Articles | Volume 17, issue 11
https://doi.org/10.5194/bg-17-3017-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-3017-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Benchmarking and parameter sensitivity of physiological and vegetation dynamics using the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) at Barro Colorado Island, Panama
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Ryan G. Knox
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Rosie A. Fisher
Climate and Global Dynamics Division, National Center for Atmospheric
Research, Boulder, CO, USA
Centre Européen de Recherche et de Formation Avancée en Calcul
Scientifique, Toulouse, France
Jeffrey Q. Chambers
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Department of Geography, University of California, Berkeley, CA, USA
Bradley O. Christoffersen
Department of Biology, University of Texas, Rio Grande Valley,
Edinburg, TX, USA
Stuart J. Davies
Forest Global Earth Observatory, Smithsonian Tropical Research
Institute, Washington, DC, USA
Matteo Detto
Smithsonian Tropical Research Institute, Apartado 0843–03092 Balboa,
Republic of Panama
Department of Ecology and Evolutionary Biology, Princeton University,
Princeton, NJ, USA
Michael C. Dietze
Department of Earth and Environment, Boston University, Boston, MA,
USA
Boris Faybishenko
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Jennifer Holm
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Maoyi Huang
Atmospheric Sciences and Global Change Division, Pacific Northwest
National Laboratory, Richland, WA, USA
Marlies Kovenock
Department of Biology, University of Washington, Seattle, WA, USA
Lara M. Kueppers
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Energy and Resources Group, University of California, Berkeley, USA
Gregory Lemieux
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Elias Massoud
Jet Propulsion Laboratory, Pasadena, CA, USA
Nathan G. McDowell
Atmospheric Sciences and Global Change Division, Pacific Northwest
National Laboratory, Richland, WA, USA
Helene C. Muller-Landau
Forest Global Earth Observatory, Smithsonian Tropical Research
Institute, Washington, DC, USA
Smithsonian Tropical Research Institute, Apartado 0843–03092 Balboa,
Republic of Panama
Jessica F. Needham
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Richard J. Norby
Climate Change Science Institute, Environmental Sciences Division,
Oak Ridge National Laboratory, Oak Ridge, TN, USA
Thomas Powell
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Alistair Rogers
Environmental and Climate Sciences Department, Brookhaven National
Laboratory, Upton, NY, USA
Shawn P. Serbin
Environmental and Climate Sciences Department, Brookhaven National
Laboratory, Upton, NY, USA
Jacquelyn K. Shuman
Climate and Global Dynamics Division, National Center for Atmospheric
Research, Boulder, CO, USA
Abigail L. S. Swann
Department of Biology, University of Washington, Seattle, WA, USA
Department of Atmospheric Sciences, University of Washington,
Seattle, WA, USA
Charuleka Varadharajan
Climate and Ecosystem Sciences Division, Lawrence Berkeley National
Lab, Berkeley, CA, USA
Anthony P. Walker
Climate Change Science Institute, Environmental Sciences Division,
Oak Ridge National Laboratory, Oak Ridge, TN, USA
S. Joseph Wright
Smithsonian Tropical Research Institute, Apartado 0843–03092 Balboa,
Republic of Panama
Chonggang Xu
Earth and Environmental Sciences Division, Los Alamos National
Laboratory, Los Alamos, NM, USA
Related authors
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Benjamin Mark Sanderson, Ben B. B. Booth, John Dunne, Veronika Eyring, Rosie A. Fisher, Pierre Friedlingstein, Matthew J. Gidden, Tomohiro Hajima, Chris D. Jones, Colin Jones, Andrew King, Charles D. Koven, David M. Lawrence, Jason Lowe, Nadine Mengis, Glen P. Peters, Joeri Rogelj, Chris Smith, Abigail C. Snyder, Isla R. Simpson, Abigail L. S. Swann, Claudia Tebaldi, Tatiana Ilyina, Carl-Friedrich Schleussner, Roland Seferian, Bjørn Hallvard Samset, Detlef van Vuuren, and Sönke Zaehle
EGUsphere, https://doi.org/10.5194/egusphere-2023-2127, https://doi.org/10.5194/egusphere-2023-2127, 2023
Short summary
Short summary
We discuss how, in order to provide more relevant guidance for climate policy, coordinated climate experiments should adopt a greater focus on simulations where Earth System Models are provided with carbon emissions from fossil fuels together with land use change instructions, rather than past approaches which have largely focussed on experiments with prescribed atmospheric carbon dioxide concentrations. We highlight the technical feasibility of achieving these simulations in coming years.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
Short summary
Short summary
We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Lingcheng Li, Yilin Fang, Zhonghua Zheng, Mingjie Shi, Marcos Longo, Charles D. Koven, Jennifer A. Holm, Rosie A. Fisher, Nate G. McDowell, Jeffrey Chambers, and L. Ruby Leung
Geosci. Model Dev., 16, 4017–4040, https://doi.org/10.5194/gmd-16-4017-2023, https://doi.org/10.5194/gmd-16-4017-2023, 2023
Short summary
Short summary
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Yilin Fang, L. Ruby Leung, Charles D. Koven, Gautam Bisht, Matteo Detto, Yanyan Cheng, Nate McDowell, Helene Muller-Landau, S. Joseph Wright, and Jeffrey Q. Chambers
Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, https://doi.org/10.5194/gmd-15-7879-2022, 2022
Short summary
Short summary
We develop a model that integrates an Earth system model with a three-dimensional hydrology model to explicitly resolve hillslope topography and water flow underneath the land surface to understand how local-scale hydrologic processes modulate vegetation along water availability gradients. Our coupled model can be used to improve the understanding of the diverse impact of local heterogeneity and water flux on nutrient availability and plant communities.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Charles D. Koven, Vivek K. Arora, Patricia Cadule, Rosie A. Fisher, Chris D. Jones, David M. Lawrence, Jared Lewis, Keith Lindsay, Sabine Mathesius, Malte Meinshausen, Michael Mills, Zebedee Nicholls, Benjamin M. Sanderson, Roland Séférian, Neil C. Swart, William R. Wieder, and Kirsten Zickfeld
Earth Syst. Dynam., 13, 885–909, https://doi.org/10.5194/esd-13-885-2022, https://doi.org/10.5194/esd-13-885-2022, 2022
Short summary
Short summary
We explore the long-term dynamics of Earth's climate and carbon cycles under a pair of contrasting scenarios to the year 2300 using six models that include both climate and carbon cycle dynamics. One scenario assumes very high emissions, while the second assumes a peak in emissions, followed by rapid declines to net negative emissions. We show that the models generally agree that warming is roughly proportional to carbon emissions but that many other aspects of the model projections differ.
Benjamin M. Sanderson, Angeline G. Pendergrass, Charles D. Koven, Florent Brient, Ben B. B. Booth, Rosie A. Fisher, and Reto Knutti
Earth Syst. Dynam., 12, 899–918, https://doi.org/10.5194/esd-12-899-2021, https://doi.org/10.5194/esd-12-899-2021, 2021
Short summary
Short summary
Emergent constraints promise a pathway to the reduction in climate projection uncertainties by exploiting ensemble relationships between observable quantities and unknown climate response parameters. This study considers the robustness of these relationships in light of biases and common simplifications that may be present in the original ensemble of climate simulations. We propose a classification scheme for constraints and a number of practical case studies.
Polly C. Buotte, Charles D. Koven, Chonggang Xu, Jacquelyn K. Shuman, Michael L. Goulden, Samuel Levis, Jessica Katz, Junyan Ding, Wu Ma, Zachary Robbins, and Lara M. Kueppers
Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, https://doi.org/10.5194/bg-18-4473-2021, 2021
Short summary
Short summary
We present an approach for ensuring the definitions of plant types in dynamic vegetation models are connected to the underlying ecological processes controlling community composition. Our approach can be applied regionally or globally. Robust resolution of community composition will allow us to use these models to address important questions related to future climate and management effects on plant community composition, structure, carbon storage, and feedbacks within the Earth system.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
Short summary
Short summary
We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Vivek K. Arora, Anna Katavouta, Richard G. Williams, Chris D. Jones, Victor Brovkin, Pierre Friedlingstein, Jörg Schwinger, Laurent Bopp, Olivier Boucher, Patricia Cadule, Matthew A. Chamberlain, James R. Christian, Christine Delire, Rosie A. Fisher, Tomohiro Hajima, Tatiana Ilyina, Emilie Joetzjer, Michio Kawamiya, Charles D. Koven, John P. Krasting, Rachel M. Law, David M. Lawrence, Andrew Lenton, Keith Lindsay, Julia Pongratz, Thomas Raddatz, Roland Séférian, Kaoru Tachiiri, Jerry F. Tjiputra, Andy Wiltshire, Tongwen Wu, and Tilo Ziehn
Biogeosciences, 17, 4173–4222, https://doi.org/10.5194/bg-17-4173-2020, https://doi.org/10.5194/bg-17-4173-2020, 2020
Short summary
Short summary
Since the preindustrial period, land and ocean have taken up about half of the carbon emitted into the atmosphere by humans. Comparison of different earth system models with the carbon cycle allows us to assess how carbon uptake by land and ocean differs among models. This yields an estimate of uncertainty in our understanding of how land and ocean respond to increasing atmospheric CO2. This paper summarizes results from two such model intercomparison projects that use an idealized scenario.
Andrew H. MacDougall, Thomas L. Frölicher, Chris D. Jones, Joeri Rogelj, H. Damon Matthews, Kirsten Zickfeld, Vivek K. Arora, Noah J. Barrett, Victor Brovkin, Friedrich A. Burger, Micheal Eby, Alexey V. Eliseev, Tomohiro Hajima, Philip B. Holden, Aurich Jeltsch-Thömmes, Charles Koven, Nadine Mengis, Laurie Menviel, Martine Michou, Igor I. Mokhov, Akira Oka, Jörg Schwinger, Roland Séférian, Gary Shaffer, Andrei Sokolov, Kaoru Tachiiri, Jerry Tjiputra, Andrew Wiltshire, and Tilo Ziehn
Biogeosciences, 17, 2987–3016, https://doi.org/10.5194/bg-17-2987-2020, https://doi.org/10.5194/bg-17-2987-2020, 2020
Short summary
Short summary
The Zero Emissions Commitment (ZEC) is the change in global temperature expected to occur following the complete cessation of CO2 emissions. Here we use 18 climate models to assess the value of ZEC. For our experiment we find that ZEC 50 years after emissions cease is between −0.36 to +0.29 °C. The most likely value of ZEC is assessed to be close to zero. However, substantial continued warming for decades or centuries following cessation of CO2 emission cannot be ruled out.
Christian G. Andresen, David M. Lawrence, Cathy J. Wilson, A. David McGuire, Charles Koven, Kevin Schaefer, Elchin Jafarov, Shushi Peng, Xiaodong Chen, Isabelle Gouttevin, Eleanor Burke, Sarah Chadburn, Duoying Ji, Guangsheng Chen, Daniel Hayes, and Wenxin Zhang
The Cryosphere, 14, 445–459, https://doi.org/10.5194/tc-14-445-2020, https://doi.org/10.5194/tc-14-445-2020, 2020
Short summary
Short summary
Widely-used land models project near-surface drying of the terrestrial Arctic despite increases in the net water balance driven by climate change. Drying was generally associated with increases of active-layer depth and permafrost thaw in a warming climate. However, models lack important mechanisms such as thermokarst and soil subsidence that will change the hydrological regime and add to the large uncertainty in the future Arctic hydrological state and the associated permafrost carbon feedback.
Chris D. Jones, Thomas L. Frölicher, Charles Koven, Andrew H. MacDougall, H. Damon Matthews, Kirsten Zickfeld, Joeri Rogelj, Katarzyna B. Tokarska, Nathan P. Gillett, Tatiana Ilyina, Malte Meinshausen, Nadine Mengis, Roland Séférian, Michael Eby, and Friedrich A. Burger
Geosci. Model Dev., 12, 4375–4385, https://doi.org/10.5194/gmd-12-4375-2019, https://doi.org/10.5194/gmd-12-4375-2019, 2019
Short summary
Short summary
Global warming is simply related to the total emission of CO2 allowing us to define a carbon budget. However, information on the Zero Emissions Commitment is a key missing link to assess remaining carbon budgets to achieve the climate targets of the Paris Agreement. It was therefore decided that a small targeted MIP activity to fill this knowledge gap would be extremely valuable. This article formalises the experimental design alongside the other CMIP6 documentation papers.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
Short summary
Short summary
We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
Jennifer W. Harden, Jonathan A. O'Donnell, Katherine A. Heckman, Benjamin N. Sulman, Charles D. Koven, Chien-Lu Ping, and Gary J. Michaelson
SOIL Discuss., https://doi.org/10.5194/soil-2018-41, https://doi.org/10.5194/soil-2018-41, 2019
Revised manuscript not accepted
Short summary
Short summary
We examined changes in soil carbon (C) associated with permafrost thaw, warming, and ecosystem shifts using a space-for-time study. Soil C turnover was estimated for soil C fractions using soil C and radiocarbon data. Observations informed a simple model to track soil C change over time. Both losses and gains of soil C occur in the profile due to shifts in C among density-separated fractions. Thawing initially resulted in C gains to mineral soil and eventually C losses as warming persists.
Ashehad A. Ali, Yuanchao Fan, Marife D. Corre, Martyna M. Kotowska, Evelyn Hassler, Fernando E. Moyano, Christian Stiegler, Alexander Röll, Ana Meijide, Andre Ringeler, Christoph Leuschner, Tania June, Suria Tarigan, Holger Kreft, Dirk Hölscher, Chonggang Xu, Charles D. Koven, Rosie Fisher, Edzo Veldkamp, and Alexander Knohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2018-236, https://doi.org/10.5194/gmd-2018-236, 2018
Revised manuscript not accepted
Short summary
Short summary
We used carbon-use and water-use related datasets of small-holder rubber plantations from Jambi province, Indonesia to develop and calibrate a rubber plant functional type for the Community Land Model (CLM-rubber). Increased sensitivity of stomata to soil water stress and enhanced respiration costs enabled the model to capture the magnitude of transpiration and leaf area index. Including temporal variations in leaf life span enabled the model to better capture the seasonality of leaf litterfall.
Xiyan Xu, William J. Riley, Charles D. Koven, and Gensuo Jia
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-257, https://doi.org/10.5194/bg-2018-257, 2018
Preprint withdrawn
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
Short summary
Short summary
Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
Wei Li, Philippe Ciais, Shushi Peng, Chao Yue, Yilong Wang, Martin Thurner, Sassan S. Saatchi, Almut Arneth, Valerio Avitabile, Nuno Carvalhais, Anna B. Harper, Etsushi Kato, Charles Koven, Yi Y. Liu, Julia E.M.S. Nabel, Yude Pan, Julia Pongratz, Benjamin Poulter, Thomas A. M. Pugh, Maurizio Santoro, Stephen Sitch, Benjamin D. Stocker, Nicolas Viovy, Andy Wiltshire, Rasoul Yousefpour, and Sönke Zaehle
Biogeosciences, 14, 5053–5067, https://doi.org/10.5194/bg-14-5053-2017, https://doi.org/10.5194/bg-14-5053-2017, 2017
Short summary
Short summary
We used several observation-based biomass datasets to constrain the historical land-use change carbon emissions simulated by models. Compared to the range of the original modeled emissions (from 94 to 273 Pg C), the observationally constrained global cumulative emission estimate is 155 ± 50 Pg C (1σ Gaussian error) from 1901 to 2012. Our approach can also be applied to evaluate the LULCC impact of land-based climate mitigation policies.
Henrique F. Duarte, Brett M. Raczka, Daniel M. Ricciuto, John C. Lin, Charles D. Koven, Peter E. Thornton, David R. Bowling, Chun-Ta Lai, Kenneth J. Bible, and James R. Ehleringer
Biogeosciences, 14, 4315–4340, https://doi.org/10.5194/bg-14-4315-2017, https://doi.org/10.5194/bg-14-4315-2017, 2017
Short summary
Short summary
We evaluate the Community Land Model (CLM4.5) against observations at an old-growth coniferous forest site that is subjected to water stress each summer. We found that, after calibration, CLM was able to reasonably simulate the observed fluxes of energy and carbon, carbon stocks, carbon isotope ratios, and ecosystem response to water stress. This study demonstrates that carbon isotopes can expose structural weaknesses in CLM and provide a key constraint that may guide future model development.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
Short summary
Short summary
Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Andrew G. Slater, David M. Lawrence, and Charles D. Koven
The Cryosphere, 11, 989–996, https://doi.org/10.5194/tc-11-989-2017, https://doi.org/10.5194/tc-11-989-2017, 2017
Short summary
Short summary
This work defines a metric for evaluation of a specific model snow process, namely, heat transfer through snow into soil. Heat transfer through snow regulates the difference in air temperature versus soil temperature. Accurate representation of the snow heat transfer process is critically important for accurate representation of the current and future state of permafrost. Utilizing this metric, we can clearly identify models that can and cannot reasonably represent snow heat transfer.
Brett Raczka, Henrique F. Duarte, Charles D. Koven, Daniel Ricciuto, Peter E. Thornton, John C. Lin, and David R. Bowling
Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, https://doi.org/10.5194/bg-13-5183-2016, 2016
Short summary
Short summary
We use carbon isotopes of CO2 to improve the performance of a land surface model, a component with earth system climate models. We found that isotope observations can provide important information related to the exchange of carbon and water from vegetation driven by environmental stress from low atmospheric moisture and nitrogen limitation. It follows that isotopes have a unique potential to improve model performance and provide insight into land surface model development.
Fang Zhao, Ning Zeng, Ghassem Asrar, Pierre Friedlingstein, Akihiko Ito, Atul Jain, Eugenia Kalnay, Etsushi Kato, Charles D. Koven, Ben Poulter, Rashid Rafique, Stephen Sitch, Shijie Shu, Beni Stocker, Nicolas Viovy, Andy Wiltshire, and Sonke Zaehle
Biogeosciences, 13, 5121–5137, https://doi.org/10.5194/bg-13-5121-2016, https://doi.org/10.5194/bg-13-5121-2016, 2016
Short summary
Short summary
The increasing seasonality of atmospheric CO2 is strongly linked with enhanced land vegetation activities in the last 5 decades, for which the importance of increasing CO2, climate and land use/cover change was evaluated in single model studies (Zeng et al., 2014; Forkel et al., 2016). Here we examine the relative importance of these factors in multiple models. Our results highlight models can show similar results in some benchmarks with different underlying regional dynamics.
Xiyan Xu, William J. Riley, Charles D. Koven, Dave P. Billesbach, Rachel Y.-W. Chang, Róisín Commane, Eugénie S. Euskirchen, Sean Hartery, Yoshinobu Harazono, Hiroki Iwata, Kyle C. McDonald, Charles E. Miller, Walter C. Oechel, Benjamin Poulter, Naama Raz-Yaseef, Colm Sweeney, Margaret Torn, Steven C. Wofsy, Zhen Zhang, and Donatella Zona
Biogeosciences, 13, 5043–5056, https://doi.org/10.5194/bg-13-5043-2016, https://doi.org/10.5194/bg-13-5043-2016, 2016
Short summary
Short summary
Wetlands are the largest global natural methane source. Peat-rich bogs and fens lying between 50°N and 70°N contribute 10–30% to this source. The predictive capability of the seasonal methane cycle can directly affect the estimation of global methane budget. We present multiscale methane seasonal emission by observations and modeling and find that the uncertainties in predicting the seasonal methane emissions are from the wetland extent, cold-season CH4 production and CH4 transport processes.
Chris D. Jones, Vivek Arora, Pierre Friedlingstein, Laurent Bopp, Victor Brovkin, John Dunne, Heather Graven, Forrest Hoffman, Tatiana Ilyina, Jasmin G. John, Martin Jung, Michio Kawamiya, Charlie Koven, Julia Pongratz, Thomas Raddatz, James T. Randerson, and Sönke Zaehle
Geosci. Model Dev., 9, 2853–2880, https://doi.org/10.5194/gmd-9-2853-2016, https://doi.org/10.5194/gmd-9-2853-2016, 2016
Short summary
Short summary
How the carbon cycle interacts with climate will affect future climate change and how society plans emissions reductions to achieve climate targets. The Coupled Climate Carbon Cycle Model Intercomparison Project (C4MIP) is an endorsed activity of CMIP6 and aims to quantify these interactions and feedbacks in state-of-the-art climate models. This paper lays out the experimental protocol for modelling groups to follow to contribute to C4MIP. It is a contribution to the CMIP6 GMD Special Issue.
Wenli Wang, Annette Rinke, John C. Moore, Duoying Ji, Xuefeng Cui, Shushi Peng, David M. Lawrence, A. David McGuire, Eleanor J. Burke, Xiaodong Chen, Bertrand Decharme, Charles Koven, Andrew MacDougall, Kazuyuki Saito, Wenxin Zhang, Ramdane Alkama, Theodore J. Bohn, Philippe Ciais, Christine Delire, Isabelle Gouttevin, Tomohiro Hajima, Gerhard Krinner, Dennis P. Lettenmaier, Paul A. Miller, Benjamin Smith, Tetsuo Sueyoshi, and Artem B. Sherstiukov
The Cryosphere, 10, 1721–1737, https://doi.org/10.5194/tc-10-1721-2016, https://doi.org/10.5194/tc-10-1721-2016, 2016
Short summary
Short summary
The winter snow insulation is a key process for air–soil temperature coupling and is relevant for permafrost simulations. Differences in simulated air–soil temperature relationships and their modulation by climate conditions are found to be related to the snow model physics. Generally, models with better performance apply multilayer snow schemes.
W. Wang, A. Rinke, J. C. Moore, X. Cui, D. Ji, Q. Li, N. Zhang, C. Wang, S. Zhang, D. M. Lawrence, A. D. McGuire, W. Zhang, C. Delire, C. Koven, K. Saito, A. MacDougall, E. Burke, and B. Decharme
The Cryosphere, 10, 287–306, https://doi.org/10.5194/tc-10-287-2016, https://doi.org/10.5194/tc-10-287-2016, 2016
Short summary
Short summary
We use a model-ensemble approach for simulating permafrost on the Tibetan Plateau. We identify the uncertainties across models (state-of-the-art land surface models) and across methods (most commonly used methods to define permafrost).
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
S. Peng, P. Ciais, G. Krinner, T. Wang, I. Gouttevin, A. D. McGuire, D. Lawrence, E. Burke, X. Chen, B. Decharme, C. Koven, A. MacDougall, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, C. Delire, T. Hajima, D. Ji, D. P. Lettenmaier, P. A. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
The Cryosphere, 10, 179–192, https://doi.org/10.5194/tc-10-179-2016, https://doi.org/10.5194/tc-10-179-2016, 2016
Short summary
Short summary
Soil temperature change is a key indicator of the dynamics of permafrost. Using nine process-based ecosystem models with permafrost processes, a large spread of soil temperature trends across the models. Air temperature and longwave downward radiation are the main drivers of soil temperature trends. Based on an emerging observation constraint method, the total boreal near-surface permafrost area decrease comprised between 39 ± 14 × 103 and 75 ± 14 × 103 km2 yr−1 from 1960 to 2000.
Q. Zhu, W. J. Riley, J. Tang, and C. D. Koven
Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, https://doi.org/10.5194/bg-13-341-2016, 2016
Short summary
Short summary
Here we develop, calibrate, and test a nutrient competition model that accounts for multiple soil nutrients interacting with multiple biotic and abiotic consumers based on enzyme kinetics theory. Our model provides an ecologically consistent representation of nutrient competition appropriate for land biogeochemical models integrated in Earth system models.
G. Murray-Tortarolo, P. Friedlingstein, S. Sitch, V. J. Jaramillo, F. Murguía-Flores, A. Anav, Y. Liu, A. Arneth, A. Arvanitis, A. Harper, A. Jain, E. Kato, C. Koven, B. Poulter, B. D. Stocker, A. Wiltshire, S. Zaehle, and N. Zeng
Biogeosciences, 13, 223–238, https://doi.org/10.5194/bg-13-223-2016, https://doi.org/10.5194/bg-13-223-2016, 2016
Short summary
Short summary
We modelled the carbon (C) cycle in Mexico for three different time periods: past (20th century), present (2000-2005) and future (2006-2100). We used different available products to estimate C stocks and fluxes in the country. Contrary to other current estimates, our results showed that Mexico was a C sink and this is likely to continue in the next century (unless the most extreme climate-change scenarios are reached).
C. Le Quéré, R. Moriarty, R. M. Andrew, J. G. Canadell, S. Sitch, J. I. Korsbakken, P. Friedlingstein, G. P. Peters, R. J. Andres, T. A. Boden, R. A. Houghton, J. I. House, R. F. Keeling, P. Tans, A. Arneth, D. C. E. Bakker, L. Barbero, L. Bopp, J. Chang, F. Chevallier, L. P. Chini, P. Ciais, M. Fader, R. A. Feely, T. Gkritzalis, I. Harris, J. Hauck, T. Ilyina, A. K. Jain, E. Kato, V. Kitidis, K. Klein Goldewijk, C. Koven, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. Lenton, I. D. Lima, N. Metzl, F. Millero, D. R. Munro, A. Murata, J. E. M. S. Nabel, S. Nakaoka, Y. Nojiri, K. O'Brien, A. Olsen, T. Ono, F. F. Pérez, B. Pfeil, D. Pierrot, B. Poulter, G. Rehder, C. Rödenbeck, S. Saito, U. Schuster, J. Schwinger, R. Séférian, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, I. T. van der Laan-Luijkx, G. R. van der Werf, S. van Heuven, D. Vandemark, N. Viovy, A. Wiltshire, S. Zaehle, and N. Zeng
Earth Syst. Sci. Data, 7, 349–396, https://doi.org/10.5194/essd-7-349-2015, https://doi.org/10.5194/essd-7-349-2015, 2015
Short summary
Short summary
Accurate assessment of anthropogenic carbon dioxide emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to understand the global carbon cycle, support the development of climate policies, and project future climate change. We describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on a range of data and models and their interpretation by a broad scientific community.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
Short summary
Short summary
Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
M. A. Rawlins, A. D. McGuire, J. S. Kimball, P. Dass, D. Lawrence, E. Burke, X. Chen, C. Delire, C. Koven, A. MacDougall, S. Peng, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, P. Ciais, B. Decharme, I. Gouttevin, T. Hajima, D. Ji, G. Krinner, D. P. Lettenmaier, P. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
Biogeosciences, 12, 4385–4405, https://doi.org/10.5194/bg-12-4385-2015, https://doi.org/10.5194/bg-12-4385-2015, 2015
Short summary
Short summary
We used outputs from nine models to better understand land-atmosphere CO2 exchanges across Northern Eurasia over the period 1960-1990. Model estimates were assessed against independent ground and satellite measurements. We find that the models show a weakening of the CO2 sink over time; the models tend to overestimate respiration, causing an underestimate in NEP; the model range in regional NEP is twice the multimodel mean. Residence time for soil carbon decreased, amid a gain in carbon storage.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
Short summary
Short summary
Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
G. Hugelius, J. Strauss, S. Zubrzycki, J. W. Harden, E. A. G. Schuur, C.-L. Ping, L. Schirrmeister, G. Grosse, G. J. Michaelson, C. D. Koven, J. A. O'Donnell, B. Elberling, U. Mishra, P. Camill, Z. Yu, J. Palmtag, and P. Kuhry
Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, https://doi.org/10.5194/bg-11-6573-2014, 2014
Short summary
Short summary
This study provides an updated estimate of organic carbon stored in the northern permafrost region. The study includes estimates for carbon in soils (0 to 3 m depth) and deeper sediments in river deltas and the Yedoma region. We find that field data is still scarce from many regions. Total estimated carbon storage is ~1300 Pg with an uncertainty range of between 1100 and 1500 Pg. Around 800 Pg carbon is perennially frozen, equivalent to all carbon dioxide currently in the Earth's atmosphere.
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
G. Hugelius, J. G. Bockheim, P. Camill, B. Elberling, G. Grosse, J. W. Harden, K. Johnson, T. Jorgenson, C. D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E. A. G. Schuur, Y. Sheng, L. C. Smith, J. Strauss, and Z. Yu
Earth Syst. Sci. Data, 5, 393–402, https://doi.org/10.5194/essd-5-393-2013, https://doi.org/10.5194/essd-5-393-2013, 2013
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
J. Y. Tang, W. J. Riley, C. D. Koven, and Z. M. Subin
Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, https://doi.org/10.5194/gmd-6-127-2013, 2013
James A. King, James Weber, Peter Lawrence, Stephanie Roe, Abigail L. S. Swann, and Maria Val Martin
Biogeosciences, 21, 3883–3902, https://doi.org/10.5194/bg-21-3883-2024, https://doi.org/10.5194/bg-21-3883-2024, 2024
Short summary
Short summary
Tackling climate change by adding, restoring, or enhancing forests is gaining global support. However, it is important to investigate the broader implications of this. We used a computer model of the Earth to investigate a future where tree cover expanded as much as possible. We found that some tropical areas were cooler because of trees pumping water into the atmosphere, but this also led to soil and rivers drying. This is important because it might be harder to maintain forests as a result.
Mingjie Shi, Nate McDowell, Huilin Huang, Faria Zahura, Lingcheng Li, and Xingyuan Chen
EGUsphere, https://doi.org/10.22541/au.171053013.30286044/v2, https://doi.org/10.22541/au.171053013.30286044/v2, 2024
Short summary
Short summary
Using Moderate Resolution Imaging Spectroradiometer data products, we quantitatively estimate the resistance and resilience of ecosystem functions to wildfires that occurred in the Columbia River Basin in 2015. Carbon state exhibits lower resistance and resilience than the ecosystem fluxes. The random forest feature importance analysis indicates that burn severity plays a minor role in the resilience of grassland, while it has a relatively major role in the resilience of forest and savanna.
Jacquelyn K. Shuman, Rosie A. Fisher, Charles Koven, Ryan Knox, Lara Kueppers, and Chonggang Xu
Geosci. Model Dev., 17, 4643–4671, https://doi.org/10.5194/gmd-17-4643-2024, https://doi.org/10.5194/gmd-17-4643-2024, 2024
Short summary
Short summary
We adapt a fire behavior and effects module for use in a size-structured vegetation demographic model to test how climate, fire regime, and fire-tolerance plant traits interact to determine the distribution of tropical forests and grasslands. Our model captures the connection between fire disturbance and plant fire-tolerance strategies in determining plant distribution and provides a useful tool for understanding the vulnerability of these areas under changing conditions across the tropics.
Fabio Ciulla and Charuleka Varadharajan
Hydrol. Earth Syst. Sci., 28, 1617–1651, https://doi.org/10.5194/hess-28-1617-2024, https://doi.org/10.5194/hess-28-1617-2024, 2024
Short summary
Short summary
We present a new method based on network science for unsupervised classification of large datasets and apply it to classify 9067 US catchments and 274 biophysical traits at multiple scales. We find that our trait-based approach produces catchment classes with distinct streamflow behavior and that spatial patterns emerge amongst pristine and human-impacted catchments. This method can be widely used beyond hydrology to identify patterns, reduce trait redundancy, and select representative sites.
James Stegen, Amy Burgin, Michelle Busch, Joshua Fisher, Joshua Ladau, Jenna Abrahamson, Lauren Kinsman-Costello, Li Li, Xingyuan Chen, Thibault Datry, Nate McDowell, Corianne Tatariw, Anna Braswell, Jillian Deines, Julia Guimond, Peter Regier, Kenton Rod, Edward Bam, Etienne Fluet-Chouinard, Inke Forbrich, Kristin Jaeger, Teri O'Meara, Tim Scheibe, Erin Seybold, Jon Sweetman, Jianqiu Zheng, Daniel Allen, Elizabeth Herndon, Beth Middleton, Scott Painter, Kevin Roche, Julianne Scamardo, Ross Vander Vorste, Kristin Boye, Ellen Wohl, Margaret Zimmer, Kelly Hondula, Maggi Laan, Anna Marshall, and Kaizad Patel
EGUsphere, https://doi.org/10.5194/egusphere-2024-98, https://doi.org/10.5194/egusphere-2024-98, 2024
Short summary
Short summary
The loss and gain of surface water (variable inundation) is a common process across Earth. Global change shifts variable inundation dynamics, highlighting a need for unified understanding that transcends individual variably inundated ecosystems (VIEs). We review literature, highlight challenges, and emphasize opportunities to generate transferable knowledge by viewing VIEs through a common lens. We aim to inspire the emergence of a cross-VIE community based on a proposed continuum approach.
Flossie Brown, Gerd Folberth, Stephen Sitch, Paulo Artaxo, Marijn Bauters, Pascal Boeckx, Alexander W. Cheesman, Matteo Detto, Ninong Komala, Luciana Rizzo, Nestor Rojas, Ines dos Santos Vieira, Steven Turnock, Hans Verbeeck, and Alfonso Zambrano
EGUsphere, https://doi.org/10.5194/egusphere-2023-2937, https://doi.org/10.5194/egusphere-2023-2937, 2024
Short summary
Short summary
Ozone is a pollutant that is detrimental to human and plant health. Ozone monitoring sites in the tropics are limited, so models are often used to assess ozone exposure. We use measurements from the tropics to evaluate ozone from the UK Earth system model, UKESM1. UKESM1 is able to capture the behaviour of ozone in the tropics, except in Southeast Asia. Results demonstrate that UKESM1 can be used for health assessments and highlights areas that would benefit from further observations.
Gab Abramowitz, Anna Ukkola, Sanaa Hobeichi, Jon Cranko Page, Mathew Lipson, Martin De Kauwe, Sam Green, Claire Brenner, Jonathan Frame, Grey Nearing, Martyn Clark, Martin Best, Peter Anthoni, Gabriele Arduini, Souhail Boussetta, Silvia Caldararu, Kyeungwoo Cho, Matthias Cuntz, David Fairbairn, Craig Ferguson, Hyungjun Kim, Yeonjoo Kim, Jürgen Knauer, David Lawrence, Xiangzhong Luo, Sergey Malyshev, Tomoko Nitta, Jerome Ogee, Keith Oleson, Catherine Ottlé, Phillipe Peylin, Patricia de Rosnay, Heather Rumbold, Bob Su, Nicolas Vuichard, Anthony Walker, Xiaoni Wang-Faivre, Yunfei Wang, and Yijian Zeng
EGUsphere, https://doi.org/10.5194/egusphere-2023-3084, https://doi.org/10.5194/egusphere-2023-3084, 2024
Short summary
Short summary
This paper evaluates land models – computer based models that simulate ecosystem dynamics, the land carbon, water and energy cycles and the role of land in the climate system. It uses machine learning / AI approaches to show that despite the complexity of land models, they do not perform nearly as well as they could, given the amount of information they are provided with about the prediction problem.
Benjamin Mark Sanderson, Ben B. B. Booth, John Dunne, Veronika Eyring, Rosie A. Fisher, Pierre Friedlingstein, Matthew J. Gidden, Tomohiro Hajima, Chris D. Jones, Colin Jones, Andrew King, Charles D. Koven, David M. Lawrence, Jason Lowe, Nadine Mengis, Glen P. Peters, Joeri Rogelj, Chris Smith, Abigail C. Snyder, Isla R. Simpson, Abigail L. S. Swann, Claudia Tebaldi, Tatiana Ilyina, Carl-Friedrich Schleussner, Roland Seferian, Bjørn Hallvard Samset, Detlef van Vuuren, and Sönke Zaehle
EGUsphere, https://doi.org/10.5194/egusphere-2023-2127, https://doi.org/10.5194/egusphere-2023-2127, 2023
Short summary
Short summary
We discuss how, in order to provide more relevant guidance for climate policy, coordinated climate experiments should adopt a greater focus on simulations where Earth System Models are provided with carbon emissions from fossil fuels together with land use change instructions, rather than past approaches which have largely focussed on experiments with prescribed atmospheric carbon dioxide concentrations. We highlight the technical feasibility of achieving these simulations in coming years.
Junyan Ding, Polly Buotte, Roger Bales, Bradley Christoffersen, Rosie A. Fisher, Michael Goulden, Ryan Knox, Lara Kueppers, Jacquelyn Shuman, Chonggang Xu, and Charles D. Koven
Biogeosciences, 20, 4491–4510, https://doi.org/10.5194/bg-20-4491-2023, https://doi.org/10.5194/bg-20-4491-2023, 2023
Short summary
Short summary
We used a vegetation model to investigate how the different combinations of plant rooting depths and the sensitivity of leaves and stems to drying lead to differential responses of a pine forest to drought conditions in California, USA. We found that rooting depths are the strongest control in that ecosystem. Deep roots allow trees to fully utilize the soil water during a normal year but result in prolonged depletion of soil moisture during a severe drought and hence a high tree mortality risk.
Chonggang Xu, Bradley Christoffersen, Zachary Robbins, Ryan Knox, Rosie A. Fisher, Rutuja Chitra-Tarak, Martijn Slot, Kurt Solander, Lara Kueppers, Charles Koven, and Nate McDowell
Geosci. Model Dev., 16, 6267–6283, https://doi.org/10.5194/gmd-16-6267-2023, https://doi.org/10.5194/gmd-16-6267-2023, 2023
Short summary
Short summary
We introduce a plant hydrodynamic model for the U.S. Department of Energy (DOE)-sponsored model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES). To better understand this new model system and its functionality in tropical forest ecosystems, we conducted a global parameter sensitivity analysis at Barro Colorado Island, Panama. We identified the key parameters that affect the simulated plant hydrodynamics to guide both modeling and field campaign studies.
Danica L. Lombardozzi, William R. Wieder, Negin Sobhani, Gordon B. Bonan, David Durden, Dawn Lenz, Michael SanClements, Samantha Weintraub-Leff, Edward Ayres, Christopher R. Florian, Kyla Dahlin, Sanjiv Kumar, Abigail L. S. Swann, Claire M. Zarakas, Charles Vardeman, and Valerio Pascucci
Geosci. Model Dev., 16, 5979–6000, https://doi.org/10.5194/gmd-16-5979-2023, https://doi.org/10.5194/gmd-16-5979-2023, 2023
Short summary
Short summary
We present a novel cyberinfrastructure system that uses National Ecological Observatory Network measurements to run Community Terrestrial System Model point simulations in a containerized system. The simple interface and tutorials expand access to data and models used in Earth system research by removing technical barriers and facilitating research, educational opportunities, and community engagement. The NCAR–NEON system enables convergence of climate and ecological sciences.
Allen G. Hunt, Muhammad Sahimi, Boris Faybishenko, Markus Egli, Zbigniew J. Kabala, Behzad Ghanbarian, and Fang Yu
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2023-21, https://doi.org/10.5194/esd-2023-21, 2023
Manuscript not accepted for further review
Short summary
Short summary
Relative stability of Earth’s climate system is considered an emergent property of coupled ecosystems. We apply a spatio-temporal scaling relation for root growth to couple bacterial/fungal/vegetational response to climate crises triggered by land plant invasion and predict an absolute time scale to reach homeostasis. The predicted time is 33 % larger than required for the biosphere to emerge from associated Paleozoic ice ages. We propose a basis for understanding the biosphere and critical zone.
Nathan Alec Conroy, Jeffrey M. Heikoop, Emma Lathrop, Dea Musa, Brent D. Newman, Chonggang Xu, Rachael E. McCaully, Carli A. Arendt, Verity G. Salmon, Amy Breen, Vladimir Romanovsky, Katrina E. Bennett, Cathy J. Wilson, and Stan D. Wullschleger
The Cryosphere, 17, 3987–4006, https://doi.org/10.5194/tc-17-3987-2023, https://doi.org/10.5194/tc-17-3987-2023, 2023
Short summary
Short summary
This study combines field observations, non-parametric statistical analyses, and thermodynamic modeling to characterize the environmental causes of the spatial variability in soil pore water solute concentrations across two Arctic catchments with varying extents of permafrost. Vegetation type, soil moisture and redox conditions, weathering and hydrologic transport, and mineral solubility were all found to be the primary drivers of the existing spatial variability of some soil pore water solutes.
Bo Qu, Alexandre Roy, Joe R. Melton, Jennifer L. Baltzer, Youngryel Ryu, Matteo Detto, and Oliver Sonnentag
EGUsphere, https://doi.org/10.5194/egusphere-2023-1167, https://doi.org/10.5194/egusphere-2023-1167, 2023
Preprint archived
Short summary
Short summary
Accurately simulating photosynthesis and evapotranspiration challenges terrestrial biosphere models across North America’s boreal biome, in part due to uncertain representation of the maximum rate of photosynthetic carboxylation (Vcmax). This study used forest stand scale observations in an optimization framework to improve Vcmax values for representative vegetation types. Several stand characteristics well explained spatial Vcmax variability and were useful to improve boreal forest modelling.
Lingcheng Li, Yilin Fang, Zhonghua Zheng, Mingjie Shi, Marcos Longo, Charles D. Koven, Jennifer A. Holm, Rosie A. Fisher, Nate G. McDowell, Jeffrey Chambers, and L. Ruby Leung
Geosci. Model Dev., 16, 4017–4040, https://doi.org/10.5194/gmd-16-4017-2023, https://doi.org/10.5194/gmd-16-4017-2023, 2023
Short summary
Short summary
Accurately modeling plant coexistence in vegetation demographic models like ELM-FATES is challenging. This study proposes a repeatable method that uses machine-learning-based surrogate models to optimize plant trait parameters in ELM-FATES. Our approach significantly improves plant coexistence modeling, thus reducing errors. It has important implications for modeling ecosystem dynamics in response to climate change.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
Short summary
Short summary
Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
Short summary
Short summary
Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Giacomo Grassi, Clemens Schwingshackl, Thomas Gasser, Richard A. Houghton, Stephen Sitch, Josep G. Canadell, Alessandro Cescatti, Philippe Ciais, Sandro Federici, Pierre Friedlingstein, Werner A. Kurz, Maria J. Sanz Sanchez, Raúl Abad Viñas, Ramdane Alkama, Selma Bultan, Guido Ceccherini, Stefanie Falk, Etsushi Kato, Daniel Kennedy, Jürgen Knauer, Anu Korosuo, Joana Melo, Matthew J. McGrath, Julia E. M. S. Nabel, Benjamin Poulter, Anna A. Romanovskaya, Simone Rossi, Hanqin Tian, Anthony P. Walker, Wenping Yuan, Xu Yue, and Julia Pongratz
Earth Syst. Sci. Data, 15, 1093–1114, https://doi.org/10.5194/essd-15-1093-2023, https://doi.org/10.5194/essd-15-1093-2023, 2023
Short summary
Short summary
Striking differences exist in estimates of land-use CO2 fluxes between the national greenhouse gas inventories and the IPCC assessment reports. These differences hamper an accurate assessment of the collective progress under the Paris Agreement. By implementing an approach that conceptually reconciles land-use CO2 flux from national inventories and the global models used by the IPCC, our study is an important step forward for increasing confidence in land-use CO2 flux estimates.
Elias C. Massoud, Lauren Andrews, Rolf Reichle, Andrea Molod, Jongmin Park, Sophie Ruehr, and Manuela Girotto
Earth Syst. Dynam., 14, 147–171, https://doi.org/10.5194/esd-14-147-2023, https://doi.org/10.5194/esd-14-147-2023, 2023
Short summary
Short summary
In this study, we benchmark the forecast skill of the NASA’s Goddard Earth Observing System subseasonal-to-seasonal (GEOS-S2S version 2) hydrometeorological forecasts in the High Mountain Asia (HMA) region. Hydrometeorological forecast skill is dependent on the forecast lead time, the memory of the variable within the physical system, and the validation dataset used. Overall, these results benchmark the GEOS-S2S system’s ability to forecast HMA hydrometeorology on the seasonal timescale.
Adrienne M. Wootten, Elias C. Massoud, Duane E. Waliser, and Huikyo Lee
Earth Syst. Dynam., 14, 121–145, https://doi.org/10.5194/esd-14-121-2023, https://doi.org/10.5194/esd-14-121-2023, 2023
Short summary
Short summary
Climate projections and multi-model ensemble weighting are increasingly used for climate assessments. This study examines the sensitivity of projections to multi-model ensemble weighting strategies in the south-central United States. Model weighting and ensemble means are sensitive to the domain and variable used. There are numerous findings regarding the improvement in skill with model weighting and the sensitivity associated with various strategies.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Luke Gregor, Judith Hauck, Corinne Le Quéré, Ingrid T. Luijkx, Are Olsen, Glen P. Peters, Wouter Peters, Julia Pongratz, Clemens Schwingshackl, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Simone R. Alin, Ramdane Alkama, Almut Arneth, Vivek K. Arora, Nicholas R. Bates, Meike Becker, Nicolas Bellouin, Henry C. Bittig, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Margot Cronin, Wiley Evans, Stefanie Falk, Richard A. Feely, Thomas Gasser, Marion Gehlen, Thanos Gkritzalis, Lucas Gloege, Giacomo Grassi, Nicolas Gruber, Özgür Gürses, Ian Harris, Matthew Hefner, Richard A. Houghton, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Atul K. Jain, Annika Jersild, Koji Kadono, Etsushi Kato, Daniel Kennedy, Kees Klein Goldewijk, Jürgen Knauer, Jan Ivar Korsbakken, Peter Landschützer, Nathalie Lefèvre, Keith Lindsay, Junjie Liu, Zhu Liu, Gregg Marland, Nicolas Mayot, Matthew J. McGrath, Nicolas Metzl, Natalie M. Monacci, David R. Munro, Shin-Ichiro Nakaoka, Yosuke Niwa, Kevin O'Brien, Tsuneo Ono, Paul I. Palmer, Naiqing Pan, Denis Pierrot, Katie Pocock, Benjamin Poulter, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Carmen Rodriguez, Thais M. Rosan, Jörg Schwinger, Roland Séférian, Jamie D. Shutler, Ingunn Skjelvan, Tobias Steinhoff, Qing Sun, Adrienne J. Sutton, Colm Sweeney, Shintaro Takao, Toste Tanhua, Pieter P. Tans, Xiangjun Tian, Hanqin Tian, Bronte Tilbrook, Hiroyuki Tsujino, Francesco Tubiello, Guido R. van der Werf, Anthony P. Walker, Rik Wanninkhof, Chris Whitehead, Anna Willstrand Wranne, Rebecca Wright, Wenping Yuan, Chao Yue, Xu Yue, Sönke Zaehle, Jiye Zeng, and Bo Zheng
Earth Syst. Sci. Data, 14, 4811–4900, https://doi.org/10.5194/essd-14-4811-2022, https://doi.org/10.5194/essd-14-4811-2022, 2022
Short summary
Short summary
The Global Carbon Budget 2022 describes the datasets and methodology used to quantify the anthropogenic emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, the land ecosystems, and the ocean. These living datasets are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Yilin Fang, L. Ruby Leung, Charles D. Koven, Gautam Bisht, Matteo Detto, Yanyan Cheng, Nate McDowell, Helene Muller-Landau, S. Joseph Wright, and Jeffrey Q. Chambers
Geosci. Model Dev., 15, 7879–7901, https://doi.org/10.5194/gmd-15-7879-2022, https://doi.org/10.5194/gmd-15-7879-2022, 2022
Short summary
Short summary
We develop a model that integrates an Earth system model with a three-dimensional hydrology model to explicitly resolve hillslope topography and water flow underneath the land surface to understand how local-scale hydrologic processes modulate vegetation along water availability gradients. Our coupled model can be used to improve the understanding of the diverse impact of local heterogeneity and water flux on nutrient availability and plant communities.
Yitong Yao, Emilie Joetzjer, Philippe Ciais, Nicolas Viovy, Fabio Cresto Aleina, Jerome Chave, Lawren Sack, Megan Bartlett, Patrick Meir, Rosie Fisher, and Sebastiaan Luyssaert
Geosci. Model Dev., 15, 7809–7833, https://doi.org/10.5194/gmd-15-7809-2022, https://doi.org/10.5194/gmd-15-7809-2022, 2022
Short summary
Short summary
To facilitate more mechanistic modeling of drought effects on forest dynamics, our study implements a hydraulic module to simulate the vertical water flow, change in water storage and percentage loss of stem conductance (PLC). With the relationship between PLC and tree mortality, our model can successfully reproduce the large biomass drop observed under throughfall exclusion. Our hydraulic module provides promising avenues benefiting the prediction for mortality under future drought events.
Yilin Fang, L. Ruby Leung, Ryan Knox, Charlie Koven, and Ben Bond-Lamberty
Geosci. Model Dev., 15, 6385–6398, https://doi.org/10.5194/gmd-15-6385-2022, https://doi.org/10.5194/gmd-15-6385-2022, 2022
Short summary
Short summary
Accounting for water movement in the soil and water transport within the plant is important for plant growth in Earth system modeling. We implemented different numerical approaches for a plant hydrodynamic model and compared their impacts on the simulated aboveground biomass (AGB) at single points and globally. We found care should be taken when discretizing the number of soil layers for numerical simulations as it can significantly affect AGB if accuracy and computational costs are of concern.
Qianyu Li, Shawn P. Serbin, Julien Lamour, Kenneth J. Davidson, Kim S. Ely, and Alistair Rogers
Geosci. Model Dev., 15, 4313–4329, https://doi.org/10.5194/gmd-15-4313-2022, https://doi.org/10.5194/gmd-15-4313-2022, 2022
Short summary
Short summary
Stomatal conductance is the rate of water release from leaves’ pores. We implemented an optimal stomatal conductance model in a vegetation model. We then tested and compared it with the existing empirical model in terms of model responses to key environmental variables. We also evaluated the model with measurements at a tropical forest site. Our study suggests that the parameterization of conductance models and current model response to drought are the critical areas for improving models.
Charles D. Koven, Vivek K. Arora, Patricia Cadule, Rosie A. Fisher, Chris D. Jones, David M. Lawrence, Jared Lewis, Keith Lindsay, Sabine Mathesius, Malte Meinshausen, Michael Mills, Zebedee Nicholls, Benjamin M. Sanderson, Roland Séférian, Neil C. Swart, William R. Wieder, and Kirsten Zickfeld
Earth Syst. Dynam., 13, 885–909, https://doi.org/10.5194/esd-13-885-2022, https://doi.org/10.5194/esd-13-885-2022, 2022
Short summary
Short summary
We explore the long-term dynamics of Earth's climate and carbon cycles under a pair of contrasting scenarios to the year 2300 using six models that include both climate and carbon cycle dynamics. One scenario assumes very high emissions, while the second assumes a peak in emissions, followed by rapid declines to net negative emissions. We show that the models generally agree that warming is roughly proportional to carbon emissions but that many other aspects of the model projections differ.
Hamze Dokoohaki, Bailey D. Morrison, Ann Raiho, Shawn P. Serbin, Katie Zarada, Luke Dramko, and Michael Dietze
Geosci. Model Dev., 15, 3233–3252, https://doi.org/10.5194/gmd-15-3233-2022, https://doi.org/10.5194/gmd-15-3233-2022, 2022
Short summary
Short summary
We present a new terrestrial carbon cycle data assimilation system, built on the PEcAn model–data eco-informatics system, and its application for the development of a proof-of-concept carbon
reanalysisproduct that harmonizes carbon pools (leaf, wood, soil) and fluxes (GPP, Ra, Rh, NEE) across the contiguous United States from 1986–2019. Here, we build on a decade of work on uncertainty propagation to generate the most complete and robust uncertainty accounting available to date.
Elias C. Massoud, A. Anthony Bloom, Marcos Longo, John T. Reager, Paul A. Levine, and John R. Worden
Hydrol. Earth Syst. Sci., 26, 1407–1423, https://doi.org/10.5194/hess-26-1407-2022, https://doi.org/10.5194/hess-26-1407-2022, 2022
Short summary
Short summary
The water balance on river basin scales depends on a number of soil physical processes. Gaining information on these quantities using observations is a key step toward improving the skill of land surface hydrology models. In this study, we use data from the Gravity Recovery and Climate Experiment (NASA-GRACE) to inform and constrain these hydrologic processes. We show that our model is able to simulate the land hydrologic cycle for a watershed in the Amazon from January 2003 to December 2012.
Raquel Fernandes Araujo, Samuel Grubinger, Carlos Henrique Souza Celes, Robinson I. Negrón-Juárez, Milton Garcia, Jonathan P. Dandois, and Helene C. Muller-Landau
Biogeosciences, 18, 6517–6531, https://doi.org/10.5194/bg-18-6517-2021, https://doi.org/10.5194/bg-18-6517-2021, 2021
Short summary
Short summary
Our study contributed to improving the understanding of temporal variation and climate correlates of canopy disturbances mainly caused by treefalls and branchfalls. We used a unique dataset of 5 years of approximately monthly drone-acquired RGB (red–green–blue) imagery for 50 ha of mature tropical forest on Barro Colorado Island, Panama. We found that canopy disturbance rates were highly temporally variable, were higher in the wet season, and were related to extreme rainfall events.
Lina Teckentrup, Martin G. De Kauwe, Andrew J. Pitman, Daniel S. Goll, Vanessa Haverd, Atul K. Jain, Emilie Joetzjer, Etsushi Kato, Sebastian Lienert, Danica Lombardozzi, Patrick C. McGuire, Joe R. Melton, Julia E. M. S. Nabel, Julia Pongratz, Stephen Sitch, Anthony P. Walker, and Sönke Zaehle
Biogeosciences, 18, 5639–5668, https://doi.org/10.5194/bg-18-5639-2021, https://doi.org/10.5194/bg-18-5639-2021, 2021
Short summary
Short summary
The Australian continent is included in global assessments of the carbon cycle such as the global carbon budget, yet the performance of dynamic global vegetation models (DGVMs) over Australia has rarely been evaluated. We assessed simulations by an ensemble of dynamic global vegetation models over Australia and highlighted a number of key areas that lead to model divergence on both short (inter-annual) and long (decadal) timescales.
Benjamin M. Sanderson, Angeline G. Pendergrass, Charles D. Koven, Florent Brient, Ben B. B. Booth, Rosie A. Fisher, and Reto Knutti
Earth Syst. Dynam., 12, 899–918, https://doi.org/10.5194/esd-12-899-2021, https://doi.org/10.5194/esd-12-899-2021, 2021
Short summary
Short summary
Emergent constraints promise a pathway to the reduction in climate projection uncertainties by exploiting ensemble relationships between observable quantities and unknown climate response parameters. This study considers the robustness of these relationships in light of biases and common simplifications that may be present in the original ensemble of climate simulations. We propose a classification scheme for constraints and a number of practical case studies.
Polly C. Buotte, Charles D. Koven, Chonggang Xu, Jacquelyn K. Shuman, Michael L. Goulden, Samuel Levis, Jessica Katz, Junyan Ding, Wu Ma, Zachary Robbins, and Lara M. Kueppers
Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, https://doi.org/10.5194/bg-18-4473-2021, 2021
Short summary
Short summary
We present an approach for ensuring the definitions of plant types in dynamic vegetation models are connected to the underlying ecological processes controlling community composition. Our approach can be applied regionally or globally. Robust resolution of community composition will allow us to use these models to address important questions related to future climate and management effects on plant community composition, structure, carbon storage, and feedbacks within the Earth system.
Wu Ma, Lu Zhai, Alexandria Pivovaroff, Jacquelyn Shuman, Polly Buotte, Junyan Ding, Bradley Christoffersen, Ryan Knox, Max Moritz, Rosie A. Fisher, Charles D. Koven, Lara Kueppers, and Chonggang Xu
Biogeosciences, 18, 4005–4020, https://doi.org/10.5194/bg-18-4005-2021, https://doi.org/10.5194/bg-18-4005-2021, 2021
Short summary
Short summary
We use a hydrodynamic demographic vegetation model to estimate live fuel moisture dynamics of chaparral shrubs, a dominant vegetation type in fire-prone southern California. Our results suggest that multivariate climate change could cause a significant net reduction in live fuel moisture and thus exacerbate future wildfire danger in chaparral shrub systems.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
Short summary
Short summary
Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Wolfgang A. Obermeier, Julia E. M. S. Nabel, Tammas Loughran, Kerstin Hartung, Ana Bastos, Felix Havermann, Peter Anthoni, Almut Arneth, Daniel S. Goll, Sebastian Lienert, Danica Lombardozzi, Sebastiaan Luyssaert, Patrick C. McGuire, Joe R. Melton, Benjamin Poulter, Stephen Sitch, Michael O. Sullivan, Hanqin Tian, Anthony P. Walker, Andrew J. Wiltshire, Soenke Zaehle, and Julia Pongratz
Earth Syst. Dynam., 12, 635–670, https://doi.org/10.5194/esd-12-635-2021, https://doi.org/10.5194/esd-12-635-2021, 2021
Short summary
Short summary
We provide the first spatio-temporally explicit comparison of different model-derived fluxes from land use and land cover changes (fLULCCs) by using the TRENDY v8 dynamic global vegetation models used in the 2019 global carbon budget. We find huge regional fLULCC differences resulting from environmental assumptions, simulated periods, and the timing of land use and land cover changes, and we argue for a method consistent across time and space and for carefully choosing the accounting period.
Alexey N. Shiklomanov, Michael C. Dietze, Istem Fer, Toni Viskari, and Shawn P. Serbin
Geosci. Model Dev., 14, 2603–2633, https://doi.org/10.5194/gmd-14-2603-2021, https://doi.org/10.5194/gmd-14-2603-2021, 2021
Short summary
Short summary
Airborne and satellite images are a great resource for calibrating and evaluating computer models of ecosystems. Typically, researchers derive ecosystem properties from these images and then compare models against these derived properties. Here, we present an alternative approach where we modify a model to predict what the satellite would see more directly. We then show how this approach can be used to calibrate model parameters using airborne data from forest sites in the northeastern US.
Kathryn I. Wheeler and Michael C. Dietze
Biogeosciences, 18, 1971–1985, https://doi.org/10.5194/bg-18-1971-2021, https://doi.org/10.5194/bg-18-1971-2021, 2021
Short summary
Short summary
Monitoring leaf phenology (i.e., seasonality) allows for tracking the progression of climate change and seasonal variations in a variety of organismal and ecosystem processes. Recent versions of the Geostationary Operational Environmental Satellites allow for the monitoring of a phenological-sensitive index at a high temporal frequency (5–10 min) throughout most of the western hemisphere. Here we show the high potential of these new data to measure the phenology of deciduous forests.
Xiaoying Shi, Daniel M. Ricciuto, Peter E. Thornton, Xiaofeng Xu, Fengming Yuan, Richard J. Norby, Anthony P. Walker, Jeffrey M. Warren, Jiafu Mao, Paul J. Hanson, Lin Meng, David Weston, and Natalie A. Griffiths
Biogeosciences, 18, 467–486, https://doi.org/10.5194/bg-18-467-2021, https://doi.org/10.5194/bg-18-467-2021, 2021
Short summary
Short summary
The Sphagnum mosses are the important species of a wetland ecosystem. To better represent the peatland ecosystem, we introduced the moss species to the land model component (ELM) of the Energy Exascale Earth System Model (E3SM) by developing water content dynamics and nonvascular photosynthetic processes for moss. We tested the model against field observations and used the model to make projections of the site's carbon cycle under warming and atmospheric CO2 concentration scenarios.
Katherine Dagon, Benjamin M. Sanderson, Rosie A. Fisher, and David M. Lawrence
Adv. Stat. Clim. Meteorol. Oceanogr., 6, 223–244, https://doi.org/10.5194/ascmo-6-223-2020, https://doi.org/10.5194/ascmo-6-223-2020, 2020
Short summary
Short summary
Uncertainties in land model projections are important to understand in order to build confidence in Earth system modeling. In this paper, we introduce a framework for estimating uncertain land model parameters with machine learning. This method increases the computational efficiency of this process relative to traditional hand tuning approaches and provides objective methods to assess the results. We further identify key processes and parameters that are important for accurate land modeling.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Judith Hauck, Are Olsen, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Corinne Le Quéré, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Simone Alin, Luiz E. O. C. Aragão, Almut Arneth, Vivek Arora, Nicholas R. Bates, Meike Becker, Alice Benoit-Cattin, Henry C. Bittig, Laurent Bopp, Selma Bultan, Naveen Chandra, Frédéric Chevallier, Louise P. Chini, Wiley Evans, Liesbeth Florentie, Piers M. Forster, Thomas Gasser, Marion Gehlen, Dennis Gilfillan, Thanos Gkritzalis, Luke Gregor, Nicolas Gruber, Ian Harris, Kerstin Hartung, Vanessa Haverd, Richard A. Houghton, Tatiana Ilyina, Atul K. Jain, Emilie Joetzjer, Koji Kadono, Etsushi Kato, Vassilis Kitidis, Jan Ivar Korsbakken, Peter Landschützer, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Zhu Liu, Danica Lombardozzi, Gregg Marland, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Yosuke Niwa, Kevin O'Brien, Tsuneo Ono, Paul I. Palmer, Denis Pierrot, Benjamin Poulter, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Adam J. P. Smith, Adrienne J. Sutton, Toste Tanhua, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Guido van der Werf, Nicolas Vuichard, Anthony P. Walker, Rik Wanninkhof, Andrew J. Watson, David Willis, Andrew J. Wiltshire, Wenping Yuan, Xu Yue, and Sönke Zaehle
Earth Syst. Sci. Data, 12, 3269–3340, https://doi.org/10.5194/essd-12-3269-2020, https://doi.org/10.5194/essd-12-3269-2020, 2020
Short summary
Short summary
The Global Carbon Budget 2020 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Robinson I. Negrón-Juárez, Jennifer A. Holm, Boris Faybishenko, Daniel Magnabosco-Marra, Rosie A. Fisher, Jacquelyn K. Shuman, Alessandro C. de Araujo, William J. Riley, and Jeffrey Q. Chambers
Biogeosciences, 17, 6185–6205, https://doi.org/10.5194/bg-17-6185-2020, https://doi.org/10.5194/bg-17-6185-2020, 2020
Short summary
Short summary
The temporal variability in the Landsat satellite near-infrared (NIR) band captured the dynamics of forest regrowth after disturbances in Central Amazon. This variability was represented by the dynamics of forest regrowth after disturbances were properly represented by the ELM-FATES model (Functionally Assembled Terrestrial Ecosystem Simulator (FATES) in the Energy Exascale Earth System Model (E3SM) Land Model (ELM)).
Maoyi Huang, Yi Xu, Marcos Longo, Michael Keller, Ryan G. Knox, Charles D. Koven, and Rosie A. Fisher
Biogeosciences, 17, 4999–5023, https://doi.org/10.5194/bg-17-4999-2020, https://doi.org/10.5194/bg-17-4999-2020, 2020
Short summary
Short summary
The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is enhanced to mimic the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events; determine the survivorship of cohorts in the disturbed forest; and modifying the biomass, coarse woody debris, and litter pools. This study lays the foundation to simulate land use change and forest degradation in FATES as part of an Earth system model.
Vivek K. Arora, Anna Katavouta, Richard G. Williams, Chris D. Jones, Victor Brovkin, Pierre Friedlingstein, Jörg Schwinger, Laurent Bopp, Olivier Boucher, Patricia Cadule, Matthew A. Chamberlain, James R. Christian, Christine Delire, Rosie A. Fisher, Tomohiro Hajima, Tatiana Ilyina, Emilie Joetzjer, Michio Kawamiya, Charles D. Koven, John P. Krasting, Rachel M. Law, David M. Lawrence, Andrew Lenton, Keith Lindsay, Julia Pongratz, Thomas Raddatz, Roland Séférian, Kaoru Tachiiri, Jerry F. Tjiputra, Andy Wiltshire, Tongwen Wu, and Tilo Ziehn
Biogeosciences, 17, 4173–4222, https://doi.org/10.5194/bg-17-4173-2020, https://doi.org/10.5194/bg-17-4173-2020, 2020
Short summary
Short summary
Since the preindustrial period, land and ocean have taken up about half of the carbon emitted into the atmosphere by humans. Comparison of different earth system models with the carbon cycle allows us to assess how carbon uptake by land and ocean differs among models. This yields an estimate of uncertainty in our understanding of how land and ocean respond to increasing atmospheric CO2. This paper summarizes results from two such model intercomparison projects that use an idealized scenario.
Andrew H. MacDougall, Thomas L. Frölicher, Chris D. Jones, Joeri Rogelj, H. Damon Matthews, Kirsten Zickfeld, Vivek K. Arora, Noah J. Barrett, Victor Brovkin, Friedrich A. Burger, Micheal Eby, Alexey V. Eliseev, Tomohiro Hajima, Philip B. Holden, Aurich Jeltsch-Thömmes, Charles Koven, Nadine Mengis, Laurie Menviel, Martine Michou, Igor I. Mokhov, Akira Oka, Jörg Schwinger, Roland Séférian, Gary Shaffer, Andrei Sokolov, Kaoru Tachiiri, Jerry Tjiputra, Andrew Wiltshire, and Tilo Ziehn
Biogeosciences, 17, 2987–3016, https://doi.org/10.5194/bg-17-2987-2020, https://doi.org/10.5194/bg-17-2987-2020, 2020
Short summary
Short summary
The Zero Emissions Commitment (ZEC) is the change in global temperature expected to occur following the complete cessation of CO2 emissions. Here we use 18 climate models to assess the value of ZEC. For our experiment we find that ZEC 50 years after emissions cease is between −0.36 to +0.29 °C. The most likely value of ZEC is assessed to be close to zero. However, substantial continued warming for decades or centuries following cessation of CO2 emission cannot be ruled out.
Christopher P. O. Reyer, Ramiro Silveyra Gonzalez, Klara Dolos, Florian Hartig, Ylva Hauf, Matthias Noack, Petra Lasch-Born, Thomas Rötzer, Hans Pretzsch, Henning Meesenburg, Stefan Fleck, Markus Wagner, Andreas Bolte, Tanja G. M. Sanders, Pasi Kolari, Annikki Mäkelä, Timo Vesala, Ivan Mammarella, Jukka Pumpanen, Alessio Collalti, Carlo Trotta, Giorgio Matteucci, Ettore D'Andrea, Lenka Foltýnová, Jan Krejza, Andreas Ibrom, Kim Pilegaard, Denis Loustau, Jean-Marc Bonnefond, Paul Berbigier, Delphine Picart, Sébastien Lafont, Michael Dietze, David Cameron, Massimo Vieno, Hanqin Tian, Alicia Palacios-Orueta, Victor Cicuendez, Laura Recuero, Klaus Wiese, Matthias Büchner, Stefan Lange, Jan Volkholz, Hyungjun Kim, Joanna A. Horemans, Friedrich Bohn, Jörg Steinkamp, Alexander Chikalanov, Graham P. Weedon, Justin Sheffield, Flurin Babst, Iliusi Vega del Valle, Felicitas Suckow, Simon Martel, Mats Mahnken, Martin Gutsch, and Katja Frieler
Earth Syst. Sci. Data, 12, 1295–1320, https://doi.org/10.5194/essd-12-1295-2020, https://doi.org/10.5194/essd-12-1295-2020, 2020
Short summary
Short summary
Process-based vegetation models are widely used to predict local and global ecosystem dynamics and climate change impacts. Due to their complexity, they require careful parameterization and evaluation to ensure that projections are accurate and reliable. The PROFOUND Database provides a wide range of empirical data to calibrate and evaluate vegetation models that simulate climate impacts at the forest stand scale to support systematic model intercomparisons and model development in Europe.
Kurt C. Solander, Brent D. Newman, Alessandro Carioca de Araujo, Holly R. Barnard, Z. Carter Berry, Damien Bonal, Mario Bretfeld, Benoit Burban, Luiz Antonio Candido, Rolando Célleri, Jeffery Q. Chambers, Bradley O. Christoffersen, Matteo Detto, Wouter A. Dorigo, Brent E. Ewers, Savio José Filgueiras Ferreira, Alexander Knohl, L. Ruby Leung, Nate G. McDowell, Gretchen R. Miller, Maria Terezinha Ferreira Monteiro, Georgianne W. Moore, Robinson Negron-Juarez, Scott R. Saleska, Christian Stiegler, Javier Tomasella, and Chonggang Xu
Hydrol. Earth Syst. Sci., 24, 2303–2322, https://doi.org/10.5194/hess-24-2303-2020, https://doi.org/10.5194/hess-24-2303-2020, 2020
Short summary
Short summary
We evaluate the soil moisture response in the humid tropics to El Niño during the three most recent super El Niño events. Our estimates are compared to in situ soil moisture estimates that span five continents. We find the strongest and most consistent soil moisture decreases in the Amazon and maritime southeastern Asia, while the most consistent increases occur over eastern Africa. Our results can be used to improve estimates of soil moisture in tropical ecohydrology models at multiple scales.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
Short summary
Short summary
We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Stephanie C. Pennington, Nate G. McDowell, J. Patrick Megonigal, James C. Stegen, and Ben Bond-Lamberty
Biogeosciences, 17, 771–780, https://doi.org/10.5194/bg-17-771-2020, https://doi.org/10.5194/bg-17-771-2020, 2020
Short summary
Short summary
Soil respiration (Rs) is the flow of CO2 from the soil surface to the atmosphere and is one of the largest carbon fluxes on land. This study examined the effect of local basal area (tree area) on Rs in a coastal forest in eastern Maryland, USA. Rs measurements were taken as well as distance from soil collar, diameter, and species of each tree within a 15 m radius. We found that trees within 5 m of our sampling points had a positive effect on how sensitive soil respiration was to temperature.
Christian G. Andresen, David M. Lawrence, Cathy J. Wilson, A. David McGuire, Charles Koven, Kevin Schaefer, Elchin Jafarov, Shushi Peng, Xiaodong Chen, Isabelle Gouttevin, Eleanor Burke, Sarah Chadburn, Duoying Ji, Guangsheng Chen, Daniel Hayes, and Wenxin Zhang
The Cryosphere, 14, 445–459, https://doi.org/10.5194/tc-14-445-2020, https://doi.org/10.5194/tc-14-445-2020, 2020
Short summary
Short summary
Widely-used land models project near-surface drying of the terrestrial Arctic despite increases in the net water balance driven by climate change. Drying was generally associated with increases of active-layer depth and permafrost thaw in a warming climate. However, models lack important mechanisms such as thermokarst and soil subsidence that will change the hydrological regime and add to the large uncertainty in the future Arctic hydrological state and the associated permafrost carbon feedback.
Chris D. Jones, Thomas L. Frölicher, Charles Koven, Andrew H. MacDougall, H. Damon Matthews, Kirsten Zickfeld, Joeri Rogelj, Katarzyna B. Tokarska, Nathan P. Gillett, Tatiana Ilyina, Malte Meinshausen, Nadine Mengis, Roland Séférian, Michael Eby, and Friedrich A. Burger
Geosci. Model Dev., 12, 4375–4385, https://doi.org/10.5194/gmd-12-4375-2019, https://doi.org/10.5194/gmd-12-4375-2019, 2019
Short summary
Short summary
Global warming is simply related to the total emission of CO2 allowing us to define a carbon budget. However, information on the Zero Emissions Commitment is a key missing link to assess remaining carbon budgets to achieve the climate targets of the Paris Agreement. It was therefore decided that a small targeted MIP activity to fill this knowledge gap would be extremely valuable. This article formalises the experimental design alongside the other CMIP6 documentation papers.
Marcos Longo, Ryan G. Knox, David M. Medvigy, Naomi M. Levine, Michael C. Dietze, Yeonjoo Kim, Abigail L. S. Swann, Ke Zhang, Christine R. Rollinson, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4309–4346, https://doi.org/10.5194/gmd-12-4309-2019, https://doi.org/10.5194/gmd-12-4309-2019, 2019
Short summary
Short summary
Our paper describes the Ecosystem Demography model. This computer program calculates how plants and ground exchange heat, water, and carbon with the air, and how plants grow, reproduce and die in different climates. Most models simplify forests to an average big tree. We consider that tall, deep-rooted trees get more light and water than small plants, and that some plants can with shade and drought. This diversity helps us to better explain how plants live and interact with the atmosphere.
Marcos Longo, Ryan G. Knox, Naomi M. Levine, Abigail L. S. Swann, David M. Medvigy, Michael C. Dietze, Yeonjoo Kim, Ke Zhang, Damien Bonal, Benoit Burban, Plínio B. Camargo, Matthew N. Hayek, Scott R. Saleska, Rodrigo da Silva, Rafael L. Bras, Steven C. Wofsy, and Paul R. Moorcroft
Geosci. Model Dev., 12, 4347–4374, https://doi.org/10.5194/gmd-12-4347-2019, https://doi.org/10.5194/gmd-12-4347-2019, 2019
Short summary
Short summary
The Ecosystem Demography model calculates the fluxes of heat, water, and carbon between plants and ground and the air, and the life cycle of plants in different climates. To test if our calculations were reasonable, we compared our results with field and satellite measurements. Our model predicts well the extent of the Amazon forest, how much light forests absorb, and how much water forests release to the air. However, it must improve the tree growth rates and how fast dead plants decompose.
Elias C. Massoud, Chonggang Xu, Rosie A. Fisher, Ryan G. Knox, Anthony P. Walker, Shawn P. Serbin, Bradley O. Christoffersen, Jennifer A. Holm, Lara M. Kueppers, Daniel M. Ricciuto, Liang Wei, Daniel J. Johnson, Jeffrey Q. Chambers, Charlie D. Koven, Nate G. McDowell, and Jasper A. Vrugt
Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, https://doi.org/10.5194/gmd-12-4133-2019, 2019
Short summary
Short summary
We conducted a comprehensive sensitivity analysis to understand behaviors of a demographic vegetation model within a land surface model. By running the model 5000 times with changing input parameter values, we found that (1) the photosynthetic capacity controls carbon fluxes, (2) the allometry is important for tree growth, and (3) the targeted carbon storage is important for tree survival. These results can provide guidance on improved model parameterization for a better fit to observations.
Mingkai Jiang, Sönke Zaehle, Martin G. De Kauwe, Anthony P. Walker, Silvia Caldararu, David S. Ellsworth, and Belinda E. Medlyn
Geosci. Model Dev., 12, 2069–2089, https://doi.org/10.5194/gmd-12-2069-2019, https://doi.org/10.5194/gmd-12-2069-2019, 2019
Short summary
Short summary
Here we used a simple analytical framework developed by Comins and McMurtrie (1993) to investigate how different model assumptions affected plant responses to elevated CO2. This framework is useful in revealing both the consequences and the mechanisms through which different assumptions affect predictions. We therefore recommend the use of this framework to analyze the likely outcomes of new assumptions before introducing them to complex model structures.
Min Chen, Chris R. Vernon, Maoyi Huang, Katherine V. Calvin, and Ian P. Kraucunas
Geosci. Model Dev., 12, 1753–1764, https://doi.org/10.5194/gmd-12-1753-2019, https://doi.org/10.5194/gmd-12-1753-2019, 2019
Short summary
Short summary
Demeter is a community spatial downscaling model that disaggregates land use and land cover changes projected by integrated human–Earth system models. However, Demeter has not been intensively calibrated, and we still lack good knowledge about its sensitivity to key parameters and parameter uncertainties. This paper aims to solve this problem.
Isabel Martínez Cano, Helene C. Muller-Landau, S. Joseph Wright, Stephanie A. Bohlman, and Stephen W. Pacala
Biogeosciences, 16, 847–862, https://doi.org/10.5194/bg-16-847-2019, https://doi.org/10.5194/bg-16-847-2019, 2019
Jennifer W. Harden, Jonathan A. O'Donnell, Katherine A. Heckman, Benjamin N. Sulman, Charles D. Koven, Chien-Lu Ping, and Gary J. Michaelson
SOIL Discuss., https://doi.org/10.5194/soil-2018-41, https://doi.org/10.5194/soil-2018-41, 2019
Revised manuscript not accepted
Short summary
Short summary
We examined changes in soil carbon (C) associated with permafrost thaw, warming, and ecosystem shifts using a space-for-time study. Soil C turnover was estimated for soil C fractions using soil C and radiocarbon data. Observations informed a simple model to track soil C change over time. Both losses and gains of soil C occur in the profile due to shifts in C among density-separated fractions. Thawing initially resulted in C gains to mineral soil and eventually C losses as warming persists.
Boaz Hilman, Jan Muhr, Susan E. Trumbore, Norbert Kunert, Mariah S. Carbone, Päivi Yuval, S. Joseph Wright, Gerardo Moreno, Oscar Pérez-Priego, Mirco Migliavacca, Arnaud Carrara, José M. Grünzweig, Yagil Osem, Tal Weiner, and Alon Angert
Biogeosciences, 16, 177–191, https://doi.org/10.5194/bg-16-177-2019, https://doi.org/10.5194/bg-16-177-2019, 2019
Short summary
Short summary
Combined measurement of CO2 / O2 fluxes in tree stems suggested that on average 41 % of the respired CO2 was not emitted locally to the atmosphere. This finding strengthens the recognition that CO2 efflux from tree stems is not an accurate measure of respiration. The CO2 / O2 fluxes did not vary as expected if CO2 dissolution in the xylem sap was the main driver for the CO2 retention. We suggest the examination of refixation of respired CO2 as a possible mechanism for CO2 retention.
Jiali Qiu, Qichun Yang, Xuesong Zhang, Maoyi Huang, Jennifer C. Adam, and Keyvan Malek
Hydrol. Earth Syst. Sci., 23, 35–49, https://doi.org/10.5194/hess-23-35-2019, https://doi.org/10.5194/hess-23-35-2019, 2019
Short summary
Short summary
Complex water management activities challenge hydrologic modeling. We evaluated how different representations of reservoir operation and agricultural irrigation affect streamflow simulations in the Yakima River basin. Results highlight the importance of the inclusion of reliable reservoir and irrigation information in watershed models for improving watershed hydrology modeling. Models used here are public and hold the promise to benefit water assessment and management in other basins.
Anja Rammig, Jens Heinke, Florian Hofhansl, Hans Verbeeck, Timothy R. Baker, Bradley Christoffersen, Philippe Ciais, Hannes De Deurwaerder, Katrin Fleischer, David Galbraith, Matthieu Guimberteau, Andreas Huth, Michelle Johnson, Bart Krujit, Fanny Langerwisch, Patrick Meir, Phillip Papastefanou, Gilvan Sampaio, Kirsten Thonicke, Celso von Randow, Christian Zang, and Edna Rödig
Geosci. Model Dev., 11, 5203–5215, https://doi.org/10.5194/gmd-11-5203-2018, https://doi.org/10.5194/gmd-11-5203-2018, 2018
Short summary
Short summary
We propose a generic approach for a pixel-to-point comparison applicable for evaluation of models and remote-sensing products. We provide statistical measures accounting for the uncertainty in ecosystem variables. We demonstrate our approach by comparing simulated values of aboveground biomass, woody productivity and residence time of woody biomass from four dynamic global vegetation models (DGVMs) with measured inventory data from permanent plots in the Amazon rainforest.
Corinne Le Quéré, Robbie M. Andrew, Pierre Friedlingstein, Stephen Sitch, Judith Hauck, Julia Pongratz, Penelope A. Pickers, Jan Ivar Korsbakken, Glen P. Peters, Josep G. Canadell, Almut Arneth, Vivek K. Arora, Leticia Barbero, Ana Bastos, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Scott C. Doney, Thanos Gkritzalis, Daniel S. Goll, Ian Harris, Vanessa Haverd, Forrest M. Hoffman, Mario Hoppema, Richard A. Houghton, George Hurtt, Tatiana Ilyina, Atul K. Jain, Truls Johannessen, Chris D. Jones, Etsushi Kato, Ralph F. Keeling, Kees Klein Goldewijk, Peter Landschützer, Nathalie Lefèvre, Sebastian Lienert, Zhu Liu, Danica Lombardozzi, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Craig Neill, Are Olsen, Tsueno Ono, Prabir Patra, Anna Peregon, Wouter Peters, Philippe Peylin, Benjamin Pfeil, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Matthias Rocher, Christian Rödenbeck, Ute Schuster, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Tobias Steinhoff, Adrienne Sutton, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Nicolas Viovy, Anthony P. Walker, Andrew J. Wiltshire, Rebecca Wright, Sönke Zaehle, and Bo Zheng
Earth Syst. Sci. Data, 10, 2141–2194, https://doi.org/10.5194/essd-10-2141-2018, https://doi.org/10.5194/essd-10-2141-2018, 2018
Short summary
Short summary
The Global Carbon Budget 2018 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Huikyo Lee, Alexander Goodman, Lewis McGibbney, Duane E. Waliser, Jinwon Kim, Paul C. Loikith, Peter B. Gibson, and Elias C. Massoud
Geosci. Model Dev., 11, 4435–4449, https://doi.org/10.5194/gmd-11-4435-2018, https://doi.org/10.5194/gmd-11-4435-2018, 2018
Short summary
Short summary
The Regional Climate Model Evaluation System (RCMES) is designed to facilitate access to observational data and systematic evaluations of regional climate model simulations participating in the Coordinated Regional Climate Downscaling Experiment (CORDEX). To ensure software sustainability, development of RCMES is an open, publicly accessible process enabled by leveraging the Apache Software Foundation's open-source library, Open Climate Workbench (OCW).
Ashehad A. Ali, Yuanchao Fan, Marife D. Corre, Martyna M. Kotowska, Evelyn Hassler, Fernando E. Moyano, Christian Stiegler, Alexander Röll, Ana Meijide, Andre Ringeler, Christoph Leuschner, Tania June, Suria Tarigan, Holger Kreft, Dirk Hölscher, Chonggang Xu, Charles D. Koven, Rosie Fisher, Edzo Veldkamp, and Alexander Knohl
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2018-236, https://doi.org/10.5194/gmd-2018-236, 2018
Revised manuscript not accepted
Short summary
Short summary
We used carbon-use and water-use related datasets of small-holder rubber plantations from Jambi province, Indonesia to develop and calibrate a rubber plant functional type for the Community Land Model (CLM-rubber). Increased sensitivity of stomata to soil water stress and enhanced respiration costs enabled the model to capture the magnitude of transpiration and leaf area index. Including temporal variations in leaf life span enabled the model to better capture the seasonality of leaf litterfall.
Istem Fer, Ryan Kelly, Paul R. Moorcroft, Andrew D. Richardson, Elizabeth M. Cowdery, and Michael C. Dietze
Biogeosciences, 15, 5801–5830, https://doi.org/10.5194/bg-15-5801-2018, https://doi.org/10.5194/bg-15-5801-2018, 2018
Short summary
Short summary
The computer models we use to understand and forecast the ecosystem changes have multiple components that determine their outcomes. Due to our limited observation capacities, these components bear uncertainties that in return affect our predictions. While there are techniques for reducing these uncertainties, they are not applicable to every model due to computational and statistical barriers. This research presents a method that lowers those barriers and allows us to improve model predictions.
Anthony P. Walker, Ming Ye, Dan Lu, Martin G. De Kauwe, Lianhong Gu, Belinda E. Medlyn, Alistair Rogers, and Shawn P. Serbin
Geosci. Model Dev., 11, 3159–3185, https://doi.org/10.5194/gmd-11-3159-2018, https://doi.org/10.5194/gmd-11-3159-2018, 2018
Short summary
Short summary
Large uncertainty is inherent in model predictions due to imperfect knowledge of how to describe the processes that a model is intended to represent. Yet methods to quantify and evaluate this model hypothesis uncertainty are limited. To address this, the multi-assumption architecture and testbed (MAAT) automates the generation of all possible models by combining multiple representations of multiple processes. MAAT provides a formal framework for quantification of model hypothesis uncertainty.
Xiyan Xu, William J. Riley, Charles D. Koven, and Gensuo Jia
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-257, https://doi.org/10.5194/bg-2018-257, 2018
Preprint withdrawn
Corinne Le Quéré, Robbie M. Andrew, Pierre Friedlingstein, Stephen Sitch, Julia Pongratz, Andrew C. Manning, Jan Ivar Korsbakken, Glen P. Peters, Josep G. Canadell, Robert B. Jackson, Thomas A. Boden, Pieter P. Tans, Oliver D. Andrews, Vivek K. Arora, Dorothee C. E. Bakker, Leticia Barbero, Meike Becker, Richard A. Betts, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Catherine E. Cosca, Jessica Cross, Kim Currie, Thomas Gasser, Ian Harris, Judith Hauck, Vanessa Haverd, Richard A. Houghton, Christopher W. Hunt, George Hurtt, Tatiana Ilyina, Atul K. Jain, Etsushi Kato, Markus Kautz, Ralph F. Keeling, Kees Klein Goldewijk, Arne Körtzinger, Peter Landschützer, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Ivan Lima, Danica Lombardozzi, Nicolas Metzl, Frank Millero, Pedro M. S. Monteiro, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Yukihiro Nojiri, X. Antonio Padin, Anna Peregon, Benjamin Pfeil, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Janet Reimer, Christian Rödenbeck, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Benjamin D. Stocker, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Steven van Heuven, Nicolas Viovy, Nicolas Vuichard, Anthony P. Walker, Andrew J. Watson, Andrew J. Wiltshire, Sönke Zaehle, and Dan Zhu
Earth Syst. Sci. Data, 10, 405–448, https://doi.org/10.5194/essd-10-405-2018, https://doi.org/10.5194/essd-10-405-2018, 2018
Short summary
Short summary
The Global Carbon Budget 2017 describes data sets and methodology to quantify the five major components of the global carbon budget and their uncertainties. It is the 12th annual update and the 6th published in this journal.
Katrina E. Bennett, Theodore J. Bohn, Kurt Solander, Nathan G. McDowell, Chonggang Xu, Enrique Vivoni, and Richard S. Middleton
Hydrol. Earth Syst. Sci., 22, 709–725, https://doi.org/10.5194/hess-22-709-2018, https://doi.org/10.5194/hess-22-709-2018, 2018
Short summary
Short summary
We applied the Variable Infiltration Capacity hydrologic model to examine scenarios of change under climate and landscape disturbances in the San Juan River basin, a major sub-watershed of the Colorado River basin. Climate change coupled with landscape disturbance leads to reduced streamflow in the San Juan River basin. Disturbances are expected to be widespread in this region. Therefore, accounting for these changes within the context of climate change is imperative for water resource planning.
Qianqian Zhou, Guoyong Leng, and Maoyi Huang
Hydrol. Earth Syst. Sci., 22, 305–316, https://doi.org/10.5194/hess-22-305-2018, https://doi.org/10.5194/hess-22-305-2018, 2018
Short summary
Short summary
Our results showed that adaptations through designing and updating urban drainage systems are effective in coping with urban flood risk under climate change. In the case study region, the magnitude of urban flood risk reduction through adaptations is more than double that by climate mitigations. We emphasize the importance of accounting for both global-scale climate mitigation and local-scale adaptations in assessing future urban flood risks in a consistent frame.
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
Short summary
Short summary
Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
Gautam Bisht, Maoyi Huang, Tian Zhou, Xingyuan Chen, Heng Dai, Glenn E. Hammond, William J. Riley, Janelle L. Downs, Ying Liu, and John M. Zachara
Geosci. Model Dev., 10, 4539–4562, https://doi.org/10.5194/gmd-10-4539-2017, https://doi.org/10.5194/gmd-10-4539-2017, 2017
Short summary
Short summary
A fully coupled three-dimensional surface and subsurface land model, CP v1.0, was developed to simulate three-way interactions among river water, groundwater, and land surface processes. The coupled model can be used for improving mechanistic understanding of ecosystem functioning and biogeochemical cycling along river corridors under historical and future hydroclimatic changes. The dataset presented in this study can also serve as a good benchmarking case for testing other integrated models.
Wei Li, Philippe Ciais, Shushi Peng, Chao Yue, Yilong Wang, Martin Thurner, Sassan S. Saatchi, Almut Arneth, Valerio Avitabile, Nuno Carvalhais, Anna B. Harper, Etsushi Kato, Charles Koven, Yi Y. Liu, Julia E.M.S. Nabel, Yude Pan, Julia Pongratz, Benjamin Poulter, Thomas A. M. Pugh, Maurizio Santoro, Stephen Sitch, Benjamin D. Stocker, Nicolas Viovy, Andy Wiltshire, Rasoul Yousefpour, and Sönke Zaehle
Biogeosciences, 14, 5053–5067, https://doi.org/10.5194/bg-14-5053-2017, https://doi.org/10.5194/bg-14-5053-2017, 2017
Short summary
Short summary
We used several observation-based biomass datasets to constrain the historical land-use change carbon emissions simulated by models. Compared to the range of the original modeled emissions (from 94 to 273 Pg C), the observationally constrained global cumulative emission estimate is 155 ± 50 Pg C (1σ Gaussian error) from 1901 to 2012. Our approach can also be applied to evaluate the LULCC impact of land-based climate mitigation policies.
Deborah A. Clark, Shinichi Asao, Rosie Fisher, Sasha Reed, Peter B. Reich, Michael G. Ryan, Tana E. Wood, and Xiaojuan Yang
Biogeosciences, 14, 4663–4690, https://doi.org/10.5194/bg-14-4663-2017, https://doi.org/10.5194/bg-14-4663-2017, 2017
Short summary
Short summary
Improved modeling of tropical-forest carbon cycling is urgently needed to project future climate and to guide global policy for greenhouse gases. Tropical forests store and process immense amounts of carbon, and their carbon cycling may be responding to climate change. Our goal with this paper, a multidisciplinary collaboration between modelers and field ecologists, is to identify reference-level field data from tropical forests that can be used to guide the models for these key ecosystems.
Jennifer R. Marlon, Neil Pederson, Connor Nolan, Simon Goring, Bryan Shuman, Ann Robertson, Robert Booth, Patrick J. Bartlein, Melissa A. Berke, Michael Clifford, Edward Cook, Ann Dieffenbacher-Krall, Michael C. Dietze, Amy Hessl, J. Bradford Hubeny, Stephen T. Jackson, Jeremiah Marsicek, Jason McLachlan, Cary J. Mock, David J. P. Moore, Jonathan Nichols, Dorothy Peteet, Kevin Schaefer, Valerie Trouet, Charles Umbanhowar, John W. Williams, and Zicheng Yu
Clim. Past, 13, 1355–1379, https://doi.org/10.5194/cp-13-1355-2017, https://doi.org/10.5194/cp-13-1355-2017, 2017
Short summary
Short summary
To improve our understanding of paleoclimate in the northeastern (NE) US, we compiled data from pollen, tree rings, lake levels, testate amoeba from bogs, and other proxies from the last 3000 years. The paleoclimate synthesis supports long-term cooling until the 1800s and reveals an abrupt transition from wet to dry conditions around 550–750 CE. Evidence suggests the region is now becoming warmer and wetter, but more calibrated data are needed, especially to capture multidecadal variability.
Henrique F. Duarte, Brett M. Raczka, Daniel M. Ricciuto, John C. Lin, Charles D. Koven, Peter E. Thornton, David R. Bowling, Chun-Ta Lai, Kenneth J. Bible, and James R. Ehleringer
Biogeosciences, 14, 4315–4340, https://doi.org/10.5194/bg-14-4315-2017, https://doi.org/10.5194/bg-14-4315-2017, 2017
Short summary
Short summary
We evaluate the Community Land Model (CLM4.5) against observations at an old-growth coniferous forest site that is subjected to water stress each summer. We found that, after calibration, CLM was able to reasonably simulate the observed fluxes of energy and carbon, carbon stocks, carbon isotope ratios, and ecosystem response to water stress. This study demonstrates that carbon isotopes can expose structural weaknesses in CLM and provide a key constraint that may guide future model development.
Dan Lu, Daniel Ricciuto, Anthony Walker, Cosmin Safta, and William Munger
Biogeosciences, 14, 4295–4314, https://doi.org/10.5194/bg-14-4295-2017, https://doi.org/10.5194/bg-14-4295-2017, 2017
Short summary
Short summary
Calibration of terrestrial ecosystem models (TEMs) is important but challenging. This study applies an advanced sampling technique for parameter estimation of a TEM. The results improve the model fit and predictive performance.
Keith F. Lewin, Andrew M. McMahon, Kim S. Ely, Shawn P. Serbin, and Alistair Rogers
Biogeosciences, 14, 4071–4083, https://doi.org/10.5194/bg-14-4071-2017, https://doi.org/10.5194/bg-14-4071-2017, 2017
Short summary
Short summary
Experiments that manipulate the temperature of plants and ecosystems are used to improve understanding of how they will respond to climate change. In logistically challenging locations passive warming using solar energy is the the only viable option for warming experiments. Unfortunately current passive warming approaches can only raise air temperature by about 1.5 °C. We have developed a novel approach that doubles the warming possible using solar energy and requires no power.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
Short summary
Short summary
Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Yaqiong Lu, Ian N. Williams, Justin E. Bagley, Margaret S. Torn, and Lara M. Kueppers
Geosci. Model Dev., 10, 1873–1888, https://doi.org/10.5194/gmd-10-1873-2017, https://doi.org/10.5194/gmd-10-1873-2017, 2017
Short summary
Short summary
Predicting winter wheat growth in the future climate scenarios is crucial for food security. We developed a winter wheat model in the Community Land Model to better predict winter wheat growth and grain production at multiple temporal and spatial scales. We validated the model and found that the new winter wheat model improved the prediction of winter wheat growth related variables during the spring growing season but underestimated yield in regions with historically greater yields.
Andrew G. Slater, David M. Lawrence, and Charles D. Koven
The Cryosphere, 11, 989–996, https://doi.org/10.5194/tc-11-989-2017, https://doi.org/10.5194/tc-11-989-2017, 2017
Short summary
Short summary
This work defines a metric for evaluation of a specific model snow process, namely, heat transfer through snow into soil. Heat transfer through snow regulates the difference in air temperature versus soil temperature. Accurate representation of the snow heat transfer process is critically important for accurate representation of the current and future state of permafrost. Utilizing this metric, we can clearly identify models that can and cannot reasonably represent snow heat transfer.
Bradley O. Christoffersen, Manuel Gloor, Sophie Fauset, Nikolaos M. Fyllas, David R. Galbraith, Timothy R. Baker, Bart Kruijt, Lucy Rowland, Rosie A. Fisher, Oliver J. Binks, Sanna Sevanto, Chonggang Xu, Steven Jansen, Brendan Choat, Maurizio Mencuccini, Nate G. McDowell, and Patrick Meir
Geosci. Model Dev., 9, 4227–4255, https://doi.org/10.5194/gmd-9-4227-2016, https://doi.org/10.5194/gmd-9-4227-2016, 2016
Short summary
Short summary
We developed a plant hydraulics model for tropical forests based on established plant physiological theory, and parameterized it by conducting a pantropical hydraulic trait survey. We show that a substantial amount of trait diversity can be represented in the model by a reduced set of trait dimensions. The fully parameterized model is able capture tree-level variation in water status and improves simulations of total ecosystem transpiration, showing how to incorporate hydraulic traits in models.
Corinne Le Quéré, Robbie M. Andrew, Josep G. Canadell, Stephen Sitch, Jan Ivar Korsbakken, Glen P. Peters, Andrew C. Manning, Thomas A. Boden, Pieter P. Tans, Richard A. Houghton, Ralph F. Keeling, Simone Alin, Oliver D. Andrews, Peter Anthoni, Leticia Barbero, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Kim Currie, Christine Delire, Scott C. Doney, Pierre Friedlingstein, Thanos Gkritzalis, Ian Harris, Judith Hauck, Vanessa Haverd, Mario Hoppema, Kees Klein Goldewijk, Atul K. Jain, Etsushi Kato, Arne Körtzinger, Peter Landschützer, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Danica Lombardozzi, Joe R. Melton, Nicolas Metzl, Frank Millero, Pedro M. S. Monteiro, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Kevin O'Brien, Are Olsen, Abdirahman M. Omar, Tsuneo Ono, Denis Pierrot, Benjamin Poulter, Christian Rödenbeck, Joe Salisbury, Ute Schuster, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Benjamin D. Stocker, Adrienne J. Sutton, Taro Takahashi, Hanqin Tian, Bronte Tilbrook, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Nicolas Viovy, Anthony P. Walker, Andrew J. Wiltshire, and Sönke Zaehle
Earth Syst. Sci. Data, 8, 605–649, https://doi.org/10.5194/essd-8-605-2016, https://doi.org/10.5194/essd-8-605-2016, 2016
Short summary
Short summary
The Global Carbon Budget 2016 is the 11th annual update of emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, land, and ocean. This data synthesis brings together measurements, statistical information, and analyses of model results in order to provide an assessment of the global carbon budget and their uncertainties for years 1959 to 2015, with a projection for year 2016.
Brett Raczka, Henrique F. Duarte, Charles D. Koven, Daniel Ricciuto, Peter E. Thornton, John C. Lin, and David R. Bowling
Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, https://doi.org/10.5194/bg-13-5183-2016, 2016
Short summary
Short summary
We use carbon isotopes of CO2 to improve the performance of a land surface model, a component with earth system climate models. We found that isotope observations can provide important information related to the exchange of carbon and water from vegetation driven by environmental stress from low atmospheric moisture and nitrogen limitation. It follows that isotopes have a unique potential to improve model performance and provide insight into land surface model development.
Fang Zhao, Ning Zeng, Ghassem Asrar, Pierre Friedlingstein, Akihiko Ito, Atul Jain, Eugenia Kalnay, Etsushi Kato, Charles D. Koven, Ben Poulter, Rashid Rafique, Stephen Sitch, Shijie Shu, Beni Stocker, Nicolas Viovy, Andy Wiltshire, and Sonke Zaehle
Biogeosciences, 13, 5121–5137, https://doi.org/10.5194/bg-13-5121-2016, https://doi.org/10.5194/bg-13-5121-2016, 2016
Short summary
Short summary
The increasing seasonality of atmospheric CO2 is strongly linked with enhanced land vegetation activities in the last 5 decades, for which the importance of increasing CO2, climate and land use/cover change was evaluated in single model studies (Zeng et al., 2014; Forkel et al., 2016). Here we examine the relative importance of these factors in multiple models. Our results highlight models can show similar results in some benchmarks with different underlying regional dynamics.
Xiyan Xu, William J. Riley, Charles D. Koven, Dave P. Billesbach, Rachel Y.-W. Chang, Róisín Commane, Eugénie S. Euskirchen, Sean Hartery, Yoshinobu Harazono, Hiroki Iwata, Kyle C. McDonald, Charles E. Miller, Walter C. Oechel, Benjamin Poulter, Naama Raz-Yaseef, Colm Sweeney, Margaret Torn, Steven C. Wofsy, Zhen Zhang, and Donatella Zona
Biogeosciences, 13, 5043–5056, https://doi.org/10.5194/bg-13-5043-2016, https://doi.org/10.5194/bg-13-5043-2016, 2016
Short summary
Short summary
Wetlands are the largest global natural methane source. Peat-rich bogs and fens lying between 50°N and 70°N contribute 10–30% to this source. The predictive capability of the seasonal methane cycle can directly affect the estimation of global methane budget. We present multiscale methane seasonal emission by observations and modeling and find that the uncertainties in predicting the seasonal methane emissions are from the wetland extent, cold-season CH4 production and CH4 transport processes.
Chris D. Jones, Vivek Arora, Pierre Friedlingstein, Laurent Bopp, Victor Brovkin, John Dunne, Heather Graven, Forrest Hoffman, Tatiana Ilyina, Jasmin G. John, Martin Jung, Michio Kawamiya, Charlie Koven, Julia Pongratz, Thomas Raddatz, James T. Randerson, and Sönke Zaehle
Geosci. Model Dev., 9, 2853–2880, https://doi.org/10.5194/gmd-9-2853-2016, https://doi.org/10.5194/gmd-9-2853-2016, 2016
Short summary
Short summary
How the carbon cycle interacts with climate will affect future climate change and how society plans emissions reductions to achieve climate targets. The Coupled Climate Carbon Cycle Model Intercomparison Project (C4MIP) is an endorsed activity of CMIP6 and aims to quantify these interactions and feedbacks in state-of-the-art climate models. This paper lays out the experimental protocol for modelling groups to follow to contribute to C4MIP. It is a contribution to the CMIP6 GMD Special Issue.
Wenli Wang, Annette Rinke, John C. Moore, Duoying Ji, Xuefeng Cui, Shushi Peng, David M. Lawrence, A. David McGuire, Eleanor J. Burke, Xiaodong Chen, Bertrand Decharme, Charles Koven, Andrew MacDougall, Kazuyuki Saito, Wenxin Zhang, Ramdane Alkama, Theodore J. Bohn, Philippe Ciais, Christine Delire, Isabelle Gouttevin, Tomohiro Hajima, Gerhard Krinner, Dennis P. Lettenmaier, Paul A. Miller, Benjamin Smith, Tetsuo Sueyoshi, and Artem B. Sherstiukov
The Cryosphere, 10, 1721–1737, https://doi.org/10.5194/tc-10-1721-2016, https://doi.org/10.5194/tc-10-1721-2016, 2016
Short summary
Short summary
The winter snow insulation is a key process for air–soil temperature coupling and is relevant for permafrost simulations. Differences in simulated air–soil temperature relationships and their modulation by climate conditions are found to be related to the snow model physics. Generally, models with better performance apply multilayer snow schemes.
Chun Zhao, Maoyi Huang, Jerome D. Fast, Larry K. Berg, Yun Qian, Alex Guenther, Dasa Gu, Manish Shrivastava, Ying Liu, Stacy Walters, Gabriele Pfister, Jiming Jin, John E. Shilling, and Carsten Warneke
Geosci. Model Dev., 9, 1959–1976, https://doi.org/10.5194/gmd-9-1959-2016, https://doi.org/10.5194/gmd-9-1959-2016, 2016
Short summary
Short summary
In this study, the latest version of MEGAN is coupled within CLM4 in WRF-Chem. In this implementation, MEGAN shares a consistent vegetation map with CLM4. This improved modeling framework is used to investigate the impact of two land surface schemes on BVOCs and examine the sensitivity of BVOCs to vegetation distributions in California. This study indicates that more effort is needed to obtain the most appropriate and accurate land cover data sets for climate and air quality models.
A. A. Ali, C. Xu, A. Rogers, R. A. Fisher, S. D. Wullschleger, E. C. Massoud, J. A. Vrugt, J. D. Muss, N. G. McDowell, J. B. Fisher, P. B. Reich, and C. J. Wilson
Geosci. Model Dev., 9, 587–606, https://doi.org/10.5194/gmd-9-587-2016, https://doi.org/10.5194/gmd-9-587-2016, 2016
Short summary
Short summary
We have developed a mechanistic model of leaf utilization of nitrogen for assimilation (LUNA V1.0) to predict the photosynthetic capacities at the global scale based on the optimization of key leaf-level metabolic processes. LUNA model predicts that future climatic changes would mostly affect plant photosynthetic capabilities in high-latitude regions and that Earth system models using fixed photosynthetic capabilities are likely to substantially overestimate future global photosynthesis.
W. Wang, A. Rinke, J. C. Moore, X. Cui, D. Ji, Q. Li, N. Zhang, C. Wang, S. Zhang, D. M. Lawrence, A. D. McGuire, W. Zhang, C. Delire, C. Koven, K. Saito, A. MacDougall, E. Burke, and B. Decharme
The Cryosphere, 10, 287–306, https://doi.org/10.5194/tc-10-287-2016, https://doi.org/10.5194/tc-10-287-2016, 2016
Short summary
Short summary
We use a model-ensemble approach for simulating permafrost on the Tibetan Plateau. We identify the uncertainties across models (state-of-the-art land surface models) and across methods (most commonly used methods to define permafrost).
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
We differentiate between uncertainties stemming from climatic driving data or from physical process parameterization, and show how these uncertainties vary seasonally and inter-annually, and how estimates are subject to the definition of permafrost used.
J. Mao, D. M. Ricciuto, P. E. Thornton, J. M. Warren, A. W. King, X. Shi, C. M. Iversen, and R. J. Norby
Biogeosciences, 13, 641–657, https://doi.org/10.5194/bg-13-641-2016, https://doi.org/10.5194/bg-13-641-2016, 2016
Short summary
Short summary
The aim of this study is to implement, calibrate and evaluate the CLM4 against carbon and hydrology observations from a shading and labeling experiment in a stand of young loblolly pines. We found a combination of parameters measured on-site and calibration targeting biomass, transpiration, and 13C discrimination gave good agreement with pretreatment measurements. We also used observations from the experiment to develop a conceptual model of short-term photosynthate storage and transport.
S. Peng, P. Ciais, G. Krinner, T. Wang, I. Gouttevin, A. D. McGuire, D. Lawrence, E. Burke, X. Chen, B. Decharme, C. Koven, A. MacDougall, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, C. Delire, T. Hajima, D. Ji, D. P. Lettenmaier, P. A. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
The Cryosphere, 10, 179–192, https://doi.org/10.5194/tc-10-179-2016, https://doi.org/10.5194/tc-10-179-2016, 2016
Short summary
Short summary
Soil temperature change is a key indicator of the dynamics of permafrost. Using nine process-based ecosystem models with permafrost processes, a large spread of soil temperature trends across the models. Air temperature and longwave downward radiation are the main drivers of soil temperature trends. Based on an emerging observation constraint method, the total boreal near-surface permafrost area decrease comprised between 39 ± 14 × 103 and 75 ± 14 × 103 km2 yr−1 from 1960 to 2000.
Q. Zhu, W. J. Riley, J. Tang, and C. D. Koven
Biogeosciences, 13, 341–363, https://doi.org/10.5194/bg-13-341-2016, https://doi.org/10.5194/bg-13-341-2016, 2016
Short summary
Short summary
Here we develop, calibrate, and test a nutrient competition model that accounts for multiple soil nutrients interacting with multiple biotic and abiotic consumers based on enzyme kinetics theory. Our model provides an ecologically consistent representation of nutrient competition appropriate for land biogeochemical models integrated in Earth system models.
G. Murray-Tortarolo, P. Friedlingstein, S. Sitch, V. J. Jaramillo, F. Murguía-Flores, A. Anav, Y. Liu, A. Arneth, A. Arvanitis, A. Harper, A. Jain, E. Kato, C. Koven, B. Poulter, B. D. Stocker, A. Wiltshire, S. Zaehle, and N. Zeng
Biogeosciences, 13, 223–238, https://doi.org/10.5194/bg-13-223-2016, https://doi.org/10.5194/bg-13-223-2016, 2016
Short summary
Short summary
We modelled the carbon (C) cycle in Mexico for three different time periods: past (20th century), present (2000-2005) and future (2006-2100). We used different available products to estimate C stocks and fluxes in the country. Contrary to other current estimates, our results showed that Mexico was a C sink and this is likely to continue in the next century (unless the most extreme climate-change scenarios are reached).
C. Le Quéré, R. Moriarty, R. M. Andrew, J. G. Canadell, S. Sitch, J. I. Korsbakken, P. Friedlingstein, G. P. Peters, R. J. Andres, T. A. Boden, R. A. Houghton, J. I. House, R. F. Keeling, P. Tans, A. Arneth, D. C. E. Bakker, L. Barbero, L. Bopp, J. Chang, F. Chevallier, L. P. Chini, P. Ciais, M. Fader, R. A. Feely, T. Gkritzalis, I. Harris, J. Hauck, T. Ilyina, A. K. Jain, E. Kato, V. Kitidis, K. Klein Goldewijk, C. Koven, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. Lenton, I. D. Lima, N. Metzl, F. Millero, D. R. Munro, A. Murata, J. E. M. S. Nabel, S. Nakaoka, Y. Nojiri, K. O'Brien, A. Olsen, T. Ono, F. F. Pérez, B. Pfeil, D. Pierrot, B. Poulter, G. Rehder, C. Rödenbeck, S. Saito, U. Schuster, J. Schwinger, R. Séférian, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, I. T. van der Laan-Luijkx, G. R. van der Werf, S. van Heuven, D. Vandemark, N. Viovy, A. Wiltshire, S. Zaehle, and N. Zeng
Earth Syst. Sci. Data, 7, 349–396, https://doi.org/10.5194/essd-7-349-2015, https://doi.org/10.5194/essd-7-349-2015, 2015
Short summary
Short summary
Accurate assessment of anthropogenic carbon dioxide emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to understand the global carbon cycle, support the development of climate policies, and project future climate change. We describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on a range of data and models and their interpretation by a broad scientific community.
R. A. Fisher, S. Muszala, M. Verteinstein, P. Lawrence, C. Xu, N. G. McDowell, R. G. Knox, C. Koven, J. Holm, B. M. Rogers, A. Spessa, D. Lawrence, and G. Bonan
Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, https://doi.org/10.5194/gmd-8-3593-2015, 2015
Short summary
Short summary
Predicting the distribution of vegetation under novel climates is important, both to understand how climate change will impact ecosystem services, but also to understand how vegetation changes might affect the carbon, energy and water cycles. Historically, predictions have been heavily dependent upon observations of existing vegetation boundaries. In this paper, we attempt to predict ecosystem boundaries from the ``bottom up'', and illustrate the complexities and promise of this approach.
C. D. Koven, J. Q. Chambers, K. Georgiou, R. Knox, R. Negron-Juarez, W. J. Riley, V. K. Arora, V. Brovkin, P. Friedlingstein, and C. D. Jones
Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, https://doi.org/10.5194/bg-12-5211-2015, 2015
Short summary
Short summary
Terrestrial carbon feedbacks are a large uncertainty in climate change. We separate modeled feedback responses into those governed by changed carbon inputs (productivity) and changed outputs (turnover). The disaggregated responses show that both are important in controlling inter-model uncertainty. Interactions between productivity and turnover are also important, and research must focus on these interactions for more accurate projections of carbon cycle feedbacks.
M. A. Rawlins, A. D. McGuire, J. S. Kimball, P. Dass, D. Lawrence, E. Burke, X. Chen, C. Delire, C. Koven, A. MacDougall, S. Peng, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, P. Ciais, B. Decharme, I. Gouttevin, T. Hajima, D. Ji, G. Krinner, D. P. Lettenmaier, P. Miller, J. C. Moore, B. Smith, and T. Sueyoshi
Biogeosciences, 12, 4385–4405, https://doi.org/10.5194/bg-12-4385-2015, https://doi.org/10.5194/bg-12-4385-2015, 2015
Short summary
Short summary
We used outputs from nine models to better understand land-atmosphere CO2 exchanges across Northern Eurasia over the period 1960-1990. Model estimates were assessed against independent ground and satellite measurements. We find that the models show a weakening of the CO2 sink over time; the models tend to overestimate respiration, causing an underestimate in NEP; the model range in regional NEP is twice the multimodel mean. Residence time for soil carbon decreased, amid a gain in carbon storage.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
Short summary
Short summary
Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
L. Rowland, A. Harper, B. O. Christoffersen, D. R. Galbraith, H. M. A. Imbuzeiro, T. L. Powell, C. Doughty, N. M. Levine, Y. Malhi, S. R. Saleska, P. R. Moorcroft, P. Meir, and M. Williams
Geosci. Model Dev., 8, 1097–1110, https://doi.org/10.5194/gmd-8-1097-2015, https://doi.org/10.5194/gmd-8-1097-2015, 2015
Short summary
Short summary
This study evaluates the capability of five vegetation models to simulate the response of forest productivity to changes in temperature and drought, using data collected from an Amazonian forest. This study concludes that model consistencies in the responses of net canopy carbon production to temperature and precipitation change were the result of inconsistently modelled leaf-scale process responses and substantial variation in modelled leaf area responses.
B. Bond-Lamberty, J. P. Fisk, J. A. Holm, V. Bailey, G. Bohrer, and C. M. Gough
Biogeosciences, 12, 513–526, https://doi.org/10.5194/bg-12-513-2015, https://doi.org/10.5194/bg-12-513-2015, 2015
Short summary
Short summary
How will aging forests behave as they undergo ecological transitions? Can our models, which support scientific, policy, and management analyses, accurately simulate these transitions? We tested whether three forest ecosystem models could reproduce dynamics observed in an experimentally manipulated forest in northern Michigan, USA. None of the models fully captured the post-disturbance C fluxes observed, raising doubts about their ability to simulate tree death after moderate disturbances.
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci., 19, 241–273, https://doi.org/10.5194/hess-19-241-2015, https://doi.org/10.5194/hess-19-241-2015, 2015
E. Joetzjer, C. Delire, H. Douville, P. Ciais, B. Decharme, R. Fisher, B. Christoffersen, J. C. Calvet, A. C. L. da Costa, L. V. Ferreira, and P. Meir
Geosci. Model Dev., 7, 2933–2950, https://doi.org/10.5194/gmd-7-2933-2014, https://doi.org/10.5194/gmd-7-2933-2014, 2014
M. Réjou-Méchain, H. C. Muller-Landau, M. Detto, S. C. Thomas, T. Le Toan, S. S. Saatchi, J. S. Barreto-Silva, N. A. Bourg, S. Bunyavejchewin, N. Butt, W. Y. Brockelman, M. Cao, D. Cárdenas, J.-M. Chiang, G. B. Chuyong, K. Clay, R. Condit, H. S. Dattaraja, S. J. Davies, A. Duque, S. Esufali, C. Ewango, R. H. S. Fernando, C. D. Fletcher, I. A. U. N. Gunatilleke, Z. Hao, K. E. Harms, T. B. Hart, B. Hérault, R. W. Howe, S. P. Hubbell, D. J. Johnson, D. Kenfack, A. J. Larson, L. Lin, Y. Lin, J. A. Lutz, J.-R. Makana, Y. Malhi, T. R. Marthews, R. W. McEwan, S. M. McMahon, W. J. McShea, R. Muscarella, A. Nathalang, N. S. M. Noor, C. J. Nytch, A. A. Oliveira, R. P. Phillips, N. Pongpattananurak, R. Punchi-Manage, R. Salim, J. Schurman, R. Sukumar, H. S. Suresh, U. Suwanvecho, D. W. Thomas, J. Thompson, M. Uríarte, R. Valencia, A. Vicentini, A. T. Wolf, S. Yap, Z. Yuan, C. E. Zartman, J. K. Zimmerman, and J. Chave
Biogeosciences, 11, 6827–6840, https://doi.org/10.5194/bg-11-6827-2014, https://doi.org/10.5194/bg-11-6827-2014, 2014
Short summary
Short summary
Forest carbon mapping may greatly reduce uncertainties in the global carbon budget. Accuracy of such maps depends however on the quality of field measurements. Using 30 large forest plots, we found large local spatial variability in biomass. When field calibration plots are smaller than the remote sensing pixels, this high local spatial variability results in an underestimation of the variance in biomass.
G. Hugelius, J. Strauss, S. Zubrzycki, J. W. Harden, E. A. G. Schuur, C.-L. Ping, L. Schirrmeister, G. Grosse, G. J. Michaelson, C. D. Koven, J. A. O'Donnell, B. Elberling, U. Mishra, P. Camill, Z. Yu, J. Palmtag, and P. Kuhry
Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, https://doi.org/10.5194/bg-11-6573-2014, 2014
Short summary
Short summary
This study provides an updated estimate of organic carbon stored in the northern permafrost region. The study includes estimates for carbon in soils (0 to 3 m depth) and deeper sediments in river deltas and the Yedoma region. We find that field data is still scarce from many regions. Total estimated carbon storage is ~1300 Pg with an uncertainty range of between 1100 and 1500 Pg. Around 800 Pg carbon is perennially frozen, equivalent to all carbon dioxide currently in the Earth's atmosphere.
C. Zhao, Z. Hu, Y. Qian, L. Ruby Leung, J. Huang, M. Huang, J. Jin, M. G. Flanner, R. Zhang, H. Wang, H. Yan, Z. Lu, and D. G. Streets
Atmos. Chem. Phys., 14, 11475–11491, https://doi.org/10.5194/acp-14-11475-2014, https://doi.org/10.5194/acp-14-11475-2014, 2014
J. A. Holm, J. Q. Chambers, W. D. Collins, and N. Higuchi
Biogeosciences, 11, 5773–5794, https://doi.org/10.5194/bg-11-5773-2014, https://doi.org/10.5194/bg-11-5773-2014, 2014
J. A. Holm, K. Jardine, A. B. Guenther, J. Q. Chambers, and E. Tribuzy
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-23995-2014, https://doi.org/10.5194/acpd-14-23995-2014, 2014
Revised manuscript not accepted
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
T. K. Tesfa, H.-Y. Li, L. R. Leung, M. Huang, Y. Ke, Y. Sun, and Y. Liu
Geosci. Model Dev., 7, 947–963, https://doi.org/10.5194/gmd-7-947-2014, https://doi.org/10.5194/gmd-7-947-2014, 2014
G. Hugelius, J. G. Bockheim, P. Camill, B. Elberling, G. Grosse, J. W. Harden, K. Johnson, T. Jorgenson, C. D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E. A. G. Schuur, Y. Sheng, L. C. Smith, J. Strauss, and Z. Yu
Earth Syst. Sci. Data, 5, 393–402, https://doi.org/10.5194/essd-5-393-2013, https://doi.org/10.5194/essd-5-393-2013, 2013
D. N. Huntzinger, C. Schwalm, A. M. Michalak, K. Schaefer, A. W. King, Y. Wei, A. Jacobson, S. Liu, R. B. Cook, W. M. Post, G. Berthier, D. Hayes, M. Huang, A. Ito, H. Lei, C. Lu, J. Mao, C. H. Peng, S. Peng, B. Poulter, D. Riccuito, X. Shi, H. Tian, W. Wang, N. Zeng, F. Zhao, and Q. Zhu
Geosci. Model Dev., 6, 2121–2133, https://doi.org/10.5194/gmd-6-2121-2013, https://doi.org/10.5194/gmd-6-2121-2013, 2013
R. G. Knox, M. Longo, A. L. S. Swann, K. Zhang, N. M. Levine, P. R. Moorcroft, and R. L. Bras
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-10-15295-2013, https://doi.org/10.5194/hessd-10-15295-2013, 2013
Preprint withdrawn
Y. Sun, Z. Hou, M. Huang, F. Tian, and L. Ruby Leung
Hydrol. Earth Syst. Sci., 17, 4995–5011, https://doi.org/10.5194/hess-17-4995-2013, https://doi.org/10.5194/hess-17-4995-2013, 2013
N. Voisin, L. Liu, M. Hejazi, T. Tesfa, H. Li, M. Huang, Y. Liu, and L. R. Leung
Hydrol. Earth Syst. Sci., 17, 4555–4575, https://doi.org/10.5194/hess-17-4555-2013, https://doi.org/10.5194/hess-17-4555-2013, 2013
Y. Fang, M. Huang, C. Liu, H. Li, and L. R. Leung
Geosci. Model Dev., 6, 1977–1988, https://doi.org/10.5194/gmd-6-1977-2013, https://doi.org/10.5194/gmd-6-1977-2013, 2013
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109–7131, https://doi.org/10.5194/bg-10-7109-2013, https://doi.org/10.5194/bg-10-7109-2013, 2013
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
N. Voisin, H. Li, D. Ward, M. Huang, M. Wigmosta, and L. R. Leung
Hydrol. Earth Syst. Sci., 17, 3605–3622, https://doi.org/10.5194/hess-17-3605-2013, https://doi.org/10.5194/hess-17-3605-2013, 2013
Y. Ke, L. R. Leung, M. Huang, and H. Li
Geosci. Model Dev., 6, 1609–1622, https://doi.org/10.5194/gmd-6-1609-2013, https://doi.org/10.5194/gmd-6-1609-2013, 2013
J. Y. Tang, W. J. Riley, C. D. Koven, and Z. M. Subin
Geosci. Model Dev., 6, 127–140, https://doi.org/10.5194/gmd-6-127-2013, https://doi.org/10.5194/gmd-6-127-2013, 2013
Related subject area
Biogeochemistry: Modelling, Terrestrial
A 2001–2022 global gross primary productivity dataset using an ensemble model based on the random forest method
Future projections of Siberian wildfire and aerosol emissions
Mechanisms of soil organic carbon and nitrogen stabilization in mineral-associated organic matter – insights from modeling in phase space
Optimizing the terrestrial ecosystem gross primary productivity using carbonyl sulfide (COS) within a two-leaf modeling framework
Modeling integrated soil fertility management for maize production in Kenya using a Bayesian calibration of the DayCent model
Understanding and simulating cropland and non-cropland burning in Europe using the BASE (Burnt Area Simulator for Europe) model
When and why microbial-explicit soil organic carbon models can be unstable
The impacts of modelling prescribed vs. dynamic land cover in a high-CO2 future scenario – greening of the Arctic and Amazonian dieback
Climate-based prediction of carbon fluxes from deadwood in Australia
Integration of tree hydraulic processes and functional impairment to capture the drought resilience of a semiarid pine forest
The effect of temperature on photosystem II efficiency across plant functional types and climate
Modeling microbial carbon fluxes and stocks in global soils from 1901 to 2016
Elevated atmospheric CO2 concentration and vegetation structural changes contributed to gross primary productivity increase more than climate and forest cover changes in subtropical forests of China
Developing the DO3SE-crop model for Xiaoji, China
Non-steady-state stomatal conductance modeling and its implications: from leaf to ecosystem
Modelled forest ecosystem carbon–nitrogen dynamics with integrated mycorrhizal processes under elevated CO2
A chemical kinetics theory for interpreting the non-monotonic temperature dependence of enzymatic reactions
Representation of the Terrestrial Carbon Cycle in CMIP6
Using Free Air CO2 Enrichment data to constrain land surface model projections of the terrestrial carbon cycle
Multiscale assessment of North American terrestrial carbon balance
Simulating net ecosystem exchange under seasonal snow cover at an Arctic tundra site
X-BASE: the first terrestrial carbon and water flux products from an extended data-driven scaling framework, FLUXCOM-X
Spatial biases reduce the ability of Earth system models to simulate soil heterotrophic respiration fluxes
Future methane fluxes of peatlands are controlled by management practices and fluctuations in hydrological conditions due to climatic variability
Tropical dry forest response to nutrient fertilization: a model validation and sensitivity analysis
Connecting competitor, stress-tolerator and ruderal (CSR) theory and Lund Potsdam Jena managed Land 5 (LPJmL 5) to assess the role of environmental conditions, management and functional diversity for grassland ecosystem functions
A global fuel characteristic model and dataset for wildfire prediction
Can models adequately reflect how long-term nitrogen enrichment alters the forest soil carbon cycle?
Temporal variability of observed and simulated gross primary productivity, modulated by vegetation state and hydrometeorological drivers
Does dynamically modelled leaf area improve predictions of land surface water and carbon fluxes? – Insights into dynamic vegetation modules
Empirical upscaling of OzFlux eddy covariance for high-resolution monitoring of terrestrial carbon uptake in Australia
A modeling approach to investigate drivers, variability and uncertainties in O2 fluxes and O2 : CO2 exchange ratios in a temperate forest
Modeling coupled nitrification–denitrification in soil with an organic hotspot
A new method for estimating carbon dioxide emissions from drained peatland forest soils for the greenhouse gas inventory of Finland
Enabling a process-oriented hydro-biogeochemical model to simulate soil erosion and nutrient losses
Potassium limitation of forest productivity – Part 1: A mechanistic model simulating the effects of potassium availability on canopy carbon and water fluxes in tropical eucalypt stands
Potassium limitation of forest productivity – Part 2: CASTANEA-MAESPA-K shows a reduction in photosynthesis rather than a stoichiometric limitation of tissue formation
Global evaluation of terrestrial biogeochemistry in the Energy Exascale Earth System Model (E3SM) and the role of the phosphorus cycle in the historical terrestrial carbon balance
Assessing carbon storage capacity and saturation across six central US grasslands using data–model integration
Optimizing the carbonic anhydrase temperature response and stomatal conductance of carbonyl sulfide leaf uptake in the Simple Biosphere model (SiB4)
Exploring environmental and physiological drivers of the annual carbon budget of biocrusts from various climatic zones with a mechanistic data-driven model
Improved process representation of leaf phenology significantly shifts climate sensitivity of ecosystem carbon balance
Mapping of ESA's Climate Change Initiative land cover data to plant functional types for use in the CLASSIC land model
Exploring the impacts of unprecedented climate extremes on forest ecosystems: hypotheses to guide modeling and experimental studies
Effect of droughts and climate change on future soil weathering rates in Sweden
Information content in time series of litter decomposition studies and the transit time of litter in arid lands
Long-term changes of nitrogen leaching and the contributions of terrestrial nutrient sources to lake eutrophication dynamics on the Yangtze Plain of China
Towards an ensemble-based evaluation of land surface models in light of uncertain forcings and observations
Observational benchmarks inform representation of soil organic carbon dynamics in land surface models
Effect of land-use legacy on the future carbon sink for the conterminous US
Xin Chen, Tiexi Chen, Xiaodong Li, Yuanfang Chai, Shengjie Zhou, Renjie Guo, and Jie Dai
Biogeosciences, 21, 4285–4300, https://doi.org/10.5194/bg-21-4285-2024, https://doi.org/10.5194/bg-21-4285-2024, 2024
Short summary
Short summary
We provide an ensemble-model-based GPP dataset (ERF_GPP) that explains 85.1 % of the monthly variation in GPP across 170 sites, which is higher than other GPP estimate models. In addition, ERF_GPP improves the phenomenon of “high-value underestimation and low-value overestimation” in GPP estimation to some extent. Overall, ERF_GPP provides a more reliable estimate of global GPP and will facilitate further development of carbon cycle research.
Reza Kusuma Nurrohman, Tomomichi Kato, Hideki Ninomiya, Lea Végh, Nicolas Delbart, Tatsuya Miyauchi, Hisashi Sato, Tomohiro Shiraishi, and Ryuichi Hirata
Biogeosciences, 21, 4195–4227, https://doi.org/10.5194/bg-21-4195-2024, https://doi.org/10.5194/bg-21-4195-2024, 2024
Short summary
Short summary
SPITFIRE (SPread and InTensity of FIRE) was integrated into a spatially explicit individual-based dynamic global vegetation model to improve the accuracy of depicting Siberian forest fire frequency, intensity, and extent. Fires showed increased greenhouse gas and aerosol emissions in 2006–2100 for Representative Concentration Pathways. This study contributes to understanding fire dynamics, land ecosystem–climate interactions, and global material cycles under the threat of escalating fires.
Stefano Manzoni and M. Francesca Cotrufo
Biogeosciences, 21, 4077–4098, https://doi.org/10.5194/bg-21-4077-2024, https://doi.org/10.5194/bg-21-4077-2024, 2024
Short summary
Short summary
Organic carbon and nitrogen are stabilized in soils via microbial assimilation and stabilization of necromass (in vivo pathway) or via adsorption of the products of extracellular decomposition (ex vivo pathway). Here we use a diagnostic model to quantify which stabilization pathway is prevalent using data on residue-derived carbon and nitrogen incorporation in mineral-associated organic matter. We find that the in vivo pathway is dominant in fine-textured soils with low organic matter content.
Huajie Zhu, Xiuli Xing, Mousong Wu, Weimin Ju, and Fei Jiang
Biogeosciences, 21, 3735–3760, https://doi.org/10.5194/bg-21-3735-2024, https://doi.org/10.5194/bg-21-3735-2024, 2024
Short summary
Short summary
Ecosystem carbonyl sulfide (COS) fluxes were employed to optimize GPP estimation across ecosystems with the Biosphere-atmosphere Exchange Process Simulator (BEPS), which was developed for simulating the canopy COS uptake under its state-of-the-art two-leaf modeling framework. Our results showcased the efficacy of COS in improving model prediction and reducing prediction uncertainty of GPP and enhanced insights into the sensitivity, identifiability, and interactions of parameters related to COS.
Moritz Laub, Magdalena Necpalova, Marijn Van de Broek, Marc Corbeels, Samuel Mathu Ndungu, Monicah Wanjiku Mucheru-Muna, Daniel Mugendi, Rebecca Yegon, Wycliffe Waswa, Bernard Vanlauwe, and Johan Six
Biogeosciences, 21, 3691–3716, https://doi.org/10.5194/bg-21-3691-2024, https://doi.org/10.5194/bg-21-3691-2024, 2024
Short summary
Short summary
We used the DayCent model to assess the potential impact of integrated soil fertility management (ISFM) on maize production, soil fertility, and greenhouse gas emission in Kenya. After adjustments, DayCent represented measured mean yields and soil carbon stock changes well and N2O emissions acceptably. Our results showed that soil fertility losses could be reduced but not completely eliminated with ISFM and that, while N2O emissions increased with ISFM, emissions per kilogram yield decreased.
Matthew Forrest, Jessica Hetzer, Maik Billing, Simon P. K. Bowring, Eric Kosczor, Luke Oberhagemann, Oliver Perkins, Dan Warren, Fátima Arrogante-Funes, Kirsten Thonicke, and Thomas Hickler
EGUsphere, https://doi.org/10.5194/egusphere-2024-1973, https://doi.org/10.5194/egusphere-2024-1973, 2024
Short summary
Short summary
Climate change is causing an increase in extreme wildfires in Europe but drivers of fire are not well understood, especially across different land cover types. We used statistical models with satellite data, climate data and socioeconomic data to determine what affects burning in cropland and non-cropland area Europe. We found different drivers of burning in cropland burning vs non-cropland, to the point that some variable, e.g. population density, had completely the opposite effects.
Erik Schwarz, Samia Ghersheen, Salim Belyazid, and Stefano Manzoni
Biogeosciences, 21, 3441–3461, https://doi.org/10.5194/bg-21-3441-2024, https://doi.org/10.5194/bg-21-3441-2024, 2024
Short summary
Short summary
The occurrence of unstable equilibrium points (EPs) could impede the applicability of microbial-explicit soil organic carbon models. For archetypal model versions we identify when instability can occur and describe mathematical conditions to avoid such unstable EPs. We discuss implications for further model development, highlighting the important role of considering basic ecological principles to ensure biologically meaningful models.
Sian Kou-Giesbrecht, Vivek K. Arora, Christian Seiler, and Libo Wang
Biogeosciences, 21, 3339–3371, https://doi.org/10.5194/bg-21-3339-2024, https://doi.org/10.5194/bg-21-3339-2024, 2024
Short summary
Short summary
Terrestrial biosphere models can either prescribe the geographical distribution of biomes or simulate them dynamically, capturing climate-change-driven biome shifts. We isolate and examine the differences between these different land cover implementations. We find that the simulated terrestrial carbon sink at the end of the 21st century is twice as large in simulations with dynamic land cover than in simulations with prescribed land cover due to important range shifts in the Arctic and Amazon.
Elizabeth S. Duan, Luciana Chavez Rodriguez, Nicole Hemming-Schroeder, Baptiste Wijas, Habacuc Flores-Moreno, Alexander W. Cheesman, Lucas A. Cernusak, Michael J. Liddell, Paul Eggleton, Amy E. Zanne, and Steven D. Allison
Biogeosciences, 21, 3321–3338, https://doi.org/10.5194/bg-21-3321-2024, https://doi.org/10.5194/bg-21-3321-2024, 2024
Short summary
Short summary
Understanding the link between climate and carbon fluxes is crucial for predicting how climate change will impact carbon sinks. We estimated carbon dioxide (CO2) fluxes from deadwood in tropical Australia using wood moisture content and temperature. Our model predicted that the majority of deadwood carbon is released as CO2, except when termite activity is detected. Future models should also incorporate wood traits, like species and chemical composition, to better predict fluxes.
Daniel Nadal-Sala, Rüdiger Grote, David Kraus, Uri Hochberg, Tamir Klein, Yael Wagner, Fedor Tatarinov, Dan Yakir, and Nadine K. Ruehr
Biogeosciences, 21, 2973–2994, https://doi.org/10.5194/bg-21-2973-2024, https://doi.org/10.5194/bg-21-2973-2024, 2024
Short summary
Short summary
A hydraulic model approach is presented that can be added to any physiologically based ecosystem model. Simulated plant water potential triggers stomatal closure, photosynthesis decline, root–soil resistance increases, and sapwood and foliage senescence. The model has been evaluated at an extremely dry site stocked with Aleppo pine and was able to represent gas exchange, soil water content, and plant water potential. The model also responded realistically regarding leaf senescence.
Patrick Neri, Lianhong Gu, and Yang Song
Biogeosciences, 21, 2731–2758, https://doi.org/10.5194/bg-21-2731-2024, https://doi.org/10.5194/bg-21-2731-2024, 2024
Short summary
Short summary
A first-of-its-kind global-scale model of temperature resilience and tolerance of photosystem II maximum quantum yield informs how plants maintain their efficiency of converting light energy to chemical energy for photosynthesis under temperature changes. Our finding explores this variation across plant functional types and habitat climatology, highlighting diverse temperature response strategies and a method to improve global-scale photosynthesis modeling under climate change.
Liyuan He, Jorge L. Mazza Rodrigues, Melanie A. Mayes, Chun-Ta Lai, David A. Lipson, and Xiaofeng Xu
Biogeosciences, 21, 2313–2333, https://doi.org/10.5194/bg-21-2313-2024, https://doi.org/10.5194/bg-21-2313-2024, 2024
Short summary
Short summary
Soil microbes are the driving engine for biogeochemical cycles of carbon and nutrients. This study applies a microbial-explicit model to quantify bacteria and fungal biomass carbon in soils from 1901 to 2016. Results showed substantial increases in bacterial and fungal biomass carbon over the past century, jointly influenced by vegetation growth and soil temperature and moisture. This pioneering century-long estimation offers crucial insights into soil microbial roles in global carbon cycling.
Tao Chen, Félicien Meunier, Marc Peaucelle, Guoping Tang, Ye Yuan, and Hans Verbeeck
Biogeosciences, 21, 2253–2272, https://doi.org/10.5194/bg-21-2253-2024, https://doi.org/10.5194/bg-21-2253-2024, 2024
Short summary
Short summary
Chinese subtropical forest ecosystems are an extremely important component of global forest ecosystems and hence crucial for the global carbon cycle and regional climate change. However, there is still great uncertainty in the relationship between subtropical forest carbon sequestration and its drivers. We provide first quantitative estimates of the individual and interactive effects of different drivers on the gross primary productivity changes of various subtropical forest types in China.
Pritha Pande, Sam Bland, Nathan Booth, Jo Cook, Zhaozhong Feng, and Lisa Emberson
EGUsphere, https://doi.org/10.5194/egusphere-2024-694, https://doi.org/10.5194/egusphere-2024-694, 2024
Short summary
Short summary
The DO3SE-crop model extends the DO3SE to simulate ozone's impact on crops with modules for ozone uptake, damage, and crop growth from JULES-Crop. It's versatile, suits China's varied agriculture, and improves yield predictions under ozone stress. It is essential for policy, water management, and climate response, it integrates into Earth System Models for a comprehensive understanding of agriculture's interaction with global systems.
Ke Liu, Yujie Wang, Troy S. Magney, and Christian Frankenberg
Biogeosciences, 21, 1501–1516, https://doi.org/10.5194/bg-21-1501-2024, https://doi.org/10.5194/bg-21-1501-2024, 2024
Short summary
Short summary
Stomata are pores on leaves that regulate gas exchange between plants and the atmosphere. Existing land models unrealistically assume stomata can jump between steady states when the environment changes. We implemented dynamic modeling to predict gradual stomatal responses at different scales. Results suggested that considering this effect on plant behavior patterns in diurnal cycles was important. Our framework also simplified simulations and can contribute to further efficiency improvements.
Melanie A. Thurner, Silvia Caldararu, Jan Engel, Anja Rammig, and Sönke Zaehle
Biogeosciences, 21, 1391–1410, https://doi.org/10.5194/bg-21-1391-2024, https://doi.org/10.5194/bg-21-1391-2024, 2024
Short summary
Short summary
Due to their crucial role in terrestrial ecosystems, we implemented mycorrhizal fungi into the QUINCY terrestrial biosphere model. Fungi interact with mineral and organic soil to support plant N uptake and, thus, plant growth. Our results suggest that the effect of mycorrhizal interactions on simulated ecosystem dynamics is minor under constant environmental conditions but necessary to reproduce and understand observed patterns under changing conditions, such as rising atmospheric CO2.
Jinyun Tang and William J. Riley
Biogeosciences, 21, 1061–1070, https://doi.org/10.5194/bg-21-1061-2024, https://doi.org/10.5194/bg-21-1061-2024, 2024
Short summary
Short summary
A chemical kinetics theory is proposed to explain the non-monotonic relationship between temperature and biochemical rates. It incorporates the observed thermally reversible enzyme denaturation that is ensured by the ceaseless thermal motion of molecules and ions in an enzyme solution and three well-established theories: (1) law of mass action, (2) diffusion-limited chemical reaction theory, and (3) transition state theory.
Bettina K. Gier, Manuel Schlund, Pierre Friedlingstein, Chris D. Jones, Colin Jones, Sönke Zaehle, and Veronika Eyring
EGUsphere, https://doi.org/10.5194/egusphere-2024-277, https://doi.org/10.5194/egusphere-2024-277, 2024
Short summary
Short summary
This study investigates present day carbon cycle variables in CMIP5 and CMIP6 simulations. A significant improvement in the simulation of photosynthesis in models with nitrogen cycle is found, as well as only small differences between emission and concentration based simulations. Thus, we recommend the use of emission driven simulations in CMIP7 as default setup, and to view the nitrogen cycle as a necessary part of all future carbon cycle models.
Nina Raoult, Louis-Axel Edouard-Rambaut, Nicolas Vuichard, Vladislav Bastrikov, Anne Sofie Lansø, Bertrand Guenet, and Philippe Peylin
Biogeosciences, 21, 1017–1036, https://doi.org/10.5194/bg-21-1017-2024, https://doi.org/10.5194/bg-21-1017-2024, 2024
Short summary
Short summary
Observations are used to reduce uncertainty in land surface models (LSMs) by optimising poorly constraining parameters. However, optimising against current conditions does not necessarily ensure that the parameters treated as invariant will be robust in a changing climate. Manipulation experiments offer us a unique chance to optimise our models under different (here atmospheric CO2) conditions. By using these data in optimisations, we gain confidence in the future projections of LSMs.
Kelsey T. Foster, Wu Sun, Yoichi P. Shiga, Jiafu Mao, and Anna M. Michalak
Biogeosciences, 21, 869–891, https://doi.org/10.5194/bg-21-869-2024, https://doi.org/10.5194/bg-21-869-2024, 2024
Short summary
Short summary
Assessing agreement between bottom-up and top-down methods across spatial scales can provide insights into the relationship between ensemble spread (difference across models) and model accuracy (difference between model estimates and reality). We find that ensemble spread is unlikely to be a good indicator of actual uncertainty in the North American carbon balance. However, models that are consistent with atmospheric constraints show stronger agreement between top-down and bottom-up estimates.
Victoria R. Dutch, Nick Rutter, Leanne Wake, Oliver Sonnentag, Gabriel Hould Gosselin, Melody Sandells, Chris Derksen, Branden Walker, Gesa Meyer, Richard Essery, Richard Kelly, Phillip Marsh, Julia Boike, and Matteo Detto
Biogeosciences, 21, 825–841, https://doi.org/10.5194/bg-21-825-2024, https://doi.org/10.5194/bg-21-825-2024, 2024
Short summary
Short summary
We undertake a sensitivity study of three different parameters on the simulation of net ecosystem exchange (NEE) during the snow-covered non-growing season at an Arctic tundra site. Simulations are compared to eddy covariance measurements, with near-zero NEE simulated despite observed CO2 release. We then consider how to parameterise the model better in Arctic tundra environments on both sub-seasonal timescales and cumulatively throughout the snow-covered non-growing season.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billdesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Gharun Mana, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2024-165, https://doi.org/10.5194/egusphere-2024-165, 2024
Short summary
Short summary
The movement of water, carbon, and energy from the earth surface to the atmosphere, or flux, is an important process to understand that impacts all of our lives. Here we outline a method to estimate global water and CO2 fluxes based on direct measurements from site around the world called FLUXCOM-X. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Bertrand Guenet, Jérémie Orliac, Lauric Cécillon, Olivier Torres, Laura Sereni, Philip A. Martin, Pierre Barré, and Laurent Bopp
Biogeosciences, 21, 657–669, https://doi.org/10.5194/bg-21-657-2024, https://doi.org/10.5194/bg-21-657-2024, 2024
Short summary
Short summary
Heterotrophic respiration fluxes are a major flux between surfaces and the atmosphere, but Earth system models do not yet represent them correctly. Here we benchmarked Earth system models against observation-based products, and we identified the important mechanisms that need to be improved in the next-generation Earth system models.
Vilna Tyystjärvi, Tiina Markkanen, Leif Backman, Maarit Raivonen, Antti Leppänen, Xuefei Li, Paavo Ojanen, Kari Minkkinen, Roosa Hautala, Mikko Peltoniemi, Jani Anttila, Raija Laiho, Annalea Lohila, Raisa Mäkipää, and Tuula Aalto
EGUsphere, https://doi.org/10.5194/egusphere-2023-3037, https://doi.org/10.5194/egusphere-2023-3037, 2024
Short summary
Short summary
Drainage of boreal peatlands strongly influences soil methane fluxes with important implications to their climatic impacts. Here we simulate methane fluxes in forestry-drained and restored peatlands during the 21st century. We found that restoration turned peatlands to a source of methane but the magnitude varied regionally. In forests, changes in water table level influenced methane fluxes and in general, the sink was weaker under rotational forestry compared to continuous cover forestry.
Shuyue Li, Bonnie Waring, Jennifer Powers, and David Medvigy
Biogeosciences, 21, 455–471, https://doi.org/10.5194/bg-21-455-2024, https://doi.org/10.5194/bg-21-455-2024, 2024
Short summary
Short summary
We used an ecosystem model to simulate primary production of a tropical forest subjected to 3 years of nutrient fertilization. Simulations parameterized such that relative allocation to fine roots increased with increasing soil phosphorus had leaf, wood, and fine root production consistent with observations. However, these simulations seemed to over-allocate to fine roots on multidecadal timescales, affecting aboveground biomass. Additional observations across timescales would benefit models.
Stephen Björn Wirth, Arne Poyda, Friedhelm Taube, Britta Tietjen, Christoph Müller, Kirsten Thonicke, Anja Linstädter, Kai Behn, Sibyll Schaphoff, Werner von Bloh, and Susanne Rolinski
Biogeosciences, 21, 381–410, https://doi.org/10.5194/bg-21-381-2024, https://doi.org/10.5194/bg-21-381-2024, 2024
Short summary
Short summary
In dynamic global vegetation models (DGVMs), the role of functional diversity in forage supply and soil organic carbon storage of grasslands is not explicitly taken into account. We introduced functional diversity into the Lund Potsdam Jena managed Land (LPJmL) DGVM using CSR theory. The new model reproduced well-known trade-offs between plant traits and can be used to quantify the role of functional diversity in climate change mitigation using different functional diversity scenarios.
Joe R. McNorton and Francesca Di Giuseppe
Biogeosciences, 21, 279–300, https://doi.org/10.5194/bg-21-279-2024, https://doi.org/10.5194/bg-21-279-2024, 2024
Short summary
Short summary
Wildfires have wide-ranging consequences for local communities, air quality and ecosystems. Vegetation amount and moisture state are key components to forecast wildfires. We developed a combined model and satellite framework to characterise vegetation, including the type of fuel, whether it is alive or dead, and its moisture content. The daily data is at high resolution globally (~9 km). Our characteristics correlate with active fire data and can inform fire danger and spread modelling efforts.
Brooke A. Eastman, William R. Wieder, Melannie D. Hartman, Edward R. Brzostek, and William T. Peterjohn
Biogeosciences, 21, 201–221, https://doi.org/10.5194/bg-21-201-2024, https://doi.org/10.5194/bg-21-201-2024, 2024
Short summary
Short summary
We compared soil model performance to data from a long-term nitrogen addition experiment in a forested ecosystem. We found that in order for soil carbon models to accurately predict future forest carbon sequestration, two key processes must respond dynamically to nitrogen availability: (1) plant allocation of carbon to wood versus roots and (2) rates of soil organic matter decomposition. Long-term experiments can help improve our predictions of the land carbon sink and its climate impact.
Jan De Pue, Sebastian Wieneke, Ana Bastos, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Maral Maleki, Fabienne Maignan, Françoise Gellens-Meulenberghs, Ivan Janssens, and Manuela Balzarolo
Biogeosciences, 20, 4795–4818, https://doi.org/10.5194/bg-20-4795-2023, https://doi.org/10.5194/bg-20-4795-2023, 2023
Short summary
Short summary
The gross primary production (GPP) of the terrestrial biosphere is a key source of variability in the global carbon cycle. To estimate this flux, models can rely on remote sensing data (RS-driven), meteorological data (meteo-driven) or a combination of both (hybrid). An intercomparison of 11 models demonstrated that RS-driven models lack the sensitivity to short-term anomalies. Conversely, the simulation of soil moisture dynamics and stress response remains a challenge in meteo-driven models.
Sven Armin Westermann, Anke Hildebrandt, Souhail Bousetta, and Stephan Thober
EGUsphere, https://doi.org/10.5194/egusphere-2023-2101, https://doi.org/10.5194/egusphere-2023-2101, 2023
Short summary
Short summary
Plants at the land surface mediates between soil and atmosphere regarding water and carbon transport. Since plant growth is a dynamic process, models need to care for this dynamics. Here, two models which predict water and carbon fluxes by considering plant temporal evolution were tested against observational data. Currently, dynamizing plants in these models did not enhance their representativeness which is caused by a mismatch between implemented physical relations and observable connections.
Chad A. Burton, Luigi J. Renzullo, Sami W. Rifai, and Albert I. J. M. Van Dijk
Biogeosciences, 20, 4109–4134, https://doi.org/10.5194/bg-20-4109-2023, https://doi.org/10.5194/bg-20-4109-2023, 2023
Short summary
Short summary
Australia's land-based ecosystems play a critical role in controlling the variability in the global land carbon sink. However, uncertainties in the methods used for quantifying carbon fluxes limit our understanding. We develop high-resolution estimates of Australia's land carbon fluxes using machine learning methods and find that Australia is, on average, a stronger carbon sink than previously thought and that the seasonal dynamics of the fluxes differ from those described by other methods.
Yuan Yan, Anne Klosterhalfen, Fernando Moyano, Matthias Cuntz, Andrew C. Manning, and Alexander Knohl
Biogeosciences, 20, 4087–4107, https://doi.org/10.5194/bg-20-4087-2023, https://doi.org/10.5194/bg-20-4087-2023, 2023
Short summary
Short summary
A better understanding of O2 fluxes, their exchange ratios with CO2 and their interrelations with environmental conditions would provide further insights into biogeochemical ecosystem processes. We, therefore, used the multilayer canopy model CANVEG to simulate and analyze the flux exchange for our forest study site for 2012–2016. Based on these simulations, we further successfully tested the application of various micrometeorological methods and the prospects of real O2 flux measurements.
Jie Zhang, Elisabeth Larsen Kolstad, Wenxin Zhang, Iris Vogeler, and Søren O. Petersen
Biogeosciences, 20, 3895–3917, https://doi.org/10.5194/bg-20-3895-2023, https://doi.org/10.5194/bg-20-3895-2023, 2023
Short summary
Short summary
Manure application to agricultural land often results in large and variable N2O emissions. We propose a model with a parsimonious structure to investigate N transformations around such N2O hotspots. The model allows for new detailed insights into the interactions between transport and microbial activities regarding N2O emissions in heterogeneous soil environments. It highlights the importance of solute diffusion to N2O emissions from such hotspots which are often ignored by process-based models.
Jukka Alm, Antti Wall, Jukka-Pekka Myllykangas, Paavo Ojanen, Juha Heikkinen, Helena M. Henttonen, Raija Laiho, Kari Minkkinen, Tarja Tuomainen, and Juha Mikola
Biogeosciences, 20, 3827–3855, https://doi.org/10.5194/bg-20-3827-2023, https://doi.org/10.5194/bg-20-3827-2023, 2023
Short summary
Short summary
In Finland peatlands cover one-third of land area. For half of those, with 4.3 Mha being drained for forestry, Finland reports sinks and sources of greenhouse gases in forest lands on organic soils following its UNFCCC commitment. We describe a new method for compiling soil CO2 balance that follows changes in tree volume, tree harvests and temperature. An increasing trend of emissions from 1.4 to 7.9 Mt CO2 was calculated for drained peatland forest soils in Finland for 1990–2021.
Siqi Li, Bo Zhu, Xunhua Zheng, Pengcheng Hu, Shenghui Han, Jihui Fan, Tao Wang, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, Wei Zhang, and Yong Li
Biogeosciences, 20, 3555–3572, https://doi.org/10.5194/bg-20-3555-2023, https://doi.org/10.5194/bg-20-3555-2023, 2023
Short summary
Short summary
Physical soil erosion and particulate carbon, nitrogen and phosphorus loss modules were incorporated into the process-oriented hydro-biogeochemical model CNMM-DNDC to realize the accurate simulation of water-induced erosion and subsequent particulate nutrient losses at high spatiotemporal resolution.
Ivan Cornut, Nicolas Delpierre, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, Otavio Campoe, Jose Luiz Stape, Vitoria Fernanda Santos, and Guerric le Maire
Biogeosciences, 20, 3093–3117, https://doi.org/10.5194/bg-20-3093-2023, https://doi.org/10.5194/bg-20-3093-2023, 2023
Short summary
Short summary
Potassium is an essential element for living organisms. Trees are dependent upon this element for certain functions that allow them to build their trunks using carbon dioxide. Using data from experiments in eucalypt plantations in Brazil and a simplified computer model of the plantations, we were able to investigate the effect that a lack of potassium can have on the production of wood. Understanding nutrient cycles is useful to understand the response of forests to environmental change.
Ivan Cornut, Guerric le Maire, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, and Nicolas Delpierre
Biogeosciences, 20, 3119–3135, https://doi.org/10.5194/bg-20-3119-2023, https://doi.org/10.5194/bg-20-3119-2023, 2023
Short summary
Short summary
After simulating the effects of low levels of potassium on the canopy of trees and the uptake of carbon dioxide from the atmosphere by leaves in Part 1, here we tried to simulate the way the trees use the carbon they have acquired and the interaction with the potassium cycle in the tree. We show that the effect of low potassium on the efficiency of the trees in acquiring carbon is enough to explain why they produce less wood when they are in soils with low levels of potassium.
Xiaojuan Yang, Peter Thornton, Daniel Ricciuto, Yilong Wang, and Forrest Hoffman
Biogeosciences, 20, 2813–2836, https://doi.org/10.5194/bg-20-2813-2023, https://doi.org/10.5194/bg-20-2813-2023, 2023
Short summary
Short summary
We evaluated the performance of a land surface model (ELMv1-CNP) that includes both nitrogen (N) and phosphorus (P) limitation on carbon cycle processes. We show that ELMv1-CNP produces realistic estimates of present-day carbon pools and fluxes. We show that global C sources and sinks are significantly affected by P limitation. Our study suggests that introduction of P limitation in land surface models is likely to have substantial consequences for projections of future carbon uptake.
Kevin R. Wilcox, Scott L. Collins, Alan K. Knapp, William Pockman, Zheng Shi, Melinda D. Smith, and Yiqi Luo
Biogeosciences, 20, 2707–2725, https://doi.org/10.5194/bg-20-2707-2023, https://doi.org/10.5194/bg-20-2707-2023, 2023
Short summary
Short summary
The capacity for carbon storage (C capacity) is an attribute that determines how ecosystems store carbon in the future. Here, we employ novel data–model integration techniques to identify the carbon capacity of six grassland sites spanning the US Great Plains. Hot and dry sites had low C capacity due to less plant growth and high turnover of soil C, so they may be a C source in the future. Alternately, cooler and wetter ecosystems had high C capacity, so these systems may be a future C sink.
Ara Cho, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Richard Wehr, and Maarten C. Krol
Biogeosciences, 20, 2573–2594, https://doi.org/10.5194/bg-20-2573-2023, https://doi.org/10.5194/bg-20-2573-2023, 2023
Short summary
Short summary
Carbonyl sulfide (COS) is a useful constraint for estimating photosynthesis. To simulate COS leaf flux better in the SiB4 model, we propose a novel temperature function for enzyme carbonic anhydrase (CA) activity and optimize conductances using observations. The optimal activity of CA occurs below 40 °C, and Ball–Woodrow–Berry parameters are slightly changed. These reduce/increase uptakes in the tropics/higher latitudes and contribute to resolving discrepancies in the COS global budget.
Yunyao Ma, Bettina Weber, Alexandra Kratz, José Raggio, Claudia Colesie, Maik Veste, Maaike Y. Bader, and Philipp Porada
Biogeosciences, 20, 2553–2572, https://doi.org/10.5194/bg-20-2553-2023, https://doi.org/10.5194/bg-20-2553-2023, 2023
Short summary
Short summary
We found that the modelled annual carbon balance of biocrusts is strongly affected by both the environment (mostly air temperature and CO2 concentration) and physiology, such as temperature response of respiration. However, the relative impacts of these drivers vary across regions with different climates. Uncertainty in driving factors may lead to unrealistic carbon balance estimates, particularly in temperate climates, and may be explained by seasonal variation of physiology due to acclimation.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and T. Luke Smallman
Biogeosciences, 20, 2455–2484, https://doi.org/10.5194/bg-20-2455-2023, https://doi.org/10.5194/bg-20-2455-2023, 2023
Short summary
Short summary
This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Libo Wang, Vivek K. Arora, Paul Bartlett, Ed Chan, and Salvatore R. Curasi
Biogeosciences, 20, 2265–2282, https://doi.org/10.5194/bg-20-2265-2023, https://doi.org/10.5194/bg-20-2265-2023, 2023
Short summary
Short summary
Plant functional types (PFTs) are groups of plant species used to represent vegetation distribution in land surface models. There are large uncertainties associated with existing methods for mapping land cover datasets to PFTs. This study demonstrates how fine-resolution tree cover fraction and land cover datasets can be used to inform the PFT mapping process and reduce the uncertainties. The proposed largely objective method makes it easier to implement new land cover products in models.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
Short summary
Short summary
Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Veronika Kronnäs, Klas Lucander, Giuliana Zanchi, Nadja Stadlinger, Salim Belyazid, and Cecilia Akselsson
Biogeosciences, 20, 1879–1899, https://doi.org/10.5194/bg-20-1879-2023, https://doi.org/10.5194/bg-20-1879-2023, 2023
Short summary
Short summary
In a future climate, extreme droughts might become more common. Climate change and droughts can have negative effects on soil weathering and plant health.
In this study, climate change effects on weathering were studied on sites in Sweden using the model ForSAFE, a climate change scenario and an extreme drought scenario. The modelling shows that weathering is higher during summer and increases with global warming but that weathering during drought summers can become as low as winter weathering.
Agustín Sarquis and Carlos A. Sierra
Biogeosciences, 20, 1759–1771, https://doi.org/10.5194/bg-20-1759-2023, https://doi.org/10.5194/bg-20-1759-2023, 2023
Short summary
Short summary
Although plant litter is chemically and physically heterogenous and undergoes multiple transformations, models that represent litter dynamics often ignore this complexity. We used a multi-model inference framework to include information content in litter decomposition datasets and studied the time it takes for litter to decompose as measured by the transit time. In arid lands, the median transit time of litter is about 3 years and has a negative correlation with mean annual temperature.
Qi Guan, Jing Tang, Lian Feng, Stefan Olin, and Guy Schurgers
Biogeosciences, 20, 1635–1648, https://doi.org/10.5194/bg-20-1635-2023, https://doi.org/10.5194/bg-20-1635-2023, 2023
Short summary
Short summary
Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
Vivek K. Arora, Christian Seiler, Libo Wang, and Sian Kou-Giesbrecht
Biogeosciences, 20, 1313–1355, https://doi.org/10.5194/bg-20-1313-2023, https://doi.org/10.5194/bg-20-1313-2023, 2023
Short summary
Short summary
The behaviour of natural systems is now very often represented through mathematical models. These models represent our understanding of how nature works. Of course, nature does not care about our understanding. Since our understanding is not perfect, evaluating models is challenging, and there are uncertainties. This paper illustrates this uncertainty for land models and argues that evaluating models in light of the uncertainty in various components provides useful information.
Kamal Nyaupane, Umakant Mishra, Feng Tao, Kyongmin Yeo, William J. Riley, Forrest M. Hoffman, and Sagar Gautam
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-50, https://doi.org/10.5194/bg-2023-50, 2023
Revised manuscript accepted for BG
Short summary
Short summary
Representing soil organic carbon (SOC) dynamics in Earth system models (ESMs) is a key source of uncertainty in predicting carbon climate feedbacks. We used machine learning to develop and compare predictive relationships in observations and ESMs. We found different relationships between environmental factors and SOC stocks in observations and ESMs. SOC predictions in ESMs may be improved by representing the functional relationships of environmental controllers consistent with observations.
Benjamin S. Felzer
Biogeosciences, 20, 573–587, https://doi.org/10.5194/bg-20-573-2023, https://doi.org/10.5194/bg-20-573-2023, 2023
Short summary
Short summary
The future of the terrestrial carbon sink depends upon the legacy of past land use, which determines the stand age of the forest and nutrient levels in the soil, both of which affect vegetation growth. This study uses a modeling approach to determine the effects of land-use legacy in the conterminous US from 1750 to 2099. Not accounting for land legacy results in a low carbon sink and high biomass, while water variables are not as highly affected.
Cited articles
Baraloto, C., Timothy Paine, C. E., Poorter, L., Beauchene, J., Bonal, D.,
Domenach, A.-M., Hérault, B., Patiño, S., Roggy, J.-C., and Chave,
J.: Decoupled leaf and stem economics in rain forest trees, Ecol. Lett.,
13, 1338–1347, 2010.
Bonan, G. B., Oleson, K. W., Fisher, R. A., Lasslop, G., and Reichstein, M.:
Reconciling leaf physiological traits and canopy flux data: Use of the TRY
and FLUXNET databases in the Community Land Model version 4, J. Geophys.
Res., 117, G02026, https://doi.org/10.1029/2011JG001913, 2012.
Booth, B. B. B., Jones, C. D., Collins, M., Totterdell, I. J., Cox, P. M.,
Sitch, S., Huntingford, C., Betts, R. A., Harris, G. R., and Lloyd, J.: High
sensitivity of future global warming to land carbon cycle processes,
Environ. Res. Lett., 7, 024002, https://doi.org/10.1088/1748-9326/7/2/024002, 2012.
Chave, J.: Neutral theory and community ecology, Ecol. Lett., 7,
241–253, 2004.
Chave, J., Condit, R., Lao, S., Caspersen, J. P., Foster, R. B., and Hubbell,
S. P.: Spatial and temporal variation of biomass in a tropical forest:
results from a large census plot in Panama, J. Ecol., 91, 240–252, 2003.
Chave, J., Réjou-Méchain, M., Búrquez, A., Chidumayo, E.,
Colgan, M. S., Delitti, W. B. C., Duque, A., Eid, T., Fearnside, P. M.,
Goodman, R. C., Henry, M., Martínez-Yrízar, A., Mugasha, W. A.,
Muller-Landau, H. C., Mencuccini, M., Nelson, B. W., Ngomanda, A., Nogueira,
E. M., Ortiz-Malavassi, E., Pélissier, R., Ploton, P., Ryan, C. M.,
Saldarriaga, J. G., and Vieilledent, G.: Improved allometric models to
estimate the aboveground biomass of tropical trees, Glob. Change Biol.,
20, 3177–3190, 2014.
Chesson, P.: Mechanisms of Maintenance of Species Diversity, Annu. Rev.
Ecol. Syst., 31, 343–366, 2000.
Christoffersen, B. O., Gloor, M., Fauset, S., Fyllas, N. M., Galbraith, D. R., Baker, T. R., Kruijt, B., Rowland, L., Fisher, R. A., Binks, O. J., Sevanto, S., Xu, C., Jansen, S., Choat, B., Mencuccini, M., McDowell, N. G., and Meir, P.: Linking hydraulic traits to tropical forest function in a size-structured and trait-driven model (TFS v.1-Hydro), Geosci. Model Dev., 9, 4227–4255, https://doi.org/10.5194/gmd-9-4227-2016, 2016.
Clark, A. T., Lehman, C., and Tilman, D.: Identifying mechanisms that
structure ecological communities by snapping model parameters to empirically
observed tradeoffs, Ecol. Lett., 21, 494–505, 2018.
Clark, M. P., Bierkens, M. F. P., Samaniego, L., Woods, R. A., Uijlenhoet, R., Bennett, K. E., Pauwels, V. R. N., Cai, X., Wood, A. W., and Peters-Lidard, C. D.: The evolution of process-based hydrologic models: historical challenges and the collective quest for physical realism, Hydrol. Earth Syst. Sci., 21, 3427–3440, https://doi.org/10.5194/hess-21-3427-2017, 2017.
Collier, N., Hoffman, F. M., Lawrence, D. M., Keppel-Aleks, G., Koven, C.
D., Riley, W. J., Mu, M., and Randerson, J. T.: The International Land Model
Benchmarking (ILAMB) System: Design, Theory, and Implementation, J. Adv.
Model. Earth Sy., 10, 2731–2754, 2018.
Condit, R., Pérez, R., Lao, S., Aguilar, S., and Hubbell, S. P.:
Demographic trends and climate over 35 years in the Barro Colorado 50 ha
plot, Forest Ecosystems, 4, 17, https://doi.org/10.1186/s40663-017-0103-1, 2017.
Connell, J. H.: On the role of natural enemies in preventing competitive
exclusion in some marine animals and in rain forest trees, Dynamics of
populations, 298, 298–312, 1971.
Cox, P. M., Betts, R. A., Jones, C. D., Spall, S. A., and Totterdell, I. J.:
Acceleration of global warming due to carbon-cycle feedbacks in a coupled
climate model, Nature, 408, 184–187, 2000.
CTSM Development Team: ESCOMP/CTSM: Update documentation for release-clm5.0 branch, and fix issues with no-anthro surface dataset creation (Version release-clm5.0.34), Zenodo, https://doi.org/10.5281/zenodo.3739617, 2020.
Detto, M., Baldocchi, D., and Katul, G. G.: Scaling Properties of
Biologically Active Scalar Concentration Fluctuations in the Atmospheric
Surface Layer over a Managed Peatland, Bound.-Lay. Meteorol., 136,
407–430, 2010.
Detto, M., Wright, S. J., Calderón, O., and Muller-Landau, H. C.:
Resource acquisition and reproductive strategies of tropical forest in
response to the El Niño–Southern Oscillation, Nat. Commun.,
9, 913, https://doi.org/10.1038/s41467-018-03306-9, 2018.
Dietze, M. C., Serbin, S. P., Davidson, C., Desai, A. R., Feng, X., Kelly,
R., Kooper, R., LeBauer, D., Mantooth, J., McHenry, K., and Wang, D.: A
quantitative assessment of a terrestrial biosphere model's data needs across
North American biomes, J. Geophys. Res.-Biogeo., 119, 286–300,
https://doi.org/10.1002/2013JG002392, 2014.
E3SM Project: Energy Exascale Earth System Model, Computer Software, https://doi.org/10.11578/E3SM/dc.20180418.36, 2018.
Fan, Y., Clark, M., Lawrence, D. M., Swenson, S., Band, L. E., Brantley, S.
L., Brooks, P. D., Dietrich, W. E., Flores, A., Grant, G., Kirchner, J. W.,
Mackay, D. S., McDonnell, J. J., Milly, P. C. D., Sullivan, P. L., Tague,
C., Ajami, H., Chaney, N., Hartmann, A., Hazenberg, P., McNamara, J.,
Pelletier, J., Perket, J., Rouholahnejad-Freund, E., Wagener, T., Zeng, X.,
Beighley, E., Buzan, J., Huang, M., Livneh, B., Mohanty, B. P., Nijssen, B.,
Safeeq, M., Shen, C., Verseveld, W., Volk, J., and Yamazaki, D.: Hillslope
Hydrology in Global Change Research and Earth System Modeling, Water Resour.
Res., 55, 1737–1772, 2019.
Farrior, C. E., Bohlman, S. A., Hubbell, S., and Pacala, S. W.: Dominance of
the suppressed: Power-law size structure in tropical forests, Science,
351, 155–157, 2016.
FATES Development Team: Functionally-Assembled Terrestrial Ecosystem Simulator (commit 0bc7a5d), Zenodo, https://doi.org/10.5281/zenodo.3875687, 2019.
FATES Development Team: The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) (Version sci.1.35.5_api.11.0.0), Zenodo, https://doi.org/10.5281/zenodo.3825474, 2020.
Faybishenko, B., Paton, S., Powell, T., Knox, R., Pastorello, G.,
Varadharajan, C., Christianson, D., and Agarwal, D.: QA/QC-ed BCI
meteorological drivers, NGEE – Tropics, https://doi.org/10.15486/NGT/1423307, 2018.
Fisher, R. A. and Koven, C. D.: Perspectives on the future of Land Surface
Models and the challenges of representing complex terrestrial systems,
J. Adv. Model. Earth Sy., https://doi.org/10.1029/2018MS001453, online first,
2020.
Fisher, R. A., McDowell, N., Purves, D., Moorcroft, P., Sitch, S., Cox, P.,
Huntingford, C., Meir, P., and Woodward, F. I.: Assessing uncertainties in a
second-generation dynamic vegetation model caused by ecological scale
limitations, New Phytol., 187, 666–681, 2010.
Fisher, R. A., Muszala, S., Verteinstein, M., Lawrence, P., Xu, C., McDowell, N. G., Knox, R. G., Koven, C., Holm, J., Rogers, B. M., Spessa, A., Lawrence, D., and Bonan, G.: Taking off the training wheels: the properties of a dynamic vegetation model without climate envelopes, CLM4.5(ED), Geosci. Model Dev., 8, 3593–3619, https://doi.org/10.5194/gmd-8-3593-2015, 2015.
Fisher, R. A., Koven, C. D., Anderegg, W. R. L., Christoffersen, B. O.,
Dietze, M. C., Farrior, C. E., Holm, J. A., Hurtt, G. C., Knox, R. G.,
Lawrence, P. J., Lichstein, J. W., Longo, M., Matheny, A. M., Medvigy, D.,
Muller-Landau, H. C., Powell, T. L., Serbin, S. P., Sato, H., Shuman, J. K.,
Smith, B., Trugman, A. T., Viskari, T., Verbeeck, H., Weng, E., Xu, C., Xu,
X., Zhang, T., and Moorcroft, P. R.: Vegetation demographics in Earth System
Models: A review of progress and priorities, Glob. Change Biol., 24,
35–54, 2018.
Friedlingstein, P., Meinshausen, M., Arora, V. K., Jones, C. D., Anav, A.,
Liddicoat, S. K., and Knutti, R.: Uncertainties in CMIP5 climate projections
due to carbon cycle feedbacks, J. Climate, 27, 511–526,
https://doi.org/10.1175/JCLI-D-12-00579.1, 2013.
Friend, A. D., Lucht, W., Rademacher, T. T., Keribin, R., Betts, R., Cadule,
P., Ciais, P., Clark, D. B., Dankers, R., Falloon, P. D., Ito, A., Kahana,
R., Kleidon, A., Lomas, M. R., Nishina, K., Ostberg, S., Pavlick, R.,
Peylin, P., Schaphoff, S., Vuichard, N., Warszawski, L., Wiltshire, A., and
Woodward, F. I.: Carbon residence time dominates uncertainty in terrestrial
vegetation responses to future climate and atmospheric CO2, P.
Natl. Acad. Sci. USA, 111, 3280–3285, 2014.
Golaz, J., Caldwell, P. M., Van Roekel, L. P., Petersen, M. R., Tang, Q.,
Wolfe, J. D., Abeshu, G., Anantharaj, V., Asay-Davis, X. S., Bader, D. C.,
Baldwin, S. A., Bisht, G., Bogenschutz, P. A., Branstetter, M., Brunke, M.
A., Brus, S. R., Burrows, S. M., Cameron-Smith, P. J., Donahue, A. S.,
Deakin, M., Easter, R. C., Evans, K. J., Feng, Y., Flanner, M., Foucar, J.
G., Fyke, J. G., Griffin, B. M., Hannay, C., Harrop, B. E., Hoffman, M. J.,
Hunke, E. C., Jacob, R. L., Jacobsen, D. W., Jeffery, N., Jones, P. W.,
Keen, N. D., Klein, S. A., Larson, V. E., Leung, L. R., Li, H., Lin, W.,
Lipscomb, W. H., Ma, P., Mahajan, S., Maltrud, M. E., Mametjanov, A.,
McClean, J. L., McCoy, R. B., Neale, R. B., Price, S. F., Qian, Y., Rasch,
P. J., Reeves Eyre, J. E. J., Riley, W. J., Ringler, T. D., Roberts, A. F.,
Roesler, E. L., Salinger, A. G., Shaheen, Z., Shi, X., Singh, B., Tang, J.,
Taylor, M. A., Thornton, P. E., Turner, A. K., Veneziani, M., Wan, H., Wang,
H., Wang, S., Williams, D. N., Wolfram, P. J., Worley, P. H., Xie, S., Yang,
Y., Yoon, J., Zelinka, M. D., Zender, C. S., Zeng, X., Zhang, C., Zhang, K.,
Zhang, Y., Zheng, X., Zhou, T., and Zhu, Q.: The DOE E3SM Coupled Model
Version 1: Overview and Evaluation at Standard Resolution, J. Adv. Model.
Earth Sy., 108, 2089–2129, https://doi.org/10.1029/2018MS001603, 2019.
Gregory, J. M., Jones, C. D., Cadule, P., and Friedlingstein, P.: Quantifying
Carbon Cycle Feedbacks, J. Climate, 22, 5232–5250, 2009.
Gu, L., Norby, R., Haworth, I., Jensen, A., Turner, B., Walker, A., Warren,
J., Weston, D., and Winter, K.: Photosynthetic parameters and nutrient
content of trees at the Panama crane sites, NGEE – Tropics, https://doi.org/10.15486/NGT/1255260,
2016.
Huang, M., Xu, Y., Longo, M., Keller, M., Knox, R., Koven, C., and Fisher, R.: Assessing impacts of selective logging on water, energy, and carbon budgets and ecosystem dynamics in Amazon forests using the Functionally Assembled Terrestrial Ecosystem Simulator, Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-129, in review, 2019.
Hubbell, S. P.: The Unified Neutral Theory of Biodiversity and Biogeography
(MPB-32), in: Monographs in Population Biology, Vol. 32, Princeton University Press, New Jersey, USA, https://doi.org/10.1515/9781400837526, 2011.
Hubbell, S. P., Foster, R. B., O'Brien, S. T., Harms, K. E., Condit, R.,
Wechsler, B., Wright, S. J., and de Lao, S. L.: Light-Gap Disturbances,
Recruitment Limitation, and Tree Diversity in a Neotropical Forest, Science,
283, 554–557, 1999.
Huntingford, C., Zelazowski, P., Galbraith, D., Mercado, L. M., Sitch, S.,
Fisher, R., Lomas, M., Walker, A. P., Jones, C. D., Booth, B. B. B., Malhi,
Y., Hemming, D., Kay, G., Good, P., Lewis, S. L., Phillips, O. L., Atkin, O.
K., Lloyd, J., Gloor, E., Zaragoza-Castells, J., Meir, P., Betts, R.,
Harris, P. P., Nobre, C., Marengo, J., and Cox, P. M.: Simulated resilience
of tropical rainforests to CO2-induced climate change, Nat. Geosci., 6,
268–273, 2013.
Janzen, D. H.: Herbivores and the Number of Tree Species in Tropical
Forests, Am. Nat., 104, 501–528, 1970.
Johnson, D. J., Needham, J., Xu, C., Massoud, E. C., Davies, S. J.,
Anderson-Teixeira, K. J., Bunyavejchewin, S., Chambers, J. Q., Chang-Yang,
C.-H., Chiang, J.-M., Chuyong, G. B., Condit, R., Cordell, S., Fletcher, C.,
Giardina, C. P., Giambelluca, T. W., Gunatilleke, N., Gunatilleke, S.,
Hsieh, C.-F., Hubbell, S., Inman-Narahari, F., Kassim, A. R., Katabuchi, M.,
Kenfack, D., Litton, C. M., Lum, S., Mohamad, M., Nasardin, M., Ong, P. S.,
Ostertag, R., Sack, L., Swenson, N. G., Sun, I. F., Tan, S., Thomas, D. W.,
Thompson, J., Umaña, M. N., Uriarte, M., Valencia, R., Yap, S.,
Zimmerman, J., McDowell, N. G., and McMahon, S. M.: Climate sensitive
size-dependent survival in tropical trees, Nat. Ecol. Evol., 2, 1436–1442,
2018.
Jones, C., Lowe, J., Liddicoat, S., and Betts, R.: Committed terrestrial
ecosystem changes due to climate change, Nat. Geosci., 2, 484–487, 2009.
Korobeynikov, A., Shlemov, A., Usevich, K., and Golyandina, N.: A Collection
of Methods for Singular Spectrum Analysis, Package “Rssa.”, available at:
https://cran.r-project.org/web/packages/Rssa/index.html (last access: 15 May 2020),
2017.
Koven, C.: FATES Parameters and Output for Parameter Sensitivity at the Panama Barro Colorado Island Testbed, NGEE – Tropics, https://doi.org/10.15486/ngt/1569647, 2019a.
Koven, C.: 600 Years of Forest Dynamics using FATES model at Barro Colorado Island, Panama, TIB, https://doi.org/10.5446/43627, 2019b.
Koven, C.: NGEET/testbeds: version 1.0 of testbeds scripts, as used in FATES BCI analysis (Version v1.0), Zenodo, https://doi.org/10.5281/zenodo.3785705, 2020a.
Koven, C.: ckoven/runscripts: version 1.0 of ckoven/runscripts (Version v1.0), Zenodo, https://doi.org/10.5281/zenodo.3785703, 2020b.
Koven, C. D., Chambers, J. Q., Georgiou, K., Knox, R., Negron-Juarez, R., Riley, W. J., Arora, V. K., Brovkin, V., Friedlingstein, P., and Jones, C. D.: Controls on terrestrial carbon feedbacks by productivity versus turnover in the CMIP5 Earth System Models, Biogeosciences, 12, 5211–5228, https://doi.org/10.5194/bg-12-5211-2015, 2015.
Kovenock, M.: Ecosystem and large-scale climate impacts of plant leaf
dynamics, PhD, University of Washington, available at:
https://digital.lib.washington.edu/researchworks/handle/1773/44061 (last access: 15 May 2020), 2019.
Lasslop, G., Reichstein, M., Papale, D., Richardson, A. D., Arneth, A.,
Barr, A., Stoy, P., and Wohlfahrt, G.: Separation of net ecosystem exchange
into assimilation and respiration using a light response curve approach:
critical issues and global evaluation, Glob. Change Biol., 16, 187–208,
2010.
Lawrence, D. M., Fisher, R. A., Koven, C. D., Oleson, K. W., Swenson, S. C., Bonan, G., Collier, N.,
Ghimire, B., van Kampenhout, L., Kennedy, D., Kluzek, E., Lawrence, P. J., Li, F., Li, H., Lombardozzi, D.,
Riley, W. J., Sacks, W. J., Shi, M., Vertenstein, M., Wieder, W. R., Xu, C., Ali, A. A., Badger, A. M., Bisht, G.,
van den Broeke, M., Brunke, M. A., Burns, S. P., Buzan, J., Clark, M., Craig, A.,
Dahlin, K., Drewniak, B., Fisher, J. B., Flanner, M., Fox, A. M., Gentine, P.,
Hoffman, F., Keppel-Aleks, G., Knox, R., Kumar, S., Lenaerts, J., Leung, L. R.,
Lipscomb, W. H., Lu, Y., Pandey, A., Pelletier, J. D., Perket, J., Randerson, J. T.,
Ricciuto, D. M., Sanderson, B. M., Slater, A., Subin, Z. M., Tang, J., Thomas, R. Q.,
Val Martin, M., and Zeng, X.: The Community Land Model version 5: Description of new features, benchmarking, and impact of forcing uncertainty, J. Adv. Model. Earth Sy., 11, 4245–4287, https://doi.org/10.1029/2018MS001583, 2019.
Levine, N. M., Zhang, K., Longo, M., Baccini, A., Phillips, O. L., Lewis, S.
L., Alvarez-Dávila, E., de Andrade, A. C. S., Brienen, R. J. W., Erwin,
T. L., Feldpausch, T. R., Lorenzo Monteagudo Mendoza, A., Nuñez Vargas, P., Prieto, A., Silva-Espejo, J. E., Malhi, Y., and Moorcroft, P. R.: Ecosystem heterogeneity determines the ecological
resilience of the Amazon to climate change, P. Natl.
Acad. Sci. USA, 113, 793–797, 2016.
Lloyd, J., Patiño, S., Paiva, R. Q., Nardoto, G. B., Quesada, C. A., Santos, A. J. B., Baker, T. R., Brand, W. A., Hilke, I., Gielmann, H., Raessler, M., Luizão, F. J., Martinelli, L. A., and Mercado, L. M.: Optimisation of photosynthetic carbon gain and within-canopy gradients of associated foliar traits for Amazon forest trees, Biogeosciences, 7, 1833–1859, https://doi.org/10.5194/bg-7-1833-2010, 2010.
López-de-Lacalle, J.: Detection of Outliers in Time Series, Package
“tsoutliers”, available at:
https://cran.r-project.org/web/packages/tsoutliers/index.html (last access: 15 May 2020), 2019.
Luo, Y. Q., Randerson, J. T., Abramowitz, G., Bacour, C., Blyth, E., Carvalhais, N., Ciais, P., Dalmonech, D., Fisher, J. B., Fisher, R., Friedlingstein, P., Hibbard, K., Hoffman, F., Huntzinger, D., Jones, C. D., Koven, C., Lawrence, D., Li, D. J., Mahecha, M., Niu, S. L., Norby, R., Piao, S. L., Qi, X., Peylin, P., Prentice, I. C., Riley, W., Reichstein, M., Schwalm, C., Wang, Y. P., Xia, J. Y., Zaehle, S., and Zhou, X. H.: A framework for benchmarking land models, Biogeosciences, 9, 3857–3874, https://doi.org/10.5194/bg-9-3857-2012, 2012.
Malhi, Y., Aragão, L. E. O. C., Galbraith, D., Huntingford, C., Fisher,
R., Zelazowski, P., Sitch, S., McSweeney, C., and Meir, P.: Exploring the
likelihood and mechanism of a climate-change-induced dieback of the Amazon
rainforest, P. Natl. Acad. Sci. USA, 106, 20610–20615, 2009.
Martínez Cano, I., Muller-Landau, H. C., Wright, S. J., Bohlman, S. A., and Pacala, S. W.: Tropical tree height and crown allometries for the Barro Colorado Nature Monument, Panama: a comparison of alternative hierarchical models incorporating interspecific variation in relation to life history traits, Biogeosciences, 16, 847–862, https://doi.org/10.5194/bg-16-847-2019, 2019.
Massoud, E. C., Xu, C., Fisher, R. A., Knox, R. G., Walker, A. P., Serbin, S. P., Christoffersen, B. O., Holm, J. A., Kueppers, L. M., Ricciuto, D. M., Wei, L., Johnson, D. J., Chambers, J. Q., Koven, C. D., McDowell, N. G., and Vrugt, J. A.: Identification of key parameters controlling demographically structured vegetation dynamics in a land surface model: CLM4.5(FATES), Geosci. Model Dev., 12, 4133–4164, https://doi.org/10.5194/gmd-12-4133-2019, 2019.
McDowell, N., Allen, C. D., Anderson-Teixeira, K., Brando, P., Brienen, R.,
Chambers, J., Christoffersen, B., Davies, S., Doughty, C., Duque, A.,
Espirito-Santo, F., Fisher, R., Fontes, C. G., Galbraith, D., Goodsman, D.,
Grossiord, C., Hartmann, H., Holm, J., Johnson, D. J., Kassim, A. R.,
Keller, M., Koven, C., Kueppers, L., Kumagai, T. 'omi, Malhi, Y., McMahon,
S. M., Mencuccini, M., Meir, P., Moorcroft, P., Muller-Landau, H. C.,
Phillips, O. L., Powell, T., Sierra, C. A., Sperry, J., Warren, J., Xu, C.,
and Xu, X.: Drivers and mechanisms of tree mortality in moist tropical
forests, New Phytol., 219, 851–869, 2018.
Meakem, V., Tepley, A. J., Gonzalez-Akre, E. B., Herrmann, V.,
Muller-Landau, H. C., Wright, S. J., Hubbell, S. P., Condit, R., and
Anderson-Teixeira, K. J.: Role of tree size in moist tropical forest carbon
cycling and water deficit responses, New Phytol., 219, 947–958, 2018.
Moorcroft, P. R., Hurtt, G. C., and Pacala, S. W.: A method for scaling
vegetation dynamics: The ecosystem demography model (ED), Ecol. Monogr.,
71, 557–585, 2001.
Needham, J. F., Johnson, D. J., Chang-Yang, C., Anderson-Teixeira, K. J., Bourg, N. A., Bunyavejchewin, S., Butt, N., Cao, M., Cardenas, D., Chen, Y., Chuyong, G., Dattaraja, H., Davies, S. J., Duque, A., Ewango, C. E. N., Fernando, E. S., Fisher, R. A., Fletcher, C. D., Foster, R., Hao, Z., Hart, T., Hsieh, C., Hubbell, S. P., Itoh, A., Kenfack, D., Koven, C. D., Larson, A. J., Lutz, J. A., Makana, J., Malhi, Y., Marthews, T. R., McShea, W., Mohamad, M. Bt., Morecroft, M. D., Norden, N., Parker, G., Shringi, A., Sukumar, R., Sun, I., Suresh, H., Tan, S., Thomas, D. W., Thompson, J., Uriarte, M., Valencia, R., Yao, T., Yap, S. L., Yuan, Z., Yuehua, H., Zimmerman, J. K., Zuleta, D., and McMahon, S. M.: Demographic functional types determine carbon dynamics of global forests, in preparation, 2020.
O'Brien, S. T., Hubbell, S. P., Spiro, P., Condit, R., and Foster, R. B.:
Diameter, Height, Crown, and Age Relationship in Eight Neotropical Tree
Species, Ecology, 76, 1926–1939, 1995.
Oleson, K. W., Lawrence, D. M., Bonan, G. B., Drewniak, B., Huang, M.,
Koven, C. D., Levis, S., Li, F., Riley, W. J., Subin, Z. M., Swenson, S. C.,
Thornton, P. E., Bozbiyik, A., Fisher, R., Heald, C. L., Kluzek, E.,
Lamarque, J.-F., Lawrence, P. J., Leung, L. R., Lipscomb, W., Muszala, S.,
Ricciuto, D. M., Sacks, W., Tang, J., and Yang, Z.-L.: Technical Description
of version 4.5 of the Community Land Model (CLM), National Center for
Atmospheric Research, Boulder, Colorado, 2013.
Osnas, J. L. D., Katabuchi, M., Kitajima, K., Wright, S. J., Reich, P. B.,
Van Bael, S. A., Kraft, N. J. B., Samaniego, M. J., Pacala, S. W., and
Lichstein, J. W.: Divergent drivers of leaf trait variation within species,
among species, and among functional groups, P. Natl. Acad. Sci. USA,
115, 5480–5485, 2018.
Poorter, L., Bongers, L., and Bongers, F.: Architecture of 54 moist-forest
tree species: traits, trade-offs, and functional groups, Ecology, 87,
1289–1301, 2006.
Powell, T. L., Galbraith, D. R., Christoffersen, B. O., Harper, A.,
Imbuzeiro, H. M. A., Rowland, L., Almeida, S., Brando, P. M., da Costa, A.
C. L., Costa, M. H., Levine, N. M., Malhi, Y., Saleska, S. R., Sotta, E.,
Williams, M., Meir, P., and Moorcroft, P. R.: Confronting model predictions
of carbon fluxes with measurements of Amazon forests subjected to
experimental drought, New Phytol., 200, 350–365, 2013.
Powell, T. L., Koven, C. D., Johnson, D. J., Faybishenko, B., Fisher, R. A.,
Knox, R. G., McDowell, N. G., Condit, R., Hubbell, S. P., Wright, S. J.,
Chambers, J. Q., and Kueppers, L. M.: Variation in hydroclimate sustains
tropical forest biomass and promotes functional diversity, New Phytol.,
219, 932–946, 2018.
Purves, D. W., Lichstein, J. W., Strigul, N., and Pacala, S. W.: Predicting
and understanding forest dynamics using a simple tractable model, P.
Natl. Acad. Sci. USA, 105, 17018–17022, 2008.
Raczka, B., Dietze, M. C., Serbin, S. P., and Davis, K. J.: What Limits
Predictive Certainty of Long-Term Carbon Uptake?, J. Geophys. Res.-Biogeo., 123, 3570–3588, 2018.
Rogers, A.: The use and misuse of Vc,max in Earth System Models, Photosynth.
Res., 119, 15–29, 2014.
Rogers, A., Serbin, S., Ely, K., Wu, J., Wolfe, B., Dickman, T., Collins,
A., Detto, M., Grossiord, C., McDowell, N., and Michaletz, S.: CO2 response
(ACi) gas exchange, calculated Vcmax & Jmax parameters, Feb2016–May2016,
PA-SLZ, PA-PNM: Panama, NGEE – Tropics, https://doi.org/10.15486/NGT/1411867, 2017.
Ryan, J. A., Ulrich, J. M., Bennett, R., and Joy, C.: eXtensible Time Series,
Package “xts.”, available at:
https://cran.r-project.org/web/packages/xts/ (last access: 15 May 2020), 2018.
Sakschewski, B., von Bloh, W., Boit, A., Poorter, L., Peña-Claros, M.,
Heinke, J., Joshi, J., and Thonicke, K.: Resilience of Amazon forests emerges
from plant trait diversity, Nat. Clim. Change, 6, 1032, https://doi.org/10.1038/nclimate3109, 2016.
Saldarriaga, J. G., West, D. C., Tharp, M. L., and Uhl, C.: Long-Term
Chronosequence of Forest Succession in the Upper Rio Negro of Colombia and
Venezuela, J. Ecol., 76, 938–958, 1988.
Sevanto, S., McDowell, N. G., Dickman, L. T., Pangle, R., and Pockman, W. T.:
How do trees die? A test of the hydraulic failure and carbon starvation
hypotheses, Plant Cell Environ., 37, 153–161, 2014.
Tilman, D., Lehman, C. L., and Thomson, K. T.: Plant diversity and ecosystem
productivity: theoretical considerations, P. Natl. Acad. Sci. USA,
94, 1857–1861, 1997.
Walker, A. P., Zaehle, S., Medlyn, B. E., De Kauwe, M. G., Asao, S.,
Hickler, T., Parton, W., Ricciuto, D., Wang, Y.-P., Wårlind, D., and
Norby, R. J.: Predicting long-term carbon sequestration in response to CO2
enrichment: How and why do current ecosystem models differ?, Global
Biogeochem. Cy., 29, 476–495, https://doi.org/10.1002/2014GB004995, 2015.
Wieder, W. R., Lawrence, D. M., Fisher, R. A., Bonan, G. B., Cheng, S. J.,
Goodale, C. L., Grandy, A. S., Koven, C. D., Lombardozzi, D. L., Oleson, K.
W., and Thomas, R. Q.: Beyond static benchmarking: Using experimental
manipulations to evaluate land model assumptions, Global Biogeochem. Cy., 33, 1289–1309,
https://doi.org/10.1029/2018GB006141, 2019.
Wright, I. J., Reich, P. B., Westoby, M., Ackerly, D. D., Baruch, Z.,
Bongers, F., Cavender-Bares, J., Chapin, T., Cornelissen, J. H. C., Diemer,
M., Flexas, J., Garnier, E., Groom, P. K., Gulias, J., Hikosaka, K., Lamont, B. B., Lee, T., Lee, W., Lusk, C., Midgley, J. J., Navas, M.-L., Niinemets, Ü., Oleksyn, J., Osada, N., Poorter, H., Poot, P., Prior, L., Pyankov, V. I., Roumet, C., Thomas, S. C., Tjoelker, M. G., Veneklaas, E. J., and Villar, R.: The worldwide leaf economics spectrum, Nature, 428,
821–827, 2004.
Wright, S. J., Kitajima, K., Kraft, N. J. B., Reich, P. B., Wright, I. J.,
Bunker, D. E., Condit, R., Dalling, J. W., Davies, S. J., Díaz, S.,
Engelbrecht, B. M. J., Harms, K. E., Hubbell, S. P., Marks, C. O.,
Ruiz-Jaen, M. C., Salvador, C. M., and Zanne, A. E.: Functional traits and
the growth–mortality trade-off in tropical trees, Ecology, 91,
3664–3674, 2010.
Wu, J., Serbin, S. P., Xu, X., Albert, L. P., Chen, M., Meng, R., Saleska,
S. R., and Rogers, A.: The phenology of leaf quality and its within-canopy
variation is essential for accurate modeling of photosynthesis in tropical
evergreen forests, Glob. Change Biol., 23, 4814–4827, 2017.
Wu, J., Rogers, A., Albert, L. P., Ely, K., Prohaska, N., Wolfe, B. T.,
Oliveira Jr., R. C., Saleska, S. R., and Serbin, S. P.: Leaf reflectance
spectroscopy captures variation in carboxylation capacity across species,
canopy environment and leaf age in lowland moist tropical forests, New
Phytol., 224, 663–674, 2019.
Xu, C.: Decoupling correlated and uncorrelated parametric uncertainty
contributions for nonlinear models, Appl. Math. Model., 37, 9950–9969,
2013.
Xu, C. and Gertner, G. Z.: Uncertainty and sensitivity analysis for models
with correlated parameters, Reliab. Eng. Syst. Safe, 93, 1563–1573,
2008.
Xu, X., Medvigy, D., Powers, J. S., Becknell, J. M., and Guan, K.: Diversity
in plant hydraulic traits explains seasonal and inter-annual variations of
vegetation dynamics in seasonally dry tropical forests, New Phytol., 212,
80–95, 2016.
Zeileis, A., Grothendieck, G., Ryan, J. A., Ulrich, J. M., and Andrews, F.:
zoo: S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered
Observations), available at:
https://cran.r-project.org/web/packages/zoo/index.html (last access: 15 May 2020), 2019.
Short summary
Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse ecosystems, yet most Earth system models do not take into account the diversity of plant traits in these forests and how this diversity may govern feedbacks. We present an approach to represent diverse competing plant types within Earth system models, test this approach at a tropical forest site, and explore how the representation of disturbance and competition governs traits of the forest community.
Tropical forests play a crucial role in governing climate feedbacks, and are incredibly diverse...
Altmetrics
Final-revised paper
Preprint