmann
Biogeosciences, 21, 3571–3592, https://doi.org/10.5194/bg-21-3571-2024, https://doi.org/10.5194/bg-21-3571-2024, 2024
Short summary
Short summary
Forests face increased exposure to “compound soil and atmospheric drought” (CSAD) events due to global warming. We examined the impacts and drivers of CO2 fluxes during CSAD events at multiple layers of a deciduous forest over 18 years. Results showed reduced net ecosystem productivity and forest-floor respiration during CSAD events, mainly driven by soil and atmospheric drought. This unpredictability in forest CO2 fluxes jeopardises reforestation projects aimed at mitigating CO2 emissions.
Piaopiao Ke, Anna Lintunen, Pasi Kolari, Annalea Lohila, Santeri Tuovinen, Janne Lampilahti, Roseline Thakur, Maija Peltola, Otso Peräkylä, Tuomo Nieminen, Ekaterina Ezhova, Mari Pihlatie, Asta Laasonen, Markku Koskinen, Helena Rautakoski, Laura Heimsch, Tom Kokkonen, Aki Vähä, Ivan Mammarella, Steffen Noe, Jaana Bäck, Veli-Matti Kerminen, and Markku Kulmala
EGUsphere, https://doi.org/10.5194/egusphere-2024-1967, https://doi.org/10.5194/egusphere-2024-1967, 2024
Short summary
Short summary
Our research explores diverse ecosystems’ role in climate cooling via the concept of CarbonSink+ Potential. We measured CO2 uptake and loaal aerosol production in forests, farms, peatlands, urban gardens, and coastal areas across Finland and Estonia. The long-term data reveal that while forests are vital regarding CarbonSink+ Potential, farms and urban gardens also play significant roles. These insights can help optimize management policy of natural resource to mitigate global warming.
Tamara Emmerichs, Yen-Sen Lu, and Domenico Taraborrelli
Biogeosciences, 21, 3251–3269, https://doi.org/10.5194/bg-21-3251-2024, https://doi.org/10.5194/bg-21-3251-2024, 2024
Short summary
Short summary
We assess the representation of the plant response to surface water in a global atmospheric chemistry model. This sensitivity is crucial for the return of precipitation back into the atmosphere and thus significantly impacts the representation of weather as well as air quality. The newly implemented response function reduces this process and has a better comparison with satellite observations. This yields a higher intensity of unusual warm periods and higher production of air pollutants.
Nina L. H. Kinney, Charles A. Hepburn, Matthew I. Gibson, Daniel Ballesteros, and Thomas F. Whale
Biogeosciences, 21, 3201–3214, https://doi.org/10.5194/bg-21-3201-2024, https://doi.org/10.5194/bg-21-3201-2024, 2024
Short summary
Short summary
Molecules released from plant pollen induce the formation of ice from supercooled water at temperatures warm enough to suggest an underlying function for this activity. In this study we show that ice nucleators are ubiquitous in pollen. We suggest the molecules responsible fulfil some unrelated biological function and nucleate ice incidentally. The ubiquity of ice-nucleating molecules in pollen and particularly active examples reveal a greater potential for pollen to impact weather and climate.
Max Gaber, Yanghui Kang, Guy Schurgers, and Trevor Keenan
Biogeosciences, 21, 2447–2472, https://doi.org/10.5194/bg-21-2447-2024, https://doi.org/10.5194/bg-21-2447-2024, 2024
Short summary
Short summary
Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays a vital role in the carbon cycle. We can measure GPP locally, but producing larger and continuous estimates is challenging. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
Short summary
Short summary
Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Luana Krebs, Susanne Burri, Iris Feigenwinter, Mana Gharun, Philip Meier, and Nina Buchmann
Biogeosciences, 21, 2005–2028, https://doi.org/10.5194/bg-21-2005-2024, https://doi.org/10.5194/bg-21-2005-2024, 2024
Short summary
Short summary
This study explores year-round forest-floor greenhouse gas (GHG) fluxes in a Swiss spruce forest. Soil temperature and snow depth affected forest-floor respiration, while CH4 uptake was linked to snow cover. Negligible N2O fluxes were observed. In 2022, a warm year, CO2 emissions notably increased. The study suggests rising forest-floor GHG emissions due to climate change, impacting carbon sink behavior. Thus, for future forest management, continuous year-round GHG flux measurements are crucial.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
Short summary
Short summary
The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Ruben B. Schulte, Jordi Vilà-Guerau de Arellano, Susanna Rutledge-Jonker, Shelley van der Graaf, Jun Zhang, and Margreet C. van Zanten
Biogeosciences, 21, 557–574, https://doi.org/10.5194/bg-21-557-2024, https://doi.org/10.5194/bg-21-557-2024, 2024
Short summary
Short summary
We analyzed measurements with the aim of finding relations between the surface atmosphere exchange of NH3 and the CO2 uptake and transpiration by vegetation. We found a high correlation of daytime NH3 emissions with both latent heat flux and photosynthetically active radiation. Very few simultaneous measurements of NH3, CO2 fluxes and meteorological variables exist at sub-diurnal timescales. This study paves the way to finding more robust relations between the NH3 exchange flux and CO2 uptake.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Carolina Voigt, Nick Rutter, Paul Mann, Jean-Daniel Sylvain, and Alexandre Roy
Biogeosciences, 20, 5087–5108, https://doi.org/10.5194/bg-20-5087-2023, https://doi.org/10.5194/bg-20-5087-2023, 2023
Short summary
Short summary
We present an analysis of soil CO2 emissions in boreal and tundra regions during the non-growing season. We show that when the soil is completely frozen, soil temperature is the main control on CO2 emissions. When the soil is around the freezing point, with a mix of liquid water and ice, the liquid water content is the main control on CO2 emissions. This study highlights that the vegetation–snow–soil interactions must be considered to understand soil CO2 emissions during the non-growing season.
Yuhao Cui, Eri Tachibana, Kimitaka Kawamura, and Yuzo Miyazaki
Biogeosciences, 20, 4969–4980, https://doi.org/10.5194/bg-20-4969-2023, https://doi.org/10.5194/bg-20-4969-2023, 2023
Short summary
Short summary
Fatty alcohols (FAs) are major components of surface lipids in plant leaves and serve as surface-active aerosols. Our study on the aerosol size distributions in a forest suggests that secondary FAs (SFAs) originated from plant waxes and that leaf senescence status is likely an important factor controlling the size distribution of SFAs. This study provides new insights into the sources of primary biological aerosol particles (PBAPs) and their effects on the aerosol ice nucleation activity.
Joyson Ahongshangbam, Liisa Kulmala, Jesse Soininen, Yasmin Frühauf, Esko Karvinen, Yann Salmon, Anna Lintunen, Anni Karvonen, and Leena Järvi
Biogeosciences, 20, 4455–4475, https://doi.org/10.5194/bg-20-4455-2023, https://doi.org/10.5194/bg-20-4455-2023, 2023
Short summary
Short summary
Urban vegetation is important for removing urban CO2 emissions and cooling. We studied the response of urban trees' functions (photosynthesis and transpiration) to a heatwave and drought at four urban green areas in the city of Helsinki. We found that tree water use was increased during heatwave and drought periods, but there was no change in the photosynthesis rates. The heat and drought conditions were severe at the local scale but were not excessive enough to restrict urban trees' functions.
Ryan Vella, Andrea Pozzer, Matthew Forrest, Jos Lelieveld, Thomas Hickler, and Holger Tost
Biogeosciences, 20, 4391–4412, https://doi.org/10.5194/bg-20-4391-2023, https://doi.org/10.5194/bg-20-4391-2023, 2023
Short summary
Short summary
We investigated the effect of the El Niño–Southern Oscillation (ENSO) on biogenic volatile organic compound (BVOC) emissions from plants. ENSO events can cause a significant increase in these emissions, which have a long-term impact on the Earth's atmosphere. Persistent ENSO conditions can cause long-term changes in vegetation, resulting in even higher BVOC emissions. We link ENSO-induced emission anomalies with driving atmospheric and vegetational variables.
Nadav Bekin and Nurit Agam
Biogeosciences, 20, 3791–3802, https://doi.org/10.5194/bg-20-3791-2023, https://doi.org/10.5194/bg-20-3791-2023, 2023
Short summary
Short summary
The mechanisms of soil CO2 flux in dry desert soils are not fully understood. Yet studies conducted in desert ecosystems rarely discuss potential errors related to using the commonly used flux chambers in dry and bare soils. In our study, the conventional deployment practice of the chambers underestimated the instantaneous CO2 flux by up to 50 % and the total daily CO2 uptake by 35 %. This suggests that desert soils are a larger carbon sink than previously reported.
Rosemary J. Eufemio, Ingrid de Almeida Ribeiro, Todd L. Sformo, Gary A. Laursen, Valeria Molinero, Janine Fröhlich-Nowoisky, Mischa Bonn, and Konrad Meister
Biogeosciences, 20, 2805–2812, https://doi.org/10.5194/bg-20-2805-2023, https://doi.org/10.5194/bg-20-2805-2023, 2023
Short summary
Short summary
Lichens, the dominant vegetation in the Arctic, contain ice nucleators (INs) that enable freezing close to 0°C. Yet the abundance, diversity, and function of lichen INs is unknown. Our screening of lichens across Alaska reveal that most species have potent INs. We find that lichens contain two IN populations which retain activity under environmentally relevant conditions. The ubiquity and stability of lichen INs suggest that they may have considerable impacts on local atmospheric patterns.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
Short summary
Short summary
Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
Short summary
Short summary
We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Hamadou Balde, Gabriel Hmimina, Yves Goulas, Gwendal Latouche, and Kamel Soudani
Biogeosciences, 20, 1473–1490, https://doi.org/10.5194/bg-20-1473-2023, https://doi.org/10.5194/bg-20-1473-2023, 2023
Short summary
Short summary
This study focuses on the relationship between sun-induced chlorophyll fluorescence (SIF) and ecosystem gross primary productivity (GPP) across the ICOS European flux tower network. It shows that SIF, coupled with reflectance observations, explains over 80 % of the GPP variability across diverse ecosystems but fails to bring new information compared to reflectance alone at coarse spatial scales (~5 km). These findings have applications in agriculture and ecophysiological studies.
John T. Walker, Xi Chen, Zhiyong Wu, Donna Schwede, Ryan Daly, Aleksandra Djurkovic, A. Christopher Oishi, Eric Edgerton, Jesse Bash, Jennifer Knoepp, Melissa Puchalski, John Iiames, and Chelcy F. Miniat
Biogeosciences, 20, 971–995, https://doi.org/10.5194/bg-20-971-2023, https://doi.org/10.5194/bg-20-971-2023, 2023
Short summary
Short summary
Better estimates of atmospheric nitrogen (N) deposition are needed to accurately assess ecosystem risk and impacts from deposition of nutrients and acidity. Using measurements and modeling, we estimate total N deposition of 6.7 kg N ha−1 yr−1 at a forest site in the southern Appalachian Mountains, a region sensitive to atmospheric deposition. Reductions in deposition of reduced forms of N (ammonia and ammonium) will be needed to meet the lowest estimates of N critical loads for the region.
Yi-Ying Chen and Sebastiaan Luyssaert
Biogeosciences, 20, 349–363, https://doi.org/10.5194/bg-20-349-2023, https://doi.org/10.5194/bg-20-349-2023, 2023
Short summary
Short summary
Tropical cyclones are typically assumed to be associated with ecosystem damage. This study challenges this assumption and suggests that instead of reducing leaf area, cyclones in East Asia may increase leaf area by alleviating water stress.
Deborah F. McGlynn, Graham Frazier, Laura E. R. Barry, Manuel T. Lerdau, Sally E. Pusede, and Gabriel Isaacman-VanWertz
Biogeosciences, 20, 45–55, https://doi.org/10.5194/bg-20-45-2023, https://doi.org/10.5194/bg-20-45-2023, 2023
Short summary
Short summary
Using a custom-made gas chromatography flame ionization detector, 2 years of speciated hourly biogenic volatile organic compound data were collected in a forest in central Virginia. We identify diurnal and seasonal variability in the data, which is shown to impact atmospheric oxidant budgets. A comparison with emission models identified discrepancies with implications for model outcomes. We suggest increased monitoring of speciated biogenic volatile organic compounds to improve modeled results.
Luke D. Schiferl, Jennifer D. Watts, Erik J. L. Larson, Kyle A. Arndt, Sébastien C. Biraud, Eugénie S. Euskirchen, Jordan P. Goodrich, John M. Henderson, Aram Kalhori, Kathryn McKain, Marikate E. Mountain, J. William Munger, Walter C. Oechel, Colm Sweeney, Yonghong Yi, Donatella Zona, and Róisín Commane
Biogeosciences, 19, 5953–5972, https://doi.org/10.5194/bg-19-5953-2022, https://doi.org/10.5194/bg-19-5953-2022, 2022
Short summary
Short summary
As the Arctic rapidly warms, vast stores of thawing permafrost could release carbon dioxide (CO2) into the atmosphere. We combined observations of atmospheric CO2 concentrations from aircraft and a tower with observed CO2 fluxes from tundra ecosystems and found that the Alaskan North Slope in not a consistent source nor sink of CO2. Our study shows the importance of using both site-level and atmospheric measurements to constrain regional net CO2 fluxes and improve biogenic processes in models.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, Richard Kranenburg, and Christian Brümmer
Biogeosciences, 19, 5287–5311, https://doi.org/10.5194/bg-19-5287-2022, https://doi.org/10.5194/bg-19-5287-2022, 2022
Short summary
Short summary
For the first time, we compared four methods for estimating the annual dry deposition of total reactive nitrogen into a low-polluted forest ecosystem. In our analysis, we used 2.5 years of flux measurements, an in situ modeling approach, a large-scale chemical transport model (CTM), and canopy budget models. Annual nitrogen dry deposition budgets ranged between 4.3 and 6.7 kg N ha−1 a−1, depending on the applied method.
Michael Staudt, Juliane Daussy, Joseph Ingabire, and Nafissa Dehimeche
Biogeosciences, 19, 4945–4963, https://doi.org/10.5194/bg-19-4945-2022, https://doi.org/10.5194/bg-19-4945-2022, 2022
Short summary
Short summary
We studied the short- and long-term effects of CO2 as a function of temperature on monoterpene emissions from holm oak. Similarly to isoprene, emissions decreased non-linearly with increasing CO2, with no differences among compounds and chemotypes. The CO2 response was modulated by actual leaf and growth temperature but not by growth CO2. Estimates of annual monoterpene release under double CO2 suggest that CO2 inhibition does not offset the increase in emissions due to expected warming.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
Short summary
Short summary
Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Valery A. Isidorov and Andrej A. Zaitsev
Biogeosciences, 19, 4715–4746, https://doi.org/10.5194/bg-19-4715-2022, https://doi.org/10.5194/bg-19-4715-2022, 2022
Short summary
Short summary
Biogenic volatile organic compounds (VOCs) play a critical role in earth-system processes: they are
main playersin the formation of tropospheric O3 and secondary aerosols, which have a significant impact on climate, human health and crops. A complex mixture of VOCs, formed as a result of physicochemical and biological processes, is released into the atmosphere from the forest floor. This review presents data on the composition of VOCs and contribution of various processes to their emissions.
David S. McLagan, Harald Biester, Tomas Navrátil, Stephan M. Kraemer, and Lorenz Schwab
Biogeosciences, 19, 4415–4429, https://doi.org/10.5194/bg-19-4415-2022, https://doi.org/10.5194/bg-19-4415-2022, 2022
Short summary
Short summary
Spruce and larch trees are effective archiving species for historical atmospheric mercury using growth rings of bole wood. Mercury stable isotope analysis proved an effective tool to characterise industrial mercury signals and assess mercury uptake pathways (leaf uptake for both wood and bark) and mercury cycling within the trees. These data detail important information for understanding the mercury biogeochemical cycle particularly in forest systems.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
Short summary
Short summary
Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
Short summary
Short summary
We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
Short summary
Short summary
The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 19, 3739–3756, https://doi.org/10.5194/bg-19-3739-2022, https://doi.org/10.5194/bg-19-3739-2022, 2022
Short summary
Short summary
A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these net ecosystem exchange (NEE) simulations. Random forests and support vector machines performed better than other algorithms. Models with larger timescales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
Short summary
Short summary
The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
Short summary
Short summary
Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
Short summary
Short summary
This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
Short summary
Short summary
To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
Short summary
Short summary
This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
Short summary
Short summary
The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
Short summary
Short summary
Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Cited articles
Ågren, G. I. and Hyvönen, R.: Changes in carbon stores in Swedish forest soils due to increased biomass harvest and increased temperatures analysed with a semi-empirical model, Forest. Ecol. Manage., 174, 25–37, 2003.
Alm, J., Shurpali, N., Minkkinen, K., Aro, L., Hytönen, J., Laurila, T., Lohila, A., Maljanen, M., Martikainen, P., Mäkiranta, P., Penttila, T., Saarnio, S., Silvan, N., Tuittila, E., and Laine, J.: Emission factors and their uncertainty for the exchange of CO2, CH4 and N2O in Finnish managed peatlands, Boreal. Environ. Res., 12, 191–209, 2007.
Aubinet, M., Feigenwinter, C., Heinesch, B., Bernhofer, C., Canepa, E., Lindroth, A., Montagnani, L., Rebmann, C., Sedlak, P., and Van Gorsel, E.: Direct advection measurements do not help to solve the night-time CO2 closure problem: Evidence from three different forests, Agr. Forest Meteorol., 150, 655–664, 2010.
Baldocchi, D. D.: Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: past, present and future, Glob. Change Biol., 9, 479–492, 2003.
Barford, C. C., Wofsy, S. C., Goulden, M. L., Munger, J. W., Hammond Pyle, E., Urbanski, S. P., Hutyra, L., Saleska, S. R., Fitzjarrald, D., and Moore, K.: Factors controlling long- and short term sequestration of atmospheric CO2 in a mid-latitude forest, Science, 294, 1688–1691, 2001.
Berg, B. and C. McClaugherty (Eds): Plant Litter: Decomposition, Humus Formation, Carbon Sequestration. Springer, 2 Edn., Berlin, Germany, 2008.
Berger, B. W., Davis, K. J., Yi, C., Bakwin, P. S., and Zhao, C.: Long-term carbon dioxide fluxes from a very tall tower in a northern forest: Part I. Flux measurement methodology, J. Atmos. Ocean Tech., 18, 529–542, 2001.
Berglund, O. and Berglund, K.: Distribution and cultivation intensity of agricultural peat and gyttja soils in Sweden and estimation of greenhouse gas emissions from cultivated peat soils, Geoderma, 154, 173–180, 2010.
Black, K. and Gallagher, G.: The greenhouse gas balance of peatland forest, COFORD Connects, Forest. Environ., 11, Dublin, Ireland, 2010.
Brunner, I., Bakker, M., Björk, R., Hirano, Y., Lukac, M., Aranda, X., Børja, I., Eldhuset, T., Helmisaari, H., Jourdan, C., Konopka, B., Lopez, B., Miguel Perez, C., Persson, H., and Ostonen, I.: Fine-root turnover rates of European forests revisited: an analysis of data from sequential coring and ingrowth cores, Plant. Soil, 362, 357–372, 2013.
Chave, J., Condit, R., Aguliar, S., Hernandez, A., Lao, S., and Perez, R.: Error propagation and scaling for tropical forest biomass estimates, Phil. T. R. Soc. Lond. B, 359, 409–420, 2004.
Chen, H., Harmon, M. E., and Griffiths, R. P.: Decomposition and nitrogen release from decomposing woody roots in coniferous forests of the Pacific Northwest: a chronosequence approach, Can. J. Forest Res., 31, 246–260, 2001.
Christiansen, J. R., Korhonen, J. F. J., Juszczak, R., Giebels, M., and Pihlatie, M.: Assessing the effects of chamber placement, manual sampling and headspace mixing on CH4 fluxes in a laboratory experiment, Plant. Soil, 343, 171–185, 2011.
Comstedt, D., Boström, B., and Ekblad, A.: Autotrophic and heterotrophic soil respiration in a Norway spruce forest: estimating the root decomposition and soil moisture effects in a trenching experiment, Biogeochemistry, 104, 121–132, 2011.
Couwenberg, J.: Greenhouse gas emission from managed peat soils: is the IPCC resporting realistic?, Mires. Peat., 8, 1–10, 2011.
Dewar, R. C., Tarvainen, L., Parker, K., Wallin, G., and McMurtrie, R. E.: Why does leaf nitrogen decline within tree canopies less rapidly than light? An explanation from optimization subject to a lower bound on leaf mass per area, Tree Physiol, 32, 520–534, 2012.
Diaz-Pinez, E., Schindlbacher, A., Pfeffer, M., Jandl, R., Zechmeister-Boltenstern, S., and Rubio, A.: Root trenching: a useful tool to estimate autotrophic soil respiration? A case study in an Austrian mountain forest, Eur. J. For. Res., 129, 101–109, 2010.
Dunn, A., Barford, C., Wofsy, S., Goulden, M., and Daube, B.: A long-term record of carbon exchange in a boreal black spruce forest: means, responses to interannual variability, and decadal trends, Glob. Change Biol., 13, 577–590, 2007.
Dyson, K. E., Billett, M. F., Dinsmore, K. J., Harvey, F., Thomson, A. M., Piirainen, S., and Kortelainen, P.: Release of aquatic carbon from two peatland catchments in E. Finland during the spring snowmelt period, Biogeochemistry, 103, 125–142, 2011.
Ernfors, M.: Greenhouse gas fluxes between drained forested peatlands and the atmosphere – influence of nutrient status and wood ash fertilization. PhD thesis, University of Gothenburg, Gothenburg, Sweden, 2009.
Ernfors, M., von Arnold, K., Stendahl, J., Olsson, M., and Klemedtsson, L.: Nitrous oxide emissions from drained organic forest soils – an up-scaling based on C:N ratios, Biogeochemistry, 89, 29–41, 2008.
Ernfors, M., Rütting, T., and Klemedtsson, L.: Increased nitrous oxide emissions from a drained organic forest soil after exclusion of ectomycorrhizal mycelia, Plant. Soil, 343, 161–170, 2011.
Finer, L., Ohashi, M., Noguchi, K., and Hirano, Y.: Fine root production and turnover in forest ecosystems in relation to stand and environmental characteristics, Forest Ecol. Manage., 262, 2008–2023, 2011.
Flanagan, L. B. and Syed, K. H.: Stimulation of both photosynthesis and respiration in response to warmer and drier conditions in a boreal peatland ecosystem, Glob. Change Biol., 17, 2271–2287, 2011.
Forbrich, I., Kutzbach, L., Hormann, A., and Wilmking, M.: A comparison of linear and exponential regression for estimating diffusive CH4 fluxes by closed-chambers in peatlands, Soil. Biol Biochem., 4, 407–415, 2010.
Forster, P., Ramaswamy, V., Artaxo, P., Berntsen, T., Betts, R., Fahey, D., Haywood, J., Lean, J., Lowe, D., Myhre, G., Nganga, J., Prinn, R., Raga, G., Schulz, M., and van Dorland, R.: Changes in Atmospheric Constituents and in Radiative Forcing, In: Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change, edited by: Solomon, S., Qin, D., Manning, M., Chen, Z., Marquis, M., Averyt, K., Tignor, M., and Miller, H., Cambridge University Press, Cambridge, UK, 133–234, 2007.
Gower, S.T., McMurtrie, R. E., and Murty, D.: Aboveground net primary production decline with stand age: potential causes, Trees, 11, 378–382, 1996.
Gough, C. M., Vogel, C. S., Schmid, H. P., Su, H.-B., and Curtis, P. S.: Multi-year convergence of biometric and meteorological estimates of forest carbon storage, Agr. For. Met., 148, 158–170, 2008.
Grelle, A. and Lindroth, A.: Eddy-correlation system for long-term monitoring of fluxes of heat, water vapour and CO2, Glob. Change Biol., 2, 297–307, 1996.
Grelle, A., Lundberg, A., Lindroth, A., Morén, A.-S., and Cienciala, E.: Evaporation components of a boreal forest: Variations during the growing season, J. Hydrol., 197, 70–87, 1997.
Haei, M., Oquist, M. G., Buffam, I., Ågren, A., Blomkvist, P., Bishop, K., Lofvenius, M. O., and Laudon, H.: Cold winter soils enhance dissolved organic carbon concentrations in soil and stream water, Geophys. Res. Lett., 37, L08501, 2010.
Hanson, P. J., Edwards, N. T., Garten, C. T., and Andrews, J. A.: Separating root and soil microbial contributions to soil respiration: A review of methods and observations, Biogeochemistry, 48, 115–146, 2000.
Hargreaves, K., Milne, R., and Cannell, M.: Carbon balance of afforested peatland in Scotland, Forestry, 76, 299–317, 2003.
He, L., Chen, J. M., Pan, Y., Birdsey, R., and Kattge, J.: Relationships between net primary productivity and forest stand age in U.S. forests, Glob. Biogeochem. Cycles, 26, GB3009, 2012.
Höper, H.: Carbon and nitrogen mineralization rates in German agriculturally used fenlands, in: Wetlands in Central Europe: Soil organisms, soil ecological processes and trace gas emissions, edited by: Broll, G., Merbach, W. and Pfeiffer, E. M., Springer, Berlin, Germany, 149–164, 2002.
Huttunen, J., Nykanen, H., Martikainen, P., and Nieminen, M.: Fluxes of nitrous oxide and methane from drained peatlands following forest clear-felling in southern Finland, Plant. Soil, 255, 457–462, 2003.
Jalkanen, A., Mäkipää, G., Ståhl, G., Lehtonen, A., and Petersson, H.: Estimation of the biomass stock of trees in Sweden: comparison of biomass equations and age-dependent biomass expansion factors, Ann. For. Sci., 62, 845–851, 2005.
Jenkins, J. C., Chojnacky, D. C., Heath, L. S., and Birdsey, R. A.: National-scale biomass estimators for United States tree species, Forest Sci., 49, 12–35, 2003.
Jungkunst, H. F. and Fiedler, S.: Latitudinal differentiated water table control of carbon dioxide, methane and nitrous oxide fluxes from hydromorphic soil: feedbacks to climate change, Glob. Change Biol., 13, 2668–2683, 2007.
Kaimal, J. C., Wyngaard, J. C., Izumi, Y., and Coté, O. R.: Spectral Characteristics of Surface-Layer Turbulence, Q. J. Roy. Meteor. Soc., 98, 563–589, 1972.
Kasimir-Klemedtsson, Å., Klemedtsson, L., Berglund, K., Martikainen, P., Silvola, J., and Oenema, O.: Greenhouse gas emissions from farmed organic soils: a review, Soil Use. Manage., 13, 245–250, 1997.
Kasimir Klemedtsson, Å., Weslien, P., and Klemedtsson, L.: Methane and nitrous oxide fluxes from a farmed Swedish Histosol, Eur. J. Soil Sci., 60, 321–331, 2009.
Klemedtsson, L., von Arnold, K., Weslien, P., and Gundersen, P.: Soil CN ratio as a scalar parameter to predict nitrous oxide emissions, Glob. Change Biol., 11, 1142–1147, 2005.
Klemedtsson, L., Ernfors, M., Björk, R., Weslien, P., Rütting, T., Crill, P., and Sikström, U.: Reduction of greenhouse gas emissions by wood ash application to a Picea abies (L.) Karst. forest on a drained organic soil, Eur. J. Soil Sci., 61, 734–744, 2010.
Köhler, S. J., Buffam, I., Laudon, H., and Bishop, K. H.: Climates control of intra-annual and interannual variability of total organic carbon concentration and flux in two contrasting boreal landscape elements, J. Geophys. Res.-Biogeo., 113, G03012, 2008.
Kuzyakov, Y.: Review: Factors affecting rhizosphere priming effects, J. Plant. Nutr. Soil. Sc., 165, 382–396, 2002.
Laiho, R. and Finer, L.: Changes in root biomass after water-level drawdown on pine mires in southern Finland, Scand J. Forest. Res., 11, 251–260, 1996.
Laudon, H., Köhler, S. and Buffam, I.: Seasonal TOC export from seven boreal catchments in northern Sweden, Aquat Sci, 66, 223–230, 2004.
Levy, P. E., Gray, A., Leeson, S. R., Gaiawyn, J., Kelly, M. P. C., Cooper, M. D. A., Dinsmore, K. J., Jones, S. K., and Sheppard, L. J.: Quantification of uncertainty in trace gas fluxes measured by the static chamber method, Eur. J. Soil Sci., 62, 811–821, 2011.
Lindroth, A., Klemedtsson, L., Grelle, A., Weslien, P., and Langvall, O.: Measurement of net ecosystem exchange, productivity and respiration in three spruce forests in Sweden shows unexpectedly large soil carbon losses, Biogeochemistry, 89, 43–60, 2008.
Livingston, G. P. and Hutchingson, G. L.: Enclosure-based measurement of trace gas exchange: application and sources of error, in: Methods in Ecology-Biogenic Trace Gases: Measuring Emissions from Soil and Water, edited by: Matson, P. A. and Harriss, R. C., Blackwell, London, U.K., 14–51, 1995.
Lohila, A., Laurila, T., Aro, L., Aurela, M., Tuovinen, J. P., Laine, J., Kolari, P., and Minkkinen, K.: Carbon dioxide exchange above a 30-year-old Scots pine plantation established on organic-soil cropland, Boreal Environ. Res., 12, 141–157, 2007.
Lohila, A., Minkkinen, K., Aurela, M., Tuovinen, J. P., Penttila, T., Ojanen, P., and Laurila, T.: Greenhouse gas flux measurements in a forestry-drained peatland indicate a large carbon sink, Biogeosciences, 8, 3203–3218, 2011.
Maljanen, M., Liikanen, A., Silvola, J., and Martikainen, P.: Methane fluxes on agricultural and forested boreal organic soils, Soil. Use Manage., 19, 73–79, 2003a.
Maljanen, M., Liikanen, A., Silvola, J., and Martikainen, P.: Nitrous oxide emissions from boreal organic soil under different land-use, Soil Biol. Biochem., 35, 689–700, 2003b.
Maljanen, M., Komulainen, V. M., Hytönen, J., Martikainen, P., and Laine, J.: Carbon dioxide, nitrous oxide and methane dynamics in boreal organic agricultural soils with different soil characteristics, Soil. Biol Biochem., 36, 1801–1808, 2004.
Maljanen, M., Hytönen, J., Mäkiranta, P., Alm, J., Minkkinen, K., Laine, J., and Martikainen, P. J.: Greenhouse gas emissions from cultivated and abandoned organic croplands in Finland, Boreal Environ. Res., 12, 133–140, 2007.
Maljanen, M., Sigurdsson, B., Guomundsson, J., Oskarsson, H., Huttunen, J., and Martikainen, P.: Greenhouse gas balances of managed peatlands in the Nordic countries – present knowledge and gaps, Biogeosciences, 7, 2711–2738, 2010.
Marklund, L.: Biomassfunktioner för tall, gran och björk i Sverige, Rapporter Skog, 45, Sveriges Lantbruksuniversitet, Sweden, 1–73, 1988.
Martikainen, P., Nykänen, H., Crill, P., and Silvola, J.: Effect of a lowered water-table on nitrous-oxide Fluxes from Northern peatlands, Nature, 366, 51–53, 1993.
McRoberts, R. E., Hahn, J. T., Hefty, G. J., and Van Cleve, J. R.: Variation in forest inventory field measurements, Can. J. For. Res., 24, 1766–1770, 1994.
Mehtätalo, L.: A longitudinal height-diameter model for Norway spruce in Finland, Can. J. For. Res., 34, 131–140, 2004.
Melson, S. L., Harmon, M. E., Fried, J. S., and Domingo, J. B.: Estimates of live-tree carbon stores in the Pacific Northwest are sensitive to model selection, Carbon Balance Manage, 6, 2–16, 2011.
Minkkinen, K. and Laine, J.: Vegetation heterogeneity and ditches create spatial variability in methane fluxes from peatlands drained for forestry, Plant. Soil, 285, 289–304, 2006.
Minkkinen, K., Vasander, H., Jauhiainen, S., Karsisto, M., and Laine, J.: Post-drainage changes in vegetation composition and carbon balance in Lakkasuo mire, Central Finland, Plant. Soil, 207, 107–120, 1999.
Minkkinen, K., Laine, J., and Hokka, H.: Tree stand development and carbon sequestration in drained peatland stands in Finland – a simulation study, Silva Fenn, 35, 55–69, 2001.
Minkkinen, K., Korhonen, R., Savolainen, I., and Laine, J.: Carbon balance and radiative forcing of Finnish peatlands 1900–2100 – the impact of forestry drainage, Glob Change Biol, 8, 785–799, 2002.
Mäkiranta, P., Hytönen, J., Aro, L., Maljanen, M., Pihlatie, M., Potila, H., Shurpali, N., Laine, J., Lohila, A., Martikainen, P., and Minkkinen, K.: Soil greenhouse gas emissions from afforested organic soil croplands and cutaway peatlands, Boreal Environ. Res., 12, 159–175, 2007.
Mäkiranta, P., Minkkinen K., Hytönen, J., and Laine, J.: Factors causing temporal and spatial variation in heterotrophic and rhizospheric components of soil respiration in afforested organic croplands in Finland, Soil Biol. Biochem., 40, 1592–1600, 2008.
Mäkiranta, P., Riutta, T., Penttila, T., and Minkkinen, K.: Dynamics of net ecosystem CO2 exchange and heterotrophic soil respiration following clearfelling in a drained peatland forest, Agr. For. Meteorol., 150, 1585–1596, 2010.
Mäkiranta, P., Laiho, R., Penttilä, T., and Minkkinen, K.: The impact of logging residue on soil GHG fluxes in a drained peatland forest, Soil Biol. Biochem., 48, 1–9, 2012.
Moffat, A. M., Papale, D., Reichstein, M., Hollinger, D. Y., Richardson, A. D., Barr, A. G., Beckstein, C., Braswel, B. H., Churkina, G., Desai, A. R., Falge, E., Gove, J. H., Heimann, M., Hui, D., Jarvis, A. J., Kattge, J., Noormets, A., and Stauch, V. J.: Comprehensive comparison of gap-filling techniques for eddy covariance net carbon fluxes, Agr. For. Meteorol., 147, 209–232, 2007.
Ngao, J., Longdoz, B., Granier, A., and Epron, D.: Estimation of autotrophic and heterotrophic components of soil respiration by trenching is sensitive to corrections for root decomposition and changes in soil water content, Plant Soil., 301, 99–110, 2007.
Nilsson, M., Sagerfors, J., Buffam, I., Laudon, H., Eriksson, T., Grelle, A., Klemedtsson, L., Weslien, P., and Lindroth, A.: Contemporary carbon accumulation in a boreal oligotrophic minerogenic mire – a significant sink after accounting for all C-fluxes, Glob. Change Biol., 14, 2317–2332, 2008.
Nykänen, H., Alm, J., Silvola, J., Tolonen, K., and Martikainen, P.: Methane fluxes on boreal peatlands of different fertility and the effect of long-term experimental lowering of the water table on flux rates, Global Biogeochem. Cy., 12, 53–69, 1998.
Ojanen, P., Minkkinen, K., Alm, J., and Penttila, T.: Soil-atmosphere CO2, CH4 and N2O fluxes in boreal forestry-drained peatlands, Forest Ecol. Manage., 260, 411–421, 2010.
Ojanen, P., Minkkinen, K., Lohila, A., Badorek, T., and Penttila, T.: Chamber measured soil respiration: A useful tool for estimating the carbon balance of peatland forest soils?, Forest Ecol. Manage., 277, 132–140, 2012.
Öquist, M. G., Wallin, M., Seibert, J., Bishop, K., and Laudon, H.: Dissolved inorganic carbn export across soil / stream interface and its fate in a boreal headwater streams, Environ. Sci. Technol., 43, 7364–7369, 2009.
Pihlatie, M., Kiese, R., Brüggemann, N., Butterbach-Bahl, K., Kieloaho, A., Laurila, T., Lohila, A., Mammarella, I., Minkkinen, K., Penttila, T., Schönborn, J., and Vesala, T.: Greenhouse gas fluxes in a drained peatland forest during spring frost-thaw event, Biogeosciences, 7, 1715–1727, 2010.
Pumpanen, J., Kolari, P., Ilvesniemi, H., Minkkinen, K., Vesala, T., Niinistö, S., Lohila, A., Larmola, T., Morero, M., Pihlatie, M., Janssens, I., Yuste, J. C., Grünzweig, J. M., Reth, S., Subke, J. A., Savage, K., Kutsch, W., Østreng, G., Ziegler, W., Anthoni, P., Lindroth, A., and Hari, P.: Comparison of different chamber techniques for measuring soil CO2 efflux, Agr. For. Meteorol., 123, 159–176, 2004.
Rantakari, M., Mattsson, T., Kortelainen, P., Piirainen, S., Finer, L., and Ahtiainen, M.: Organic and inorganic carbon concentrations and fluxes from managed and unmanaged boreal first-order catchments, Sci. Total Environ., 408, 1649–1658, 2010.
Schlesinger, W. H. and Andrews, J. A.: Soil respiration and the global carbon cycle, Biogeochemistry, 48, 7–20, 2000.
Schmid, H. P.: Source areas for scalars and scalar fluxes, Bound-Lay Meteorol 67, 293–318, 1994.
Schmid, H. P.: Footprint modeling for vegetation atmosphere exchange studies: a review and perspective, Agr. For. Meteorol., 113, 159–183, 2002.
Subke, J.-A., Inglima, I., and Cotrufo, F.: Trends and methodological impacts in soil CO2 efflux partitioning: a metaanalytical review, Glob. Change Biol., 12, 921–943, 2006.
Vickers, D., Irvine, J., Martin, J. G., and Law, B. E.: Nocturnal subcanopy flow regimes and missing carbon dioxide, Agr. For. Meteorol., 152, 101–108, 2012.
von Arnold, K.: Forests and Greenhouse gases – Fluxes of CO2, CH4 and N2O from drained forests on organic soils, PhD thesis, Linköping Studies in Arts and Science, 302, Linköping University, Sweden, 2004.
von Arnold, K., Hånell, B., Stendahl, J., and Klemedtsson, L.: Greenhouse gas fluxes from drained organic forestland in Sweden, Scand J. For. Res., 20, 400–411, 2005a.
von Arnold, K., Weslien, P., Nilsson, M., Svensson, B. and Klemedtsson, L.: Fluxes of CO2, CH4 and N2O from drained coniferous forests on organic soils, Forest Ecol Manag, 210, 239–254, 2005b.
Wallander, H., Ekblad, A., Godbold, D., Johnson, D., Bahr, A., Baldrian, P., Björk, R., Kieliszewska-Rokicka, B., Kjøller, R., Kraigher, H., Plassard, C., and Rudawska, M.: Evaluation of methods to estimate production, biomass and turnover of ectomycorrhizal mycelium in forests soils – A review, Soil Biol. Biochem., 57, 1034–1047, 2013.
Wallin, G., Linder, S., Lindroth, A., Rantfors, M., Flemberg, S., and Grelle, A.: Carbon dioxide exchange in Norway spruce at the shoot, tree and ecosystem scale, Tree Physiol., 21, 969–976, 2001.
Wallin, M., Buffam, I., Öquist, M., Laudon, H., and Bishop, K.: Temporal and spatial variability of dissolved inorganic carbon in a boreal stream network: concentrations and downstream fluxes, J. Geophys. Res., 115, G02014, 2010.
Wang, J. M., Murphy, J. G., Geddes, J. A., Winsborough, C. L., Basiliko, N., and Thomas, S. C.: Methane fluxes measured by eddy covariance and static chamber techniques at a temperate forest in central Ontario, Canada, Biogeosciences, 10, 4371–4382, 2013.
Watson, R. T., Noble, I. R., Bolin, B., Ravidranath, N. H., Verardo, D. J., and Dokken, D. J.: Land use, land use change, and forestry. A special report of the IPCC, Cambridge University Press, Cambridge, U.K., 2000.
Webb, E. K., Pearman, G. I., and Leuning, R.: Correction of flux measurements for density effects due to heat and water vapour transfer, Q. J. Roy. Meterol. Soc., 106, 85–100, 1980.
Wesely, M. L. and Hart, R. L.: Variability of short term eddy-correlation estimates of mass exchange, in: The Forest-Atmosphere Interaction, Proceedings of the Forest Environmental Measurements Conference held at Oak Ridge, Reidel Publishing Company, Dordrecht, The Netherlands, 591–612, 1985.
White, M. A., Thornton, P. E., Running, S. W., and Nemani, R. R.: Parameterization and sensitivity analysis of the BIOME-BGC terrestrial ecosystem model: net primary production controls, Earth Interact, 4, 1–85, 2000.
Wilson, K., Goldstein, A., Falge, E., Aubinet, M., Baldocchi, D., Berbiger, P., Bernhofer, C., Ceulemans, R., Dolman, H., Field, C., Grelle, A., Ibrom, A., Law, B. E., Kowalski, A., Meyers, T., Moncrieff, J., Monson, R., Oechel, W., Tenhunen, J., Valentini, R., and Vema, S.: Energy balance closure at FLUXNET sites, Agr. For. Met., 113, 223–243, 2002.
Yamulki, S., Anderson, R., Peace, A., and Morison, J.: Soil CO2, CH4, and N2O fluxes from an afforested lowland raised peatbog in Scotland: implications for drainage and restoration, Biogeosciences, 10, 1051–1065, 2013.
