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Short summary
From seasonal in situ observations on how a Mediterranean ecosystem responds to drought, a specific isoprene emission (ER, emission rates) algorithm was developed, upon which 2100 projections (IPCC RCP2.6 and RCP8.5 scenarios) were made. Emission rates were found to be mainly sensitive to future temperature changes and poorly represented by current empirical emission models. Drought was found to aggravate thermal stress on emission rates.
From seasonal in situ observations on how a Mediterranean ecosystem responds to drought, a...
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BG | Articles | Volume 15, issue 15
Biogeosciences, 15, 4711–4730, 2018
https://doi.org/10.5194/bg-15-4711-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Biogeosciences, 15, 4711–4730, 2018
https://doi.org/10.5194/bg-15-4711-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article 03 Aug 2018
Research article | 03 Aug 2018
Seasonal variations of Quercus pubescens isoprene emissions from an in natura forest under drought stress and sensitivity to future climate change in the Mediterranean area
Anne-Cyrielle Genard-Zielinski et al.
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Benjamin Loubet, Pauline Buysse, Lais Gonzaga-Gomez, Florence Lafouge, Raluca Ciuraru, Céline Decuq, Julien Kammer, Sandy Bsaibes, Christophe Boissard, Brigitte Durand, Jean-Christophe Gueudet, Olivier Fanucci, Olivier Zurfluh, Letizia Abis, Nora Zannoni, François Truong, Dominique Baisnée, Roland Sarda-Estève, Michael Staudt, and Valérie Gros
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2020-1328, https://doi.org/10.5194/acp-2020-1328, 2021
Preprint under review for ACP
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Volatile organic compounds (VOC) are precursors of tropospheric pollutants like ozone or aerosols. Emission by agricultural land was still poorly characterised. We report experimental measurements of VOC fluxes above a wheat field with a highly sensitive proton transfer mass spectrometer. We confirm that methanol is the most emitted VOC by wheat. A VOC not reported previously as emitted by crops was the second most emitted here (ion m/z 93.037). Around 70 % of the VOC measured were depositing.
Elisa Bruni, Bertrand Guenet, Yuanyuan Huang, Hugues Clivot, Iñigo Virto, Roberta Farina, Thomas Kätterer, Philippe Ciais, Manuel Martin, and Claire Chenu
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-489, https://doi.org/10.5194/bg-2020-489, 2021
Preprint under review for BG
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Increasing soil organic carbon (SOC) stocks is beneficial for climate change mitigation and food security. One way to enhance SOC stocks is to increase carbon inputs to the soil. We estimated the amount of carbon inputs required to reach a 4 ‰ annual increase of SOC stocks in 14 long-term agricultural experiments around Europe. We found that annual carbon inputs should increase by 43 % under current temperature conditions, by 54 % for a 1 °C warming scenario and by 120 % for a 5 °C warming scenario.
Benjamin Chazeau, Brice Temime-Roussel, Grégory Gille, Boualem Mesbah, Barbara D'Anna, Henri Wortham, and Nicolas Marchand
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2020-1015, https://doi.org/10.5194/acp-2020-1015, 2020
Preprint under review for ACP
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The temporal trends in the chemical composition and particle number of the submicron aerosols in a Mediterranean city, Marseille, are investigated over 14 months. Fifteen days were found to exceed the WHO PM2.5 daily limit (25 µg m−3) only during the cold period, with two distinct origins: local pollution events with an increased fraction of the carbonaceous fraction due to domestic wood burning and long-range pollution events with high level of oxygenated organic aerosol and ammonium nitrate.
Juan Miguel González-Sánchez, Nicolas Brun, Junteng Wu, Julien Morin, Brice Temime-Rousell, Sylvain Ravier, Camille Mouchel-Vallon, Jean-Louis Clément, and Anne Monod
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2020-684, https://doi.org/10.5194/acp-2020-684, 2020
Revised manuscript under review for ACP
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Organic nitrates play a crucial role on air pollution as they are considered as NOx reservoirs. This work lights up the importance of their reactions with OH radicals in the aqueous-phase (cloud/fog, wet aerosol), which is slower than in the gas-phase. For compounds that significantly partition in water such as polyfunctional biogenic nitrates, these aqueous-phase reactions should drive their atmospheric removal, leading to a broader spatial distribution of NOx than previously accounted for.
Eve-Agnès Fiorentino, Henri Wortham, and Karine Sartelet
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2020-300, https://doi.org/10.5194/gmd-2020-300, 2020
Preprint under review for GMD
Evangelia Kostenidou, Alvaro Martinez-Valiente, Badr R'Mili, Baptiste Marques, Brice Temime-Roussel, Michel André, Yao Liu, Cédric Louis, Boris Vansevenant, Daniel Ferry, Carine Laffon, Philippe Parent, and Barbara D'Anna
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2020-842, https://doi.org/10.5194/acp-2020-842, 2020
Preprint under review for ACP
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Passenger vehicles' emissions can be a significant source of particulate matter in urban areas. In this study the particle phase emissions of seven Euro 5 passenger cars were characterized. Changes in engine technologies and after-treatment devices can alter the chemical composition and the size of the emitted particulate matter. The condition of the Diesel Particle Filter (DPF) plays an important role on the emitted pollutants.
James Brean, David C. S. Beddows, Zongbo Shi, Brice Temime-Roussel, Nicolas Marchand, Xavier Querol, Andrés Alastuey, María Cruz Minguillón, and Roy M. Harrison
Atmos. Chem. Phys., 20, 10029–10045, https://doi.org/10.5194/acp-20-10029-2020, https://doi.org/10.5194/acp-20-10029-2020, 2020
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New particle formation is a key process influencing both local air quality and climatically active cloud condensation nuclei concentrations. This study has carried out fundamental measurements of nucleation processes in Barcelona, Spain, and concludes that a mechanism involving stabilisation of sulfuric acid clusters by low molecular weight amines is primarily responsible for new particle formation events.
Yan Sun, Daniel S. Goll, Jinfeng Chang, Philippe Ciais, Betrand Guenet, Julian Helfenstein, Yuanyuan Huang, Ronny Lauerwald, Fabienne Maignan, Victoria Naipal, Yilong Wang, Hui Yang, and Haicheng Zhang
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2020-93, https://doi.org/10.5194/gmd-2020-93, 2020
Revised manuscript under review for GMD
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We evaluated the performance of nutrient enabled version land surface model ORCHIDEE-CNP v 1.2 against remote-sensing, ground-based measurement networks and ecological databases. We find that the simulated carbon, nitrogen and phosphorus fluxes among different spatial scales are generally in good agreement with data-driven estimates. However, the recent carbon sink in the Northern Hemisphere is substantially underestimated. Potential causes, as well as model development priorities are discussed.
Eve-Agnès Fiorentino, Henri Wortham, and Karine Sartelet
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2020-192, https://doi.org/10.5194/gmd-2020-192, 2020
Preprint withdrawn
Victoria Naipal, Ronny Lauerwald, Philippe Ciais, Bertrand Guenet, and Yilong Wang
Geosci. Model Dev., 13, 1201–1222, https://doi.org/10.5194/gmd-13-1201-2020, https://doi.org/10.5194/gmd-13-1201-2020, 2020
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In this study we present the Carbon Erosion DYNAMics model (CE-DYNAM) that links sediment dynamics resulting from water erosion with the soil carbon cycle along a cascade of hillslopes, floodplains, and rivers. The model can simulate the removal of soil and carbon from eroding areas and their destination at regional scale. We calibrated and validated the model for the Rhine catchment, and we show that soil erosion is a potential large net carbon sink over the period 1850–2005.
Simon P. K. Bowring, Ronny Lauerwald, Bertrand Guenet, Dan Zhu, Matthieu Guimberteau, Pierre Regnier, Ardalan Tootchi, Agnès Ducharne, and Philippe Ciais
Geosci. Model Dev., 13, 507–520, https://doi.org/10.5194/gmd-13-507-2020, https://doi.org/10.5194/gmd-13-507-2020, 2020
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In this second part of the study, we performed simulations of the carbon and water budget of the Lena catchment with the land surface model ORCHIDEE MICT-LEAK, enabled to simulate dissolved organic carbon (DOC) production in soils and its transport and fate in high-latitude inland waters. We compare simulations using this model to existing data sources to show that it is capable of reproducing dissolved carbon fluxes of potentially great importance for the future of the global permafrost.
Nicolas Vuichard, Palmira Messina, Sebastiaan Luyssaert, Bertrand Guenet, Sönke Zaehle, Josefine Ghattas, Vladislav Bastrikov, and Philippe Peylin
Geosci. Model Dev., 12, 4751–4779, https://doi.org/10.5194/gmd-12-4751-2019, https://doi.org/10.5194/gmd-12-4751-2019, 2019
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In this research, we present a new version of the global terrestrial ecosystem model ORCHIDEE in which carbon and nitrogen cycles are coupled. We evaluate its skills at simulating primary production at 78 sites and at a global scale. Based on a set of additional simulations in which carbon and nitrogen cycles are coupled and uncoupled, we show that the functional responses of the model with carbon–nitrogen interactions better agree with our current understanding of photosynthesis.
Simon P. K. Bowring, Ronny Lauerwald, Bertrand Guenet, Dan Zhu, Matthieu Guimberteau, Ardalan Tootchi, Agnès Ducharne, and Philippe Ciais
Geosci. Model Dev., 12, 3503–3521, https://doi.org/10.5194/gmd-12-3503-2019, https://doi.org/10.5194/gmd-12-3503-2019, 2019
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Few Earth system models represent permafrost soil biogeochemistry, contributing to uncertainty in estimating its response and that of the planet to warming. Because the permafrost contains over double the carbon in the present atmosphere, its fate as it is
unlockedby warming is globally significant. One way it can be mobilised is into rivers, the sea, or the atmosphere: a vector previously ignored in climate modelling. We present a model scheme for resolving this vector at a global scale.
Chunjing Qiu, Dan Zhu, Philippe Ciais, Bertrand Guenet, Shushi Peng, Gerhard Krinner, Ardalan Tootchi, Agnès Ducharne, and Adam Hastie
Geosci. Model Dev., 12, 2961–2982, https://doi.org/10.5194/gmd-12-2961-2019, https://doi.org/10.5194/gmd-12-2961-2019, 2019
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We present a model that can simulate the dynamics of peatland area extent and the vertical buildup of peat. The model is validated across a range of northern peatland sites and over the Northern Hemisphere (> 30° N). It is able to reproduce the spatial extent of northern peatlands and peat carbon accumulation over the Holocene.
Raia Silvia Massad, Juliette Lathière, Susanna Strada, Mathieu Perrin, Erwan Personne, Marc Stéfanon, Patrick Stella, Sophie Szopa, and Nathalie de Noblet-Ducoudré
Biogeosciences, 16, 2369–2408, https://doi.org/10.5194/bg-16-2369-2019, https://doi.org/10.5194/bg-16-2369-2019, 2019
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Human activities strongly interfere in the land–atmosphere interactions through changes in land use and land cover changes and land management. The objectives of this review are to synthesize the existing experimental and modelling works that investigate physical, chemical, and biogeochemical interactions between land surface and the atmosphere. Greater consideration of atmospheric chemistry, through land–atmosphere interactions, as a decision parameter for land management is essential.
Haicheng Zhang, Daniel S. Goll, Stefano Manzoni, Philippe Ciais, Bertrand Guenet, and Yuanyuan Huang
Geosci. Model Dev., 11, 4779–4796, https://doi.org/10.5194/gmd-11-4779-2018, https://doi.org/10.5194/gmd-11-4779-2018, 2018
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Carbon use efficiency (CUE) of decomposers depends strongly on the organic matter quality (C : N ratio) and soil nutrient availability rather than a fixed value. A soil biogeochemical model with flexible CUE can better capture the differences in respiration rate of litter with contrasting C : N ratios and under different levels of mineral N availability than the model with fixed CUE, and well represent the effect of varying litter quality (N content) on SOM formation across temporal scales.
Marwa Tifafi, Marta Camino-Serrano, Christine Hatté, Hector Morras, Lucas Moretti, Sebastián Barbaro, Sophie Cornu, and Bertrand Guenet
Geosci. Model Dev., 11, 4711–4726, https://doi.org/10.5194/gmd-11-4711-2018, https://doi.org/10.5194/gmd-11-4711-2018, 2018
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The role of soil carbon in climate dynamics becomes one of the major uncertainties in land surface models. This work is a presentation of a new version of the land surface model called ORCHIDEE incorporating the radiocarbon (14C) used as integrator of the soil carbon dynamics. It has been possible to highlight an underestimation of the age of carbon in the soil and that model improvements should focus more on a depth-dependent parameterization mainly for the diffusion.
Cristina Carnerero, Noemí Pérez, Cristina Reche, Marina Ealo, Gloria Titos, Hong-Ku Lee, Hee-Ram Eun, Yong-Hee Park, Lubna Dada, Pauli Paasonen, Veli-Matti Kerminen, Enrique Mantilla, Miguel Escudero, Francisco J. Gómez-Moreno, Elisabeth Alonso-Blanco, Esther Coz, Alfonso Saiz-Lopez, Brice Temime-Roussel, Nicolas Marchand, David C. S. Beddows, Roy M. Harrison, Tuukka Petäjä, Markku Kulmala, Kang-Ho Ahn, Andrés Alastuey, and Xavier Querol
Atmos. Chem. Phys., 18, 16601–16618, https://doi.org/10.5194/acp-18-16601-2018, https://doi.org/10.5194/acp-18-16601-2018, 2018
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The vertical distribution of new particle formation events was studied using tethered balloons carrying miniaturized instrumentation. Results show that new particle formation and growth occurs only in the lower layer of the atmosphere, where aerosols are mixed due to convection, especially when the atmosphere is clean. A comparison of urban and suburban surface stations was also made, suggesting that such events may have a significant impact on ultrafine particle concentrations in a wide area.
Amelie Bertrand, Giulia Stefenelli, Simone M. Pieber, Emily A. Bruns, Brice Temime-Roussel, Jay G. Slowik, Henri Wortham, André S. H. Prévôt, Imad El Haddad, and Nicolas Marchand
Atmos. Chem. Phys., 18, 10915–10930, https://doi.org/10.5194/acp-18-10915-2018, https://doi.org/10.5194/acp-18-10915-2018, 2018
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We model the evolution of several BBOA markers including levoglucosan during aging experiments conducted in an atmospheric Teflon chamber, in order to evaluate the influence of vapor wall loss on the determination of the rate constants of the compounds with hydroxyl radicals (OH).
Victoria Naipal, Philippe Ciais, Yilong Wang, Ronny Lauerwald, Bertrand Guenet, and Kristof Van Oost
Biogeosciences, 15, 4459–4480, https://doi.org/10.5194/bg-15-4459-2018, https://doi.org/10.5194/bg-15-4459-2018, 2018
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We seek to better understand the links between soil erosion by rainfall and the global carbon (C) cycle by coupling a soil erosion model to the C cycle of a land surface model. With this modeling approach we evaluate the effects of soil removal on soil C stocks in the presence of climate change and land use change. We find that accelerated soil erosion leads to a potential SOC removal flux of 74 ±18 Pg of C globally over the period AD 1850–2005, with significant impacts on the land C balance.
Ye Huang, Bertrand Guenet, Philippe Ciais, Ivan A. Janssens, Jennifer L. Soong, Yilong Wang, Daniel Goll, Evgenia Blagodatskaya, and Yuanyuan Huang
Geosci. Model Dev., 11, 2111–2138, https://doi.org/10.5194/gmd-11-2111-2018, https://doi.org/10.5194/gmd-11-2111-2018, 2018
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ORCHIMIC is a modeling effort trying to improve the representation of SOC dynamics in Earth system models (ESM). It has a structure that can be easily incorporated into CENTURY-based ESMs. In ORCHIMIC, key microbial dynamics (i.e., enzyme production, enzymatic decomposition and microbial dormancy) are included. The ORCHIMIC model can also reproduce the observed temporal dynamics of respiration and priming effects; thus it is an improved tool for climate projections and SOC response predictions.
Amelie Bertrand, Giulia Stefenelli, Coty N. Jen, Simone M. Pieber, Emily A. Bruns, Haiyan Ni, Brice Temime-Roussel, Jay G. Slowik, Allen H. Goldstein, Imad El Haddad, Urs Baltensperger, André S. H. Prévôt, Henri Wortham, and Nicolas Marchand
Atmos. Chem. Phys., 18, 7607–7624, https://doi.org/10.5194/acp-18-7607-2018, https://doi.org/10.5194/acp-18-7607-2018, 2018
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A thermal desorption aerosol gas chromatograph coupled to an aerosol mass spectrometer (TAG–AMS) is connected to an atmospheric chamber. The setup serves the quantitative study of the impact of combustion conditions and atmospheric aging on the chemical fingerprint at the molecular level of biomass burning organic aerosol.
Xavier Querol, Andrés Alastuey, Gotzon Gangoiti, Noemí Perez, Hong K. Lee, Heeram R. Eun, Yonghee Park, Enrique Mantilla, Miguel Escudero, Gloria Titos, Lucio Alonso, Brice Temime-Roussel, Nicolas Marchand, Juan R. Moreta, M. Arantxa Revuelta, Pedro Salvador, Begoña Artíñano, Saúl García dos Santos, Mónica Anguas, Alberto Notario, Alfonso Saiz-Lopez, Roy M. Harrison, Millán Millán, and Kang-Ho Ahn
Atmos. Chem. Phys., 18, 6511–6533, https://doi.org/10.5194/acp-18-6511-2018, https://doi.org/10.5194/acp-18-6511-2018, 2018
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We show the main drivers of high O3 episodes in and around Madrid. High levels of ultrafine particles (UFPs) are evidenced, but we demonstrate that most O3 arises from the fumigation of high atmospheric layers, whereas UFPs are generated inside the PBL. O3 contributions from the fumigation of the vertical recirculation of regional air masses, hemispheric transport, and horizontally from direct urban plume transport are shown. Complexity arises from the need to quantify them to abate surface O3.
Marta Camino-Serrano, Bertrand Guenet, Sebastiaan Luyssaert, Philippe Ciais, Vladislav Bastrikov, Bruno De Vos, Bert Gielen, Gerd Gleixner, Albert Jornet-Puig, Klaus Kaiser, Dolly Kothawala, Ronny Lauerwald, Josep Peñuelas, Marion Schrumpf, Sara Vicca, Nicolas Vuichard, David Walmsley, and Ivan A. Janssens
Geosci. Model Dev., 11, 937–957, https://doi.org/10.5194/gmd-11-937-2018, https://doi.org/10.5194/gmd-11-937-2018, 2018
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Global models generally oversimplify the representation of soil organic carbon (SOC), and thus its response to global warming remains uncertain. We present the new soil module ORCHIDEE-SOM, within the global model ORCHIDEE, that refines the representation of SOC dynamics and includes the dissolved organic carbon (DOC) processes. The model is able to reproduce SOC stocks and DOC concentrations in four different ecosystems, opening an opportunity for improved predictions of SOC in global models.
Mahdi Nakhavali, Pierre Friedlingstein, Ronny Lauerwald, Jing Tang, Sarah Chadburn, Marta Camino-Serrano, Bertrand Guenet, Anna Harper, David Walmsley, Matthias Peichl, and Bert Gielen
Geosci. Model Dev., 11, 593–609, https://doi.org/10.5194/gmd-11-593-2018, https://doi.org/10.5194/gmd-11-593-2018, 2018
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In order to provide a better understanding of the Earth's carbon cycle, we need a model that represents the whole continuum from atmosphere to land and into the ocean. In this study we include in JULES a representation of dissolved organic carbon (DOC) processes. Our results show that the model is able to reproduce the DOC concentration and controlling processes, including leaching to the riverine system, which is fundamental for integrating the terrestrial and aquatic ecosystem.
Chunjing Qiu, Dan Zhu, Philippe Ciais, Bertrand Guenet, Gerhard Krinner, Shushi Peng, Mika Aurela, Christian Bernhofer, Christian Brümmer, Syndonia Bret-Harte, Housen Chu, Jiquan Chen, Ankur R. Desai, Jiří Dušek, Eugénie S. Euskirchen, Krzysztof Fortuniak, Lawrence B. Flanagan, Thomas Friborg, Mateusz Grygoruk, Sébastien Gogo, Thomas Grünwald, Birger U. Hansen, David Holl, Elyn Humphreys, Miriam Hurkuck, Gerard Kiely, Janina Klatt, Lars Kutzbach, Chloé Largeron, Fatima Laggoun-Défarge, Magnus Lund, Peter M. Lafleur, Xuefei Li, Ivan Mammarella, Lutz Merbold, Mats B. Nilsson, Janusz Olejnik, Mikaell Ottosson-Löfvenius, Walter Oechel, Frans-Jan W. Parmentier, Matthias Peichl, Norbert Pirk, Olli Peltola, Włodzimierz Pawlak, Daniel Rasse, Janne Rinne, Gaius Shaver, Hans Peter Schmid, Matteo Sottocornola, Rainer Steinbrecher, Torsten Sachs, Marek Urbaniak, Donatella Zona, and Klaudia Ziemblinska
Geosci. Model Dev., 11, 497–519, https://doi.org/10.5194/gmd-11-497-2018, https://doi.org/10.5194/gmd-11-497-2018, 2018
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Northern peatlands store large amount of soil carbon and are vulnerable to climate change. We implemented peatland hydrological and carbon accumulation processes into the ORCHIDEE land surface model. The model was evaluated against EC measurements from 30 northern peatland sites. The model generally well reproduced the spatial gradient and temporal variations in GPP and NEE at these sites. Water table depth was not well predicted but had only small influence on simulated NEE.
Rémi Cardinael, Bertrand Guenet, Tiphaine Chevallier, Christian Dupraz, Thomas Cozzi, and Claire Chenu
Biogeosciences, 15, 297–317, https://doi.org/10.5194/bg-15-297-2018, https://doi.org/10.5194/bg-15-297-2018, 2018
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The introduction of trees in an agricultural field modifies organic matter (OM) inputs to the soil (litterfall, root litter), the microclimate, and the stabilization and decomposition processes of OM. These changes could affect soil organic carbon (SOC) storage, but the importance of each process is not well known. In a long-term agroforestry trial, we showed that SOC storage could be explained by high OM inputs to the soil but that enhanced decomposition could also have reduced this potential.
Matthieu Guimberteau, Dan Zhu, Fabienne Maignan, Ye Huang, Chao Yue, Sarah Dantec-Nédélec, Catherine Ottlé, Albert Jornet-Puig, Ana Bastos, Pierre Laurent, Daniel Goll, Simon Bowring, Jinfeng Chang, Bertrand Guenet, Marwa Tifafi, Shushi Peng, Gerhard Krinner, Agnès Ducharne, Fuxing Wang, Tao Wang, Xuhui Wang, Yilong Wang, Zun Yin, Ronny Lauerwald, Emilie Joetzjer, Chunjing Qiu, Hyungjun Kim, and Philippe Ciais
Geosci. Model Dev., 11, 121–163, https://doi.org/10.5194/gmd-11-121-2018, https://doi.org/10.5194/gmd-11-121-2018, 2018
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Improved projections of future Arctic and boreal ecosystem transformation require improved land surface models that integrate processes specific to these cold biomes. To this end, this study lays out relevant new parameterizations in the ORCHIDEE-MICT land surface model. These describe the interactions between soil carbon, soil temperature and hydrology, and their resulting feedbacks on water and CO2 fluxes, in addition to a recently developed fire module.
Allison N. Schwier, Karine Sellegri, Sébastien Mas, Bruno Charrière, Jorge Pey, Clémence Rose, Brice Temime-Roussel, Jean-Luc Jaffrezo, David Parin, David Picard, Mickael Ribeiro, Greg Roberts, Richard Sempéré, Nicolas Marchand, and Barbara D'Anna
Atmos. Chem. Phys., 17, 14645–14660, https://doi.org/10.5194/acp-17-14645-2017, https://doi.org/10.5194/acp-17-14645-2017, 2017
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In the present paper, we quantify sea-to-air emission fluxes of aerosol to the atmosphere and characterize their physical and chemical properties as a function of the seawater biochemical and physical properties. Fluxes are evaluated with an original approach, a "lab in the field" experiment that preserves the seawater and atmospheric complexity while isolating air-to-sea exchanges from their surroundings. We show different features of the aerosol emission fluxes compared to previous findings.
Ronny Lauerwald, Pierre Regnier, Marta Camino-Serrano, Bertrand Guenet, Matthieu Guimberteau, Agnès Ducharne, Jan Polcher, and Philippe Ciais
Geosci. Model Dev., 10, 3821–3859, https://doi.org/10.5194/gmd-10-3821-2017, https://doi.org/10.5194/gmd-10-3821-2017, 2017
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ORCHILEAK is a new branch of the terrestrial ecosystem model ORCHIDEE that represents dissolved organic carbon (DOC) production from canopy and soils, DOC and CO2 leaching from soils to streams, DOC decomposition, and CO2 evasion to the atmosphere during its lateral transport in rivers, as well as exchange with the soil carbon and litter stocks on floodplains and in swamps. We parameterized and validated ORCHILEAK for the Amazon basin.
Daniel S. Goll, Nicolas Vuichard, Fabienne Maignan, Albert Jornet-Puig, Jordi Sardans, Aurelie Violette, Shushi Peng, Yan Sun, Marko Kvakic, Matthieu Guimberteau, Bertrand Guenet, Soenke Zaehle, Josep Penuelas, Ivan Janssens, and Philippe Ciais
Geosci. Model Dev., 10, 3745–3770, https://doi.org/10.5194/gmd-10-3745-2017, https://doi.org/10.5194/gmd-10-3745-2017, 2017
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We describe a representation of the terrestrial phosphorus cycle for the ORCHIDEE land surface model. The model is able to reproduce the observed shift from nitrogen to phosphorus limited net primary productivity along a soil formation chronosequence in Hawaii, as well as the contrasting responses of net primary productivity to nutrient addition. However, the simulated nutrient use efficiencies are lower, as observed primarily due to biases in the nutrient content and turnover of woody biomass.
Amélie Saunier, Elena Ormeño, Christophe Boissard, Henri Wortham, Brice Temime-Roussel, Caroline Lecareux, Alexandre Armengaud, and Catherine Fernandez
Atmos. Chem. Phys., 17, 7555–7566, https://doi.org/10.5194/acp-17-7555-2017, https://doi.org/10.5194/acp-17-7555-2017, 2017
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We investigated the BVOC emissions variations of Quercus Pubescens, under natural and amplified drought, in situ, in order to determine the dependency to light and/or temperature of these emissions. Our results showed that all BVOC emissions were reduced with amplified drought.
Moreover, we highlighted two dependences: (i) light and temperature and (ii) light and temperature during the day and to temperature during the night. These results can be useful to enhance emission models.
Emily A. Bruns, Jay G. Slowik, Imad El Haddad, Dogushan Kilic, Felix Klein, Josef Dommen, Brice Temime-Roussel, Nicolas Marchand, Urs Baltensperger, and André S. H. Prévôt
Atmos. Chem. Phys., 17, 705–720, https://doi.org/10.5194/acp-17-705-2017, https://doi.org/10.5194/acp-17-705-2017, 2017
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We characterize primary and aged gaseous emissions from residential wood combustion using proton transfer reaction time-of-flight mass spectrometry. This approach allows for improved characterization, particularly of oxygenated gases, which are a considerable fraction of the total gaseous mass emitted during residential wood combustion. This study is the first thorough characterization of organic gases from this source and provides a benchmark for future studies.
Sauveur Belviso, Ilja Marco Reiter, Benjamin Loubet, Valérie Gros, Juliette Lathière, David Montagne, Marc Delmotte, Michel Ramonet, Cerise Kalogridis, Benjamin Lebegue, Nicolas Bonnaire, Victor Kazan, Thierry Gauquelin, Catherine Fernandez, and Bernard Genty
Atmos. Chem. Phys., 16, 14909–14923, https://doi.org/10.5194/acp-16-14909-2016, https://doi.org/10.5194/acp-16-14909-2016, 2016
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The role that soil, foliage, and atmospheric dynamics have on surface OCS exchange in a Mediterranean forest ecosystem in southern France (O3HP) was investigated in June of 2012 and 2013 with essentially a top-down approach. Atmospheric data suggest that the site is appropriate for estimating GPP directly from eddy covariance measurements of OCS fluxes, but it is less adequate for scaling NEE to GPP from observations of vertical gradients of OCS relative to CO2 during the daytime.
Palmira Messina, Juliette Lathière, Katerina Sindelarova, Nicolas Vuichard, Claire Granier, Josefine Ghattas, Anne Cozic, and Didier A. Hauglustaine
Atmos. Chem. Phys., 16, 14169–14202, https://doi.org/10.5194/acp-16-14169-2016, https://doi.org/10.5194/acp-16-14169-2016, 2016
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We provide BVOC emissions for the present scenario, employing the updated ORCHIDEE emission module and the MEGAN model. The modelling community still faces the problem of emission model evaluation because of the absence of adequate observations. The accurate analysis performed, employing the two models, allowed the various processes modelled to be investigated, in order to fully understand the origin of the mismatch between the model estimates and to quantify the emission uncertainties.
Svenja Bartsch, Bertrand Guenet, Christophe Boissard, Juliette Lathière, Jean-Yves Peterschmitt, Annemiek Stegehuis, Ilja-M. Reiter, Thierry Gauquelin, Virginie Baldy, and Catherine Fernandez
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-491, https://doi.org/10.5194/bg-2016-491, 2016
Revised manuscript not accepted
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Mediterranean ecosystems are significant carbon sinks but the carbon dynamic in such ecosystem is still not fully understood. An improved understanding of the drivers of the carbon fixation by plants is needed to better predict how such ecosystems will respond to climate change. We showed that annual precipitation was not a significant driver of annual carbon fixation by plants.
Marta Camino-Serrano, Elisabeth Graf Pannatier, Sara Vicca, Sebastiaan Luyssaert, Mathieu Jonard, Philippe Ciais, Bertrand Guenet, Bert Gielen, Josep Peñuelas, Jordi Sardans, Peter Waldner, Sophia Etzold, Guia Cecchini, Nicholas Clarke, Zoran Galić, Laure Gandois, Karin Hansen, Jim Johnson, Uwe Klinck, Zora Lachmanová, Antti-Jussi Lindroos, Henning Meesenburg, Tiina M. Nieminen, Tanja G. M. Sanders, Kasia Sawicka, Walter Seidling, Anne Thimonier, Elena Vanguelova, Arne Verstraeten, Lars Vesterdal, and Ivan A. Janssens
Biogeosciences, 13, 5567–5585, https://doi.org/10.5194/bg-13-5567-2016, https://doi.org/10.5194/bg-13-5567-2016, 2016
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We investigated the long-term trends of dissolved organic carbon (DOC) in soil solution and the drivers of changes in over 100 forest monitoring plots across Europe. An overall increasing trend was detected in the organic layers, but no overall trend was found in the mineral horizons. There are strong interactions between controls acting at local and regional scales. Our findings are relevant for researchers focusing on the link between terrestrial and aquatic ecosystems and for C-cycle models.
Rachel Gemayel, Stig Hellebust, Brice Temime-Roussel, Nathalie Hayeck, Johannes T. Van Elteren, Henri Wortham, and Sasho Gligorovski
Atmos. Meas. Tech., 9, 1947–1959, https://doi.org/10.5194/amt-9-1947-2016, https://doi.org/10.5194/amt-9-1947-2016, 2016
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LAAP-ToF-MS has been optimized for particle size and number concentration evolution and characterization of the chemical composition of ambient particles by following specific ions.
The advantage of this instrument is that it can analyze the ambient particles online and continuously. It is capable of analyzing inorganic material in ambient particles; in particular the presence of metals can be analyzed. Last but not least, it is a compact and easily transportable tool for field measurements.
Bertrand Guenet, Fernando Esteban Moyano, Philippe Peylin, Philippe Ciais, and Ivan A Janssens
Geosci. Model Dev., 9, 841–855, https://doi.org/10.5194/gmd-9-841-2016, https://doi.org/10.5194/gmd-9-841-2016, 2016
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We present a simple conceptual model of soil carbon decomposition (PRIM) able to reproduce priming experiments. Parameters were optimized using a Bayesian framework and evaluated against another set of soil incubation. PRIM better fit data than the original, CENTURY-type soil decomposition model. We then compared both models incorporated into the global land biosphere model ORCHIDEE. Both versions reproduced observed decay litter rates, but only ORCHIDEE-PRIM could simulate the observed priming.
L. Brégonzio-Rozier, C. Giorio, F. Siekmann, E. Pangui, S. B. Morales, B. Temime-Roussel, A. Gratien, V. Michoud, M. Cazaunau, H. L. DeWitt, A. Tapparo, A. Monod, and J.-F. Doussin
Atmos. Chem. Phys., 16, 1747–1760, https://doi.org/10.5194/acp-16-1747-2016, https://doi.org/10.5194/acp-16-1747-2016, 2016
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The impact of cloud events on isoprene secondary organic aerosol (SOA) formation has been studied from an isoprene/ NOx/light system in an atmospheric simulation chamber. aqSOA formation can be linked to water soluble volatile organic compounds' dissolution in the aqueous phase and to further aqueous phase reactions. Cloud-induced SOA formation is experimentally demonstrated in this study, thus highlighting the importance of aqueous multiphase systems in atmospheric SOA formation estimations.
N. Zannoni, V. Gros, M. Lanza, R. Sarda, B. Bonsang, C. Kalogridis, S. Preunkert, M. Legrand, C. Jambert, C. Boissard, and J. Lathiere
Atmos. Chem. Phys., 16, 1619–1636, https://doi.org/10.5194/acp-16-1619-2016, https://doi.org/10.5194/acp-16-1619-2016, 2016
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Our manuscript shows results of OH reactivity and Biogenic Volatile Organic Compounds (BVOCs) concentration during a field experiment conducted in late spring 2014 at the Observatoire de Haute Provence (OHP) site. We found that OH reactivity is among the highest measured in forests globally (69 s−1) and it is mainly due to isoprene. No missing reactivity was present during daytime inside or above the canopy, while 50 % missing reactivity was found by night at both heights.
T. Verbeke, J. Lathière, S. Szopa, and N. de Noblet-Ducoudré
Atmos. Chem. Phys., 15, 13555–13568, https://doi.org/10.5194/acp-15-13555-2015, https://doi.org/10.5194/acp-15-13555-2015, 2015
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Dry deposition is a key component of surface-atmosphere exchange of compounds, acting as a sink for several chemical species and strongly driven by meteorological factors, chemical properties of the trace gas considered and land surface properties. The objective of our study is to investigate the impact of vegetation distribution change, which is still not very well quantified, on the dry deposition of key atmospheric species: ozone and nitric acid vapor.
J. G. Levine, A. R. MacKenzie, O. J. Squire, A. T. Archibald, P. T. Griffiths, N. L. Abraham, J. A. Pyle, D. E. Oram, G. Forster, J. F. Brito, J. D. Lee, J. R. Hopkins, A. C. Lewis, S. J. B. Bauguitte, C. F. Demarco, P. Artaxo, P. Messina, J. Lathière, D. A. Hauglustaine, E. House, C. N. Hewitt, and E. Nemitz
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-15-24251-2015, https://doi.org/10.5194/acpd-15-24251-2015, 2015
Revised manuscript has not been submitted
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This study explores our ability to simulate atmospheric chemistry stemming from isoprene emissions—a reactive gas emitted from vegetation—in pristine and polluted regions of the Amazon basin. We explore how two contrasting models fare in reproducing recent airborne measurements in the region. Their differing treatments of transport and mixing are found to: profoundly affect their performance; and yield very different pictures of the exposure of the rainforest to harmful ozone concentrations.
H. L. DeWitt, S. Hellebust, B. Temime-Roussel, S. Ravier, L. Polo, V. Jacob, C. Buisson, A. Charron, M. André, A. Pasquier, J. L. Besombes, J. L. Jaffrezo, H. Wortham, and N. Marchand
Atmos. Chem. Phys., 15, 4373–4387, https://doi.org/10.5194/acp-15-4373-2015, https://doi.org/10.5194/acp-15-4373-2015, 2015
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By performing source-apportionment modeling, the amount of primary and secondary organic emissions was resolved from a bulk aerosol data set measured adjacent to a major highway in France. Over 70% of vehicles on this highway were diesel, and a high concentration of BC and NOx were measured. Even close to a major highway, the bulk of the aerosol mass was secondary in nature. Radiocarbon data revealed that most of the fossil organic carbon was from primary vehicular emissions and not from SOA.
C. Denjean, P. Formenti, B. Picquet-Varrault, E. Pangui, P. Zapf, Y. Katrib, C. Giorio, A. Tapparo, A. Monod, B. Temime-Roussel, P. Decorse, C. Mangeney, and J. F. Doussin
Atmos. Chem. Phys., 15, 3339–3358, https://doi.org/10.5194/acp-15-3339-2015, https://doi.org/10.5194/acp-15-3339-2015, 2015
L. Brégonzio-Rozier, F. Siekmann, C. Giorio, E. Pangui, S. B. Morales, B. Temime-Roussel, A. Gratien, V. Michoud, S. Ravier, M. Cazaunau, A. Tapparo, A. Monod, and J.-F. Doussin
Atmos. Chem. Phys., 15, 2953–2968, https://doi.org/10.5194/acp-15-2953-2015, https://doi.org/10.5194/acp-15-2953-2015, 2015
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First- and higher order -generation products formed from the oxidation of isoprene and methacrolein with OH radicals in the presence of NOx have been studied in a simulation chamber. Differences in light source are proposed to partially explain the discrepancies observed between different studies in the literature for both isoprene- and methacrolein-SOA mass yields. According to our results, these SOA yields in the atmosphere could be lower than suggested by most of the current chamber studies.
C. Xiao, I. A. Janssens, Y. Zhou, J. Su, Y. Liang, and B. Guenet
Biogeosciences, 12, 757–767, https://doi.org/10.5194/bg-12-757-2015, https://doi.org/10.5194/bg-12-757-2015, 2015
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Global climate change may increase the litter inputs in some ecosystems impacting the soil–plant system functioning. We added litter, to the 10–20 cm subsoil layer of a steppe community at different rates. Small litter additions had no effect on the stoichiometry, whereas the highest additions (not realistic compared to the future predictions) modified the system slightly. It suggests that the grassland studied here is resilient to more plausible inputs in terms of stoichiometric functioning.
C. Denjean, P. Formenti, B. Picquet-Varrault, M. Camredon, E. Pangui, P. Zapf, Y. Katrib, C. Giorio, A. Tapparo, B. Temime-Roussel, A. Monod, B. Aumont, and J. F. Doussin
Atmos. Chem. Phys., 15, 883–897, https://doi.org/10.5194/acp-15-883-2015, https://doi.org/10.5194/acp-15-883-2015, 2015
A.-C. Genard-Zielinski, C. Boissard, C. Fernandez, C. Kalogridis, J. Lathière, V. Gros, N. Bonnaire, and E. Ormeño
Atmos. Chem. Phys., 15, 431–446, https://doi.org/10.5194/acp-15-431-2015, https://doi.org/10.5194/acp-15-431-2015, 2015
P. Renard, F. Siekmann, G. Salque, C. Demelas, B. Coulomb, L. Vassalo, S. Ravier, B. Temime-Roussel, D. Voisin, and A. Monod
Atmos. Chem. Phys., 15, 21–35, https://doi.org/10.5194/acp-15-21-2015, https://doi.org/10.5194/acp-15-21-2015, 2015
C. Kalogridis, V. Gros, R. Sarda-Esteve, B. Langford, B. Loubet, B. Bonsang, N. Bonnaire, E. Nemitz, A.-C. Genard, C. Boissard, C. Fernandez, E. Ormeño, D. Baisnée, I. Reiter, and J. Lathière
Atmos. Chem. Phys., 14, 10085–10102, https://doi.org/10.5194/acp-14-10085-2014, https://doi.org/10.5194/acp-14-10085-2014, 2014
D. R. Gentner, E. Ormeño, S. Fares, T. B. Ford, R. Weber, J.-H. Park, J. Brioude, W. M. Angevine, J. F. Karlik, and A. H. Goldstein
Atmos. Chem. Phys., 14, 5393–5413, https://doi.org/10.5194/acp-14-5393-2014, https://doi.org/10.5194/acp-14-5393-2014, 2014
O. J. Squire, A. T. Archibald, N. L. Abraham, D. J. Beerling, C. N. Hewitt, J. Lathière, R. C. Pike, P. J. Telford, and J. A. Pyle
Atmos. Chem. Phys., 14, 1011–1024, https://doi.org/10.5194/acp-14-1011-2014, https://doi.org/10.5194/acp-14-1011-2014, 2014
B. Guenet, F. E. Moyano, N. Vuichard, G. J. D. Kirk, P. H. Bellamy, S. Zaehle, and P. Ciais
Geosci. Model Dev., 6, 2153–2163, https://doi.org/10.5194/gmd-6-2153-2013, https://doi.org/10.5194/gmd-6-2153-2013, 2013
B. Guenet, T. Eglin, N. Vasilyeva, P. Peylin, P. Ciais, and C. Chenu
Biogeosciences, 10, 2379–2392, https://doi.org/10.5194/bg-10-2379-2013, https://doi.org/10.5194/bg-10-2379-2013, 2013
Related subject area
Biogeochemistry: Air - Land Exchange
A climate-dependent global model of ammonia emissions from chicken farming
Calculating canopy stomatal conductance from eddy covariance measurements, in light of the energy budget closure problem
Decoupling of a Douglas fir canopy: a look into the subcanopy with continuous vertical temperature profiles
Variations in diurnal and seasonal net ecosystem carbon dioxide exchange in a semiarid sandy grassland ecosystem in China's Horqin Sandy Land
Biogenic volatile organic compound ambient mixing ratios and emission rates in the Alaskan Arctic tundra
Surfaces of silver birch (Betula pendula) are sources of biological ice nuclei: in vivo and in situ investigations
Ideas and perspectives: enhancing the impact of the FLUXNET network of eddy covariance sites
Evapotranspiration over agroforestry sites in Germany
OH reactivity from the emissions of different tree species: investigating the missing reactivity in a boreal forest
Technical Note: Inexpensive modification of Exetainers for the reliable storage of trace-level hydrogen and carbon monoxide gas samples
Winter atmospheric nutrients and pollutants deposition on West Sayan mountain lakes (Siberia)
Vegetation influence and environmental controls on greenhouse gas fluxes from a drained thermokarst lake in the western Canadian Arctic
Examining the link between vegetation leaf area and land–atmosphere exchange of water, energy, and carbon fluxes using FLUXNET data
CloudRoots: integration of advanced instrumental techniques and process modelling of sub-hourly and sub-kilometre land–atmosphere interactions
Environmental controls on ecosystem-scale cold-season methane and carbon dioxide fluxes in an Arctic tundra ecosystem
Distinguishing between early- and late-covering crops in the land surface model Noah-MP: impact on simulated surface energy fluxes and temperature
A robust data cleaning procedure for eddy covariance flux measurements
Scaling carbon fluxes from eddy covariance sites to globe: synthesis and evaluation of the FLUXCOM approach
Leveraging the signature of heterotrophic respiration on atmospheric CO2 for model benchmarking
Estimating causal networks in biosphere–atmosphere interaction with the PCMCI approach
Methane efflux from an American bison herd
A double peak in the seasonality of California's photosynthesis as observed from space
Nitrogen use efficiency and N2O and NH3 losses attributed to three fertiliser types applied to an intensively managed silage crop
Biogenic isoprenoid emissions under drought stress: different responses for isoprene and terpenes
Insights from mercury stable isotopes on terrestrial–atmosphere exchange of Hg(0) in the Arctic tundra
Reviews and syntheses: Turning the challenges of partitioning ecosystem evaporation and transpiration into opportunities
El Niño–Southern Oscillation (ENSO) event reduces CO2 uptake of an Indonesian oil palm plantation
Carbon–water flux coupling under progressive drought
Reviews and syntheses: influences of landscape structure and land uses on local to regional climate and air quality
Identification of secondary fatty alcohols in atmospheric aerosols in temperate forests
Modelling land–atmosphere daily exchanges of NO, NH3, and CO2 in a semi-arid grazed ecosystem in Senegal
Simulating the atmospheric CO2 concentration across the heterogeneous landscape of Denmark using a coupled atmosphere–biosphere mesoscale model system
Evaluating multi-year, multi-site data on the energy balance closure of eddy-covariance flux measurements at cropland sites in southwestern Germany
Interpreting eddy covariance data from heterogeneous Siberian tundra: land-cover-specific methane fluxes and spatial representativeness
Global atmospheric CO2 inverse models converging on neutral tropical land exchange, but disagreeing on fossil fuel and atmospheric growth rate
Assessing biotic contributions to CO2 fluxes in northern China using the Vegetation, Photosynthesis and Respiration Model (VPRM-CHINA) and observations from 2005 to 2009
Assessing the dynamics of vegetation productivity in circumpolar regions with different satellite indicators of greenness and photosynthesis
Reviews and syntheses: Carbon use efficiency from organisms to ecosystems – definitions, theories, and empirical evidence
Eddy covariance flux errors due to random and systematic timing errors during data acquisition
Synthetic ozone deposition and stomatal uptake at flux tower sites
Integrated management of a Swiss cropland is not sufficient to preserve its soil carbon pool in the long term
Basic and extensible post-processing of eddy covariance flux data with REddyProc
Carbon exchange in an Amazon forest: from hours to years
An assessment of natural methane fluxes simulated by the CLASS-CTEM model
Ammonia emission measurements of an intensively grazed pasture
Resource and physiological constraints on global crop production enhancements from atmospheric particulate matter and nitrogen deposition
Technical note: In situ measurement of flux and isotopic composition of CO2 released during oxidative weathering of sedimentary rocks
Leaf phenology as one important driver of seasonal changes in isoprene emissions in central Amazonia
Recent past (1979–2014) and future (2070–2099) isoprene fluxes over Europe simulated with the MEGAN–MOHYCAN model
Upside-down fluxes Down Under: CO2 net sink in winter and net source in summer in a temperate evergreen broadleaf forest
Jize Jiang, David S. Stevenson, Aimable Uwizeye, Giuseppe Tempio, and Mark A. Sutton
Biogeosciences, 18, 135–158, https://doi.org/10.5194/bg-18-135-2021, https://doi.org/10.5194/bg-18-135-2021, 2021
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Ammonia is a key water and air pollutant and impacts human health and climate change. Ammonia emissions mainly originate from agriculture. We find that chicken agriculture contributes to large ammonia emissions, especially in hot and wet regions. These emissions can be greatly affected by the local environment, i.e. temperature and humidity, and also by human management. We develop a model that suggests ammonia emissions from chicken farming are likely to increase under a warming climate.
Richard Wehr and Scott R. Saleska
Biogeosciences, 18, 13–24, https://doi.org/10.5194/bg-18-13-2021, https://doi.org/10.5194/bg-18-13-2021, 2021
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Water and carbon exchange between plants and the atmosphere is governed by stomata: adjustable pores in the surfaces of leaves. The combined gas conductance of all the stomata in a canopy has long been estimated using an equation that is shown here to be systematically incorrect because it relies on measurements that are generally inadequate. An alternative approach is shown to be more accurate in all probable scenarios and to imply different responses of stomatal conductance to the environment.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Yayi Niu, Yuqiang Li, Hanbo Yun, Xuyang Wang, Xiangwen Gong, Yulong Duan, and Jing Liu
Biogeosciences, 17, 6309–6326, https://doi.org/10.5194/bg-17-6309-2020, https://doi.org/10.5194/bg-17-6309-2020, 2020
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We report the results from continuous year-round CO2 observations from a sandy grassland in the Horqin Sandy Land using the eddy covariance technique. To quantify the diurnal, seasonal, and annual variation in net ecosystem CO2 exchange, gross primary productivity, and ecosystem respiration and to identify the different scales of environmental factors and the underlying mechanisms, we also explored how the annual precipitation affects the net ecosystem CO2 exchange and its components.
Hélène Angot, Katelyn McErlean, Lu Hu, Dylan B. Millet, Jacques Hueber, Kaixin Cui, Jacob Moss, Catherine Wielgasz, Tyler Milligan, Damien Ketcherside, M. Syndonia Bret-Harte, and Detlev Helmig
Biogeosciences, 17, 6219–6236, https://doi.org/10.5194/bg-17-6219-2020, https://doi.org/10.5194/bg-17-6219-2020, 2020
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We report biogenic volatile organic compounds (BVOCs) ambient levels and emission rates from key vegetation species in the Alaskan arctic tundra, providing a new data set to further constrain isoprene chemistry under low NOx conditions in models. We add to the growing body of evidence that climate-induced changes in the vegetation composition will significantly affect the BVOC emission potential of the tundra, with implications for atmospheric oxidation processes and climate feedbacks.
Teresa M. Seifried, Paul Bieber, Laura Felgitsch, Julian Vlasich, Florian Reyzek, David G. Schmale III, and Hinrich Grothe
Biogeosciences, 17, 5655–5667, https://doi.org/10.5194/bg-17-5655-2020, https://doi.org/10.5194/bg-17-5655-2020, 2020
Dario Papale
Biogeosciences, 17, 5587–5598, https://doi.org/10.5194/bg-17-5587-2020, https://doi.org/10.5194/bg-17-5587-2020, 2020
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FLUXNET is a large, bottom-up, self-coordinated network of sites. It provided ecosystem–atmosphere greenhouse gas fluxes from stations around the world that were used as bases for a large number of publications and studies. Today many applications require recent updates on the data to track more closely the ecosystem responses to climate change and link ground data with satellite programs. For this reason, a new organization of FLUXNET is needed, keeping as its target the FAIR principles.
Christian Markwitz, Alexander Knohl, and Lukas Siebicke
Biogeosciences, 17, 5183–5208, https://doi.org/10.5194/bg-17-5183-2020, https://doi.org/10.5194/bg-17-5183-2020, 2020
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Agroforestry has been shown to alter the microclimate and to lead to higher carbon sequestration above ground and in the soil. In this study, we investigated the impact of agroforestry systems on system-scale evapotranspiration (ET) due to concerns about increased water losses to the atmosphere. Results showed small differences in annual sums of ET over agroforestry relative to monoculture systems, indicating that agroforestry in Germany can be a land use alternative to monoculture agriculture.
Arnaud P. Praplan, Toni Tykkä, Simon Schallhart, Virpi Tarvainen, Jaana Bäck, and Heidi Hellén
Biogeosciences, 17, 4681–4705, https://doi.org/10.5194/bg-17-4681-2020, https://doi.org/10.5194/bg-17-4681-2020, 2020
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In this paper, we study emissions of volatile organic compounds (VOCs) from three boreal tree species. Individual compounds are quantified with on-line separation analytical techniques, while the total reactivity of the emissions is measured using a custom-built instrument. On some occasions, in particular when the trees suffer from stress, the total reactivity measured is higher than the sum of the reactivity of individual compounds. This indicates that the threes emit VOCs that remain unknown.
Philipp A. Nauer, Eleonora Chiri, Thanavit Jirapanjawat, Chris Greening, and Perran L. M. Cook
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-282, https://doi.org/10.5194/bg-2020-282, 2020
Revised manuscript accepted for BG
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Hydrogen (H2) and carbon monoxide (CO) are atmospheric trace gases cycled via microbial metabolisms. We observed strong H2 and CO contamination from rubber septa used to seal common gas-sample storage vials. Here we propose a simple and inexpensive modification of such vials to allow reliable storage of H2, CO and methane trace-gas samples for timescales of weeks to months, thus enabling extensive field campaigns to investigate H2 and CO biogeochemistry in remote areas.
Daniel Diaz-de-Quijano, Aleksander Vladimirovich Ageev, Elena Anatolevna Ivanova, and Olesia Valerevna Anishchenko
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-125, https://doi.org/10.5194/bg-2020-125, 2020
Preprint under review for BG
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Winter atmospheric nitrogen and phosphorus depositions were measured for the first time in the West Sayan mountains (Siberia). The low and very low atmospheric N and P depositions could be responsible for the observed lake phytoplankton N-P colimitation. We hypothesize that slight imbalances in the nutrient deposition, as expected in the context of global change (climate, forest fire regime, and anthropogenic nitrogen emissions), could have important effects on the ecology of these lakes.
June Skeeter, Andreas Christen, Andrée-Anne Laforce, Elyn Humphreys, and Greg Henry
Biogeosciences, 17, 4421–4441, https://doi.org/10.5194/bg-17-4421-2020, https://doi.org/10.5194/bg-17-4421-2020, 2020
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This study investigates carbon fluxes at Illisarvik, an artificial drained thermokarst lake basin (DTLB) in Canada's Northwest Territories. This is the first carbon balance study in a DTLB outside of Alaska. We used neural networks to identify the factors controlling fluxes and to model the effects of the controlling factors. We discuss the role of vegetation heterogeneity in fluxes, especially of methane, and we show how the carbon fluxes differ from Alaskan DTLBs.
Anne J. Hoek van Dijke, Kaniska Mallick, Martin Schlerf, Miriam Machwitz, Martin Herold, and Adriaan J. Teuling
Biogeosciences, 17, 4443–4457, https://doi.org/10.5194/bg-17-4443-2020, https://doi.org/10.5194/bg-17-4443-2020, 2020
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We investigated the link between the vegetation leaf area index (LAI) and the land–atmosphere exchange of water, energy, and carbon fluxes. We show that the correlation between the LAI and water and energy fluxes depends on the vegetation type and aridity. For carbon fluxes, however, the correlation with the LAI was strong and independent of vegetation and aridity. This study provides insight into when the vegetation LAI can be used to model or extrapolate land–atmosphere fluxes.
Jordi Vilà-Guerau de Arellano, Patrizia Ney, Oscar Hartogensis, Hugo de Boer, Kevin van Diepen, Dzhaner Emin, Geiske de Groot, Anne Klosterhalfen, Matthias Langensiepen, Maria Matveeva, Gabriela Miranda-García, Arnold F. Moene, Uwe Rascher, Thomas Röckmann, Getachew Adnew, Nicolas Brüggemann, Youri Rothfuss, and Alexander Graf
Biogeosciences, 17, 4375–4404, https://doi.org/10.5194/bg-17-4375-2020, https://doi.org/10.5194/bg-17-4375-2020, 2020
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The CloudRoots field experiment has obtained an open comprehensive observational data set that includes soil, plant, and atmospheric variables to investigate the interactions between a heterogeneous land surface and its overlying atmospheric boundary layer, including the rapid perturbations of clouds in evapotranspiration. Our findings demonstrate that in order to understand and represent diurnal variability, we need to measure and model processes from the leaf to the landscape scales.
Dean Howard, Yannick Agnan, Detlev Helmig, Yu Yang, and Daniel Obrist
Biogeosciences, 17, 4025–4042, https://doi.org/10.5194/bg-17-4025-2020, https://doi.org/10.5194/bg-17-4025-2020, 2020
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The Arctic tundra represents a vast store of carbon that may be broken down by microbial activity into greenhouse gases such as CO2 and CH4. Though microbes are less active in winter, the long duration of the cold season makes this period very important for carbon cycling. We show that, under conditions of warmer winter air temperatures and greater snowfall, deeper soils can remain warm enough to sustain significantly enhanced CH4 emission. This could have large implications for future climates.
Kristina Bohm, Joachim Ingwersen, Josipa Milovac, and Thilo Streck
Biogeosciences, 17, 2791–2805, https://doi.org/10.5194/bg-17-2791-2020, https://doi.org/10.5194/bg-17-2791-2020, 2020
Domenico Vitale, Gerardo Fratini, Massimo Bilancia, Giacomo Nicolini, Simone Sabbatini, and Dario Papale
Biogeosciences, 17, 1367–1391, https://doi.org/10.5194/bg-17-1367-2020, https://doi.org/10.5194/bg-17-1367-2020, 2020
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This work describes a data cleaning procedure for the detection of eddy covariance fluxes affected by systematic errors. We believe that the proposed procedure can serve as a basis toward a unified quality control strategy suitable for the centralized data processing pipelines, where the use of completely data-driven and scalable procedures that guarantee high-quality standards and reproducibility of the released products constitutes an essential prerequisite.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Samantha J. Basile, Xin Lin, William R. Wieder, Melannie D. Hartman, and Gretchen Keppel-Aleks
Biogeosciences, 17, 1293–1308, https://doi.org/10.5194/bg-17-1293-2020, https://doi.org/10.5194/bg-17-1293-2020, 2020
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Soil heterotrophic respiration (HR) is an important component of land–atmosphere carbon exchange but is difficult to observe globally. We analyzed the imprint that this flux leaves on atmospheric CO2 using a set of simulations from HR models with common inputs. Models that represent microbial processes are more variable and have stronger temperature sensitivity than those that do not. Our results show that we can use atmospheric CO2 observations to evaluate and improve models of HR.
Christopher Krich, Jakob Runge, Diego G. Miralles, Mirco Migliavacca, Oscar Perez-Priego, Tarek El-Madany, Arnaud Carrara, and Miguel D. Mahecha
Biogeosciences, 17, 1033–1061, https://doi.org/10.5194/bg-17-1033-2020, https://doi.org/10.5194/bg-17-1033-2020, 2020
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Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Paul C. Stoy, Adam A. Cook, John E. Dore, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-38, https://doi.org/10.5194/bg-2020-38, 2020
Revised manuscript accepted for BG
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The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 17, 405–422, https://doi.org/10.5194/bg-17-405-2020, https://doi.org/10.5194/bg-17-405-2020, 2020
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We present the highest resolution solar-induced chlorophyll fluorescence (SIF) dataset from satellite measurements, providing previously unobservable phenomena related to plant photosynthesis. We find a strong correspondence between TROPOMI SIF and AmeriFlux GPP. We then observe a double peak in the seasonality of California's photosynthesis, not seen by traditional vegetation indices (e.g., MODIS). This is further corroborated by EOF/PC analysis.
Nicholas Cowan, Peter Levy, Andrea Moring, Ivan Simmons, Colin Bache, Amy Stephens, Joana Marinheiro, Jocelyn Brichet, Ling Song, Amy Pickard, Connie McNeill, Roseanne McDonald, Juliette Maire, Benjamin Loubet, Polina Voylokov, Mark Sutton, and Ute Skiba
Biogeosciences, 16, 4731–4745, https://doi.org/10.5194/bg-16-4731-2019, https://doi.org/10.5194/bg-16-4731-2019, 2019
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Commonly used nitrogen fertilisers, ammonium nitrate, urea and urea coated with a urease inhibitor, were applied to experimental plots. Fertilisation with ammonium nitrate supported the largest yields but also resulted in the largest nitrous oxide emissions. Urea was the largest emitter of ammonia. The coated urea did not significantly increase yields; however, ammonia emissions were substantially smaller than urea. The coated urea was the best environmentally but is economically unattractive.
Boris Bonn, Ruth-Kristina Magh, Joseph Rombach, and Jürgen Kreuzwieser
Biogeosciences, 16, 4627–4645, https://doi.org/10.5194/bg-16-4627-2019, https://doi.org/10.5194/bg-16-4627-2019, 2019
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The effect of soil water availability (SWA) on emissions of isoprenoids by trees was studied by setting up a parameterization from published data. SWA impact on isoprene emissions can be described by a growth type curve, while monoterpene emissions display a pattern reflecting plants’ stomata opening. Sesquiterpene fluxes tend to increase at the start of severe drought until resources decline. Feedbacks on atmospheric processes such as ozone and aerosol particles are further studied.
Martin Jiskra, Jeroen E. Sonke, Yannick Agnan, Detlev Helmig, and Daniel Obrist
Biogeosciences, 16, 4051–4064, https://doi.org/10.5194/bg-16-4051-2019, https://doi.org/10.5194/bg-16-4051-2019, 2019
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The tundra plays a pivotal role in Arctic mercury cycling by storing atmospheric mercury deposition and shuttling it to the Arctic Ocean. We used the isotopic fingerprint of mercury to investigate the processes controlling atmospheric mercury deposition. We found that the uptake of atmospheric mercury by vegetation was the major deposition source. Direct deposition to snow or soils only played a minor role. These results improve our understanding of Arctic mercury cycling.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Christian Stiegler, Ana Meijide, Yuanchao Fan, Ashehad Ashween Ali, Tania June, and Alexander Knohl
Biogeosciences, 16, 2873–2890, https://doi.org/10.5194/bg-16-2873-2019, https://doi.org/10.5194/bg-16-2873-2019, 2019
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We show the response of a commercial oil palm plantation in Indonesia to the extreme El Niño–Southern Oscillation (ENSO) event in 2015. Our measurements and model suggest that without human-induced forest fires and related smoke emissions, the observed negative impact on oil palm carbon dioxide greenhouse gas fluxes, carbon accumulation and yield due to ENSO-related drought would have been less pronounced. With respect to climate change we highlight the importance of fire prevention in the area.
Sven Boese, Martin Jung, Nuno Carvalhais, Adriaan J. Teuling, and Markus Reichstein
Biogeosciences, 16, 2557–2572, https://doi.org/10.5194/bg-16-2557-2019, https://doi.org/10.5194/bg-16-2557-2019, 2019
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This study examines how limited water availability during droughts affects water-use efficiency. This metric describes how much carbon an ecosystem can assimilate for each unit of water lost by transpiration. We test how well different water-use efficiency models can capture the dynamics of transpiration decrease due to increased soil-water limitation. Accounting for the interacting effects of radiation and water limitation is necessary to accurately predict transpiration during these periods.
Raia Silvia Massad, Juliette Lathière, Susanna Strada, Mathieu Perrin, Erwan Personne, Marc Stéfanon, Patrick Stella, Sophie Szopa, and Nathalie de Noblet-Ducoudré
Biogeosciences, 16, 2369–2408, https://doi.org/10.5194/bg-16-2369-2019, https://doi.org/10.5194/bg-16-2369-2019, 2019
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Human activities strongly interfere in the land–atmosphere interactions through changes in land use and land cover changes and land management. The objectives of this review are to synthesize the existing experimental and modelling works that investigate physical, chemical, and biogeochemical interactions between land surface and the atmosphere. Greater consideration of atmospheric chemistry, through land–atmosphere interactions, as a decision parameter for land management is essential.
Yuzo Miyazaki, Divyavani Gowda, Eri Tachibana, Yoshiyuki Takahashi, and Tsutom Hiura
Biogeosciences, 16, 2181–2188, https://doi.org/10.5194/bg-16-2181-2019, https://doi.org/10.5194/bg-16-2181-2019, 2019
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Fatty alcohols (FAs) are major components of surface lipids and can act as surface-active atmospheric organic aerosols, influencing the cloud formation. We identified five secondary FAs in atmospheric aerosols at two temperate forest sites and revealed their distinct seasonal variation for the first time. Our results suggest that they originated mostly from plant wax and could be used as useful tracers for primary biological aerosol particles.
Claire Delon, Corinne Galy-Lacaux, Dominique Serça, Erwan Personne, Eric Mougin, Marcellin Adon, Valérie Le Dantec, Benjamin Loubet, Rasmus Fensholt, and Torbern Tagesson
Biogeosciences, 16, 2049–2077, https://doi.org/10.5194/bg-16-2049-2019, https://doi.org/10.5194/bg-16-2049-2019, 2019
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In the Sahel region during the wet season, CO2 and NO are released to the atmosphere, and NH3 is deposited on the soil. During the dry season, processes are strongly reduced. This paper shows the temporal variation in these soil–atmosphere exchanges of trace gases for 2 years, their sharp increase when the first rains fall onto dry soils, and how microbial processes are involved. We use a modelling approach, which is necessary when continuous measurements are not possible in remote regions.
Anne Sofie Lansø, Thomas Luke Smallman, Jesper Heile Christensen, Mathew Williams, Kim Pilegaard, Lise-Lotte Sørensen, and Camilla Geels
Biogeosciences, 16, 1505–1524, https://doi.org/10.5194/bg-16-1505-2019, https://doi.org/10.5194/bg-16-1505-2019, 2019
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Although coastal regions only amount to 7 % of the global oceans, their contribution to the global oceanic surface exchange of CO2 is much greater. In this study, we gain detailed insight into how these coastal marine fluxes compare to CO2 exchange from coastal land regions. Annually, the coastal marine exchanges are smaller than the total uptake of CO2 from the land surfaces within the study area but comparable in size to terrestrial fluxes from individual land cover classes of the region.
Ravshan Eshonkulov, Arne Poyda, Joachim Ingwersen, Hans-Dieter Wizemann, Tobias K. D. Weber, Pascal Kremer, Petra Högy, Alim Pulatov, and Thilo Streck
Biogeosciences, 16, 521–540, https://doi.org/10.5194/bg-16-521-2019, https://doi.org/10.5194/bg-16-521-2019, 2019
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We compared the energy balance closure (EBC) under varying environmental conditions and investigated a wide range of possible reasons for the energy imbalance. As measures for the imbalance, we used ordinary linear regression, the energy balance ratio (EBR), and the energy residual. The EBR was also investigated as a function of buoyancy, friction velocity, and atmospheric stability. Moreover, the relationship between the EBC and flux source area or footprint was also investigated.
Juha-Pekka Tuovinen, Mika Aurela, Juha Hatakka, Aleksi Räsänen, Tarmo Virtanen, Juha Mikola, Viktor Ivakhov, Vladimir Kondratyev, and Tuomas Laurila
Biogeosciences, 16, 255–274, https://doi.org/10.5194/bg-16-255-2019, https://doi.org/10.5194/bg-16-255-2019, 2019
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We analysed ecosystem-scale measurements of methane exchange between Arctic tundra and the atmosphere, taking into account the large variations in vegetation and soil properties. The measurements are spatial averages, but using meteorological and statistical modelling techniques we could estimate methane emissions for different land cover types and quantify how well the measurements correspond to the spatial variability. This provides a more accurate estimate of the regional methane emission.
Benjamin Gaubert, Britton B. Stephens, Sourish Basu, Frédéric Chevallier, Feng Deng, Eric A. Kort, Prabir K. Patra, Wouter Peters, Christian Rödenbeck, Tazu Saeki, David Schimel, Ingrid Van der Laan-Luijkx, Steven Wofsy, and Yi Yin
Biogeosciences, 16, 117–134, https://doi.org/10.5194/bg-16-117-2019, https://doi.org/10.5194/bg-16-117-2019, 2019
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We have compared global carbon budgets calculated from numerical inverse models and CO2 observations, and evaluated how these systems reproduce vertical gradients in atmospheric CO2 from aircraft measurements. We found that available models have converged on near-neutral tropical total fluxes for several decades, implying consistent sinks in intact tropical forests, and that assumed fossil fuel emissions and predicted atmospheric growth rates are now the dominant axes of disagreement.
Archana Dayalu, J. William Munger, Steven C. Wofsy, Yuxuan Wang, Thomas Nehrkorn, Yu Zhao, Michael B. McElroy, Chris P. Nielsen, and Kristina Luus
Biogeosciences, 15, 6713–6729, https://doi.org/10.5194/bg-15-6713-2018, https://doi.org/10.5194/bg-15-6713-2018, 2018
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Accounting for the vegetation signal is critical for comprehensive CO2 budget assessment in China. We model and evaluate hourly vegetation carbon dioxide (CO2) exchange (mass per unit area per unit time) in northern China from 2005 to 2009. The model is driven by satellite and meteorological data, is linked to ground-level ecosystem observations, and is applicable to other time periods. We find vegetation uptake of CO2 in summer is comparable to emissions from fossil fuels in northern China.
Sophia Walther, Luis Guanter, Birgit Heim, Martin Jung, Gregory Duveiller, Aleksandra Wolanin, and Torsten Sachs
Biogeosciences, 15, 6221–6256, https://doi.org/10.5194/bg-15-6221-2018, https://doi.org/10.5194/bg-15-6221-2018, 2018
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We explored the timing of the peak of the short annual growing season in tundra ecosystems as indicated by an extensive suite of satellite indicators of vegetation productivity. Delayed peak greenness compared to peak photosynthesis is consistently found across years and land-cover classes. Plants also experience growth after optimal conditions for assimilation regarding light and temperature have passed. Our results have implications for the modelling of the circumpolar carbon balance.
Stefano Manzoni, Petr Čapek, Philipp Porada, Martin Thurner, Mattias Winterdahl, Christian Beer, Volker Brüchert, Jan Frouz, Anke M. Herrmann, Björn D. Lindahl, Steve W. Lyon, Hana Šantrůčková, Giulia Vico, and Danielle Way
Biogeosciences, 15, 5929–5949, https://doi.org/10.5194/bg-15-5929-2018, https://doi.org/10.5194/bg-15-5929-2018, 2018
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Carbon fixed by plants and phytoplankton through photosynthesis is ultimately stored in soils and sediments or released to the atmosphere during decomposition of dead biomass. Carbon-use efficiency is a useful metric to quantify the fate of carbon – higher efficiency means higher storage and lower release to the atmosphere. Here we summarize many definitions of carbon-use efficiency and study how this metric changes from organisms to ecosystems and from terrestrial to aquatic environments.
Gerardo Fratini, Simone Sabbatini, Kevin Ediger, Brad Riensche, George Burba, Giacomo Nicolini, Domenico Vitale, and Dario Papale
Biogeosciences, 15, 5473–5487, https://doi.org/10.5194/bg-15-5473-2018, https://doi.org/10.5194/bg-15-5473-2018, 2018
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Using a simulation study and field data, we quantify the biases that can be introduced in fluxes measured by eddy covariance (EC) if the raw high-frequency data are affected by random and systematic timing misalignments. Our study was motivated by the increasingly widespread adoption of fully digital EC systems potentially subject to such timing errors. We found biases as large as 10 %. We further propose a test to evaluate EC data logging systems for their time synchronization capabilities.
Jason A. Ducker, Christopher D. Holmes, Trevor F. Keenan, Silvano Fares, Allen H. Goldstein, Ivan Mammarella, J. William Munger, and Jordan Schnell
Biogeosciences, 15, 5395–5413, https://doi.org/10.5194/bg-15-5395-2018, https://doi.org/10.5194/bg-15-5395-2018, 2018
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We have developed an accurate method (SynFlux) to estimate ozone deposition and stomatal uptake across 103 flux tower sites (43 US, 60 Europe), where ozone concentrations and fluxes have not been measured. In all, the SynFlux public dataset provides monthly values of ozone dry deposition for 926 site years across a wide array of ecosystems. The SynFlux dataset will promote further applications to ecosystem, air quality, or climate modeling across the geoscience community.
Carmen Emmel, Annina Winkler, Lukas Hörtnagl, Andrew Revill, Christof Ammann, Petra D'Odorico, Nina Buchmann, and Werner Eugster
Biogeosciences, 15, 5377–5393, https://doi.org/10.5194/bg-15-5377-2018, https://doi.org/10.5194/bg-15-5377-2018, 2018
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It is of great interest to know whether croplands act as a net source or sink of atmospheric CO2 and if soil carbon (C) stocks are preserved over long timescales due to the role of C in soil fertility. For a cropland in Switzerland it was found that managing the field under the Swiss framework of the Proof of Ecological Performance (PEP) resulted in soil C losses of 18.0 %. Additional efforts are needed to bring Swiss management practices closer to the goal of preserving soil C in the long term.
Thomas Wutzler, Antje Lucas-Moffat, Mirco Migliavacca, Jürgen Knauer, Kerstin Sickel, Ladislav Šigut, Olaf Menzer, and Markus Reichstein
Biogeosciences, 15, 5015–5030, https://doi.org/10.5194/bg-15-5015-2018, https://doi.org/10.5194/bg-15-5015-2018, 2018
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Net fluxes of carbon dioxide at the ecosystem level measured by eddy covariance are a main source for understanding biosphere–atmosphere interactions. However, there is a need for more usable and extensible tools for post-processing steps of the half-hourly flux data. Therefore, we developed the REddyProc package, providing data filtering, gap filling, and flux partitioning. The extensible functions are compatible with state-of-the-art tools but allow easier integration in extended analysis.
Matthew N. Hayek, Marcos Longo, Jin Wu, Marielle N. Smith, Natalia Restrepo-Coupe, Raphael Tapajós, Rodrigo da Silva, David R. Fitzjarrald, Plinio B. Camargo, Lucy R. Hutyra, Luciana F. Alves, Bruce Daube, J. William Munger, Kenia T. Wiedemann, Scott R. Saleska, and Steven C. Wofsy
Biogeosciences, 15, 4833–4848, https://doi.org/10.5194/bg-15-4833-2018, https://doi.org/10.5194/bg-15-4833-2018, 2018
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We investigated the roles that weather and forest disturbances like drought play in shaping changes in ecosystem photosynthesis and carbon exchange in an Amazon forest. We discovered that weather largely influenced differences between years, but a prior drought, which occurred 3 years before measurements started, likely hampered photosynthesis in the first year. This is the first atmospheric evidence that drought can have legacy impacts on Amazon forest photosynthesis.
Vivek K. Arora, Joe R. Melton, and David Plummer
Biogeosciences, 15, 4683–4709, https://doi.org/10.5194/bg-15-4683-2018, https://doi.org/10.5194/bg-15-4683-2018, 2018
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Earth system models (ESMs) project future changes in climate in response to changes in anthropogenic emissions of greenhouse gases (GHGs). However, before this can be achieved the natural fluxes of a given GHG must also be modelled. This paper evaluates the natural methane fluxes simulated by the CLASS-CTEM model (which is the land component of the Canadian ESM) against observations to show that the simulated methane emissions from wetlands and fires, and soil uptake of methane are realistic.
Karl Voglmeier, Markus Jocher, Christoph Häni, and Christof Ammann
Biogeosciences, 15, 4593–4608, https://doi.org/10.5194/bg-15-4593-2018, https://doi.org/10.5194/bg-15-4593-2018, 2018
Luke D. Schiferl, Colette L. Heald, and David Kelly
Biogeosciences, 15, 4301–4315, https://doi.org/10.5194/bg-15-4301-2018, https://doi.org/10.5194/bg-15-4301-2018, 2018
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To understand future food security, it is critical to develop realistic crop models with reliable sensitivity to environmental factors. We find that particulate matter (PM) causes a significant, but smaller, enhancement for global wheat and rice production than estimated without nutrient and physiological limitations imposed by a crop model. In contrast, maize grows near its physiological maximum, with little enhancement from PM. Nitrogen deposition leads to a small increase in crop production.
Guillaume Soulet, Robert G. Hilton, Mark H. Garnett, Mathieu Dellinger, Thomas Croissant, Mateja Ogrič, and Sébastien Klotz
Biogeosciences, 15, 4087–4102, https://doi.org/10.5194/bg-15-4087-2018, https://doi.org/10.5194/bg-15-4087-2018, 2018
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Oxidative weathering of sedimentary rocks can release carbon dioxide to the atmosphere. Here, we designed a chamber-based method to measure these CO2 emissions directly for the first time. The chamber is drilled in the rock and allows us to collect the CO2 to fingerprint its source using carbon isotopes. We tested our method in Draix (France). The measured CO2 fluxes were substantial, with ~20% originating from oxidation of the rock organic matter and ~80% from dissolution of carbonate minerals.
Eliane G. Alves, Julio Tóta, Andrew Turnipseed, Alex B. Guenther, José Oscar W. Vega Bustillos, Raoni A. Santana, Glauber G. Cirino, Julia V. Tavares, Aline P. Lopes, Bruce W. Nelson, Rodrigo A. de Souza, Dasa Gu, Trissevgeni Stavrakou, David K. Adams, Jin Wu, Scott Saleska, and Antonio O. Manzi
Biogeosciences, 15, 4019–4032, https://doi.org/10.5194/bg-15-4019-2018, https://doi.org/10.5194/bg-15-4019-2018, 2018
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This study shows that leaf quantity and leaf age have an important effect on seasonal changes in isoprene emissions and that these could play an even more important role in regulating ecosystem isoprene fluxes than light and temperature at seasonal timescales in tropical forests. These results bring novelty and new insight for future research because in the past leaf phenology was not considered as an important factor that controls biological processes in the tropics.
Maite Bauwens, Trissevgeni Stavrakou, Jean-François Müller, Bert Van Schaeybroeck, Lesley De Cruz, Rozemien De Troch, Olivier Giot, Rafiq Hamdi, Piet Termonia, Quentin Laffineur, Crist Amelynck, Niels Schoon, Bernard Heinesch, Thomas Holst, Almut Arneth, Reinhart Ceulemans, Arturo Sanchez-Lorenzo, and Alex Guenther
Biogeosciences, 15, 3673–3690, https://doi.org/10.5194/bg-15-3673-2018, https://doi.org/10.5194/bg-15-3673-2018, 2018
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Biogenic isoprene fluxes are simulated over Europe with the MEGAN–MOHYCAN model for the recent past and end-of-century climate at high spatiotemporal resolution (0.1°, 3 min). Due to climate change, fluxes increased by 40 % over 1979–2014. Climate scenarios for 2070–2099 suggest an increase by 83 % due to climate, and an even stronger increase when the potential impact of CO2 fertilization is considered (up to 141 %). Accounting for CO2 inhibition cancels out a large part of these increases.
Alexandre A. Renchon, Anne Griebel, Daniel Metzen, Christopher A. Williams, Belinda Medlyn, Remko A. Duursma, Craig V. M. Barton, Chelsea Maier, Matthias M. Boer, Peter Isaac, David Tissue, Victor Resco de Dios, and Elise Pendall
Biogeosciences, 15, 3703–3716, https://doi.org/10.5194/bg-15-3703-2018, https://doi.org/10.5194/bg-15-3703-2018, 2018
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We report the seasonality of net ecosystem–atmosphere CO2 exchange (NEE) in a temperate evergreen broadleaved forest in Sydney, Australia. We investigated how carbon exchange varied with climatic drivers and canopy dynamics (leaf area index, litter fall). We found that our site acted as a net source of carbon in summer and a net sink in winter. Ecosystem respiration (ER) drove NEE seasonality, as the seasonal amplitude of ER was greater than gross primary productivity.
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From seasonal in situ observations on how a Mediterranean ecosystem responds to drought, a specific isoprene emission (ER, emission rates) algorithm was developed, upon which 2100 projections (IPCC RCP2.6 and RCP8.5 scenarios) were made. Emission rates were found to be mainly sensitive to future temperature changes and poorly represented by current empirical emission models. Drought was found to aggravate thermal stress on emission rates.
From seasonal in situ observations on how a Mediterranean ecosystem responds to drought, a...
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