Articles | Volume 19, issue 8
Biogeosciences, 19, 2095–2099, 2022
https://doi.org/10.5194/bg-19-2095-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Biogeosciences, 19, 2095–2099, 2022
https://doi.org/10.5194/bg-19-2095-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Technical note
19 Apr 2022
Technical note
| 19 Apr 2022
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Jarmo Mäkelä et al.
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Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-327, https://doi.org/10.5194/bg-2021-327, 2021
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Soil carbon sequestration has gained traction as a mean to mitigate rising atmospheric CO2 concentrations. Verification of different methods’ efficiency requires good quality measurements and reliable models. We present a straightforward way to include carbon isotope concentrations into soil decomposition and carbon storages. The modifications considerable improve the model behaviour and enables the use of carbon isotopes as trackers for e.g. soil management practices.
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Jarmo Mäkelä, Jürgen Knauer, Mika Aurela, Andrew Black, Martin Heimann, Hideki Kobayashi, Annalea Lohila, Ivan Mammarella, Hank Margolis, Tiina Markkanen, Jouni Susiluoto, Tea Thum, Toni Viskari, Sönke Zaehle, and Tuula Aalto
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We assess the differences of six stomatal conductance formulations, embedded into a land–vegetation model JSBACH, on 10 boreal coniferous evergreen forest sites. We calibrate the model parameters using all six functions in a multi-year experiment, as well as for a separate drought event at one of the sites, using the adaptive population importance sampler. The analysis reveals weaknesses in the stomatal conductance formulation-dependent model behaviour that we are able to partially amend.
Jouni Susiluoto, Maarit Raivonen, Leif Backman, Marko Laine, Jarmo Makela, Olli Peltola, Timo Vesala, and Tuula Aalto
Geosci. Model Dev., 11, 1199–1228, https://doi.org/10.5194/gmd-11-1199-2018, https://doi.org/10.5194/gmd-11-1199-2018, 2018
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Axel Lauer, Colin Jones, Veronika Eyring, Martin Evaldsson, Stefan Hagemann, Jarmo Mäkelä, Gill Martin, Romain Roehrig, and Shiyu Wang
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Geosci. Model Dev., 10, 4665–4691, https://doi.org/10.5194/gmd-10-4665-2017, https://doi.org/10.5194/gmd-10-4665-2017, 2017
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Wetlands are one of the most significant natural sources of the strong greenhouse gas methane. We developed a model that can be used within a larger wetland carbon model to simulate the methane emissions. In this study, we present the model and results of its testing. We found that the model works well with different settings and that the results depend primarily on the rate of input anoxic soil respiration and also on factors that affect the simulated oxygen concentrations in the wetland soil.
Jarmo Mäkelä, Jouni Susiluoto, Tiina Markkanen, Mika Aurela, Heikki Järvinen, Ivan Mammarella, Stefan Hagemann, and Tuula Aalto
Nonlin. Processes Geophys., 23, 447–465, https://doi.org/10.5194/npg-23-447-2016, https://doi.org/10.5194/npg-23-447-2016, 2016
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The land-based hydrological cycle is one of the key processes controlling the growth and wilting of plants and the amount of carbon vegetation can assimilate. Recent studies have shown that many land surface models have biases in this area. We optimized parameters in one such model (JSBACH) and were able to enhance the model performance in many respects, but the response to drought remained unaffected. Further studies into this aspect should include alternative stomatal conductance formulations.
Veronika Eyring, Mattia Righi, Axel Lauer, Martin Evaldsson, Sabrina Wenzel, Colin Jones, Alessandro Anav, Oliver Andrews, Irene Cionni, Edouard L. Davin, Clara Deser, Carsten Ehbrecht, Pierre Friedlingstein, Peter Gleckler, Klaus-Dirk Gottschaldt, Stefan Hagemann, Martin Juckes, Stephan Kindermann, John Krasting, Dominik Kunert, Richard Levine, Alexander Loew, Jarmo Mäkelä, Gill Martin, Erik Mason, Adam S. Phillips, Simon Read, Catherine Rio, Romain Roehrig, Daniel Senftleben, Andreas Sterl, Lambertus H. van Ulft, Jeremy Walton, Shiyu Wang, and Keith D. Williams
Geosci. Model Dev., 9, 1747–1802, https://doi.org/10.5194/gmd-9-1747-2016, https://doi.org/10.5194/gmd-9-1747-2016, 2016
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Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2022-392, https://doi.org/10.5194/acp-2022-392, 2022
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We measured atmospheric ion concentrations continuously in a boreal forest between 2005 and 2021 and observed an increasing inter-annual trend. The increase in cluster ion concentrations can be largely explained by overall decreasing level of anthropogenic aerosols in the boreal forest. This suggests that the role of ions in atmospheric new particle formation may be more important in the future.
Joonatan Ala-Könni, Kukka-Maaria Kohonen, Matti Leppäranta, and Ivan Mammarella
Geosci. Model Dev., 15, 4739–4755, https://doi.org/10.5194/gmd-15-4739-2022, https://doi.org/10.5194/gmd-15-4739-2022, 2022
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Properties of seasonally ice-covered lakes are not currently sufficiently included in global climate models. To fill this gap, this study evaluates three models that could be used to quantify the amount of heat that moves from and into the lake by the air above it and through evaporation of the ice cover. The results show that the complex nature of the surrounding environment as well as difficulties in accurately measuring the surface temperature of ice introduce errors to these models.
Malgorzata Golub, Wim Thiery, Rafael Marcé, Don Pierson, Inne Vanderkelen, Daniel Mercado-Bettin, R. Iestyn Woolway, Luke Grant, Eleanor Jennings, Benjamin M. Kraemer, Jacob Schewe, Fang Zhao, Katja Frieler, Matthias Mengel, Vasiliy Y. Bogomolov, Damien Bouffard, Marianne Côté, Raoul-Marie Couture, Andrey V. Debolskiy, Bram Droppers, Gideon Gal, Mingyang Guo, Annette B. G. Janssen, Georgiy Kirillin, Robert Ladwig, Madeline Magee, Tadhg Moore, Marjorie Perroud, Sebastiano Piccolroaz, Love Raaman Vinnaa, Martin Schmid, Tom Shatwell, Victor M. Stepanenko, Zeli Tan, Bronwyn Woodward, Huaxia Yao, Rita Adrian, Mathew Allan, Orlane Anneville, Lauri Arvola, Karen Atkins, Leon Boegman, Cayelan Carey, Kyle Christianson, Elvira de Eyto, Curtis DeGasperi, Maria Grechushnikova, Josef Hejzlar, Klaus Joehnk, Ian D. Jones, Alo Laas, Eleanor B. Mackay, Ivan Mammarella, Hampus Markensten, Chris McBride, Deniz Özkundakci, Miguel Potes, Karsten Rinke, Dale Robertson, James A. Rusak, Rui Salgado, Leon van der Linden, Piet Verburg, Danielle Wain, Nicole K. Ward, Sabine Wollrab, and Galina Zdorovennova
Geosci. Model Dev., 15, 4597–4623, https://doi.org/10.5194/gmd-15-4597-2022, https://doi.org/10.5194/gmd-15-4597-2022, 2022
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Lakes and reservoirs are warming across the globe. To better understand how lakes are changing and to project their future behavior amidst various sources of uncertainty, simulations with a range of lake models are required. This in turn requires international coordination across different lake modelling teams worldwide. Here we present a protocol for and results from coordinated simulations of climate change impacts on lakes worldwide.
Anton Rusanen, Kristo Hõrrak, Lauri R. Ahonen, Tuomo Nieminen, Pasi P. Aalto, Pasi Kolari, Markku Kulmala, Tuukka Petäjä, and Heikki Junninen
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2022-67, https://doi.org/10.5194/amt-2022-67, 2022
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We present a framework for setting up SMEAR (Station for Measuring Earth Surface-Atmosphere Relations) type measurement station data flows. This framework, called SMEARcore, consists of modular open-source software components that can be chosen to suit various station configurations. The benefits of using this framework are automation of routine operations, real-time monitoring of measurement results and station status.
Matti Kämäräinen, Anna Lintunen, Markku Kulmala, Juha-Pekka Tuovinen, Ivan Mammarella, Juha Aalto, Henriikka Vekuri, and Annalea Lohila
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-108, https://doi.org/10.5194/bg-2022-108, 2022
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In this work we present an alternative machine learning approach to model the exchange of carbon between the atmosphere and the study site, located in a boreal forest in Southern Finland. The suggested method produces more accurate results than another which has been widely used previously in this context. Accurate estimations of the exchange of carbon are needed for better understanding of the role of forests in regulating atmospheric carbon and climate change.
Meri Räty, Larisa Sogacheva, Helmi-Marja Keskinen, Veli-Matti Kerminen, Tuomo Nieminen, Tuukka Petäjä, Ekaterina Ezhova, and Markku Kulmala
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Preprint under review for ACP
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We utilised back-trajectories to identify the source region of air masses arriving in Hyytiälä, Finland, and their travel time over forests. Combined with atmospheric observations, they revealed how air mass transport over the Fennoscandian boreal forest during the growing season produced an accumulation of cloud condensation nuclei and humidity, promoting cloudiness and precipitation. By 60 hours of transport, air masses appeared to reach a balanced state with the forest environment.
Hanna K. Lappalainen, Tuukka Petäjä, Timo Vihma, Jouni Räisänen, Alexander Baklanov, Sergey Chalov, Igor Esau, Ekaterina Ezhova, Matti Leppäranta, Dmitry Pozdnyakov, Jukka Pumpanen, Meinrat O. Andreae, Mikhail Arshinov, Eija Asmi, Jianhui Bai, Igor Bashmachnikov, Boris Belan, Federico Bianchi, Boris Biskaborn, Michael Boy, Jaana Bäck, Bin Cheng, Natalia Chubarova, Jonathan Duplissy, Egor Dyukarev, Konstantinos Eleftheriadis, Martin Forsius, Martin Heimann, Sirkku Juhola, Vladimir Konovalov, Igor Konovalov, Pavel Konstantinov, Kajar Köster, Elena Lapshina, Anna Lintunen, Alexander Mahura, Risto Makkonen, Svetlana Malkhazova, Ivan Mammarella, Stefano Mammola, Stephany Buenrostro Mazon, Outi Meinander, Eugene Mikhailov, Victoria Miles, Stanislav Myslenkov, Dmitry Orlov, Jean-Daniel Paris, Roberta Pirazzini, Olga Popovicheva, Jouni Pulliainen, Kimmo Rautiainen, Torsten Sachs, Vladimir Shevchenko, Andrey Skorokhod, Andreas Stohl, Elli Suhonen, Erik S. Thomson, Marina Tsidilina, Veli-Pekka Tynkkynen, Petteri Uotila, Aki Virkkula, Nadezhda Voropay, Tobias Wolf, Sayaka Yasunaka, Jiahua Zhang, Yubao Qiu, Aijun Ding, Huadong Guo, Valery Bondur, Nikolay Kasimov, Sergej Zilitinkevich, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys., 22, 4413–4469, https://doi.org/10.5194/acp-22-4413-2022, https://doi.org/10.5194/acp-22-4413-2022, 2022
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We summarize results during the last 5 years in the northern Eurasian region, especially from Russia, and introduce recent observations of the air quality in the urban environments in China. Although the scientific knowledge in these regions has increased, there are still gaps in our understanding of large-scale climate–Earth surface interactions and feedbacks. This arises from limitations in research infrastructures and integrative data analyses, hindering a comprehensive system analysis.
Ville Leinonen, Harri Kokkola, Taina Yli-Juuti, Tero Mielonen, Thomas Kühn, Tuomo Nieminen, Simo Heikkinen, Tuuli Miinalainen, Tommi Bergman, Ken Carslaw, Stefano Decesari, Markus Fiebig, Tareq Hussein, Niku Kivekäs, Markku Kulmala, Ari Leskinen, Andreas Massling, Nikos Mihalopoulos, Jane P. Mulcahy, Steffen M. Noe, Twan van Noije, Fiona M. O'Connor, Colin O'Dowd, Dirk Olivie, Jakob B. Pernov, Tuukka Petäjä, Øyvind Seland, Michael Schulz, Catherine E. Scott, Henrik Skov, Erik Swietlicki, Thomas Tuch, Alfred Wiedensohler, Annele Virtanen, and Santtu Mikkonen
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2022-225, https://doi.org/10.5194/acp-2022-225, 2022
Preprint under review for ACP
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We provide the first extensive comparison of detailed aerosol size distribution trends between in-situ observations from Europe and five different earth system models. We investigated commonly used aerosol modes (nucleation, Aitken, and accumulation) separately and were able to show the differences between measured and modeled trends and especially their seasonal patterns. This provides an important addition to earlier aerosol-cloud interaction model evaluation studies.
Marjan Marbouti, Sehyun Jang, Silvia Becagli, Gabriel Navarro, Rita Traversi, Kitack Lee, Tuomo Nieminen, Lisa J. Beck, Markku Kulmala, Veli-Matti Kerminen, and Mikko Sipilä
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2022-52, https://doi.org/10.5194/acp-2022-52, 2022
Preprint under review for ACP
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This research was done to understand and investigate the roles of Chl-a, PP and sea ice extent in controlling and producing the in-situ measured MSA, SA, HIO3, HOM and aerosol concentrations over the Greenland and Barents Seas. Our results provide strong support to the hypothesis that MSA, SA and small-particle concentrations in the Svalbard area are directly linked to ocean biological activity and sea ice melting during springtime.
Timo Vesala, Kukka-Maaria Kohonen, Linda M. J. Kooijmans, Arnaud P. Praplan, Lenka Foltýnová, Pasi Kolari, Markku Kulmala, Jaana Bäck, David Nelson, Dan Yakir, Mark Zahniser, and Ivan Mammarella
Atmos. Chem. Phys., 22, 2569–2584, https://doi.org/10.5194/acp-22-2569-2022, https://doi.org/10.5194/acp-22-2569-2022, 2022
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Carbonyl sulfide (COS) provides new insights into carbon cycle research. We present an easy-to-use flux parameterization and the longest existing time series of forest–atmosphere COS exchange measurements, which allow us to study both seasonal and interannual variability. We observed only uptake of COS by the forest on an annual basis, with 37 % variability between years. Upscaling the boreal COS uptake using a biosphere model indicates a significant missing COS sink at high latitudes.
Kukka-Maaria Kohonen, Roderick Dewar, Gianluca Tramontana, Aleksanteri Mauranen, Pasi Kolari, Linda M. J. Kooijmans, Dario Papale, Timo Vesala, and Ivan Mammarella
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-32, https://doi.org/10.5194/bg-2022-32, 2022
Preprint under review for BG
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Four different methods for quantifying photosynthesis (GPP) at ecosystem scale were tested, of which two are based on carbon dioxide (CO2) and two on carbonyl sulfide (COS) flux measurements. CO2-based methods are traditional partitioning and a new method using machine learning. We introduce a novel method for calculating GPP from COS fluxes, with potentially better applicability than the former methods. Both COS-based methods gave on average higher GPP estimates than the CO2-based estimates.
Peifeng Su, Jorma Joutsensaari, Lubna Dada, Martha Arbayani Zaidan, Tuomo Nieminen, Xinyang Li, Yusheng Wu, Stefano Decesari, Sasu Tarkoma, Tuukka Petäjä, Markku Kulmala, and Petri Pellikka
Atmos. Chem. Phys., 22, 1293–1309, https://doi.org/10.5194/acp-22-1293-2022, https://doi.org/10.5194/acp-22-1293-2022, 2022
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We regarded the banana shapes in the surface plots as a special kind of object (similar to cats) and applied an instance segmentation technique to automatically identify the new particle formation (NPF) events (especially the strongest ones), in addition to their growth rates, start times, and end times. The automatic method generalized well on datasets collected in different sites, which is useful for long-term data series analysis and obtaining statistical properties of NPF events.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data, 14, 179–208, https://doi.org/10.5194/essd-14-179-2022, https://doi.org/10.5194/essd-14-179-2022, 2022
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The effects of climate warming on carbon cycling across the Arctic–boreal zone (ABZ) remain poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic–boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Jarmo Mäkelä, Laura Arppe, Hannu Fritze, Jussi Heinonsalo, Jari Liski, Markku Oinonen, Petra Straková, and Toni Viskari
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-327, https://doi.org/10.5194/bg-2021-327, 2021
Revised manuscript under review for BG
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Soil carbon sequestration has gained traction as a mean to mitigate rising atmospheric CO2 concentrations. Verification of different methods’ efficiency requires good quality measurements and reliable models. We present a straightforward way to include carbon isotope concentrations into soil decomposition and carbon storages. The modifications considerable improve the model behaviour and enables the use of carbon isotopes as trackers for e.g. soil management practices.
Linda M. J. Kooijmans, Ara Cho, Jin Ma, Aleya Kaushik, Katherine D. Haynes, Ian Baker, Ingrid T. Luijkx, Mathijs Groenink, Wouter Peters, John B. Miller, Joseph A. Berry, Jerome Ogée, Laura K. Meredith, Wu Sun, Kukka-Maaria Kohonen, Timo Vesala, Ivan Mammarella, Huilin Chen, Felix M. Spielmann, Georg Wohlfahrt, Max Berkelhammer, Mary E. Whelan, Kadmiel Maseyk, Ulli Seibt, Roisin Commane, Richard Wehr, and Maarten Krol
Biogeosciences, 18, 6547–6565, https://doi.org/10.5194/bg-18-6547-2021, https://doi.org/10.5194/bg-18-6547-2021, 2021
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The gas carbonyl sulfide (COS) can be used to estimate photosynthesis. To adopt this approach on regional and global scales, we need biosphere models that can simulate COS exchange. So far, such models have not been evaluated against observations. We evaluate the COS biosphere exchange of the SiB4 model against COS flux observations. We find that the model is capable of simulating key processes in COS biosphere exchange. Still, we give recommendations for further improvement of the model.
Auke J. Visser, Laurens N. Ganzeveld, Ignacio Goded, Maarten C. Krol, Ivan Mammarella, Giovanni Manca, and K. Folkert Boersma
Atmos. Chem. Phys., 21, 18393–18411, https://doi.org/10.5194/acp-21-18393-2021, https://doi.org/10.5194/acp-21-18393-2021, 2021
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Dry deposition is an important sink for tropospheric ozone that affects ecosystem carbon uptake, but process understanding remains incomplete. We apply a common deposition representation in atmospheric chemistry models and a multi-layer canopy model to multi-year ozone deposition observations. The multi-layer canopy model performs better on diurnal timescales compared to the common approach, leading to a substantially improved simulation of ozone deposition and vegetation ozone impact metrics.
Moritz Lange, Henri Suominen, Mona Kurppa, Leena Järvi, Emilia Oikarinen, Rafael Savvides, and Kai Puolamäki
Geosci. Model Dev., 14, 7411–7424, https://doi.org/10.5194/gmd-14-7411-2021, https://doi.org/10.5194/gmd-14-7411-2021, 2021
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This study aims to replicate computationally expensive high-resolution large-eddy simulations (LESs) with regression models to simulate urban air quality and pollutant dispersion. The model development, including feature selection, model training and cross-validation, and detection of concept drift, has been described in detail. Of the models applied, log-linear regression shows the best performance. A regression model can replace LES unless high accuracy is needed.
Alex Resovsky, Michel Ramonet, Leonard Rivier, Jerome Tarniewicz, Philippe Ciais, Martin Steinbacher, Ivan Mammarella, Meelis Mölder, Michal Heliasz, Dagmar Kubistin, Matthias Lindauer, Jennifer Müller-Williams, Sebastien Conil, and Richard Engelen
Atmos. Meas. Tech., 14, 6119–6135, https://doi.org/10.5194/amt-14-6119-2021, https://doi.org/10.5194/amt-14-6119-2021, 2021
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We present a technical description of a statistical methodology for extracting synoptic- and seasonal-length anomalies from greenhouse gas time series. The definition of what represents an anomalous signal is somewhat subjective, which we touch on throughout the paper. We show, however, that the method performs reasonably well in extracting portions of time series influenced by significant North Atlantic Oscillation weather episodes and continent-wide terrestrial biospheric aberrations.
Helmi Uusitalo, Jenni Kontkanen, Ilona Ylivinkka, Ekaterina Ezhova, Anastasiia Demakova, Mikhail Arshinov, Boris Denisovich Belan, Denis Davydov, Nan Ma, Tuukka Petäjä, Alfred Wiedensohler, Markku Kulmala, and Tuomo Nieminen
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2021-530, https://doi.org/10.5194/acp-2021-530, 2021
Preprint under review for ACP
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Characteristics of formation of atmospheric aerosol at four boreal forest sites in Finland and Russian Siberia was analyzed. Our results provide information on the governing processes of atmospheric aerosol formation in the boreal forest area, which a substantial part of the continental biosphere. Aerosol formation was occurring less frequently at Siberian than in Finnish sites, which was affected by the lower particle growth rates and higher loss rates in Siberia.
Janne Lampilahti, Hanna E. Manninen, Tuomo Nieminen, Sander Mirme, Mikael Ehn, Iida Pullinen, Katri Leino, Siegfried Schobesberger, Juha Kangasluoma, Jenni Kontkanen, Emma Järvinen, Riikka Väänänen, Taina Yli-Juuti, Radovan Krejci, Katrianne Lehtipalo, Janne Levula, Aadu Mirme, Stefano Decesari, Ralf Tillmann, Douglas R. Worsnop, Franz Rohrer, Astrid Kiendler-Scharr, Tuukka Petäjä, Veli-Matti Kerminen, Thomas F. Mentel, and Markku Kulmala
Atmos. Chem. Phys., 21, 12649–12663, https://doi.org/10.5194/acp-21-12649-2021, https://doi.org/10.5194/acp-21-12649-2021, 2021
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We studied aerosol particle formation and growth in different parts of the planetary boundary layer at two different locations (Po Valley, Italy, and Hyytiälä, Finland). The observations consist of airborne measurements on board an instrumented Zeppelin and a small airplane combined with comprehensive ground-based measurements.
Pavel Alekseychik, Aino Korrensalo, Ivan Mammarella, Samuli Launiainen, Eeva-Stiina Tuittila, Ilkka Korpela, and Timo Vesala
Biogeosciences, 18, 4681–4704, https://doi.org/10.5194/bg-18-4681-2021, https://doi.org/10.5194/bg-18-4681-2021, 2021
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Bogs of northern Eurasia represent a major type of peatland ecosystem and contain vast amounts of carbon, but carbon balance monitoring studies on bogs are scarce. The current project explores 6 years of carbon balance data obtained using the state-of-the-art eddy-covariance technique at a Finnish bog Siikaneva. The results reveal relatively low interannual variability indicative of ecosystem resilience to both cool and hot summers and provide new insights into the seasonal course of C fluxes.
Kyle B. Delwiche, Sara Helen Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Jiquan Chen, Weinan Chen, Housen Chu, Higo J. Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hörtnagl, Hiroki Iwata, Adrien Jacotot, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken W. Krauss, Derrick Y. F. Lai, Annalea Lohila, Ivan Mammarella, Luca Belelli Marchesini, Giovanni Manca, Jaclyn Hatala Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin R. K. Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina V. R. Schäfer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E. Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L. Vourlitis, Eric J. Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, and Robert B. Jackson
Earth Syst. Sci. Data, 13, 3607–3689, https://doi.org/10.5194/essd-13-3607-2021, https://doi.org/10.5194/essd-13-3607-2021, 2021
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Methane is an important greenhouse gas, yet we lack knowledge about its global emissions and drivers. We present FLUXNET-CH4, a new global collection of methane measurements and a critical resource for the research community. We use FLUXNET-CH4 data to quantify the seasonality of methane emissions from freshwater wetlands, finding that methane seasonality varies strongly with latitude. Our new database and analysis will improve wetland model accuracy and inform greenhouse gas budgets.
Toprak Aslan, Olli Peltola, Andreas Ibrom, Eiko Nemitz, Üllar Rannik, and Ivan Mammarella
Atmos. Meas. Tech., 14, 5089–5106, https://doi.org/10.5194/amt-14-5089-2021, https://doi.org/10.5194/amt-14-5089-2021, 2021
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Vertical turbulent fluxes of gases measured by the eddy covariance (EC) technique are subject to high-frequency losses. There are different methods used to describe this low-pass filtering effect and to correct the measured fluxes. In this study, we analysed the systematic uncertainty related to this correction for various attenuation and signal-to-noise ratios. A new and robust transfer function method is finally proposed.
Olli Peltola, Toprak Aslan, Andreas Ibrom, Eiko Nemitz, Üllar Rannik, and Ivan Mammarella
Atmos. Meas. Tech., 14, 5071–5088, https://doi.org/10.5194/amt-14-5071-2021, https://doi.org/10.5194/amt-14-5071-2021, 2021
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Gas fluxes measured by the eddy covariance (EC) technique are subject to filtering due to non-ideal instrumentation. For linear first-order systems this filtering causes also a time lag between vertical wind speed and gas signal which is additional to the gas travel time in the sampling line. The effect of this additional time lag on EC fluxes is ignored in current EC data processing routines. Here we show that this oversight biases EC fluxes and hence propose an approach to rectify this bias.
Anna B. Harper, Karina E. Williams, Patrick C. McGuire, Maria Carolina Duran Rojas, Debbie Hemming, Anne Verhoef, Chris Huntingford, Lucy Rowland, Toby Marthews, Cleiton Breder Eller, Camilla Mathison, Rodolfo L. B. Nobrega, Nicola Gedney, Pier Luigi Vidale, Fred Otu-Larbi, Divya Pandey, Sebastien Garrigues, Azin Wright, Darren Slevin, Martin G. De Kauwe, Eleanor Blyth, Jonas Ardö, Andrew Black, Damien Bonal, Nina Buchmann, Benoit Burban, Kathrin Fuchs, Agnès de Grandcourt, Ivan Mammarella, Lutz Merbold, Leonardo Montagnani, Yann Nouvellon, Natalia Restrepo-Coupe, and Georg Wohlfahrt
Geosci. Model Dev., 14, 3269–3294, https://doi.org/10.5194/gmd-14-3269-2021, https://doi.org/10.5194/gmd-14-3269-2021, 2021
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We evaluated 10 representations of soil moisture stress in the JULES land surface model against site observations of GPP and latent heat flux. Increasing the soil depth and plant access to deep soil moisture improved many aspects of the simulations, and we recommend these settings in future work using JULES. In addition, using soil matric potential presents the opportunity to include parameters specific to plant functional type to further improve modeled fluxes.
Thomas Thorp, Stephen R. Arnold, Richard J. Pope, Dominick V. Spracklen, Luke Conibear, Christoph Knote, Mikhail Arshinov, Boris Belan, Eija Asmi, Tuomas Laurila, Andrei I. Skorokhod, Tuomo Nieminen, and Tuukka Petäjä
Atmos. Chem. Phys., 21, 4677–4697, https://doi.org/10.5194/acp-21-4677-2021, https://doi.org/10.5194/acp-21-4677-2021, 2021
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We compare modelled near-surface pollutants with surface and satellite observations to better understand the controls on the regional concentrations of pollution in western Siberia for late spring and summer in 2011. We find two commonly used emission inventories underestimate human emissions when compared to observations. Transport emissions are the main source of pollutants within the region during this period, whilst fire emissions peak during June and are only significant south of 60° N.
Tamara Emmerichs, Astrid Kerkweg, Huug Ouwersloot, Silvano Fares, Ivan Mammarella, and Domenico Taraborrelli
Geosci. Model Dev., 14, 495–519, https://doi.org/10.5194/gmd-14-495-2021, https://doi.org/10.5194/gmd-14-495-2021, 2021
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Dry deposition to vegetation is a major sink of ground-level ozone. Its parameterization in atmospheric chemistry models represents a significant source of uncertainty for global tropospheric ozone. We extended the current model parameterization with a relevant pathway and important meteorological adjustment factors. The comparison with measurements shows that this enables a more realistic model representation of ozone dry deposition velocity. Globally, annual dry deposition loss increases.
Camille Yver-Kwok, Carole Philippon, Peter Bergamaschi, Tobias Biermann, Francescopiero Calzolari, Huilin Chen, Sebastien Conil, Paolo Cristofanelli, Marc Delmotte, Juha Hatakka, Michal Heliasz, Ove Hermansen, Kateřina Komínková, Dagmar Kubistin, Nicolas Kumps, Olivier Laurent, Tuomas Laurila, Irene Lehner, Janne Levula, Matthias Lindauer, Morgan Lopez, Ivan Mammarella, Giovanni Manca, Per Marklund, Jean-Marc Metzger, Meelis Mölder, Stephen M. Platt, Michel Ramonet, Leonard Rivier, Bert Scheeren, Mahesh Kumar Sha, Paul Smith, Martin Steinbacher, Gabriela Vítková, and Simon Wyss
Atmos. Meas. Tech., 14, 89–116, https://doi.org/10.5194/amt-14-89-2021, https://doi.org/10.5194/amt-14-89-2021, 2021
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The Integrated Carbon Observation System (ICOS) is a pan-European research infrastructure which provides harmonized and high-precision scientific data on the carbon cycle and the greenhouse gas (GHG) budget. All stations have to undergo a rigorous assessment before being labeled, i.e., receiving approval to join the network. In this paper, we present the labeling process for the ICOS atmospheric network through the 23 stations that were labeled between November 2017 and November 2019.
Helmi-Marja Keskinen, Ilona Ylivinkka, Liine Heikkinen, Pasi P. Aalto, Tuomo Nieminen, Katrianne Lehtipalo, Juho Aalto, Janne Levula, Jutta Kesti, Lauri R. Ahonen, Ekaterina Ezhova, Markku Kulmala, and Tuukka Petäjä
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2020-447, https://doi.org/10.5194/amt-2020-447, 2020
Publication in AMT not foreseen
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Long-term (2005–2017) aerosol particulate matter (PM) concentration measurements at Finland at Station for Measuring Ecosystem-Atmosphere Relations (SMEAR II, Hyytiälä) have been measured with three different measurement equipment. The comparison revealed an equivalence among the three methods. Mass concentrations were generally highest in summer. The descending trend was visible here in spring, summer and winter. This might have resulted at least partly from air quality legislation.
Toni Viskari, Maisa Laine, Liisa Kulmala, Jarmo Mäkelä, Istem Fer, and Jari Liski
Geosci. Model Dev., 13, 5959–5971, https://doi.org/10.5194/gmd-13-5959-2020, https://doi.org/10.5194/gmd-13-5959-2020, 2020
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The research here established whether a Bayesian statistical method called state data assimilation could be used to improve soil organic carbon (SOC) forecasts. Our test case was a fallow experiment where SOC content was measured over several decades from a plot where all vegetation was removed. Our results showed that state data assimilation improved projections and allowed for the detailed model state be updated with coarse total carbon measurements.
Yuan Zhang, Ana Bastos, Fabienne Maignan, Daniel Goll, Olivier Boucher, Laurent Li, Alessandro Cescatti, Nicolas Vuichard, Xiuzhi Chen, Christof Ammann, M. Altaf Arain, T. Andrew Black, Bogdan Chojnicki, Tomomichi Kato, Ivan Mammarella, Leonardo Montagnani, Olivier Roupsard, Maria J. Sanz, Lukas Siebicke, Marek Urbaniak, Francesco Primo Vaccari, Georg Wohlfahrt, Will Woodgate, and Philippe Ciais
Geosci. Model Dev., 13, 5401–5423, https://doi.org/10.5194/gmd-13-5401-2020, https://doi.org/10.5194/gmd-13-5401-2020, 2020
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We improved the ORCHIDEE LSM by distinguishing diffuse and direct light in canopy and evaluated the new model with observations from 159 sites. Compared with the old model, the new model has better sunny GPP and reproduced the diffuse light fertilization effect observed at flux sites. Our simulations also indicate different mechanisms causing the observed GPP enhancement under cloudy conditions at different times. The new model has the potential to study large-scale impacts of aerosol changes.
Janne Lampilahti, Hanna Elina Manninen, Katri Leino, Riikka Väänänen, Antti Manninen, Stephany Buenrostro Mazon, Tuomo Nieminen, Matti Leskinen, Joonas Enroth, Marja Bister, Sergej Zilitinkevich, Juha Kangasluoma, Heikki Järvinen, Veli-Matti Kerminen, Tuukka Petäjä, and Markku Kulmala
Atmos. Chem. Phys., 20, 11841–11854, https://doi.org/10.5194/acp-20-11841-2020, https://doi.org/10.5194/acp-20-11841-2020, 2020
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In this work, by using co-located airborne and ground-based measurements, we show that counter-rotating horizontal circulations in the planetary boundary layer (roll vortices) frequently enhance regional new particle formation or induce localized bursts of new particle formation. These observations can be explained by the ability of the rolls to efficiently lift low-volatile vapors emitted from the surface to the top of the boundary layer where new particle formation is more favorable.
Martin Heinritzi, Lubna Dada, Mario Simon, Dominik Stolzenburg, Andrea C. Wagner, Lukas Fischer, Lauri R. Ahonen, Stavros Amanatidis, Rima Baalbaki, Andrea Baccarini, Paulus S. Bauer, Bernhard Baumgartner, Federico Bianchi, Sophia Brilke, Dexian Chen, Randall Chiu, Antonio Dias, Josef Dommen, Jonathan Duplissy, Henning Finkenzeller, Carla Frege, Claudia Fuchs, Olga Garmash, Hamish Gordon, Manuel Granzin, Imad El Haddad, Xucheng He, Johanna Helm, Victoria Hofbauer, Christopher R. Hoyle, Juha Kangasluoma, Timo Keber, Changhyuk Kim, Andreas Kürten, Houssni Lamkaddam, Tiia M. Laurila, Janne Lampilahti, Chuan Ping Lee, Katrianne Lehtipalo, Markus Leiminger, Huajun Mai, Vladimir Makhmutov, Hanna Elina Manninen, Ruby Marten, Serge Mathot, Roy Lee Mauldin, Bernhard Mentler, Ugo Molteni, Tatjana Müller, Wei Nie, Tuomo Nieminen, Antti Onnela, Eva Partoll, Monica Passananti, Tuukka Petäjä, Joschka Pfeifer, Veronika Pospisilova, Lauriane L. J. Quéléver, Matti P. Rissanen, Clémence Rose, Siegfried Schobesberger, Wiebke Scholz, Kay Scholze, Mikko Sipilä, Gerhard Steiner, Yuri Stozhkov, Christian Tauber, Yee Jun Tham, Miguel Vazquez-Pufleau, Annele Virtanen, Alexander L. Vogel, Rainer Volkamer, Robert Wagner, Mingyi Wang, Lena Weitz, Daniela Wimmer, Mao Xiao, Chao Yan, Penglin Ye, Qiaozhi Zha, Xueqin Zhou, Antonio Amorim, Urs Baltensperger, Armin Hansel, Markku Kulmala, António Tomé, Paul M. Winkler, Douglas R. Worsnop, Neil M. Donahue, Jasper Kirkby, and Joachim Curtius
Atmos. Chem. Phys., 20, 11809–11821, https://doi.org/10.5194/acp-20-11809-2020, https://doi.org/10.5194/acp-20-11809-2020, 2020
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With experiments performed at CLOUD, we show how isoprene interferes in monoterpene oxidation via RO2 termination at atmospherically relevant concentrations. This interference shifts the distribution of highly oxygenated organic molecules (HOMs) away from C20 class dimers towards C15 class dimers, which subsequently reduces both biogenic nucleation and early growth rates. Our results may help to understand the absence of new-particle formation in isoprene-rich environments.
Lubna Dada, Ilona Ylivinkka, Rima Baalbaki, Chang Li, Yishuo Guo, Chao Yan, Lei Yao, Nina Sarnela, Tuija Jokinen, Kaspar R. Daellenbach, Rujing Yin, Chenjuan Deng, Biwu Chu, Tuomo Nieminen, Yonghong Wang, Zhuohui Lin, Roseline C. Thakur, Jenni Kontkanen, Dominik Stolzenburg, Mikko Sipilä, Tareq Hussein, Pauli Paasonen, Federico Bianchi, Imre Salma, Tamás Weidinger, Michael Pikridas, Jean Sciare, Jingkun Jiang, Yongchun Liu, Tuukka Petäjä, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys., 20, 11747–11766, https://doi.org/10.5194/acp-20-11747-2020, https://doi.org/10.5194/acp-20-11747-2020, 2020
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We rely on sulfuric acid measurements in four contrasting environments, Hyytiälä, Finland; Agia Marina, Cyprus; Budapest, Hungary; and Beijing, China, representing semi-pristine boreal forest, rural environment in the Mediterranean area, urban environment, and heavily polluted megacity, respectively, in order to define the sources and sinks of sulfuric acid in these environments and to derive a new sulfuric acid proxy to be utilized in locations and during periods when it is not measured.
Kukka-Maaria Kohonen, Pasi Kolari, Linda M. J. Kooijmans, Huilin Chen, Ulli Seibt, Wu Sun, and Ivan Mammarella
Atmos. Meas. Tech., 13, 3957–3975, https://doi.org/10.5194/amt-13-3957-2020, https://doi.org/10.5194/amt-13-3957-2020, 2020
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Biosphere–atmosphere gas exchange (flux) measurements of carbonyl sulfide (COS) are becoming popular for estimating biospheric photosynthesis. To compare COS flux measurements across different measurement sites, we need standardized protocols for data processing. We analyze how various data processing steps affect the calculated COS flux and how they differ from carbon dioxide (CO2) flux processing steps, and we aim to settle on a set of recommended protocols for COS flux calculation.
Xuefei Li, Outi Wahlroos, Sami Haapanala, Jukka Pumpanen, Harri Vasander, Anne Ojala, Timo Vesala, and Ivan Mammarella
Biogeosciences, 17, 3409–3425, https://doi.org/10.5194/bg-17-3409-2020, https://doi.org/10.5194/bg-17-3409-2020, 2020
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We measured CO2 and CH4 fluxes and quantified the global warming potential of different surface areas in a recently created urban wetland in Southern Finland. The ecosystem has a small net climate warming effect which was mainly contributed by the open-water areas. Our results suggest that limiting open-water areas and setting a design preference for areas of emergent vegetation in the establishment of urban wetlands can be a beneficial practice when considering solely the climate impact.
Dominik Stolzenburg, Mario Simon, Ananth Ranjithkumar, Andreas Kürten, Katrianne Lehtipalo, Hamish Gordon, Sebastian Ehrhart, Henning Finkenzeller, Lukas Pichelstorfer, Tuomo Nieminen, Xu-Cheng He, Sophia Brilke, Mao Xiao, António Amorim, Rima Baalbaki, Andrea Baccarini, Lisa Beck, Steffen Bräkling, Lucía Caudillo Murillo, Dexian Chen, Biwu Chu, Lubna Dada, António Dias, Josef Dommen, Jonathan Duplissy, Imad El Haddad, Lukas Fischer, Loic Gonzalez Carracedo, Martin Heinritzi, Changhyuk Kim, Theodore K. Koenig, Weimeng Kong, Houssni Lamkaddam, Chuan Ping Lee, Markus Leiminger, Zijun Li, Vladimir Makhmutov, Hanna E. Manninen, Guillaume Marie, Ruby Marten, Tatjana Müller, Wei Nie, Eva Partoll, Tuukka Petäjä, Joschka Pfeifer, Maxim Philippov, Matti P. Rissanen, Birte Rörup, Siegfried Schobesberger, Simone Schuchmann, Jiali Shen, Mikko Sipilä, Gerhard Steiner, Yuri Stozhkov, Christian Tauber, Yee Jun Tham, António Tomé, Miguel Vazquez-Pufleau, Andrea C. Wagner, Mingyi Wang, Yonghong Wang, Stefan K. Weber, Daniela Wimmer, Peter J. Wlasits, Yusheng Wu, Qing Ye, Marcel Zauner-Wieczorek, Urs Baltensperger, Kenneth S. Carslaw, Joachim Curtius, Neil M. Donahue, Richard C. Flagan, Armin Hansel, Markku Kulmala, Jos Lelieveld, Rainer Volkamer, Jasper Kirkby, and Paul M. Winkler
Atmos. Chem. Phys., 20, 7359–7372, https://doi.org/10.5194/acp-20-7359-2020, https://doi.org/10.5194/acp-20-7359-2020, 2020
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Sulfuric acid is a major atmospheric vapour for aerosol formation. If new particles grow fast enough, they can act as cloud droplet seeds or affect air quality. In a controlled laboratory set-up, we demonstrate that van der Waals forces enhance growth from sulfuric acid. We disentangle the effects of ammonia, ions and particle hydration, presenting a complete picture of sulfuric acid growth from molecular clusters onwards. In a climate model, we show its influence on the global aerosol budget.
Christopher P. O. Reyer, Ramiro Silveyra Gonzalez, Klara Dolos, Florian Hartig, Ylva Hauf, Matthias Noack, Petra Lasch-Born, Thomas Rötzer, Hans Pretzsch, Henning Meesenburg, Stefan Fleck, Markus Wagner, Andreas Bolte, Tanja G. M. Sanders, Pasi Kolari, Annikki Mäkelä, Timo Vesala, Ivan Mammarella, Jukka Pumpanen, Alessio Collalti, Carlo Trotta, Giorgio Matteucci, Ettore D'Andrea, Lenka Foltýnová, Jan Krejza, Andreas Ibrom, Kim Pilegaard, Denis Loustau, Jean-Marc Bonnefond, Paul Berbigier, Delphine Picart, Sébastien Lafont, Michael Dietze, David Cameron, Massimo Vieno, Hanqin Tian, Alicia Palacios-Orueta, Victor Cicuendez, Laura Recuero, Klaus Wiese, Matthias Büchner, Stefan Lange, Jan Volkholz, Hyungjun Kim, Joanna A. Horemans, Friedrich Bohn, Jörg Steinkamp, Alexander Chikalanov, Graham P. Weedon, Justin Sheffield, Flurin Babst, Iliusi Vega del Valle, Felicitas Suckow, Simon Martel, Mats Mahnken, Martin Gutsch, and Katja Frieler
Earth Syst. Sci. Data, 12, 1295–1320, https://doi.org/10.5194/essd-12-1295-2020, https://doi.org/10.5194/essd-12-1295-2020, 2020
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Process-based vegetation models are widely used to predict local and global ecosystem dynamics and climate change impacts. Due to their complexity, they require careful parameterization and evaluation to ensure that projections are accurate and reliable. The PROFOUND Database provides a wide range of empirical data to calibrate and evaluate vegetation models that simulate climate impacts at the forest stand scale to support systematic model intercomparisons and model development in Europe.
Jarmo Mäkelä, Francesco Minunno, Tuula Aalto, Annikki Mäkelä, Tiina Markkanen, and Mikko Peltoniemi
Biogeosciences, 17, 2681–2700, https://doi.org/10.5194/bg-17-2681-2020, https://doi.org/10.5194/bg-17-2681-2020, 2020
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We assess the relative magnitude of uncertainty sources on ecosystem indicators of the 21st century climate change on two boreal forest sites. In addition to RCP and climate model uncertainties, we included the overlooked model parameter uncertainty and management actions in our analysis. Management was the dominant uncertainty factor for the more verdant southern site, followed by RCP, climate and parameter uncertainties. The uncertainties were estimated with canonical correlation analysis.
Dean Chen, Putian Zhou, Tuomo Nieminen, Pontus Roldin, Ximeng Qi, Petri Clusius, Carlton Xavier, Lukas Pichelstorfer, Markku Kulmala, Pekka Rantala, Juho Aalto, Nina Sarnela, Pasi Kolari, Petri Keronen, Matti P. Rissanen, Metin Baykara, and Michael Boy
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2020-128, https://doi.org/10.5194/acp-2020-128, 2020
Preprint withdrawn
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Atmospheric oxidants OH, O3 and NO3 dominate the atmospheric oxidation capacity, and sulfuric acid (H2SO4) is considered as a main driver for new particle formation events. We studied how the trends of these atmospheric oxidants and H2SO4 changed in southern Finland during the past 12 years and discussed how these trends related to decreasing emissions of air pollutants in Europe. Our results showed that OH increased by 1.56 % yr−1 at daytime and NO3 decreased by 3.92 % yr−1 at nighttime.
Santtu Mikkonen, Mikko R. A. Pitkänen, Tuomo Nieminen, Antti Lipponen, Sini Isokääntä, Antti Arola, and Kari E. J. Lehtinen
Atmos. Chem. Phys., 19, 12531–12543, https://doi.org/10.5194/acp-19-12531-2019, https://doi.org/10.5194/acp-19-12531-2019, 2019
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Atmospheric measurement data never come without measurement error. Too often, these errors are neglected when researchers make inferences from their data. We applied multiple line-fitting methods to simulated data mimicking two central variables in aerosol research. Our results show that an ordinary least squares fit, typically used to describe relationships, underestimates the slope of the fit and that methods taking the measurement uncertainty into account performed significantly better.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Jarmo Mäkelä, Jürgen Knauer, Mika Aurela, Andrew Black, Martin Heimann, Hideki Kobayashi, Annalea Lohila, Ivan Mammarella, Hank Margolis, Tiina Markkanen, Jouni Susiluoto, Tea Thum, Toni Viskari, Sönke Zaehle, and Tuula Aalto
Geosci. Model Dev., 12, 4075–4098, https://doi.org/10.5194/gmd-12-4075-2019, https://doi.org/10.5194/gmd-12-4075-2019, 2019
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We assess the differences of six stomatal conductance formulations, embedded into a land–vegetation model JSBACH, on 10 boreal coniferous evergreen forest sites. We calibrate the model parameters using all six functions in a multi-year experiment, as well as for a separate drought event at one of the sites, using the adaptive population importance sampler. The analysis reveals weaknesses in the stomatal conductance formulation-dependent model behaviour that we are able to partially amend.
Petri Kiuru, Anne Ojala, Ivan Mammarella, Jouni Heiskanen, Kukka-Maaria Erkkilä, Heli Miettinen, Timo Vesala, and Timo Huttula
Biogeosciences, 16, 3297–3317, https://doi.org/10.5194/bg-16-3297-2019, https://doi.org/10.5194/bg-16-3297-2019, 2019
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Many boreal lakes emit the greenhouse gas carbon dioxide (CO2) to the atmosphere. We incorporated four different gas exchange models into a physico-biochemical lake model and studied their ability to simulate lake air–water CO2 fluxes. The inclusion of refined gas exchange models in lake models that simulate carbon cycling is important to assess lake carbon budgets. However, higher estimates for inorganic carbon sources in boreal lakes are needed to balance the CO2 losses to the atmosphere.
Olli Peltola, Timo Vesala, Yao Gao, Olle Räty, Pavel Alekseychik, Mika Aurela, Bogdan Chojnicki, Ankur R. Desai, Albertus J. Dolman, Eugenie S. Euskirchen, Thomas Friborg, Mathias Göckede, Manuel Helbig, Elyn Humphreys, Robert B. Jackson, Georg Jocher, Fortunat Joos, Janina Klatt, Sara H. Knox, Natalia Kowalska, Lars Kutzbach, Sebastian Lienert, Annalea Lohila, Ivan Mammarella, Daniel F. Nadeau, Mats B. Nilsson, Walter C. Oechel, Matthias Peichl, Thomas Pypker, William Quinton, Janne Rinne, Torsten Sachs, Mateusz Samson, Hans Peter Schmid, Oliver Sonnentag, Christian Wille, Donatella Zona, and Tuula Aalto
Earth Syst. Sci. Data, 11, 1263–1289, https://doi.org/10.5194/essd-11-1263-2019, https://doi.org/10.5194/essd-11-1263-2019, 2019
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Here we develop a monthly gridded dataset of northern (> 45 N) wetland methane (CH4) emissions. The data product is derived using a random forest machine-learning technique and eddy covariance CH4 fluxes from 25 wetland sites. Annual CH4 emissions from these wetlands calculated from the derived data product are comparable to prior studies focusing on these areas. This product is an independent estimate of northern wetland CH4 emissions and hence could be used, e.g. for process model evaluation.
Elisa Männistö, Aino Korrensalo, Pavel Alekseychik, Ivan Mammarella, Olli Peltola, Timo Vesala, and Eeva-Stiina Tuittila
Biogeosciences, 16, 2409–2421, https://doi.org/10.5194/bg-16-2409-2019, https://doi.org/10.5194/bg-16-2409-2019, 2019
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We studied methane emitted as episodic bubble release (ebullition) from water and bare peat surfaces of a boreal bog over three years. There was more ebullition from water than from bare peat surfaces, and it was controlled by peat temperature, water level, atmospheric pressure and the weekly temperature sum. However, the contribution of methane bubbles to the total ecosystem methane emission was small. This new information can be used to improve process models of peatland methane dynamics.
Ekaterina Ezhova, Ilona Ylivinkka, Joel Kuusk, Kaupo Komsaare, Marko Vana, Alisa Krasnova, Steffen Noe, Mikhail Arshinov, Boris Belan, Sung-Bin Park, Jošt Valentin Lavrič, Martin Heimann, Tuukka Petäjä, Timo Vesala, Ivan Mammarella, Pasi Kolari, Jaana Bäck, Üllar Rannik, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys., 18, 17863–17881, https://doi.org/10.5194/acp-18-17863-2018, https://doi.org/10.5194/acp-18-17863-2018, 2018
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Understanding the connections between aerosols, solar radiation and photosynthesis in terrestrial ecosystems is important for estimates of the CO2 balance in the atmosphere. Atmospheric aerosols and clouds influence solar radiation. In this study, we quantify the aerosol effect on solar radiation in boreal forests and study forest ecosystems response to this change in the radiation conditions. The analysis is based on atmospheric observations from several remote stations in Eurasian forests.
Qiaozhi Zha, Chao Yan, Heikki Junninen, Matthieu Riva, Nina Sarnela, Juho Aalto, Lauriane Quéléver, Simon Schallhart, Lubna Dada, Liine Heikkinen, Otso Peräkylä, Jun Zou, Clémence Rose, Yonghong Wang, Ivan Mammarella, Gabriel Katul, Timo Vesala, Douglas R. Worsnop, Markku Kulmala, Tuukka Petäjä, Federico Bianchi, and Mikael Ehn
Atmos. Chem. Phys., 18, 17437–17450, https://doi.org/10.5194/acp-18-17437-2018, https://doi.org/10.5194/acp-18-17437-2018, 2018
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Vertical measurements of highly oxygenated molecules (HOMs) below and above the forest canopy were performed for the first time in a boreal forest during September 2016. Our results highlight that near-ground HOM measurements may only be representative of a small fraction of the entire nocturnal boundary layer, which may sequentially influence the growth of newly formed particles and SOA formation close to ground surface, where the majority of measurements are conducted.
Sebastian Ehrhart, Eimear M. Dunne, Hanna E. Manninen, Tuomo Nieminen, Jos Lelieveld, and Andrea Pozzer
Geosci. Model Dev., 11, 4987–5001, https://doi.org/10.5194/gmd-11-4987-2018, https://doi.org/10.5194/gmd-11-4987-2018, 2018
Tuomo Nieminen, Veli-Matti Kerminen, Tuukka Petäjä, Pasi P. Aalto, Mikhail Arshinov, Eija Asmi, Urs Baltensperger, David C. S. Beddows, Johan Paul Beukes, Don Collins, Aijun Ding, Roy M. Harrison, Bas Henzing, Rakesh Hooda, Min Hu, Urmas Hõrrak, Niku Kivekäs, Kaupo Komsaare, Radovan Krejci, Adam Kristensson, Lauri Laakso, Ari Laaksonen, W. Richard Leaitch, Heikki Lihavainen, Nikolaos Mihalopoulos, Zoltán Németh, Wei Nie, Colin O'Dowd, Imre Salma, Karine Sellegri, Birgitta Svenningsson, Erik Swietlicki, Peter Tunved, Vidmantas Ulevicius, Ville Vakkari, Marko Vana, Alfred Wiedensohler, Zhijun Wu, Annele Virtanen, and Markku Kulmala
Atmos. Chem. Phys., 18, 14737–14756, https://doi.org/10.5194/acp-18-14737-2018, https://doi.org/10.5194/acp-18-14737-2018, 2018
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Atmospheric aerosols have diverse effects on air quality, human health, and global climate. One important source of aerosols is their formation via nucleation and growth in the atmosphere. We have analyzed long-term observations of regional new particle formation events around the globe and provide a comprehensive view on the characteristics of this phenomenon in diverse environments. The results are useful in developing more realistic representation of atmospheric aerosols in global models.
Pertti Hari, Steffen Noe, Sigrid Dengel, Jan Elbers, Bert Gielen, Veli-Matti Kerminen, Bart Kruijt, Liisa Kulmala, Anders Lindroth, Ivan Mammarella, Tuukka Petäjä, Guy Schurgers, Anni Vanhatalo, Markku Kulmala, and Jaana Bäck
Atmos. Chem. Phys., 18, 13321–13328, https://doi.org/10.5194/acp-18-13321-2018, https://doi.org/10.5194/acp-18-13321-2018, 2018
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The development of eddy-covariance measurements of ecosystem CO2 fluxes began a new era in the field studies of photosynthesis. The interpretation of the very variable CO2 fluxes in evergreen forests has been problematic especially in seasonal transition times. We apply two theoretical needle-level equations and show they can predict photosynthetic CO2 flux between the atmosphere and Scots pine forests. This has strong implications for the interpretation of the global change and boreal forests.
Daniela Wimmer, Stephany Buenrostro Mazon, Hanna Elina Manninen, Juha Kangasluoma, Alessandro Franchin, Tuomo Nieminen, John Backman, Jian Wang, Chongai Kuang, Radovan Krejci, Joel Brito, Fernando Goncalves Morais, Scot Turnbull Martin, Paulo Artaxo, Markku Kulmala, Veli-Matti Kerminen, and Tuukka Petäjä
Atmos. Chem. Phys., 18, 13245–13264, https://doi.org/10.5194/acp-18-13245-2018, https://doi.org/10.5194/acp-18-13245-2018, 2018
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This work focuses on understanding the production of very small airborne particles in the undisturbed environment of the Amazon basin. Computer models have shown that up to 70 % of these tiny particles are responsible for cloud formation on a global scale. The processes behind the production of these very small particles have been studied intensely recently. Their appearance has been observed almost all over the world. We directly measure sub-3 nm aerosols for the first time in the Amazon basin.
Jason A. Ducker, Christopher D. Holmes, Trevor F. Keenan, Silvano Fares, Allen H. Goldstein, Ivan Mammarella, J. William Munger, and Jordan Schnell
Biogeosciences, 15, 5395–5413, https://doi.org/10.5194/bg-15-5395-2018, https://doi.org/10.5194/bg-15-5395-2018, 2018
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We have developed an accurate method (SynFlux) to estimate ozone deposition and stomatal uptake across 103 flux tower sites (43 US, 60 Europe), where ozone concentrations and fluxes have not been measured. In all, the SynFlux public dataset provides monthly values of ozone dry deposition for 926 site years across a wide array of ecosystems. The SynFlux dataset will promote further applications to ecosystem, air quality, or climate modeling across the geoscience community.
Jorma Joutsensaari, Matthew Ozon, Tuomo Nieminen, Santtu Mikkonen, Timo Lähivaara, Stefano Decesari, M. Cristina Facchini, Ari Laaksonen, and Kari E. J. Lehtinen
Atmos. Chem. Phys., 18, 9597–9615, https://doi.org/10.5194/acp-18-9597-2018, https://doi.org/10.5194/acp-18-9597-2018, 2018
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New particle formation (NPF) in the atmosphere is globally an important source of aerosol particles. NPF events are typically identified and analyzed manually by researchers from particle size distribution data day by day, which is time consuming and might be inconsistent. We have developed an automatic analysis method based on deep learning for NPF event identification. The developed method can be easily utilized to analyze any long-term datasets more accurately and consistently.
Mary E. Whelan, Sinikka T. Lennartz, Teresa E. Gimeno, Richard Wehr, Georg Wohlfahrt, Yuting Wang, Linda M. J. Kooijmans, Timothy W. Hilton, Sauveur Belviso, Philippe Peylin, Róisín Commane, Wu Sun, Huilin Chen, Le Kuai, Ivan Mammarella, Kadmiel Maseyk, Max Berkelhammer, King-Fai Li, Dan Yakir, Andrew Zumkehr, Yoko Katayama, Jérôme Ogée, Felix M. Spielmann, Florian Kitz, Bharat Rastogi, Jürgen Kesselmeier, Julia Marshall, Kukka-Maaria Erkkilä, Lisa Wingate, Laura K. Meredith, Wei He, Rüdiger Bunk, Thomas Launois, Timo Vesala, Johan A. Schmidt, Cédric G. Fichot, Ulli Seibt, Scott Saleska, Eric S. Saltzman, Stephen A. Montzka, Joseph A. Berry, and J. Elliott Campbell
Biogeosciences, 15, 3625–3657, https://doi.org/10.5194/bg-15-3625-2018, https://doi.org/10.5194/bg-15-3625-2018, 2018
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Measurements of the trace gas carbonyl sulfide (OCS) are helpful in quantifying photosynthesis at previously unknowable temporal and spatial scales. While CO2 is both consumed and produced within ecosystems, OCS is mostly produced in the oceans or from specific industries, and destroyed in plant leaves in proportion to CO2. This review summarizes the advancements we have made in the understanding of OCS exchange and applications to vital ecosystem water and carbon cycle questions.
Maria Provenzale, Anne Ojala, Jouni Heiskanen, Kukka-Maaria Erkkilä, Ivan Mammarella, Pertti Hari, and Timo Vesala
Biogeosciences, 15, 2021–2032, https://doi.org/10.5194/bg-15-2021-2018, https://doi.org/10.5194/bg-15-2021-2018, 2018
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We extensively tested and refined a direct, high-frequency free-water CO2 measurement method to study the lake net ecosystem productivity. The method was first proposed in 2008, but neglected ever since.
With high-frequency direct methods, we can calculate the lake productivity more precisely, and parameterise its dependency on environmental variables. This helps us expand our knowledge on the carbon cycle in the water, and leads to a better integration of water bodies in carbon budgets.
Jouni Susiluoto, Maarit Raivonen, Leif Backman, Marko Laine, Jarmo Makela, Olli Peltola, Timo Vesala, and Tuula Aalto
Geosci. Model Dev., 11, 1199–1228, https://doi.org/10.5194/gmd-11-1199-2018, https://doi.org/10.5194/gmd-11-1199-2018, 2018
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Methane is an important greenhouse gas and methane emissions from wetlands contribute to the warming of the climate. Wetland methane emissions are also challenging to estimate. We analyze the performance of a new wetland emission computer model utilizing mathematical methods and using data from a wetland in southern Finland. The analysis helps to explain how wetlands produce methane and how emission modeling can be improved and uncertainties in the emission estimates reduced in future studies.
Aino Korrensalo, Elisa Männistö, Pavel Alekseychik, Ivan Mammarella, Janne Rinne, Timo Vesala, and Eeva-Stiina Tuittila
Biogeosciences, 15, 1749–1761, https://doi.org/10.5194/bg-15-1749-2018, https://doi.org/10.5194/bg-15-1749-2018, 2018
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We measured methane fluxes of a boreal bog from six different plant community types in 2012–2014. We found only little variation in methane fluxes among plant community types. Peat temperature as well as both leaf area of plant species with air channels and of all vegetation are important factors controlling the fluxes. We also detected negative net fluxes indicating methane consumption each year. Our results can be used to improve the models of peatland methane dynamics under climate change.
Nina Sarnela, Tuija Jokinen, Jonathan Duplissy, Chao Yan, Tuomo Nieminen, Mikael Ehn, Siegfried Schobesberger, Martin Heinritzi, Sebastian Ehrhart, Katrianne Lehtipalo, Jasmin Tröstl, Mario Simon, Andreas Kürten, Markus Leiminger, Michael J. Lawler, Matti P. Rissanen, Federico Bianchi, Arnaud P. Praplan, Jani Hakala, Antonio Amorim, Marc Gonin, Armin Hansel, Jasper Kirkby, Josef Dommen, Joachim Curtius, James N. Smith, Tuukka Petäjä, Douglas R. Worsnop, Markku Kulmala, Neil M. Donahue, and Mikko Sipilä
Atmos. Chem. Phys., 18, 2363–2380, https://doi.org/10.5194/acp-18-2363-2018, https://doi.org/10.5194/acp-18-2363-2018, 2018
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Atmospheric trace gases can form small molecular clusters, which can grow to larger sizes through the condensation of vapours. This process is called new particle formation. In this paper we studied the formation of sulfuric acid and highly oxygenated molecules, the key compounds in atmospheric new particle formation, in chamber experiments and introduced a way to simulate these ozonolysis products of α-pinene in a simple manner.
Johannes Größ, Amar Hamed, André Sonntag, Gerald Spindler, Hanna Elina Manninen, Tuomo Nieminen, Markku Kulmala, Urmas Hõrrak, Christian Plass-Dülmer, Alfred Wiedensohler, and Wolfram Birmili
Atmos. Chem. Phys., 18, 1835–1861, https://doi.org/10.5194/acp-18-1835-2018, https://doi.org/10.5194/acp-18-1835-2018, 2018
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This paper revisits the atmospheric new particle formation (NPF) process in the polluted troposphere. Novel aspects include a new NPF classification, which aims at more objectivity, and a long-term analysis of neutral cluster and air ion spectrometer data. Intense NPF events were associated with enhanced sulfur dioxide concentrations and solar radiation, while no significant relationships were observed with the condensation sink, surface-measured turbulence parameters, or ammonia.
Chunjing Qiu, Dan Zhu, Philippe Ciais, Bertrand Guenet, Gerhard Krinner, Shushi Peng, Mika Aurela, Christian Bernhofer, Christian Brümmer, Syndonia Bret-Harte, Housen Chu, Jiquan Chen, Ankur R. Desai, Jiří Dušek, Eugénie S. Euskirchen, Krzysztof Fortuniak, Lawrence B. Flanagan, Thomas Friborg, Mateusz Grygoruk, Sébastien Gogo, Thomas Grünwald, Birger U. Hansen, David Holl, Elyn Humphreys, Miriam Hurkuck, Gerard Kiely, Janina Klatt, Lars Kutzbach, Chloé Largeron, Fatima Laggoun-Défarge, Magnus Lund, Peter M. Lafleur, Xuefei Li, Ivan Mammarella, Lutz Merbold, Mats B. Nilsson, Janusz Olejnik, Mikaell Ottosson-Löfvenius, Walter Oechel, Frans-Jan W. Parmentier, Matthias Peichl, Norbert Pirk, Olli Peltola, Włodzimierz Pawlak, Daniel Rasse, Janne Rinne, Gaius Shaver, Hans Peter Schmid, Matteo Sottocornola, Rainer Steinbrecher, Torsten Sachs, Marek Urbaniak, Donatella Zona, and Klaudia Ziemblinska
Geosci. Model Dev., 11, 497–519, https://doi.org/10.5194/gmd-11-497-2018, https://doi.org/10.5194/gmd-11-497-2018, 2018
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Northern peatlands store large amount of soil carbon and are vulnerable to climate change. We implemented peatland hydrological and carbon accumulation processes into the ORCHIDEE land surface model. The model was evaluated against EC measurements from 30 northern peatland sites. The model generally well reproduced the spatial gradient and temporal variations in GPP and NEE at these sites. Water table depth was not well predicted but had only small influence on simulated NEE.
Wu Sun, Linda M. J. Kooijmans, Kadmiel Maseyk, Huilin Chen, Ivan Mammarella, Timo Vesala, Janne Levula, Helmi Keskinen, and Ulli Seibt
Atmos. Chem. Phys., 18, 1363–1378, https://doi.org/10.5194/acp-18-1363-2018, https://doi.org/10.5194/acp-18-1363-2018, 2018
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Most soils consume carbonyl sulfide (COS) and CO due to microbial uptake, but whether boreal forest soils act like this is uncertain. We measured growing season soil COS and CO fluxes in a Finnish pine forest. The soil behaved as a consistent and relatively invariant sink of COS and CO. Uptake rates of COS and CO decrease with soil moisture due to diffusion limitation and increase with respiration because of microbial control. Using COS to infer photosynthesis is not affected by soil COS flux.
Simon Schallhart, Pekka Rantala, Maija K. Kajos, Juho Aalto, Ivan Mammarella, Taina M. Ruuskanen, and Markku Kulmala
Atmos. Chem. Phys., 18, 815–832, https://doi.org/10.5194/acp-18-815-2018, https://doi.org/10.5194/acp-18-815-2018, 2018
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Emissions of volatile organic compounds (VOCs) have impact to air quality, human health and climate. We investigated the development of VOC exchange in a boreal forest between April and June 2013. VOC exchange and diversity increased towards summer, but over 75 % of the biogenic net exchange was driven by methanol, monoterpenes and acetone only. The boreal forest emitted less than 0.2 % carbon in form of VOCs in relation to the carbon uptake.
Kukka-Maaria Erkkilä, Anne Ojala, David Bastviken, Tobias Biermann, Jouni J. Heiskanen, Anders Lindroth, Olli Peltola, Miitta Rantakari, Timo Vesala, and Ivan Mammarella
Biogeosciences, 15, 429–445, https://doi.org/10.5194/bg-15-429-2018, https://doi.org/10.5194/bg-15-429-2018, 2018
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Global estimates of freshwater greenhouse gas emissions are usually based on simple gas transfer models that underestimate the emissions. Thus, comparison of different gas transfer models is required for evaluating the uncertainties. This study compares three commonly used methods for estimating greenhouse gas emissions over lakes. We conclude that simple gas transfer models underestimate the emissions and more recent models should be used for global freshwater greenhouse gas emission estimates.
Axel Lauer, Colin Jones, Veronika Eyring, Martin Evaldsson, Stefan Hagemann, Jarmo Mäkelä, Gill Martin, Romain Roehrig, and Shiyu Wang
Earth Syst. Dynam., 9, 33–67, https://doi.org/10.5194/esd-9-33-2018, https://doi.org/10.5194/esd-9-33-2018, 2018
Maarit Raivonen, Sampo Smolander, Leif Backman, Jouni Susiluoto, Tuula Aalto, Tiina Markkanen, Jarmo Mäkelä, Janne Rinne, Olli Peltola, Mika Aurela, Annalea Lohila, Marin Tomasic, Xuefei Li, Tuula Larmola, Sari Juutinen, Eeva-Stiina Tuittila, Martin Heimann, Sanna Sevanto, Thomas Kleinen, Victor Brovkin, and Timo Vesala
Geosci. Model Dev., 10, 4665–4691, https://doi.org/10.5194/gmd-10-4665-2017, https://doi.org/10.5194/gmd-10-4665-2017, 2017
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Wetlands are one of the most significant natural sources of the strong greenhouse gas methane. We developed a model that can be used within a larger wetland carbon model to simulate the methane emissions. In this study, we present the model and results of its testing. We found that the model works well with different settings and that the results depend primarily on the rate of input anoxic soil respiration and also on factors that affect the simulated oxygen concentrations in the wetland soil.
Robert Wagner, Chao Yan, Katrianne Lehtipalo, Jonathan Duplissy, Tuomo Nieminen, Juha Kangasluoma, Lauri R. Ahonen, Lubna Dada, Jenni Kontkanen, Hanna E. Manninen, Antonio Dias, Antonio Amorim, Paulus S. Bauer, Anton Bergen, Anne-Kathrin Bernhammer, Federico Bianchi, Sophia Brilke, Stephany Buenrostro Mazon, Xuemeng Chen, Danielle C. Draper, Lukas Fischer, Carla Frege, Claudia Fuchs, Olga Garmash, Hamish Gordon, Jani Hakala, Liine Heikkinen, Martin Heinritzi, Victoria Hofbauer, Christopher R. Hoyle, Jasper Kirkby, Andreas Kürten, Alexander N. Kvashnin, Tiia Laurila, Michael J. Lawler, Huajun Mai, Vladimir Makhmutov, Roy L. Mauldin III, Ugo Molteni, Leonid Nichman, Wei Nie, Andrea Ojdanic, Antti Onnela, Felix Piel, Lauriane L. J. Quéléver, Matti P. Rissanen, Nina Sarnela, Simon Schallhart, Kamalika Sengupta, Mario Simon, Dominik Stolzenburg, Yuri Stozhkov, Jasmin Tröstl, Yrjö Viisanen, Alexander L. Vogel, Andrea C. Wagner, Mao Xiao, Penglin Ye, Urs Baltensperger, Joachim Curtius, Neil M. Donahue, Richard C. Flagan, Martin Gallagher, Armin Hansel, James N. Smith, António Tomé, Paul M. Winkler, Douglas Worsnop, Mikael Ehn, Mikko Sipilä, Veli-Matti Kerminen, Tuukka Petäjä, and Markku Kulmala
Atmos. Chem. Phys., 17, 15181–15197, https://doi.org/10.5194/acp-17-15181-2017, https://doi.org/10.5194/acp-17-15181-2017, 2017
Elham Baranizadeh, Tuomo Nieminen, Taina Yli-Juuti, Markku Kulmala, Tuukka Petäjä, Ari Leskinen, Mika Komppula, Ari Laaksonen, and Kari E. J. Lehtinen
Atmos. Chem. Phys., 17, 13361–13371, https://doi.org/10.5194/acp-17-13361-2017, https://doi.org/10.5194/acp-17-13361-2017, 2017
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Extrapolation of the particle formation rates from one measured larger size (e.g., 7 nm) to smaller sizes (e.g., 3 nm) based on simplified growth-scavenging dynamics works fairly well to estimate mean daily formation rates, but it fails to predict the time evolution of the particle population. This points to the challenges in predicting atmospheric nucleation rates for locations where the particle growth and loss rates are size- and time-dependent.
Yao Gao, Tiina Markkanen, Mika Aurela, Ivan Mammarella, Tea Thum, Aki Tsuruta, Huiyi Yang, and Tuula Aalto
Biogeosciences, 14, 4409–4422, https://doi.org/10.5194/bg-14-4409-2017, https://doi.org/10.5194/bg-14-4409-2017, 2017
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We investigated the response of water use efficiency (WUE) to summer drought in a boreal Scots pine forest (Pinus sylvestris) on the daily time scale mainly using EC flux data from the Hyytiälä (southern Finland) flux site. Simulation results from the JSBACH land surface model were also evaluated against the observed results. The performance of three WUE metrics at the ecosystem level (EWUE, IWUE, and uWUE) during the severe summer drought were studied and showed different results.
Linda M. J. Kooijmans, Kadmiel Maseyk, Ulli Seibt, Wu Sun, Timo Vesala, Ivan Mammarella, Pasi Kolari, Juho Aalto, Alessandro Franchin, Roberta Vecchi, Gianluigi Valli, and Huilin Chen
Atmos. Chem. Phys., 17, 11453–11465, https://doi.org/10.5194/acp-17-11453-2017, https://doi.org/10.5194/acp-17-11453-2017, 2017
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Carbon cycle studies rely on the accuracy of models to estimate the amount of CO2 being taken up by vegetation. The gas carbonyl sulfide (COS) can serve as a tool to estimate the vegetative CO2 uptake by scaling the ecosystem uptake of COS to that of CO2. Here we investigate the nighttime fluxes of COS. The relationships found in this study will aid in implementing nighttime COS uptake in models, which is key to obtain accurate estimates of vegetative CO2 uptake with the use of COS.
Pavel Alekseychik, Ivan Mammarella, Dmitry Karpov, Sigrid Dengel, Irina Terentieva, Alexander Sabrekov, Mikhail Glagolev, and Elena Lapshina
Atmos. Chem. Phys., 17, 9333–9345, https://doi.org/10.5194/acp-17-9333-2017, https://doi.org/10.5194/acp-17-9333-2017, 2017
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West Siberian peatlands occupy a large fraction of land area in the region, and yet little is known about their interaction with the atmosphere. We took the first measurements of CO2 and energy surface balances over a typical bog of West Siberian middle taiga, in the vicinity of the Mukhrino field station (Khanty–Mansiysk). The May–August study in a wet year (2015) revealed a relatively large photosynthetic sink of CO2 that was close to the high end of estimates at bog sites elsewhere.
Lubna Dada, Pauli Paasonen, Tuomo Nieminen, Stephany Buenrostro Mazon, Jenni Kontkanen, Otso Peräkylä, Katrianne Lehtipalo, Tareq Hussein, Tuukka Petäjä, Veli-Matti Kerminen, Jaana Bäck, and Markku Kulmala
Atmos. Chem. Phys., 17, 6227–6241, https://doi.org/10.5194/acp-17-6227-2017, https://doi.org/10.5194/acp-17-6227-2017, 2017
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We studied new particle formation under clear-sky conditions in the boreal forest in southern Finland. We compared varying conditions between new particle events and nonevents. We then formulated a threshold value that separates new particle events from nonevents and reached a probability distribution for the frequency of new particle formation. This study serves as the basis for scientists aiming to improve their understanding of new particle formation.
Antti-Jussi Kieloaho, Mari Pihlatie, Samuli Launiainen, Markku Kulmala, Marja-Liisa Riekkola, Jevgeni Parshintsev, Ivan Mammarella, Timo Vesala, and Jussi Heinonsalo
Biogeosciences, 14, 1075–1091, https://doi.org/10.5194/bg-14-1075-2017, https://doi.org/10.5194/bg-14-1075-2017, 2017
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The alkylamines are important precursors in secondary aerosol formation in boreal forests. We quantified alkylamine concentrations in fungal species present in boreal forests in order to estimate soil as a source of atmospheric alkylamines. Based on our knowledge we estimated possible soil–atmosphere exchange of these compounds. The results shows that the boreal forest soil could act as a source of alkylamines depending on environmental conditions and studied compound.
Putian Zhou, Laurens Ganzeveld, Üllar Rannik, Luxi Zhou, Rosa Gierens, Ditte Taipale, Ivan Mammarella, and Michael Boy
Atmos. Chem. Phys., 17, 1361–1379, https://doi.org/10.5194/acp-17-1361-2017, https://doi.org/10.5194/acp-17-1361-2017, 2017
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We implemented a multi-layer O3 dry deposition model in a 1-D model SOSAA to simulate O3 flux and concentration within and above a boreal forest at SMEAR II in Hyytiälä, Finland, in August 2010. The results showed that when RH > 70 % the O3 uptake on leaf wet skin was ~ 51 % to the total deposition at night and ~ 19 % at daytime. The sub-canopy contribution below 4.2 m was ~ 38 % at daytime. The averaged daily chemical contribution to total O3 alteration inside the canopy was less than 10 %.
Aino Korrensalo, Pavel Alekseychik, Tomáš Hájek, Janne Rinne, Timo Vesala, Lauri Mehtätalo, Ivan Mammarella, and Eeva-Stiina Tuittila
Biogeosciences, 14, 257–269, https://doi.org/10.5194/bg-14-257-2017, https://doi.org/10.5194/bg-14-257-2017, 2017
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Photosynthetic parameters of peatland plant species were measured over one growing season in an ombrotrophic bog. Based on these measurements, ecosystem-level photosynthesis was calculated for the whole growing season and compared with an estimate derived from micrometeorological measurements. These two estimates corresponded well. Species with low areal cover at the site but high photosynthetic efficiency appeared to be potentially important for the ecosystem-level carbon balance.
Jarmo Mäkelä, Jouni Susiluoto, Tiina Markkanen, Mika Aurela, Heikki Järvinen, Ivan Mammarella, Stefan Hagemann, and Tuula Aalto
Nonlin. Processes Geophys., 23, 447–465, https://doi.org/10.5194/npg-23-447-2016, https://doi.org/10.5194/npg-23-447-2016, 2016
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The land-based hydrological cycle is one of the key processes controlling the growth and wilting of plants and the amount of carbon vegetation can assimilate. Recent studies have shown that many land surface models have biases in this area. We optimized parameters in one such model (JSBACH) and were able to enhance the model performance in many respects, but the response to drought remained unaffected. Further studies into this aspect should include alternative stomatal conductance formulations.
Xuemeng Chen, Veli-Matti Kerminen, Jussi Paatero, Pauli Paasonen, Hanna E. Manninen, Tuomo Nieminen, Tuukka Petäjä, and Markku Kulmala
Atmos. Chem. Phys., 16, 14297–14315, https://doi.org/10.5194/acp-16-14297-2016, https://doi.org/10.5194/acp-16-14297-2016, 2016
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Ionising radiation is responsible for air ion production. However, minor efforts have been invested in understanding the connection of observed air ions to ionising radiation in the lower atmosphere and underlying processes therein. In this work, we analysed 4 years of ambient data collected in a Finnish boreal forest and found that gamma radiation dominates air ion production in the lower atmosphere and demonstrated clear promotion effects of the ionising radiation on air ion production.
Üllar Rannik, Olli Peltola, and Ivan Mammarella
Atmos. Meas. Tech., 9, 5163–5181, https://doi.org/10.5194/amt-9-5163-2016, https://doi.org/10.5194/amt-9-5163-2016, 2016
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We review available methods for the random error estimation of turbulent fluxes that are widely used by the flux community. Flux errors are evaluated theoretically as well as via numerical calculations by using measured and simulated records. We recommend two flux random errors with clear physical meaning: the total error resulting from stochastic nature of turbulence, well approximated by the method of Finkelstein and Sims (2001), and the error of the flux due to the instrumental noise.
Ivan Mammarella, Olli Peltola, Annika Nordbo, Leena Järvi, and Üllar Rannik
Atmos. Meas. Tech., 9, 4915–4933, https://doi.org/10.5194/amt-9-4915-2016, https://doi.org/10.5194/amt-9-4915-2016, 2016
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In this study we have performed an inter-comparison between EddyUH and EddyPro, two public and commonly used software packages for eddy covariance data processing and calculation. The aims are to estimate the flux uncertainty due to the use of different software packages, and to assess the most critical processing steps, determining the largest deviations in the calculated fluxes. We focus not only on water vapour and carbon dioxide fluxes, but also on the methane flux.
Mari Pihlatie, Üllar Rannik, Sami Haapanala, Olli Peltola, Narasinha Shurpali, Pertti J. Martikainen, Saara Lind, Niina Hyvönen, Perttu Virkajärvi, Mark Zahniser, and Ivan Mammarella
Biogeosciences, 13, 5471–5485, https://doi.org/10.5194/bg-13-5471-2016, https://doi.org/10.5194/bg-13-5471-2016, 2016
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The sources and sinks of carbon monoxide (CO) in the biosphere are poorly understood. We report the first continuous data series of CO fluxes measured by eddy covariance method in an agricultural bioenergy crop. The CO fluxes were seasonally and diurnally variable demonstrating the parallel consumption and production processes. Radiation was the main driver of CO emissions, and the eddy covariance method was demonstrated as suitable for linking short-term flux dynamics to environmental drivers.
Andrey Glazunov, Üllar Rannik, Victor Stepanenko, Vasily Lykosov, Mikko Auvinen, Timo Vesala, and Ivan Mammarella
Geosci. Model Dev., 9, 2925–2949, https://doi.org/10.5194/gmd-9-2925-2016, https://doi.org/10.5194/gmd-9-2925-2016, 2016
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Large-eddy simulation (LES) and Lagrangian stochastic modeling of passive particle dispersion were applied to the scalar flux footprint determination in the stable atmospheric boundary layer. The footprint functions obtained in LES were compared with the functions calculated with the use of first-order single-particle Lagrangian stochastic models (LSMs) and zeroth-order Lagrangian stochastic models - the random displacement models (RDMs).
Imre Salma, Zoltán Németh, Veli-Matti Kerminen, Pasi Aalto, Tuomo Nieminen, Tamás Weidinger, Ágnes Molnár, Kornélia Imre, and Markku Kulmala
Atmos. Chem. Phys., 16, 8715–8728, https://doi.org/10.5194/acp-16-8715-2016, https://doi.org/10.5194/acp-16-8715-2016, 2016
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We revealed that NPF seen in a central large city of the Carpathian Basin, Budapest, and its regional background occur in a consistent and spatially coherent way as a result of a joint atmospheric phenomenon taking place on large horizontal scales.
Riikka Väänänen, Radovan Krejci, Hanna E. Manninen, Antti Manninen, Janne Lampilahti, Stephany Buenrostro Mazon, Tuomo Nieminen, Taina Yli-Juuti, Jenni Kontkanen, Ari Asmi, Pasi P. Aalto, Petri Keronen, Toivo Pohja, Ewan O'Connor, Veli-Matti Kerminen, Tuukka Petäjä, and Markku Kulmala
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2016-556, https://doi.org/10.5194/acp-2016-556, 2016
Revised manuscript has not been submitted
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A light aircraft was used as a platform to explore the horizontal and vertical variability of the aerosol particles over a boreal forest in Central Finland. This information is needed when data measured at ground level station is extrapolated and parameterized to represent the
conditions of the larger scale. The measurements showed that despite local fluctuations there was a good agreement between the on-ground and airborne measurements inside the planetary boundary layer.
Alessandro Franchin, Andy Downard, Juha Kangasluoma, Tuomo Nieminen, Katrianne Lehtipalo, Gerhard Steiner, Hanna E. Manninen, Tuukka Petäjä, Richard C. Flagan, and Markku Kulmala
Atmos. Meas. Tech., 9, 2709–2720, https://doi.org/10.5194/amt-9-2709-2016, https://doi.org/10.5194/amt-9-2709-2016, 2016
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High transmission efficiency is key for classifying and counting atmospheric aerosol below 10 nm. We developed a new high-transmission inlet for the Caltech nano-radial DMA (nRDMA) and successfully deployed the nRDMA, equipped with the new inlet, in chamber measurements, using a particle size magnifier (PSM) and a booster CPC as a counter. With this setup, we were able to measure size distributions of ions between 1.3 and 6 nm in mobility diameter.
Victor Stepanenko, Ivan Mammarella, Anne Ojala, Heli Miettinen, Vasily Lykosov, and Timo Vesala
Geosci. Model Dev., 9, 1977–2006, https://doi.org/10.5194/gmd-9-1977-2016, https://doi.org/10.5194/gmd-9-1977-2016, 2016
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A 1-D lake model is presented, reproducing temperature, oxygen, carbon dioxide and methane. All prognostic variables are treated in unified manner via generic 1-D transport equation. The model is validated vs. comprehensive observational data set gathered at Kuivajärvi Lake (Finland). Our results suggest that a gas transfer through thermocline under intense seiche motions is a bottleneck in quantifying greenhouse gas dynamics in dimictic lakes, calling for further research.
Veronika Eyring, Mattia Righi, Axel Lauer, Martin Evaldsson, Sabrina Wenzel, Colin Jones, Alessandro Anav, Oliver Andrews, Irene Cionni, Edouard L. Davin, Clara Deser, Carsten Ehbrecht, Pierre Friedlingstein, Peter Gleckler, Klaus-Dirk Gottschaldt, Stefan Hagemann, Martin Juckes, Stephan Kindermann, John Krasting, Dominik Kunert, Richard Levine, Alexander Loew, Jarmo Mäkelä, Gill Martin, Erik Mason, Adam S. Phillips, Simon Read, Catherine Rio, Romain Roehrig, Daniel Senftleben, Andreas Sterl, Lambertus H. van Ulft, Jeremy Walton, Shiyu Wang, and Keith D. Williams
Geosci. Model Dev., 9, 1747–1802, https://doi.org/10.5194/gmd-9-1747-2016, https://doi.org/10.5194/gmd-9-1747-2016, 2016
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A community diagnostics and performance metrics tool for the evaluation of Earth system models (ESMs) in CMIP has been developed that allows for routine comparison of single or multiple models, either against predecessor versions or against observations.
Üllar Rannik, Luxi Zhou, Putian Zhou, Rosa Gierens, Ivan Mammarella, Andrey Sogachev, and Michael Boy
Atmos. Chem. Phys., 16, 3145–3160, https://doi.org/10.5194/acp-16-3145-2016, https://doi.org/10.5194/acp-16-3145-2016, 2016
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Atmospheric boundary layer (ABL) model coupled with detailed atmospheric chemistry and aerosol dynamical model was used to quantify the role of aerosol and ABL dynamics in the vertical transport of aerosols at a pine forest site in southern Finland. Simulations showed that under dynamical conditions the particle fluxes above canopy can significantly deviate from the dry deposition into the canopy. The deviation can be systematic for certain particle sizes over a period of several days.
Saara E. Lind, Narasinha J. Shurpali, Olli Peltola, Ivan Mammarella, Niina Hyvönen, Marja Maljanen, Mari Räty, Perttu Virkajärvi, and Pertti J. Martikainen
Biogeosciences, 13, 1255–1268, https://doi.org/10.5194/bg-13-1255-2016, https://doi.org/10.5194/bg-13-1255-2016, 2016
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We showed that the reed canary grass (RCG) was environmentally friendly from the CO2 balance point of view when cultivated on this mineral soil. When compared to the earlier findings on the same crop on organic soil site, the capacity of the crop to withdraw atmospheric CO2 was even stronger on the present mineral soil site than that on the organic soil site. For full estimation of the climatic impacts of this bioenergy system, a life cycle assessment will be needed.
A. Collalti, S. Marconi, A. Ibrom, C. Trotta, A. Anav, E. D'Andrea, G. Matteucci, L. Montagnani, B. Gielen, I. Mammarella, T. Grünwald, A. Knohl, F. Berninger, Y. Zhao, R. Valentini, and M. Santini
Geosci. Model Dev., 9, 479–504, https://doi.org/10.5194/gmd-9-479-2016, https://doi.org/10.5194/gmd-9-479-2016, 2016
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This study evaluates the performances of the new version (v.5.1) of 3D-CMCC Forest Ecosystem Model in simulating gross primary productivity (GPP), against eddy covariance GPP data for 10 FLUXNET forest sites across Europe. The model consistently reproduces both in timing and in magnitude daily and monthly GPP variability across all sites, with the exception of the two Mediterranean sites. Inclusion of forest structure within simulation ameliorate in some cases the model output.
Y. Gao, T. Markkanen, T. Thum, M. Aurela, A. Lohila, I. Mammarella, M. Kämäräinen, S. Hagemann, and T. Aalto
Hydrol. Earth Syst. Sci., 20, 175–191, https://doi.org/10.5194/hess-20-175-2016, https://doi.org/10.5194/hess-20-175-2016, 2016
V. N. Dos Santos, E. Herrmann, H. E. Manninen, T. Hussein, J. Hakala, T. Nieminen, P. P. Aalto, M. Merkel, A. Wiedensohler, M. Kulmala, T. Petäjä, and K. Hämeri
Atmos. Chem. Phys., 15, 13717–13737, https://doi.org/10.5194/acp-15-13717-2015, https://doi.org/10.5194/acp-15-13717-2015, 2015
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Atmospheric charged particles, i.e. air ions, contribute to secondary aerosol formation and have an effect on global climate as potential cloud condensation nuclei. We aimed to evaluate air ion concentrations and characteristics during new particle formation (NPF) events in the megacity Paris, France. We analyzed frequency and seasonal variations of NPF events, diurnal and seasonal cycles of ions, and aerosol particles.
J. Patokoski, T. M. Ruuskanen, M. K. Kajos, R. Taipale, P. Rantala, J. Aalto, T. Ryyppö, T. Nieminen, H. Hakola, and J. Rinne
Atmos. Chem. Phys., 15, 13413–13432, https://doi.org/10.5194/acp-15-13413-2015, https://doi.org/10.5194/acp-15-13413-2015, 2015
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In this study, main source areas for long-lived VOCs at the boreal forest in SMEAR II were determined. Air masses arriving from eastern and western directions were more polluted than those arriving from the northern direction. The biogenic and anthropogenic influences of three different source profiles were determined. The elevated trace gas concentrations from forest fire episodes were observed clearly in the trajectory analysis.
T. Nieminen, T. Yli-Juuti, H. E. Manninen, T. Petäjä, V.-M. Kerminen, and M. Kulmala
Atmos. Chem. Phys., 15, 12385–12396, https://doi.org/10.5194/acp-15-12385-2015, https://doi.org/10.5194/acp-15-12385-2015, 2015
J. Hong, J. Kim, T. Nieminen, J. Duplissy, M. Ehn, M. Äijälä, L. Q. Hao, W. Nie, N. Sarnela, N. L. Prisle, M. Kulmala, A. Virtanen, T. Petäjä, and V.-M. Kerminen
Atmos. Chem. Phys., 15, 11999–12009, https://doi.org/10.5194/acp-15-11999-2015, https://doi.org/10.5194/acp-15-11999-2015, 2015
D. Wimmer, K. Lehtipalo, T. Nieminen, J. Duplissy, S. Ehrhart, J. Almeida, L. Rondo, A. Franchin, F. Kreissl, F. Bianchi, H. E. Manninen, M. Kulmala, J. Curtius, and T. Petäjä
Atmos. Chem. Phys., 15, 7547–7555, https://doi.org/10.5194/acp-15-7547-2015, https://doi.org/10.5194/acp-15-7547-2015, 2015
F. Minunno, M. Peltoniemi, S. Launiainen, M. Aurela, A. Lindroth, A. Lohila, I. Mammarella, K. Minkkinen, and A. Mäkelä
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmdd-8-5089-2015, https://doi.org/10.5194/gmdd-8-5089-2015, 2015
Revised manuscript not accepted
A. Franchin, S. Ehrhart, J. Leppä, T. Nieminen, S. Gagné, S. Schobesberger, D. Wimmer, J. Duplissy, F. Riccobono, E. M. Dunne, L. Rondo, A. Downard, F. Bianchi, A. Kupc, G. Tsagkogeorgas, K. Lehtipalo, H. E. Manninen, J. Almeida, A. Amorim, P. E. Wagner, A. Hansel, J. Kirkby, A. Kürten, N. M. Donahue, V. Makhmutov, S. Mathot, A. Metzger, T. Petäjä, R. Schnitzhofer, M. Sipilä, Y. Stozhkov, A. Tomé, V.-M. Kerminen, K. Carslaw, J. Curtius, U. Baltensperger, and M. Kulmala
Atmos. Chem. Phys., 15, 7203–7216, https://doi.org/10.5194/acp-15-7203-2015, https://doi.org/10.5194/acp-15-7203-2015, 2015
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The ion-ion recombination coefficient was measured at different temperatures, relative humidities and concentrations of ozone and sulfur dioxide. The experiments were carried out using the CLOUD chamber at CERN.
We observed a strong dependency on temperature and on relative humidity, which has not been reported previously. No dependency of the ion-ion recombination coefficient on ozone concentration was observed and a weak variation with sulfur dioxide concentration was also observed.
A.-M. Sundström, A. Nikandrova, K. Atlaskina, T. Nieminen, V. Vakkari, L. Laakso, J. P. Beukes, A. Arola, P. G. van Zyl, M. Josipovic, A. D. Venter, K. Jaars, J. J. Pienaar, S. Piketh, A. Wiedensohler, E. K. Chiloane, G. de Leeuw, and M. Kulmala
Atmos. Chem. Phys., 15, 4983–4996, https://doi.org/10.5194/acp-15-4983-2015, https://doi.org/10.5194/acp-15-4983-2015, 2015
Ü. Rannik, S. Haapanala, N. J. Shurpali, I. Mammarella, S. Lind, N. Hyvönen, O. Peltola, M. Zahniser, P. J. Martikainen, and T. Vesala
Biogeosciences, 12, 415–432, https://doi.org/10.5194/bg-12-415-2015, https://doi.org/10.5194/bg-12-415-2015, 2015
M. Vestenius, H. Hellén, J. Levula, P. Kuronen, K.J. Helminen, T. Nieminen, M. Kulmala, and H. Hakola
Atmos. Chem. Phys., 14, 7883–7893, https://doi.org/10.5194/acp-14-7883-2014, https://doi.org/10.5194/acp-14-7883-2014, 2014
O. Peltola, A. Hensen, C. Helfter, L. Belelli Marchesini, F. C. Bosveld, W. C. M. van den Bulk, J. A. Elbers, S. Haapanala, J. Holst, T. Laurila, A. Lindroth, E. Nemitz, T. Röckmann, A. T. Vermeulen, and I. Mammarella
Biogeosciences, 11, 3163–3186, https://doi.org/10.5194/bg-11-3163-2014, https://doi.org/10.5194/bg-11-3163-2014, 2014
J. Hong, S. A. K. Häkkinen, M. Paramonov, M. Äijälä, J. Hakala, T. Nieminen, J. Mikkilä, N. L. Prisle, M. Kulmala, I. Riipinen, M. Bilde, V.-M. Kerminen, and T. Petäjä
Atmos. Chem. Phys., 14, 4733–4748, https://doi.org/10.5194/acp-14-4733-2014, https://doi.org/10.5194/acp-14-4733-2014, 2014
A. Virkkula, J. Levula, T. Pohja, P. P. Aalto, P. Keronen, S. Schobesberger, C. B. Clements, L. Pirjola, A.-J. Kieloaho, L. Kulmala, H. Aaltonen, J. Patokoski, J. Pumpanen, J. Rinne, T. Ruuskanen, M. Pihlatie, H. E. Manninen, V. Aaltonen, H. Junninen, T. Petäjä, J. Backman, M. Dal Maso, T. Nieminen, T. Olsson, T. Grönholm, J. Aalto, T. H. Virtanen, M. Kajos, V.-M. Kerminen, D. M. Schultz, J. Kukkonen, M. Sofiev, G. De Leeuw, J. Bäck, P. Hari, and M. Kulmala
Atmos. Chem. Phys., 14, 4473–4502, https://doi.org/10.5194/acp-14-4473-2014, https://doi.org/10.5194/acp-14-4473-2014, 2014
E.-M. Kyrö, R. Väänänen, V.-M. Kerminen, A. Virkkula, T. Petäjä, A. Asmi, M. Dal Maso, T. Nieminen, S. Juhola, A. Shcherbinin, I. Riipinen, K. Lehtipalo, P. Keronen, P. P. Aalto, P. Hari, and M. Kulmala
Atmos. Chem. Phys., 14, 4383–4396, https://doi.org/10.5194/acp-14-4383-2014, https://doi.org/10.5194/acp-14-4383-2014, 2014
E. Herrmann, A. J. Ding, V.-M. Kerminen, T. Petäjä, X. Q. Yang, J. N. Sun, X. M. Qi, H. Manninen, J. Hakala, T. Nieminen, P. P. Aalto, M. Kulmala, and C. B. Fu
Atmos. Chem. Phys., 14, 2169–2183, https://doi.org/10.5194/acp-14-2169-2014, https://doi.org/10.5194/acp-14-2169-2014, 2014
R. Väänänen, E.-M. Kyrö, T. Nieminen, N. Kivekäs, H. Junninen, A. Virkkula, M. Dal Maso, H. Lihavainen, Y. Viisanen, B. Svenningsson, T. Holst, A. Arneth, P. P. Aalto, M. Kulmala, and V.-M. Kerminen
Atmos. Chem. Phys., 13, 11887–11903, https://doi.org/10.5194/acp-13-11887-2013, https://doi.org/10.5194/acp-13-11887-2013, 2013
J. Kontkanen, K. E. J. Lehtinen, T. Nieminen, H. E. Manninen, K. Lehtipalo, V.-M. Kerminen, and M. Kulmala
Atmos. Chem. Phys., 13, 11391–11401, https://doi.org/10.5194/acp-13-11391-2013, https://doi.org/10.5194/acp-13-11391-2013, 2013
S. A. K. Häkkinen, H. E. Manninen, T. Yli-Juuti, J. Merikanto, M. K. Kajos, T. Nieminen, S. D. D'Andrea, A. Asmi, J. R. Pierce, M. Kulmala, and I. Riipinen
Atmos. Chem. Phys., 13, 7665–7682, https://doi.org/10.5194/acp-13-7665-2013, https://doi.org/10.5194/acp-13-7665-2013, 2013
E. Järvinen, A. Virkkula, T. Nieminen, P. P. Aalto, E. Asmi, C. Lanconelli, M. Busetto, A. Lupi, R. Schioppo, V. Vitale, M. Mazzola, T. Petäjä, V.-M. Kerminen, and M. Kulmala
Atmos. Chem. Phys., 13, 7473–7487, https://doi.org/10.5194/acp-13-7473-2013, https://doi.org/10.5194/acp-13-7473-2013, 2013
M. K. Kajos, H. Hakola, T. Holst, T. Nieminen, V. Tarvainen, T. Maximov, T. Petäjä, A. Arneth, and J. Rinne
Biogeosciences, 10, 4705–4719, https://doi.org/10.5194/bg-10-4705-2013, https://doi.org/10.5194/bg-10-4705-2013, 2013
O. Peltola, I. Mammarella, S. Haapanala, G. Burba, and T. Vesala
Biogeosciences, 10, 3749–3765, https://doi.org/10.5194/bg-10-3749-2013, https://doi.org/10.5194/bg-10-3749-2013, 2013
H. Keskinen, A. Virtanen, J. Joutsensaari, G. Tsagkogeorgas, J. Duplissy, S. Schobesberger, M. Gysel, F. Riccobono, J. G. Slowik, F. Bianchi, T. Yli-Juuti, K. Lehtipalo, L. Rondo, M. Breitenlechner, A. Kupc, J. Almeida, A. Amorim, E. M. Dunne, A. J. Downard, S. Ehrhart, A. Franchin, M.K. Kajos, J. Kirkby, A. Kürten, T. Nieminen, V. Makhmutov, S. Mathot, P. Miettinen, A. Onnela, T. Petäjä, A. Praplan, F. D. Santos, S. Schallhart, M. Sipilä, Y. Stozhkov, A. Tomé, P. Vaattovaara, D. Wimmer, A. Prevot, J. Dommen, N. M. Donahue, R.C. Flagan, E. Weingartner, Y. Viisanen, I. Riipinen, A. Hansel, J. Curtius, M. Kulmala, D. R. Worsnop, U. Baltensperger, H. Wex, F. Stratmann, and A. Laaksonen
Atmos. Chem. Phys., 13, 5587–5600, https://doi.org/10.5194/acp-13-5587-2013, https://doi.org/10.5194/acp-13-5587-2013, 2013
M. Boy, D. Mogensen, S. Smolander, L. Zhou, T. Nieminen, P. Paasonen, C. Plass-Dülmer, M. Sipilä, T. Petäjä, L. Mauldin, H. Berresheim, and M. Kulmala
Atmos. Chem. Phys., 13, 3865–3879, https://doi.org/10.5194/acp-13-3865-2013, https://doi.org/10.5194/acp-13-3865-2013, 2013
E. Herrmann, A. J. Ding, T. Petäjä, X. Q. Yang, J. N. Sun, X. M. Qi, H. Manninen, J. Hakala, T. Nieminen, P. P. Aalto, V.-M. Kerminen, M. Kulmala, and C. B. Fu
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-13-1455-2013, https://doi.org/10.5194/acpd-13-1455-2013, 2013
Revised manuscript not accepted
Related subject area
Biogeochemistry: Air - Land Exchange
Update of a biogeochemical model with process-based algorithms to predict ammonia volatilization from fertilized cultivated uplands and rice paddy fields
Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment
Climatic variation drives loss and restructuring of carbon and nitrogen in boreal forest wildfire
Gaps in network infrastructure limit our understanding of biogenic methane emissions for the United States
Changes of the aerodynamic characteristics of a flux site after an extensive windthrow
Carbon sequestration potential of street tree plantings in Helsinki
Sensitivity of biomass burning emissions estimates to land surface information
A convolutional neural network for spatial downscaling of satellite-based solar-induced chlorophyll fluorescence (SIFnet)
Influence of plant ecophysiology on ozone dry deposition: comparing between multiplicative and photosynthesis-based dry deposition schemes and their responses to rising CO2 level
Modeling the interinfluence of fertilizer-induced NH3 emission, nitrogen deposition, and aerosol radiative effects using modified CESM2
Physiological and climate controls on foliar mercury uptake by European tree species
Radiation, soil water content, and temperature effects on carbon cycling in an alpine swamp meadow of the northeastern Qinghai–Tibetan Plateau
Representativeness assessment of the pan-Arctic eddy covariance site network and optimized future enhancements
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part I: Measuring temporal dynamics
Ideas and perspectives: Emerging contours of a dynamic exogenous kerogen cycle
Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection
On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes
Mercury accumulation in leaves of different plant types – the significance of tissue age and specific leaf area
Isolation of subpollen particles (SPPs) of birch: SPPs are potential carriers of ice nucleating macromolecules
Choosing an optimal β factor for relaxed eddy accumulation applications across vegetated and non-vegetated surfaces
Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea
Ice nucleation by viruses and their potential for cloud glaciation
Carbon dioxide fluxes and carbon balance of an agricultural grassland in southern Finland
Sun-induced fluorescence and near-infrared reflectance of vegetation track the seasonal dynamics of gross primary production over Africa
Measurement and modelling of the dynamics of NH3 surface–atmosphere exchange over the Amazonian rainforest
Isoprene and monoterpene emissions from alder, aspen and spruce short-rotation forest plantations in the United Kingdom
Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia)
Methane efflux from an American bison herd
Technical note: Inexpensive modification of Exetainers for the reliable storage of trace-level hydrogen and carbon monoxide gas samples
A climate-dependent global model of ammonia emissions from chicken farming
Calculating canopy stomatal conductance from eddy covariance measurements, in light of the energy budget closure problem
Decoupling of a Douglas fir canopy: a look into the subcanopy with continuous vertical temperature profiles
Variations in diurnal and seasonal net ecosystem carbon dioxide exchange in a semiarid sandy grassland ecosystem in China's Horqin Sandy Land
Biogenic volatile organic compound ambient mixing ratios and emission rates in the Alaskan Arctic tundra
Quantifying the spatial extent and intensity of recent extreme drought events in the Amazon rainforest and their impacts on the carbon cycle
Surfaces of silver birch (Betula pendula) are sources of biological ice nuclei: in vivo and in situ investigations
Ideas and perspectives: enhancing the impact of the FLUXNET network of eddy covariance sites
Evapotranspiration over agroforestry sites in Germany
OH reactivity from the emissions of different tree species: investigating the missing reactivity in a boreal forest
Vegetation influence and environmental controls on greenhouse gas fluxes from a drained thermokarst lake in the western Canadian Arctic
Examining the link between vegetation leaf area and land–atmosphere exchange of water, energy, and carbon fluxes using FLUXNET data
CloudRoots: integration of advanced instrumental techniques and process modelling of sub-hourly and sub-kilometre land–atmosphere interactions
Environmental controls on ecosystem-scale cold-season methane and carbon dioxide fluxes in an Arctic tundra ecosystem
Distinguishing between early- and late-covering crops in the land surface model Noah-MP: impact on simulated surface energy fluxes and temperature
A robust data cleaning procedure for eddy covariance flux measurements
Scaling carbon fluxes from eddy covariance sites to globe: synthesis and evaluation of the FLUXCOM approach
Leveraging the signature of heterotrophic respiration on atmospheric CO2 for model benchmarking
Estimating causal networks in biosphere–atmosphere interaction with the PCMCI approach
A double peak in the seasonality of California's photosynthesis as observed from space
Nitrogen use efficiency and N2O and NH3 losses attributed to three fertiliser types applied to an intensively managed silage crop
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
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The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
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Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
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This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
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To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
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This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
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The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Makoto Saito, Tomohiro Shiraishi, Ryuichi Hirata, Yosuke Niwa, Kazuyuki Saito, Martin Steinbacher, Doug Worthy, and Tsuneo Matsunaga
Biogeosciences, 19, 2059–2078, https://doi.org/10.5194/bg-19-2059-2022, https://doi.org/10.5194/bg-19-2059-2022, 2022
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This study tested combinations of two sources of AGB data and two sources of LCC data and used the same burned area satellite data to estimate BB CO emissions. Our analysis showed large discrepancies in annual mean CO emissions and explicit differences in the simulated CO concentrations among the BB emissions estimates. This study has confirmed that BB emissions estimates are sensitive to the land surface information on which they are based.
Johannes Gensheimer, Alexander J. Turner, Philipp Köhler, Christian Frankenberg, and Jia Chen
Biogeosciences, 19, 1777–1793, https://doi.org/10.5194/bg-19-1777-2022, https://doi.org/10.5194/bg-19-1777-2022, 2022
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We develop a convolutional neural network, named SIFnet, that increases the spatial resolution of SIF from TROPOMI by a factor of 10 to a spatial resolution of 0.005°. SIFnet utilizes coarse SIF observations, together with a broad range of high-resolution auxiliary data. The insights gained from interpretable machine learning techniques allow us to make quantitative claims about the relationships between SIF and other common parameters related to photosynthesis.
Shihan Sun, Amos P. K. Tai, David H. Y. Yung, Anthony Y. H. Wong, Jason A. Ducker, and Christopher D. Holmes
Biogeosciences, 19, 1753–1776, https://doi.org/10.5194/bg-19-1753-2022, https://doi.org/10.5194/bg-19-1753-2022, 2022
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We developed and used a terrestrial biosphere model to compare and evaluate widely used empirical dry deposition schemes with different stomatal approaches and found that using photosynthesis-based stomatal approaches can reduce biases in modeled dry deposition velocities in current chemical transport models. Our study shows systematic errors in current dry deposition schemes and the importance of representing plant ecophysiological processes in models under a changing climate.
Ka Ming Fung, Maria Val Martin, and Amos P. K. Tai
Biogeosciences, 19, 1635–1655, https://doi.org/10.5194/bg-19-1635-2022, https://doi.org/10.5194/bg-19-1635-2022, 2022
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Fertilizer-induced ammonia detrimentally affects the environment by not only directly damaging ecosystems but also indirectly altering climate and soil fertility. To quantify these secondary impacts, we enabled CESM to simulate ammonia emission, chemical evolution, and deposition as a continuous cycle. If synthetic fertilizer use is to soar by 30 % from today's level, we showed that the counteracting impacts will increase the global ammonia emission by 3.3 Tg N per year.
Lena Wohlgemuth, Pasi Rautio, Bernd Ahrends, Alexander Russ, Lars Vesterdal, Peter Waldner, Volkmar Timmermann, Nadine Eickenscheidt, Alfred Fürst, Martin Greve, Peter Roskams, Anne Thimonier, Manuel Nicolas, Anna Kowalska, Morten Ingerslev, Päivi Merilä, Sue Benham, Carmen Iacoban, Günter Hoch, Christine Alewell, and Martin Jiskra
Biogeosciences, 19, 1335–1353, https://doi.org/10.5194/bg-19-1335-2022, https://doi.org/10.5194/bg-19-1335-2022, 2022
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Gaseous mercury is present in the atmosphere all over the globe. During the growing season, plants take up mercury from the air in a similar way as CO2. We investigated which factors impact this vegetational mercury uptake by analyzing a large dataset of leaf mercury uptake rates of trees in Europe. As a result, we conclude that mercury uptake is foremost controlled by tree-intrinsic traits like physiological activity but also by climatic factors like dry conditions in the air and in soils.
Junqi Wei, Xiaoyan Li, Lei Liu, Torben Røjle Christensen, Zhiyun Jiang, Yujun Ma, Xiuchen Wu, Hongyun Yao, and Efrén López-Blanco
Biogeosciences, 19, 861–875, https://doi.org/10.5194/bg-19-861-2022, https://doi.org/10.5194/bg-19-861-2022, 2022
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Although water availability has been linked to the response of ecosystem carbon (C) sink–source to climate warming, the mechanisms by which C uptake responds to soil moisture remain unclear. We explored how soil water and other environmental drivers modulate net C uptake in an alpine swamp meadow. Results reveal that nearly saturated soil conditions during warm seasons can help to maintain lower ecosystem respiration and therefore enhance the C sequestration capacity in this alpine swamp meadow.
Martijn M. T. A. Pallandt, Jitendra Kumar, Marguerite Mauritz, Edward A. G. Schuur, Anna-Maria Virkkala, Gerardo Celis, Forrest M. Hoffman, and Mathias Göckede
Biogeosciences, 19, 559–583, https://doi.org/10.5194/bg-19-559-2022, https://doi.org/10.5194/bg-19-559-2022, 2022
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Thawing of Arctic permafrost soils could trigger the release of vast amounts of carbon to the atmosphere, thus enhancing climate change. Our study investigated how well the current network of eddy covariance sites to monitor greenhouse gas exchange at local scales captures pan-Arctic flux patterns. We identified large coverage gaps, e.g., in Siberia, but also demonstrated that a targeted addition of relatively few sites can significantly improve network performance.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, and Christian Brümmer
Biogeosciences, 19, 389–413, https://doi.org/10.5194/bg-19-389-2022, https://doi.org/10.5194/bg-19-389-2022, 2022
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Fluxes of total reactive nitrogen (∑Nr) over a low polluted forest were analyzed with regard to their temporal dynamics. Mostly deposition was observed with median fluxes ranging from −15 to −5 ng N m−2 s−1, corresponding to a range of deposition velocities from 0.2 to 0.5 cm s−1. While seasonally changing contributions of NH3 and NOx to the ∑Nr signal were found, we estimate an annual total N deposition (dry+wet) of 12.2 and 10.9 kg N ha−1 a−1 in the 2 years of observation.
Thomas M. Blattmann
Biogeosciences, 19, 359–373, https://doi.org/10.5194/bg-19-359-2022, https://doi.org/10.5194/bg-19-359-2022, 2022
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This work enunciates the possibility of kerogen oxidation contributing to atmospheric CO2 increase in the wake of glacial episodes. This hypothesis is substantiated by several lines of independent evidence synthesized in this contribution. The author hypothesizes that the deglaciation of kerogen-rich lithologies in western Canada contributed to the characteristic deglacial increase in atmospheric CO2.
Juliana Gil-Loaiza, Joseph R. Roscioli, Joanne H. Shorter, Till H. M. Volkmann, Wei-Ren Ng, Jordan E. Krechmer, and Laura K. Meredith
Biogeosciences, 19, 165–185, https://doi.org/10.5194/bg-19-165-2022, https://doi.org/10.5194/bg-19-165-2022, 2022
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We evaluated a new diffusive soil probe integrated with high-resolution gas analyzers to measure soil gases in real time at a centimeter scale. Using columns with simple silica and soil, we captured changes in carbon dioxide (CO2), volatile organic compounds (VOCs), and nitrous oxide (N2O) with its isotopes to distinguish potential nutrient sources and microbial metabolism. This approach will advance the use of soil gases as important signals to understand and monitor soil fertility and health.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 29–45, https://doi.org/10.5194/bg-19-29-2022, https://doi.org/10.5194/bg-19-29-2022, 2022
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Modeling vegetation canopy is important in predicting whether the land remains a carbon sink to mitigate climate change in the near future. Vegetation canopy model complexity, however, impacts the model-predicted carbon and water fluxes as well as canopy fluorescence, even if the same suite of model inputs is used. Given the biases caused by canopy model complexity, we recommend not misusing parameters inverted using different models or assumptions.
Håkan Pleijel, Jenny Klingberg, Michelle Nerentorp, Malin C. Broberg, Brigitte Nyirambangutse, John Munthe, and Göran Wallin
Biogeosciences, 18, 6313–6328, https://doi.org/10.5194/bg-18-6313-2021, https://doi.org/10.5194/bg-18-6313-2021, 2021
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Mercury is a problematic metal in the environment. It is crucial to understand the Hg circulation in ecosystems. We explored the mercury concentration in foliage from a diverse set of plants, locations and sampling periods to study the accumulation of Hg in leaves–needles over time. Mercury was always higher in older tissue: in broadleaved trees, conifers and wheat. Specific leaf area, the leaf area per unit leaf mass, turned out to be critical for Hg accumulation in leaves–needles.
Julia Burkart, Jürgen Gratzl, Teresa M. Seifried, Paul Bieber, and Hinrich Grothe
Biogeosciences, 18, 5751–5765, https://doi.org/10.5194/bg-18-5751-2021, https://doi.org/10.5194/bg-18-5751-2021, 2021
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Extracts of birch pollen grains are known to be ice nucleation active and thus impact cloud formation and climate. In this study we develop an extraction method to separate subpollen particles from ice nucleating macromolecules. Our results thereby illustrate that ice nucleating macromolecules can be washed off the subpollen particles and that the ice activity is linked to the presence of proteins.
Teresa Vogl, Amy Hrdina, and Christoph K. Thomas
Biogeosciences, 18, 5097–5115, https://doi.org/10.5194/bg-18-5097-2021, https://doi.org/10.5194/bg-18-5097-2021, 2021
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The relaxed eddy accumulation technique is a method used for measuring fluxes of chemical species in the atmosphere. It relies on a proportionality factor, β, which can be determined using different methods. Also, different techniques for sampling can be used by only drawing air into the measurement system when vertical wind velocity exceeds a certain threshold. We compare different ways to obtain β and different threshold techniques to direct flux measurements for three different sites.
Maria Prass, Meinrat O. Andreae, Alessandro C. de Araùjo, Paulo Artaxo, Florian Ditas, Wolfgang Elbert, Jan-David Förster, Marco Aurélio Franco, Isabella Hrabe de Angelis, Jürgen Kesselmeier, Thomas Klimach, Leslie Ann Kremper, Eckhard Thines, David Walter, Jens Weber, Bettina Weber, Bernhard M. Fuchs, Ulrich Pöschl, and Christopher Pöhlker
Biogeosciences, 18, 4873–4887, https://doi.org/10.5194/bg-18-4873-2021, https://doi.org/10.5194/bg-18-4873-2021, 2021
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Bioaerosols in the atmosphere over the Amazon rain forest were analyzed by molecular biological staining and microscopy. Eukaryotic, bacterial, and archaeal aerosols were quantified in time series and altitude profiles which exhibited clear differences in number concentrations and vertical distributions. Our results provide insights into the sources and dispersion of different Amazonian bioaerosol types as a basis for a better understanding of biosphere–atmosphere interactions.
Michael P. Adams, Nina S. Atanasova, Svetlana Sofieva, Janne Ravantti, Aino Heikkinen, Zoé Brasseur, Jonathan Duplissy, Dennis H. Bamford, and Benjamin J. Murray
Biogeosciences, 18, 4431–4444, https://doi.org/10.5194/bg-18-4431-2021, https://doi.org/10.5194/bg-18-4431-2021, 2021
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The formation of ice in clouds is critically important for the planet's climate. Hence, we need to know which aerosol types nucleate ice and how effectively they do so. Here we show that virus particles, with a range of architectures, nucleate ice when immersed in supercooled water. However, we also show that they only make a minor contribution to the ice-nucleating particle population in the terrestrial atmosphere, but we cannot rule them out as being important in the marine environment.
Laura Heimsch, Annalea Lohila, Juha-Pekka Tuovinen, Henriikka Vekuri, Jussi Heinonsalo, Olli Nevalainen, Mika Korkiakoski, Jari Liski, Tuomas Laurila, and Liisa Kulmala
Biogeosciences, 18, 3467–3483, https://doi.org/10.5194/bg-18-3467-2021, https://doi.org/10.5194/bg-18-3467-2021, 2021
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CO2 and H2O fluxes were measured at a newly established eddy covariance site in southern Finland for 2 years from 2018 to 2020. This agricultural grassland site focuses on the conversion from intensive towards more sustainable agricultural management. The first summer experienced prolonged dry periods, and notably larger fluxes were observed in the second summer. The field acted as a net carbon sink during both study years.
Anteneh Getachew Mengistu, Gizaw Mengistu Tsidu, Gerbrand Koren, Maurits L. Kooreman, K. Folkert Boersma, Torbern Tagesson, Jonas Ardö, Yann Nouvellon, and Wouter Peters
Biogeosciences, 18, 2843–2857, https://doi.org/10.5194/bg-18-2843-2021, https://doi.org/10.5194/bg-18-2843-2021, 2021
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In this study, we assess the usefulness of Sun-Induced Fluorescence of Terrestrial Ecosystems Retrieval (SIFTER) data from the GOME-2A instrument and near-infrared reflectance of vegetation (NIRv) from MODIS to capture the seasonality and magnitudes of gross primary production (GPP) derived from six eddy-covariance flux towers in Africa in the overlap years between 2007–2014. We also test the robustness of sun-induced fluoresence and NIRv to compare the seasonality of GPP for the major biomes.
Robbie Ramsay, Chiara F. Di Marco, Mathew R. Heal, Matthias Sörgel, Paulo Artaxo, Meinrat O. Andreae, and Eiko Nemitz
Biogeosciences, 18, 2809–2825, https://doi.org/10.5194/bg-18-2809-2021, https://doi.org/10.5194/bg-18-2809-2021, 2021
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The exchange of the gas ammonia between the atmosphere and the surface is an important biogeochemical process, but little is known of this exchange for certain ecosystems, such as the Amazon rainforest. This study took measurements of ammonia exchange over an Amazon rainforest site and subsequently modelled the observed deposition and emission patterns. We observed emissions of ammonia from the rainforest, which can be simulated accurately by using a canopy resistance modelling approach.
Gemma Purser, Julia Drewer, Mathew R. Heal, Robert A. S. Sircus, Lara K. Dunn, and James I. L. Morison
Biogeosciences, 18, 2487–2510, https://doi.org/10.5194/bg-18-2487-2021, https://doi.org/10.5194/bg-18-2487-2021, 2021
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Short-rotation forest plantations could help reduce greenhouse gases but can emit biogenic volatile organic compounds. Emissions were measured at a plantation trial in Scotland. Standardised emissions of isoprene from foliage were higher from hybrid aspen than from Sitka spruce and low from Italian alder. Emissions of total monoterpene were lower. The forest floor was only a small source. Model estimates suggest an SRF expansion of 0.7 Mha could increase total UK emissions between < 1 %–35 %.
Daniel Diaz-de-Quijano, Aleksander Vladimirovich Ageev, Elena Anatolevna Ivanova, and Olesia Valerevna Anishchenko
Biogeosciences, 18, 1601–1618, https://doi.org/10.5194/bg-18-1601-2021, https://doi.org/10.5194/bg-18-1601-2021, 2021
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Winter atmospheric nitrogen (N) and phosphorus (P) depositions were measured for the first time in the Western Sayan Mountains (Siberia). The low and very low atmospheric N and P depositions could be responsible for the observed lake phytoplankton N–P colimitation. We hypothesize that slight imbalances in the nutrient deposition, as expected in the context of global change (climate, forest fires and anthropogenic nitrogen emissions), could have important effects on the ecology of these lakes.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
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The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Philipp A. Nauer, Eleonora Chiri, Thanavit Jirapanjawat, Chris Greening, and Perran L. M. Cook
Biogeosciences, 18, 729–737, https://doi.org/10.5194/bg-18-729-2021, https://doi.org/10.5194/bg-18-729-2021, 2021
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Hydrogen (H2) and carbon monoxide (CO) are atmospheric trace gases cycled via microbial metabolisms. We observed strong H2 and CO contamination from rubber septa used to seal common gas sample storage vials. Here we propose a simple and inexpensive modification of such vials to allow reliable storage of H2, CO and methane trace-gas samples for timescales of weeks to months, thus enabling extensive field campaigns to investigate H2 and CO biogeochemistry in remote areas.
Jize Jiang, David S. Stevenson, Aimable Uwizeye, Giuseppe Tempio, and Mark A. Sutton
Biogeosciences, 18, 135–158, https://doi.org/10.5194/bg-18-135-2021, https://doi.org/10.5194/bg-18-135-2021, 2021
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Ammonia is a key water and air pollutant and impacts human health and climate change. Ammonia emissions mainly originate from agriculture. We find that chicken agriculture contributes to large ammonia emissions, especially in hot and wet regions. These emissions can be greatly affected by the local environment, i.e. temperature and humidity, and also by human management. We develop a model that suggests ammonia emissions from chicken farming are likely to increase under a warming climate.
Richard Wehr and Scott R. Saleska
Biogeosciences, 18, 13–24, https://doi.org/10.5194/bg-18-13-2021, https://doi.org/10.5194/bg-18-13-2021, 2021
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Water and carbon exchange between plants and the atmosphere is governed by stomata: adjustable pores in the surfaces of leaves. The combined gas conductance of all the stomata in a canopy has long been estimated using an equation that is shown here to be systematically incorrect because it relies on measurements that are generally inadequate. An alternative approach is shown to be more accurate in all probable scenarios and to imply different responses of stomatal conductance to the environment.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Yayi Niu, Yuqiang Li, Hanbo Yun, Xuyang Wang, Xiangwen Gong, Yulong Duan, and Jing Liu
Biogeosciences, 17, 6309–6326, https://doi.org/10.5194/bg-17-6309-2020, https://doi.org/10.5194/bg-17-6309-2020, 2020
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We report the results from continuous year-round CO2 observations from a sandy grassland in the Horqin Sandy Land using the eddy covariance technique. To quantify the diurnal, seasonal, and annual variation in net ecosystem CO2 exchange, gross primary productivity, and ecosystem respiration and to identify the different scales of environmental factors and the underlying mechanisms, we also explored how the annual precipitation affects the net ecosystem CO2 exchange and its components.
Hélène Angot, Katelyn McErlean, Lu Hu, Dylan B. Millet, Jacques Hueber, Kaixin Cui, Jacob Moss, Catherine Wielgasz, Tyler Milligan, Damien Ketcherside, M. Syndonia Bret-Harte, and Detlev Helmig
Biogeosciences, 17, 6219–6236, https://doi.org/10.5194/bg-17-6219-2020, https://doi.org/10.5194/bg-17-6219-2020, 2020
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We report biogenic volatile organic compounds (BVOCs) ambient levels and emission rates from key vegetation species in the Alaskan arctic tundra, providing a new data set to further constrain isoprene chemistry under low NOx conditions in models. We add to the growing body of evidence that climate-induced changes in the vegetation composition will significantly affect the BVOC emission potential of the tundra, with implications for atmospheric oxidation processes and climate feedbacks.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina Ruscica, Boris Sakschewski, Anna Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-425, https://doi.org/10.5194/bg-2020-425, 2020
Revised manuscript accepted for BG
Teresa M. Seifried, Paul Bieber, Laura Felgitsch, Julian Vlasich, Florian Reyzek, David G. Schmale III, and Hinrich Grothe
Biogeosciences, 17, 5655–5667, https://doi.org/10.5194/bg-17-5655-2020, https://doi.org/10.5194/bg-17-5655-2020, 2020
Dario Papale
Biogeosciences, 17, 5587–5598, https://doi.org/10.5194/bg-17-5587-2020, https://doi.org/10.5194/bg-17-5587-2020, 2020
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FLUXNET is a large, bottom-up, self-coordinated network of sites. It provided ecosystem–atmosphere greenhouse gas fluxes from stations around the world that were used as bases for a large number of publications and studies. Today many applications require recent updates on the data to track more closely the ecosystem responses to climate change and link ground data with satellite programs. For this reason, a new organization of FLUXNET is needed, keeping as its target the FAIR principles.
Christian Markwitz, Alexander Knohl, and Lukas Siebicke
Biogeosciences, 17, 5183–5208, https://doi.org/10.5194/bg-17-5183-2020, https://doi.org/10.5194/bg-17-5183-2020, 2020
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Agroforestry has been shown to alter the microclimate and to lead to higher carbon sequestration above ground and in the soil. In this study, we investigated the impact of agroforestry systems on system-scale evapotranspiration (ET) due to concerns about increased water losses to the atmosphere. Results showed small differences in annual sums of ET over agroforestry relative to monoculture systems, indicating that agroforestry in Germany can be a land use alternative to monoculture agriculture.
Arnaud P. Praplan, Toni Tykkä, Simon Schallhart, Virpi Tarvainen, Jaana Bäck, and Heidi Hellén
Biogeosciences, 17, 4681–4705, https://doi.org/10.5194/bg-17-4681-2020, https://doi.org/10.5194/bg-17-4681-2020, 2020
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In this paper, we study emissions of volatile organic compounds (VOCs) from three boreal tree species. Individual compounds are quantified with on-line separation analytical techniques, while the total reactivity of the emissions is measured using a custom-built instrument. On some occasions, in particular when the trees suffer from stress, the total reactivity measured is higher than the sum of the reactivity of individual compounds. This indicates that the threes emit VOCs that remain unknown.
June Skeeter, Andreas Christen, Andrée-Anne Laforce, Elyn Humphreys, and Greg Henry
Biogeosciences, 17, 4421–4441, https://doi.org/10.5194/bg-17-4421-2020, https://doi.org/10.5194/bg-17-4421-2020, 2020
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This study investigates carbon fluxes at Illisarvik, an artificial drained thermokarst lake basin (DTLB) in Canada's Northwest Territories. This is the first carbon balance study in a DTLB outside of Alaska. We used neural networks to identify the factors controlling fluxes and to model the effects of the controlling factors. We discuss the role of vegetation heterogeneity in fluxes, especially of methane, and we show how the carbon fluxes differ from Alaskan DTLBs.
Anne J. Hoek van Dijke, Kaniska Mallick, Martin Schlerf, Miriam Machwitz, Martin Herold, and Adriaan J. Teuling
Biogeosciences, 17, 4443–4457, https://doi.org/10.5194/bg-17-4443-2020, https://doi.org/10.5194/bg-17-4443-2020, 2020
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We investigated the link between the vegetation leaf area index (LAI) and the land–atmosphere exchange of water, energy, and carbon fluxes. We show that the correlation between the LAI and water and energy fluxes depends on the vegetation type and aridity. For carbon fluxes, however, the correlation with the LAI was strong and independent of vegetation and aridity. This study provides insight into when the vegetation LAI can be used to model or extrapolate land–atmosphere fluxes.
Jordi Vilà-Guerau de Arellano, Patrizia Ney, Oscar Hartogensis, Hugo de Boer, Kevin van Diepen, Dzhaner Emin, Geiske de Groot, Anne Klosterhalfen, Matthias Langensiepen, Maria Matveeva, Gabriela Miranda-García, Arnold F. Moene, Uwe Rascher, Thomas Röckmann, Getachew Adnew, Nicolas Brüggemann, Youri Rothfuss, and Alexander Graf
Biogeosciences, 17, 4375–4404, https://doi.org/10.5194/bg-17-4375-2020, https://doi.org/10.5194/bg-17-4375-2020, 2020
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The CloudRoots field experiment has obtained an open comprehensive observational data set that includes soil, plant, and atmospheric variables to investigate the interactions between a heterogeneous land surface and its overlying atmospheric boundary layer, including the rapid perturbations of clouds in evapotranspiration. Our findings demonstrate that in order to understand and represent diurnal variability, we need to measure and model processes from the leaf to the landscape scales.
Dean Howard, Yannick Agnan, Detlev Helmig, Yu Yang, and Daniel Obrist
Biogeosciences, 17, 4025–4042, https://doi.org/10.5194/bg-17-4025-2020, https://doi.org/10.5194/bg-17-4025-2020, 2020
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The Arctic tundra represents a vast store of carbon that may be broken down by microbial activity into greenhouse gases such as CO2 and CH4. Though microbes are less active in winter, the long duration of the cold season makes this period very important for carbon cycling. We show that, under conditions of warmer winter air temperatures and greater snowfall, deeper soils can remain warm enough to sustain significantly enhanced CH4 emission. This could have large implications for future climates.
Kristina Bohm, Joachim Ingwersen, Josipa Milovac, and Thilo Streck
Biogeosciences, 17, 2791–2805, https://doi.org/10.5194/bg-17-2791-2020, https://doi.org/10.5194/bg-17-2791-2020, 2020
Domenico Vitale, Gerardo Fratini, Massimo Bilancia, Giacomo Nicolini, Simone Sabbatini, and Dario Papale
Biogeosciences, 17, 1367–1391, https://doi.org/10.5194/bg-17-1367-2020, https://doi.org/10.5194/bg-17-1367-2020, 2020
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This work describes a data cleaning procedure for the detection of eddy covariance fluxes affected by systematic errors. We believe that the proposed procedure can serve as a basis toward a unified quality control strategy suitable for the centralized data processing pipelines, where the use of completely data-driven and scalable procedures that guarantee high-quality standards and reproducibility of the released products constitutes an essential prerequisite.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Samantha J. Basile, Xin Lin, William R. Wieder, Melannie D. Hartman, and Gretchen Keppel-Aleks
Biogeosciences, 17, 1293–1308, https://doi.org/10.5194/bg-17-1293-2020, https://doi.org/10.5194/bg-17-1293-2020, 2020
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Soil heterotrophic respiration (HR) is an important component of land–atmosphere carbon exchange but is difficult to observe globally. We analyzed the imprint that this flux leaves on atmospheric CO2 using a set of simulations from HR models with common inputs. Models that represent microbial processes are more variable and have stronger temperature sensitivity than those that do not. Our results show that we can use atmospheric CO2 observations to evaluate and improve models of HR.
Christopher Krich, Jakob Runge, Diego G. Miralles, Mirco Migliavacca, Oscar Perez-Priego, Tarek El-Madany, Arnaud Carrara, and Miguel D. Mahecha
Biogeosciences, 17, 1033–1061, https://doi.org/10.5194/bg-17-1033-2020, https://doi.org/10.5194/bg-17-1033-2020, 2020
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Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 17, 405–422, https://doi.org/10.5194/bg-17-405-2020, https://doi.org/10.5194/bg-17-405-2020, 2020
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We present the highest resolution solar-induced chlorophyll fluorescence (SIF) dataset from satellite measurements, providing previously unobservable phenomena related to plant photosynthesis. We find a strong correspondence between TROPOMI SIF and AmeriFlux GPP. We then observe a double peak in the seasonality of California's photosynthesis, not seen by traditional vegetation indices (e.g., MODIS). This is further corroborated by EOF/PC analysis.
Nicholas Cowan, Peter Levy, Andrea Moring, Ivan Simmons, Colin Bache, Amy Stephens, Joana Marinheiro, Jocelyn Brichet, Ling Song, Amy Pickard, Connie McNeill, Roseanne McDonald, Juliette Maire, Benjamin Loubet, Polina Voylokov, Mark Sutton, and Ute Skiba
Biogeosciences, 16, 4731–4745, https://doi.org/10.5194/bg-16-4731-2019, https://doi.org/10.5194/bg-16-4731-2019, 2019
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Commonly used nitrogen fertilisers, ammonium nitrate, urea and urea coated with a urease inhibitor, were applied to experimental plots. Fertilisation with ammonium nitrate supported the largest yields but also resulted in the largest nitrous oxide emissions. Urea was the largest emitter of ammonia. The coated urea did not significantly increase yields; however, ammonia emissions were substantially smaller than urea. The coated urea was the best environmentally but is economically unattractive.
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Short summary
Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Causal structure discovery algorithms have been making headway into Earth system sciences, and...
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