Articles | Volume 11, issue 13
https://doi.org/10.5194/bg-11-3477-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue:
https://doi.org/10.5194/bg-11-3477-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
02 Jul 2014
Research article |
| 02 Jul 2014
Can a bog drained for forestry be a stronger carbon sink than a natural bog forest?
J. Hommeltenberg
Karlsruhe Institute of Technology KIT, Institute of Meteorology and Climate Research IMK-IFU, Kreuzeckbahnstrasse 19, 82467 Garmisch-Partenkirchen Germany
Technical University of Munich, Chair of Atmospheric Environmental Research, Hans-Carl-von-Carlowitz-Platz 2/I, 85354 Freising, Germany
H. P. Schmid
Karlsruhe Institute of Technology KIT, Institute of Meteorology and Climate Research IMK-IFU, Kreuzeckbahnstrasse 19, 82467 Garmisch-Partenkirchen Germany
Technical University of Munich, Chair of Atmospheric Environmental Research, Hans-Carl-von-Carlowitz-Platz 2/I, 85354 Freising, Germany
M. Drösler
University of Applied Sciences Weihenstephan-Triesdorf, Chair of Vegetation-Ecology, Weihenstephaner Berg 4, 85354 Freising, Germany
P. Werle
Karlsruhe Institute of Technology KIT, Institute of Meteorology and Climate Research IMK-IFU, Kreuzeckbahnstrasse 19, 82467 Garmisch-Partenkirchen Germany
Related authors
No articles found.
Olli Peltola, Timo Vesala, Yao Gao, Olle Räty, Pavel Alekseychik, Mika Aurela, Bogdan Chojnicki, Ankur R. Desai, Albertus J. Dolman, Eugenie S. Euskirchen, Thomas Friborg, Mathias Göckede, Manuel Helbig, Elyn Humphreys, Robert B. Jackson, Georg Jocher, Fortunat Joos, Janina Klatt, Sara H. Knox, Natalia Kowalska, Lars Kutzbach, Sebastian Lienert, Annalea Lohila, Ivan Mammarella, Daniel F. Nadeau, Mats B. Nilsson, Walter C. Oechel, Matthias Peichl, Thomas Pypker, William Quinton, Janne Rinne, Torsten Sachs, Mateusz Samson, Hans Peter Schmid, Oliver Sonnentag, Christian Wille, Donatella Zona, and Tuula Aalto
Earth Syst. Sci. Data, 11, 1263–1289, https://doi.org/10.5194/essd-11-1263-2019, https://doi.org/10.5194/essd-11-1263-2019, 2019
Short summary
Short summary
Here we develop a monthly gridded dataset of northern (> 45 N) wetland methane (CH4) emissions. The data product is derived using a random forest machine-learning technique and eddy covariance CH4 fluxes from 25 wetland sites. Annual CH4 emissions from these wetlands calculated from the derived data product are comparable to prior studies focusing on these areas. This product is an independent estimate of northern wetland CH4 emissions and hence could be used, e.g. for process model evaluation.
Chunjing Qiu, Dan Zhu, Philippe Ciais, Bertrand Guenet, Gerhard Krinner, Shushi Peng, Mika Aurela, Christian Bernhofer, Christian Brümmer, Syndonia Bret-Harte, Housen Chu, Jiquan Chen, Ankur R. Desai, Jiří Dušek, Eugénie S. Euskirchen, Krzysztof Fortuniak, Lawrence B. Flanagan, Thomas Friborg, Mateusz Grygoruk, Sébastien Gogo, Thomas Grünwald, Birger U. Hansen, David Holl, Elyn Humphreys, Miriam Hurkuck, Gerard Kiely, Janina Klatt, Lars Kutzbach, Chloé Largeron, Fatima Laggoun-Défarge, Magnus Lund, Peter M. Lafleur, Xuefei Li, Ivan Mammarella, Lutz Merbold, Mats B. Nilsson, Janusz Olejnik, Mikaell Ottosson-Löfvenius, Walter Oechel, Frans-Jan W. Parmentier, Matthias Peichl, Norbert Pirk, Olli Peltola, Włodzimierz Pawlak, Daniel Rasse, Janne Rinne, Gaius Shaver, Hans Peter Schmid, Matteo Sottocornola, Rainer Steinbrecher, Torsten Sachs, Marek Urbaniak, Donatella Zona, and Klaudia Ziemblinska
Geosci. Model Dev., 11, 497–519, https://doi.org/10.5194/gmd-11-497-2018, https://doi.org/10.5194/gmd-11-497-2018, 2018
Short summary
Short summary
Northern peatlands store large amount of soil carbon and are vulnerable to climate change. We implemented peatland hydrological and carbon accumulation processes into the ORCHIDEE land surface model. The model was evaluated against EC measurements from 30 northern peatland sites. The model generally well reproduced the spatial gradient and temporal variations in GPP and NEE at these sites. Water table depth was not well predicted but had only small influence on simulated NEE.
N. Kljun, P. Calanca, M. W. Rotach, and H. P. Schmid
Geosci. Model Dev., 8, 3695–3713, https://doi.org/10.5194/gmd-8-3695-2015, https://doi.org/10.5194/gmd-8-3695-2015, 2015
Short summary
Short summary
Flux footprint models describe the surface area of influence of a flux measurement. They are used for designing flux tower sites, and for interpretation of flux measurements. The two-dimensional footprint parameterisation (FFP) presented here is suitable for processing large data sets, and, unlike other fast footprint models, FFP is applicable to daytime or night-time measurements, fluxes from short masts over grassland to tall towers over mature forests, and even to airborne flux measurements.
T. Eickenscheidt, J. Heinichen, and M. Drösler
Biogeosciences, 12, 5161–5184, https://doi.org/10.5194/bg-12-5161-2015, https://doi.org/10.5194/bg-12-5161-2015, 2015
C. Metzger, P.-E. Jansson, A. Lohila, M. Aurela, T. Eickenscheidt, L. Belelli-Marchesini, K. J. Dinsmore, J. Drewer, J. van Huissteden, and M. Drösler
Biogeosciences, 12, 125–146, https://doi.org/10.5194/bg-12-125-2015, https://doi.org/10.5194/bg-12-125-2015, 2015
Short summary
Short summary
To identify site specific differences in CO2-related processes in open peatlands, we calibrated a process oriented model to fit to detailed measurements of carbon fluxes and compared the resulting parameter ranges between the sites. For most processes a common configuration could be applied. Site specific differences were identified for soil respiration coefficients, plant radiation-use efficiencies and plant storage fractions for spring regrowth.
T. Leppelt, R. Dechow, S. Gebbert, A. Freibauer, A. Lohila, J. Augustin, M. Drösler, S. Fiedler, S. Glatzel, H. Höper, J. Järveoja, P. E. Lærke, M. Maljanen, Ü. Mander, P. Mäkiranta, K. Minkkinen, P. Ojanen, K. Regina, and M. Strömgren
Biogeosciences, 11, 6595–6612, https://doi.org/10.5194/bg-11-6595-2014, https://doi.org/10.5194/bg-11-6595-2014, 2014
T. Eickenscheidt, A. Freibauer, J. Heinichen, J. Augustin, and M. Drösler
Biogeosciences, 11, 6187–6207, https://doi.org/10.5194/bg-11-6187-2014, https://doi.org/10.5194/bg-11-6187-2014, 2014
T. Eickenscheidt, J. Heinichen, J. Augustin, A. Freibauer, and M. Drösler
Biogeosciences, 11, 2961–2976, https://doi.org/10.5194/bg-11-2961-2014, https://doi.org/10.5194/bg-11-2961-2014, 2014
S. Metzger, W. Junkermann, M. Mauder, K. Butterbach-Bahl, B. Trancón y Widemann, F. Neidl, K. Schäfer, S. Wieneke, X. H. Zheng, H. P. Schmid, and T. Foken
Biogeosciences, 10, 2193–2217, https://doi.org/10.5194/bg-10-2193-2013, https://doi.org/10.5194/bg-10-2193-2013, 2013
Related subject area
Biogeochemistry: Air - Land Exchange
Monitoring cropland daily carbon dioxide exchange at field scales with Sentinel-2 satellite imagery
Compound soil and atmospheric drought (CSAD) events and CO2 fluxes of a mixed deciduous forest: the occurrence, impact, and temporal contribution of main drivers
The influence of plant water stress on vegetation–atmosphere exchanges: implications for ozone modelling
High interspecific variability in ice nucleation activity suggests pollen ice nucleators are incidental
Using automated machine learning for the upscaling of gross primary productivity
Interpretability of negative latent heat fluxes from eddy covariance measurements in dry conditions
Forest-floor respiration, N2O fluxes, and CH4 fluxes in a subalpine spruce forest: drivers and annual budgets
Impact of meteorological conditions on BVOC emission rate from Eastern Mediterranean vegetation under drought
Enhanced net CO2 exchange of a semideciduous forest in the southern Amazon due to diffuse radiation from biomass burning
Observational relationships between ammonia, carbon dioxide and water vapor under a wide range of meteorological and turbulent conditions: RITA-2021 campaign
Environmental controls of winter soil carbon dioxide fluxes in boreal and tundra environments
Origin of secondary fatty alcohols in atmospheric aerosols in a cool–temperate forest based on their mass size distributions
Sap flow and leaf gas exchange response to a drought and heatwave in urban green spaces in a Nordic city
Changes in biogenic volatile organic compound emissions in response to the El Niño–Southern Oscillation
Rethinking the deployment of static chambers for CO2 flux measurement in dry desert soils
Lichen species across Alaska produce highly active and stable ice nucleators
A differentiable, physics-informed ecosystem modeling and learning framework for large-scale inverse problems: demonstration with photosynthesis simulations
Snow–vegetation–atmosphere interactions in alpine tundra
Synergy between TROPOMI sun-induced chlorophyll fluorescence and MODIS spectral reflectance for understanding the dynamics of gross primary productivity at Integrated Carbon Observatory System (ICOS) ecosystem flux sites
Atmospheric deposition of reactive nitrogen to a deciduous forest in the southern Appalachian Mountains
Tropical cyclones facilitate recovery of forest leaf area from dry spells in East Asia
Minor contributions of daytime monoterpenes are major contributors to atmospheric reactivity
Using atmospheric observations to quantify annual biogenic carbon dioxide fluxes on the Alaska North Slope
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part II: Modeling annual budgets
Growth and actual leaf temperature modulate CO2 responsiveness of monoterpene emissions from holm oak in opposite ways
Multi-year observations reveal a larger than expected autumn respiration signal across northeast Eurasia
Reviews and syntheses: VOC emissions from soil cover in boreal and temperate natural ecosystems of the Northern Hemisphere
Internal tree cycling and atmospheric archiving of mercury: examination with concentration and stable isotope analyses
Contrasting drought legacy effects on gross primary productivity in a mixed versus pure beech forest
CO2 and CH4 exchanges between moist moss tundra and atmosphere on Kapp Linné, Svalbard
Recent extreme drought events in the Amazon rainforest: assessment of different precipitation and evapotranspiration datasets and drought indicators
Variability and uncertainty in flux-site-scale net ecosystem exchange simulations based on machine learning and remote sensing: a systematic evaluation
Update of a biogeochemical model with process-based algorithms to predict ammonia volatilization from fertilized cultivated uplands and rice paddy fields
Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment
Climatic variation drives loss and restructuring of carbon and nitrogen in boreal forest wildfire
Gaps in network infrastructure limit our understanding of biogenic methane emissions for the United States
Changes of the aerodynamic characteristics of a flux site after an extensive windthrow
Carbon sequestration potential of street tree plantings in Helsinki
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Sensitivity of biomass burning emissions estimates to land surface information
A convolutional neural network for spatial downscaling of satellite-based solar-induced chlorophyll fluorescence (SIFnet)
Influence of plant ecophysiology on ozone dry deposition: comparing between multiplicative and photosynthesis-based dry deposition schemes and their responses to rising CO2 level
Modeling the interinfluence of fertilizer-induced NH3 emission, nitrogen deposition, and aerosol radiative effects using modified CESM2
Physiological and climate controls on foliar mercury uptake by European tree species
Radiation, soil water content, and temperature effects on carbon cycling in an alpine swamp meadow of the northeastern Qinghai–Tibetan Plateau
Representativeness assessment of the pan-Arctic eddy covariance site network and optimized future enhancements
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part I: Measuring temporal dynamics
Ideas and perspectives: Emerging contours of a dynamic exogenous kerogen cycle
Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection
On the impact of canopy model complexity on simulated carbon, water, and solar-induced chlorophyll fluorescence fluxes
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
Biogeosciences, 21, 3593–3616, https://doi.org/10.5194/bg-21-3593-2024, https://doi.org/10.5194/bg-21-3593-2024, 2024
Short summary
Short summary
To improve the accuracy of spatial carbon exchange estimates, we evaluated simple linear models for net ecosystem exchange (NEE) and gross primary productivity (GPP) and how they can be used to upscale the CO2 exchange of agricultural fields. The models are solely driven by Sentinel-2-derived vegetation indices (VIs). Evaluations show that different VIs have variable power to estimate NEE and GPP of crops in different years. The overall performance is as good as results from complex crop models.
Liliana Scapucci, Ankit Shekhar, Sergio Aranda-Barranco, Anastasiia Bolshakova, Lukas Hörtnagl, Mana Gharun, and Nina Buchmann
Biogeosciences, 21, 3571–3592, https://doi.org/10.5194/bg-21-3571-2024, https://doi.org/10.5194/bg-21-3571-2024, 2024
Short summary
Short summary
Forests face increased exposure to “compound soil and atmospheric drought” (CSAD) events due to global warming. We examined the impacts and drivers of CO2 fluxes during CSAD events at multiple layers of a deciduous forest over 18 years. Results showed reduced net ecosystem productivity and forest-floor respiration during CSAD events, mainly driven by soil and atmospheric drought. This unpredictability in forest CO2 fluxes jeopardises reforestation projects aimed at mitigating CO2 emissions.
Tamara Emmerichs, Yen-Sen Lu, and Domenico Taraborrelli
Biogeosciences, 21, 3251–3269, https://doi.org/10.5194/bg-21-3251-2024, https://doi.org/10.5194/bg-21-3251-2024, 2024
Short summary
Short summary
We assess the representation of the plant response to surface water in a global atmospheric chemistry model. This sensitivity is crucial for the return of precipitation back into the atmosphere and thus significantly impacts the representation of weather as well as air quality. The newly implemented response function reduces this process and has a better comparison with satellite observations. This yields a higher intensity of unusual warm periods and higher production of air pollutants.
Nina L. H. Kinney, Charles A. Hepburn, Matthew I. Gibson, Daniel Ballesteros, and Thomas F. Whale
Biogeosciences, 21, 3201–3214, https://doi.org/10.5194/bg-21-3201-2024, https://doi.org/10.5194/bg-21-3201-2024, 2024
Short summary
Short summary
Molecules released from plant pollen induce the formation of ice from supercooled water at temperatures warm enough to suggest an underlying function for this activity. In this study we show that ice nucleators are ubiquitous in pollen. We suggest the molecules responsible fulfil some unrelated biological function and nucleate ice incidentally. The ubiquity of ice-nucleating molecules in pollen and particularly active examples reveal a greater potential for pollen to impact weather and climate.
Max Gaber, Yanghui Kang, Guy Schurgers, and Trevor Keenan
Biogeosciences, 21, 2447–2472, https://doi.org/10.5194/bg-21-2447-2024, https://doi.org/10.5194/bg-21-2447-2024, 2024
Short summary
Short summary
Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays a vital role in the carbon cycle. We can measure GPP locally, but producing larger and continuous estimates is challenging. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
Short summary
Short summary
Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Luana Krebs, Susanne Burri, Iris Feigenwinter, Mana Gharun, Philip Meier, and Nina Buchmann
Biogeosciences, 21, 2005–2028, https://doi.org/10.5194/bg-21-2005-2024, https://doi.org/10.5194/bg-21-2005-2024, 2024
Short summary
Short summary
This study explores year-round forest-floor greenhouse gas (GHG) fluxes in a Swiss spruce forest. Soil temperature and snow depth affected forest-floor respiration, while CH4 uptake was linked to snow cover. Negligible N2O fluxes were observed. In 2022, a warm year, CO2 emissions notably increased. The study suggests rising forest-floor GHG emissions due to climate change, impacting carbon sink behavior. Thus, for future forest management, continuous year-round GHG flux measurements are crucial.
Qian Li, Gil Lerner, Einat Bar, Efraim Lewinsohn, and Eran Tas
EGUsphere, https://doi.org/10.5194/egusphere-2024-529, https://doi.org/10.5194/egusphere-2024-529, 2024
Short summary
Short summary
Our research indicates that instantaneous changes in meteorological parameters better reflect drought-induced changes in the emission rates of biogenic volatile organic compounds (BVOCs) from natural vegetation than their absolute values. Additionally, even a small precipitation amount triggered a significant increase in BVOC emissions. These findings highlight the intricate BVOC emission-drought relationship and are crucial for advancing our understanding of BVOCs emission under climate change.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
Short summary
Short summary
The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Ruben B. Schulte, Jordi Vilà-Guerau de Arellano, Susanna Rutledge-Jonker, Shelley van der Graaf, Jun Zhang, and Margreet C. van Zanten
Biogeosciences, 21, 557–574, https://doi.org/10.5194/bg-21-557-2024, https://doi.org/10.5194/bg-21-557-2024, 2024
Short summary
Short summary
We analyzed measurements with the aim of finding relations between the surface atmosphere exchange of NH3 and the CO2 uptake and transpiration by vegetation. We found a high correlation of daytime NH3 emissions with both latent heat flux and photosynthetically active radiation. Very few simultaneous measurements of NH3, CO2 fluxes and meteorological variables exist at sub-diurnal timescales. This study paves the way to finding more robust relations between the NH3 exchange flux and CO2 uptake.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Carolina Voigt, Nick Rutter, Paul Mann, Jean-Daniel Sylvain, and Alexandre Roy
Biogeosciences, 20, 5087–5108, https://doi.org/10.5194/bg-20-5087-2023, https://doi.org/10.5194/bg-20-5087-2023, 2023
Short summary
Short summary
We present an analysis of soil CO2 emissions in boreal and tundra regions during the non-growing season. We show that when the soil is completely frozen, soil temperature is the main control on CO2 emissions. When the soil is around the freezing point, with a mix of liquid water and ice, the liquid water content is the main control on CO2 emissions. This study highlights that the vegetation–snow–soil interactions must be considered to understand soil CO2 emissions during the non-growing season.
Yuhao Cui, Eri Tachibana, Kimitaka Kawamura, and Yuzo Miyazaki
Biogeosciences, 20, 4969–4980, https://doi.org/10.5194/bg-20-4969-2023, https://doi.org/10.5194/bg-20-4969-2023, 2023
Short summary
Short summary
Fatty alcohols (FAs) are major components of surface lipids in plant leaves and serve as surface-active aerosols. Our study on the aerosol size distributions in a forest suggests that secondary FAs (SFAs) originated from plant waxes and that leaf senescence status is likely an important factor controlling the size distribution of SFAs. This study provides new insights into the sources of primary biological aerosol particles (PBAPs) and their effects on the aerosol ice nucleation activity.
Joyson Ahongshangbam, Liisa Kulmala, Jesse Soininen, Yasmin Frühauf, Esko Karvinen, Yann Salmon, Anna Lintunen, Anni Karvonen, and Leena Järvi
Biogeosciences, 20, 4455–4475, https://doi.org/10.5194/bg-20-4455-2023, https://doi.org/10.5194/bg-20-4455-2023, 2023
Short summary
Short summary
Urban vegetation is important for removing urban CO2 emissions and cooling. We studied the response of urban trees' functions (photosynthesis and transpiration) to a heatwave and drought at four urban green areas in the city of Helsinki. We found that tree water use was increased during heatwave and drought periods, but there was no change in the photosynthesis rates. The heat and drought conditions were severe at the local scale but were not excessive enough to restrict urban trees' functions.
Ryan Vella, Andrea Pozzer, Matthew Forrest, Jos Lelieveld, Thomas Hickler, and Holger Tost
Biogeosciences, 20, 4391–4412, https://doi.org/10.5194/bg-20-4391-2023, https://doi.org/10.5194/bg-20-4391-2023, 2023
Short summary
Short summary
We investigated the effect of the El Niño–Southern Oscillation (ENSO) on biogenic volatile organic compound (BVOC) emissions from plants. ENSO events can cause a significant increase in these emissions, which have a long-term impact on the Earth's atmosphere. Persistent ENSO conditions can cause long-term changes in vegetation, resulting in even higher BVOC emissions. We link ENSO-induced emission anomalies with driving atmospheric and vegetational variables.
Nadav Bekin and Nurit Agam
Biogeosciences, 20, 3791–3802, https://doi.org/10.5194/bg-20-3791-2023, https://doi.org/10.5194/bg-20-3791-2023, 2023
Short summary
Short summary
The mechanisms of soil CO2 flux in dry desert soils are not fully understood. Yet studies conducted in desert ecosystems rarely discuss potential errors related to using the commonly used flux chambers in dry and bare soils. In our study, the conventional deployment practice of the chambers underestimated the instantaneous CO2 flux by up to 50 % and the total daily CO2 uptake by 35 %. This suggests that desert soils are a larger carbon sink than previously reported.
Rosemary J. Eufemio, Ingrid de Almeida Ribeiro, Todd L. Sformo, Gary A. Laursen, Valeria Molinero, Janine Fröhlich-Nowoisky, Mischa Bonn, and Konrad Meister
Biogeosciences, 20, 2805–2812, https://doi.org/10.5194/bg-20-2805-2023, https://doi.org/10.5194/bg-20-2805-2023, 2023
Short summary
Short summary
Lichens, the dominant vegetation in the Arctic, contain ice nucleators (INs) that enable freezing close to 0°C. Yet the abundance, diversity, and function of lichen INs is unknown. Our screening of lichens across Alaska reveal that most species have potent INs. We find that lichens contain two IN populations which retain activity under environmentally relevant conditions. The ubiquity and stability of lichen INs suggest that they may have considerable impacts on local atmospheric patterns.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
Short summary
Short summary
Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
Short summary
Short summary
We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Hamadou Balde, Gabriel Hmimina, Yves Goulas, Gwendal Latouche, and Kamel Soudani
Biogeosciences, 20, 1473–1490, https://doi.org/10.5194/bg-20-1473-2023, https://doi.org/10.5194/bg-20-1473-2023, 2023
Short summary
Short summary
This study focuses on the relationship between sun-induced chlorophyll fluorescence (SIF) and ecosystem gross primary productivity (GPP) across the ICOS European flux tower network. It shows that SIF, coupled with reflectance observations, explains over 80 % of the GPP variability across diverse ecosystems but fails to bring new information compared to reflectance alone at coarse spatial scales (~5 km). These findings have applications in agriculture and ecophysiological studies.
John T. Walker, Xi Chen, Zhiyong Wu, Donna Schwede, Ryan Daly, Aleksandra Djurkovic, A. Christopher Oishi, Eric Edgerton, Jesse Bash, Jennifer Knoepp, Melissa Puchalski, John Iiames, and Chelcy F. Miniat
Biogeosciences, 20, 971–995, https://doi.org/10.5194/bg-20-971-2023, https://doi.org/10.5194/bg-20-971-2023, 2023
Short summary
Short summary
Better estimates of atmospheric nitrogen (N) deposition are needed to accurately assess ecosystem risk and impacts from deposition of nutrients and acidity. Using measurements and modeling, we estimate total N deposition of 6.7 kg N ha−1 yr−1 at a forest site in the southern Appalachian Mountains, a region sensitive to atmospheric deposition. Reductions in deposition of reduced forms of N (ammonia and ammonium) will be needed to meet the lowest estimates of N critical loads for the region.
Yi-Ying Chen and Sebastiaan Luyssaert
Biogeosciences, 20, 349–363, https://doi.org/10.5194/bg-20-349-2023, https://doi.org/10.5194/bg-20-349-2023, 2023
Short summary
Short summary
Tropical cyclones are typically assumed to be associated with ecosystem damage. This study challenges this assumption and suggests that instead of reducing leaf area, cyclones in East Asia may increase leaf area by alleviating water stress.
Deborah F. McGlynn, Graham Frazier, Laura E. R. Barry, Manuel T. Lerdau, Sally E. Pusede, and Gabriel Isaacman-VanWertz
Biogeosciences, 20, 45–55, https://doi.org/10.5194/bg-20-45-2023, https://doi.org/10.5194/bg-20-45-2023, 2023
Short summary
Short summary
Using a custom-made gas chromatography flame ionization detector, 2 years of speciated hourly biogenic volatile organic compound data were collected in a forest in central Virginia. We identify diurnal and seasonal variability in the data, which is shown to impact atmospheric oxidant budgets. A comparison with emission models identified discrepancies with implications for model outcomes. We suggest increased monitoring of speciated biogenic volatile organic compounds to improve modeled results.
Luke D. Schiferl, Jennifer D. Watts, Erik J. L. Larson, Kyle A. Arndt, Sébastien C. Biraud, Eugénie S. Euskirchen, Jordan P. Goodrich, John M. Henderson, Aram Kalhori, Kathryn McKain, Marikate E. Mountain, J. William Munger, Walter C. Oechel, Colm Sweeney, Yonghong Yi, Donatella Zona, and Róisín Commane
Biogeosciences, 19, 5953–5972, https://doi.org/10.5194/bg-19-5953-2022, https://doi.org/10.5194/bg-19-5953-2022, 2022
Short summary
Short summary
As the Arctic rapidly warms, vast stores of thawing permafrost could release carbon dioxide (CO2) into the atmosphere. We combined observations of atmospheric CO2 concentrations from aircraft and a tower with observed CO2 fluxes from tundra ecosystems and found that the Alaskan North Slope in not a consistent source nor sink of CO2. Our study shows the importance of using both site-level and atmospheric measurements to constrain regional net CO2 fluxes and improve biogenic processes in models.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, Richard Kranenburg, and Christian Brümmer
Biogeosciences, 19, 5287–5311, https://doi.org/10.5194/bg-19-5287-2022, https://doi.org/10.5194/bg-19-5287-2022, 2022
Short summary
Short summary
For the first time, we compared four methods for estimating the annual dry deposition of total reactive nitrogen into a low-polluted forest ecosystem. In our analysis, we used 2.5 years of flux measurements, an in situ modeling approach, a large-scale chemical transport model (CTM), and canopy budget models. Annual nitrogen dry deposition budgets ranged between 4.3 and 6.7 kg N ha−1 a−1, depending on the applied method.
Michael Staudt, Juliane Daussy, Joseph Ingabire, and Nafissa Dehimeche
Biogeosciences, 19, 4945–4963, https://doi.org/10.5194/bg-19-4945-2022, https://doi.org/10.5194/bg-19-4945-2022, 2022
Short summary
Short summary
We studied the short- and long-term effects of CO2 as a function of temperature on monoterpene emissions from holm oak. Similarly to isoprene, emissions decreased non-linearly with increasing CO2, with no differences among compounds and chemotypes. The CO2 response was modulated by actual leaf and growth temperature but not by growth CO2. Estimates of annual monoterpene release under double CO2 suggest that CO2 inhibition does not offset the increase in emissions due to expected warming.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
Short summary
Short summary
Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Valery A. Isidorov and Andrej A. Zaitsev
Biogeosciences, 19, 4715–4746, https://doi.org/10.5194/bg-19-4715-2022, https://doi.org/10.5194/bg-19-4715-2022, 2022
Short summary
Short summary
Biogenic volatile organic compounds (VOCs) play a critical role in earth-system processes: they are
main playersin the formation of tropospheric O3 and secondary aerosols, which have a significant impact on climate, human health and crops. A complex mixture of VOCs, formed as a result of physicochemical and biological processes, is released into the atmosphere from the forest floor. This review presents data on the composition of VOCs and contribution of various processes to their emissions.
David S. McLagan, Harald Biester, Tomas Navrátil, Stephan M. Kraemer, and Lorenz Schwab
Biogeosciences, 19, 4415–4429, https://doi.org/10.5194/bg-19-4415-2022, https://doi.org/10.5194/bg-19-4415-2022, 2022
Short summary
Short summary
Spruce and larch trees are effective archiving species for historical atmospheric mercury using growth rings of bole wood. Mercury stable isotope analysis proved an effective tool to characterise industrial mercury signals and assess mercury uptake pathways (leaf uptake for both wood and bark) and mercury cycling within the trees. These data detail important information for understanding the mercury biogeochemical cycle particularly in forest systems.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
Short summary
Short summary
Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
Short summary
Short summary
We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
Short summary
Short summary
The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 19, 3739–3756, https://doi.org/10.5194/bg-19-3739-2022, https://doi.org/10.5194/bg-19-3739-2022, 2022
Short summary
Short summary
A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these net ecosystem exchange (NEE) simulations. Random forests and support vector machines performed better than other algorithms. Models with larger timescales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
Short summary
Short summary
The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
Short summary
Short summary
Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
Short summary
Short summary
This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
Short summary
Short summary
To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
Short summary
Short summary
This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
Short summary
Short summary
The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
Short summary
Short summary
Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Makoto Saito, Tomohiro Shiraishi, Ryuichi Hirata, Yosuke Niwa, Kazuyuki Saito, Martin Steinbacher, Doug Worthy, and Tsuneo Matsunaga
Biogeosciences, 19, 2059–2078, https://doi.org/10.5194/bg-19-2059-2022, https://doi.org/10.5194/bg-19-2059-2022, 2022
Short summary
Short summary
This study tested combinations of two sources of AGB data and two sources of LCC data and used the same burned area satellite data to estimate BB CO emissions. Our analysis showed large discrepancies in annual mean CO emissions and explicit differences in the simulated CO concentrations among the BB emissions estimates. This study has confirmed that BB emissions estimates are sensitive to the land surface information on which they are based.
Johannes Gensheimer, Alexander J. Turner, Philipp Köhler, Christian Frankenberg, and Jia Chen
Biogeosciences, 19, 1777–1793, https://doi.org/10.5194/bg-19-1777-2022, https://doi.org/10.5194/bg-19-1777-2022, 2022
Short summary
Short summary
We develop a convolutional neural network, named SIFnet, that increases the spatial resolution of SIF from TROPOMI by a factor of 10 to a spatial resolution of 0.005°. SIFnet utilizes coarse SIF observations, together with a broad range of high-resolution auxiliary data. The insights gained from interpretable machine learning techniques allow us to make quantitative claims about the relationships between SIF and other common parameters related to photosynthesis.
Shihan Sun, Amos P. K. Tai, David H. Y. Yung, Anthony Y. H. Wong, Jason A. Ducker, and Christopher D. Holmes
Biogeosciences, 19, 1753–1776, https://doi.org/10.5194/bg-19-1753-2022, https://doi.org/10.5194/bg-19-1753-2022, 2022
Short summary
Short summary
We developed and used a terrestrial biosphere model to compare and evaluate widely used empirical dry deposition schemes with different stomatal approaches and found that using photosynthesis-based stomatal approaches can reduce biases in modeled dry deposition velocities in current chemical transport models. Our study shows systematic errors in current dry deposition schemes and the importance of representing plant ecophysiological processes in models under a changing climate.
Ka Ming Fung, Maria Val Martin, and Amos P. K. Tai
Biogeosciences, 19, 1635–1655, https://doi.org/10.5194/bg-19-1635-2022, https://doi.org/10.5194/bg-19-1635-2022, 2022
Short summary
Short summary
Fertilizer-induced ammonia detrimentally affects the environment by not only directly damaging ecosystems but also indirectly altering climate and soil fertility. To quantify these secondary impacts, we enabled CESM to simulate ammonia emission, chemical evolution, and deposition as a continuous cycle. If synthetic fertilizer use is to soar by 30 % from today's level, we showed that the counteracting impacts will increase the global ammonia emission by 3.3 Tg N per year.
Lena Wohlgemuth, Pasi Rautio, Bernd Ahrends, Alexander Russ, Lars Vesterdal, Peter Waldner, Volkmar Timmermann, Nadine Eickenscheidt, Alfred Fürst, Martin Greve, Peter Roskams, Anne Thimonier, Manuel Nicolas, Anna Kowalska, Morten Ingerslev, Päivi Merilä, Sue Benham, Carmen Iacoban, Günter Hoch, Christine Alewell, and Martin Jiskra
Biogeosciences, 19, 1335–1353, https://doi.org/10.5194/bg-19-1335-2022, https://doi.org/10.5194/bg-19-1335-2022, 2022
Short summary
Short summary
Gaseous mercury is present in the atmosphere all over the globe. During the growing season, plants take up mercury from the air in a similar way as CO2. We investigated which factors impact this vegetational mercury uptake by analyzing a large dataset of leaf mercury uptake rates of trees in Europe. As a result, we conclude that mercury uptake is foremost controlled by tree-intrinsic traits like physiological activity but also by climatic factors like dry conditions in the air and in soils.
Junqi Wei, Xiaoyan Li, Lei Liu, Torben Røjle Christensen, Zhiyun Jiang, Yujun Ma, Xiuchen Wu, Hongyun Yao, and Efrén López-Blanco
Biogeosciences, 19, 861–875, https://doi.org/10.5194/bg-19-861-2022, https://doi.org/10.5194/bg-19-861-2022, 2022
Short summary
Short summary
Although water availability has been linked to the response of ecosystem carbon (C) sink–source to climate warming, the mechanisms by which C uptake responds to soil moisture remain unclear. We explored how soil water and other environmental drivers modulate net C uptake in an alpine swamp meadow. Results reveal that nearly saturated soil conditions during warm seasons can help to maintain lower ecosystem respiration and therefore enhance the C sequestration capacity in this alpine swamp meadow.
Martijn M. T. A. Pallandt, Jitendra Kumar, Marguerite Mauritz, Edward A. G. Schuur, Anna-Maria Virkkala, Gerardo Celis, Forrest M. Hoffman, and Mathias Göckede
Biogeosciences, 19, 559–583, https://doi.org/10.5194/bg-19-559-2022, https://doi.org/10.5194/bg-19-559-2022, 2022
Short summary
Short summary
Thawing of Arctic permafrost soils could trigger the release of vast amounts of carbon to the atmosphere, thus enhancing climate change. Our study investigated how well the current network of eddy covariance sites to monitor greenhouse gas exchange at local scales captures pan-Arctic flux patterns. We identified large coverage gaps, e.g., in Siberia, but also demonstrated that a targeted addition of relatively few sites can significantly improve network performance.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, and Christian Brümmer
Biogeosciences, 19, 389–413, https://doi.org/10.5194/bg-19-389-2022, https://doi.org/10.5194/bg-19-389-2022, 2022
Short summary
Short summary
Fluxes of total reactive nitrogen (∑Nr) over a low polluted forest were analyzed with regard to their temporal dynamics. Mostly deposition was observed with median fluxes ranging from −15 to −5 ng N m−2 s−1, corresponding to a range of deposition velocities from 0.2 to 0.5 cm s−1. While seasonally changing contributions of NH3 and NOx to the ∑Nr signal were found, we estimate an annual total N deposition (dry+wet) of 12.2 and 10.9 kg N ha−1 a−1 in the 2 years of observation.
Thomas M. Blattmann
Biogeosciences, 19, 359–373, https://doi.org/10.5194/bg-19-359-2022, https://doi.org/10.5194/bg-19-359-2022, 2022
Short summary
Short summary
This work enunciates the possibility of kerogen oxidation contributing to atmospheric CO2 increase in the wake of glacial episodes. This hypothesis is substantiated by several lines of independent evidence synthesized in this contribution. The author hypothesizes that the deglaciation of kerogen-rich lithologies in western Canada contributed to the characteristic deglacial increase in atmospheric CO2.
Juliana Gil-Loaiza, Joseph R. Roscioli, Joanne H. Shorter, Till H. M. Volkmann, Wei-Ren Ng, Jordan E. Krechmer, and Laura K. Meredith
Biogeosciences, 19, 165–185, https://doi.org/10.5194/bg-19-165-2022, https://doi.org/10.5194/bg-19-165-2022, 2022
Short summary
Short summary
We evaluated a new diffusive soil probe integrated with high-resolution gas analyzers to measure soil gases in real time at a centimeter scale. Using columns with simple silica and soil, we captured changes in carbon dioxide (CO2), volatile organic compounds (VOCs), and nitrous oxide (N2O) with its isotopes to distinguish potential nutrient sources and microbial metabolism. This approach will advance the use of soil gases as important signals to understand and monitor soil fertility and health.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 29–45, https://doi.org/10.5194/bg-19-29-2022, https://doi.org/10.5194/bg-19-29-2022, 2022
Short summary
Short summary
Modeling vegetation canopy is important in predicting whether the land remains a carbon sink to mitigate climate change in the near future. Vegetation canopy model complexity, however, impacts the model-predicted carbon and water fluxes as well as canopy fluorescence, even if the same suite of model inputs is used. Given the biases caused by canopy model complexity, we recommend not misusing parameters inverted using different models or assumptions.
Cited articles
Alm, J., Saarnio, S., Nykanen, H., Silvola, J., and Martikainen, P. J.: Winter CO2, CH4 and N2O fluxes on some natural and drained boreal peatlands, Biogeochemistry, 44, 163–186, https://doi.org/10.1023/A:1006074606204, 1999a.
Alm, J., Schulman, L., Walden, J., Nykanen, H., Martikainen, P. J., and Silvola, J.: Carbon balance of a boreal bog during a year with an exceptionally dry summer, Biogeochemistry, 80, 161–174, https://doi.org/10.1890/0012-9658(1999)080[0161:CBOABB]2.0.CO;2, 1999b.
Armentano, T. V. and Menges, E. S.: Patterns of Change in the Carbon Balance of Organic Soil-Wetlands of the Temperate Zone, J. Ecol., 74, 755–774, https://doi.org/10.2307/2260396, 1986.
Arneth, A., Kurbatova, J., Kolle, O., Shibistova, O. B., Lloyd, J., Vygodskaya, N. N., and Schulze, E. D.: Comparative ecosystem-atmosphere exchange of energy and mass in a European Russian and a central Siberian bog II. Interseasonal and interannual variability of CO2 fluxes, Tellus B., 54, 514–530, https://doi.org/10.1034/j.1600-0889.2002.01349.x, 2002.
Aubinet, M., Feigenwinter, C., Heinesch, B., Laffineur, Q., Papale, D., Reichstein, M., Rinne, J., and van Gorsel, E.: Nighttime Flux Correction, in: Eddy Covariance A Practical Guide to Measurment and Data Analysis, edited by: Aubinet, M., Vesala, T., and Papale, D., Springer, 133–157, 2012.
Aurela, M., Riutta, T., Laurila, T., Tuovinen, J. P., Vesala, T., Tuittila, E. S., Rinne, J., Haapanala, S., and Laine, J.: CO2 exchange of a sedge fen in southern Finland – The impact of a drought period, Tellus B, 59, 826–837, https://doi.org/10.1111/j.1600-0889.2007.00309.x, 2007.
Aurela, M., Lohila, A., Tuovinen, J. P., Hatakka, J., Riutta, T., and Laurila, T.: Carbon dioxide exchange on a northern boreal fen, Boreal. Environ. Res., 14, 699–710, 2009.
Baldocchi, D. D., Hicks, B. B., and Meyers, T. P.: Measuring Biosphere-Atmosphere Exchanges of Biologically Related Gases with Micrometeorological Methods, Ecology, 69, 1331–1340, https://doi.org/10.2307/1941631, 1988.
Braekke, F. H.: Nutrient Relationships in Forest Stands – Effects of Drainage and Fertilization on Surface Peat Layers, Forest Ecol. Manage., 21, 269–284, https://doi.org/10.1016/0378-1127(87)90048-X, 1987.
Braekke, F. H. and Finer, L.: Fertilization Effects on Surface Peat of Pine Bogs, Scand. J. Forest Res., 6, 433–449, https://doi.org/10.1080/02827589109382681, 1991.
Bubier, J., Crill, P., Mosedale, A., Frolking, S. and Linder, E.: Peatland responses to varying interannual moisture conditions as measured by automatic CO2 chambers, Global Biogeochem. Cy., 17, 1066, https://doi.org/10.1029/2002GB001946, 2003a.
Bubier, J. L., Bhatia, G., Moore, T. R., Roulet, N. T., and Lafleur, P. M.: Spatial and temporal variability in growing-season net ecosystem carbon dioxide exchange at a large peatland in Ontario, Canada, Ecosystems, 6, 353–367, https://doi.org/10.1007/s10021-003-0125-0, 2003b.
Burba, G., Furtaw, M. D., McDermitt, D. K., and Eckles, R.: Combining the strengths of open-path and closed-path designs into a single CO2/H2O gas analyzer, American Geophysical Union Fall Meeting, San Francisco, California, USA, 14–18 December, 2009.
Burba, G. G., McDermitt, D. K., Anderson, D. J., Furtaw, M. D., and Eckles, R. D.: Novel design of an enclosed CO2/H2O gas analyser for eddy covariance flux measurements, Tellus B, 62, 743–748, https://doi.org/10.1111/j.1600-0889.2010.00468.x, 2010.
Byrne, K. A., Chojnicki, B., Christensen, T. R., Drösler, M., Freibauer, A., Friborg, T., Frolking, S., Lindroth, A., Mailhammer, J., Malmer, N., Selin, P., Turunen, J., Valentini, R., and Zetterberg, L.: EU peatlands: Current carbon stocks and trace gas fluxes, CarboEurope-GHG Concerted Action-Synthesis of the European Greenhouse Gas Budget, Carboeurope GHG, Report 4/2004, 58 pp., 2004.
Cannell, M. G. R., Dewar, R. C., and Pyatt, D. G.: Conifer Plantations on Drained Peatlands in Britain – A Net Gain Or Loss of Carbon, Forestry, 66, 353–369, https://doi.org/10.1093/forestry/66.4.353, 1993.
Clymo, R. S.: The Limits to Peat Bog Growth, Philos. T. R. Soc. B, 303, 605–654, https://doi.org/10.1098/rstb.1984.0002, 1984.
Couwenberg, J.: Greenhouse gas emissions from managed peat soils: is the IPCC reporting guidance realistic?, Mires Peat, 8, 1–10, 2011.
Dragoni, D., Schmid, H. P., Grimmond, C. S. B., and Loescher, H. W.: Uncertainty of annual net ecosystem productivity estimated using eddy covariance flux measurements, J. Geophys. Res.-Atmos., 112, D17102, https://doi.org/10.1029/2006JD008149, 2007.
Drösler, M., Freibauer, A., Christensen, T., and Friborg, T.: Observations and status of peatland greenhouse gas emissions in Europe, in: The Continental-Scale Greenhouse Gas Balance of Europe, edited by: Dolman, A. J., Freibauer, A., and Valentini, R., Springer, New York, 243–261, 2008.
Dunn, A. L., Barford, C. C., Wofsy, S. C., Goulden, M. L., and Daube, B. C.: A long-term record of carbon exchange in a boreal black spruce forest: means, responses to interannual variability, and decadal trends, Glob. Change Biol., 13, 577–590, https://doi.org/10.1111/j.1365-2486.2006.01221.x, 2007.
Erwin, K. L.: Wetlands and global climate change: the role of wetland restoration in a changing world, Wetlands Ecol. Manage., 17, 71–84, https://doi.org/10.1007/s11273-008-9119-1, 2009.
Falge, E., Baldocchi, D., Olson, R., Anthoni, P., Aubinet, M., Bernhofer, C., Burba, G., Ceulemans, R., Clement, R., Dolman, H., Granier, A., Gross, P., Grunwald, T., Hollinger, D., Jensen, N. O., Katul, G., Keronen, P., Kowalski, A., Lai, C. T., Law, B. E., Meyers, T., Moncrieff, H., Moors, E., Munger, J. W., Pilegaard, K., Rannik, U., Rebmann, C., Suyker, A., Tenhunen, J., Tu, K., Verma, S., Vesala, T., Wilson, K., and Wofsy, S.: Gap filling strategies for defensible annual sums of net ecosystem exchange, Agr. Forest Meteorol., 107, 43–69, https://doi.org/10.1016/S0168-1923(00)00225-2, 2001.
Finkelstein, P. L. and Sims, P. F.: Sampling error in eddy correlation flux measurements, J. Geophys. Res.-Atmos., 106, 3503–3509, https://doi.org/10.1029/2000JD900731, 2001.
Foken, T., Aubinet, M., and Leuning, R.: The Eddy Covariance Method, in: Eddy Covariance A Practical Guide to Measurment and Data Analysis, edited by: Aubinet, M., Vesala, T., and Papale, D., Springer, 1–19, 2012.
Frolking, S. E. and Roulet, N. T.: Holocene radiative forcing impact of northern peatland carbon accumulation and methane emissions, Glob. Change Biol., 13, 1079–1088, https://doi.org/10.1111/j.1365-2486.2007.01339.x, 2007.
Gorham, E.: Northern Peatlands – Role in the Carbon-Cycle and Probable Responses to Climatic Warming, Ecol. Appl., 1, 182–195, https://doi.org/10.2307/1941811, 1991.
Goulden, M. L. and Crill, P. M.: Automated measurements of CO2 exchange at the moss surface of a black spruce forest, Tree Physiol., 17, 537–542, 1997.
Goulden, M. L., Munger, J. W., Fan, S. M., Daube, B. C., and Wofsy, S. C.: Measurements of carbon sequestration by long-term eddy covariance: Methods and a critical evaluation of accuracy, Glob. Change Biol., 2, 169–182, https://doi.org/10.1111/j.1365-2486.1996.tb00070.x, 1996.
Gower, S. T., McMurtrie, R. E., and Murty, D.: Aboveground net primary production decline with stand age: Potential causes, Trends Ecol. Evol., 11, 378–382, https://doi.org/10.1016/0169-5347(96)10042-2, 1996.
Griffis, T. J., Black, T. A., Morgenstern, K., Barr, A. G., Nesic, Z., Drewitt, G. B., Gaumont-Guay, D., and McCaughey, J. H.: Ecophysiological controls on the carbon balances of three southern boreal forests, Agr. Forest Meteorol., 117, 53–71, https://doi.org/10.1016/S0168-1923(03)00023-6, 2003.
Gronlund, A., Hauge, A., Hovde, A., and Rasse, D. P.: Carbon loss estimates from cultivated peat soils in Norway: a comparison of three methods, Nutr. Cycl. Agroecosyst., 81, 157–167, https://doi.org/10.1007/s10705-008-9171-5, 2008.
Hargreaves, K. J., Milne, R., and Cannell, M. G. R.: Carbon balance of afforested peatland in Scotland, Forestry, 76, 299–317, https://doi.org/10.1093/forestry/76.3.299, 2003.
Hendriks, D. M. D., van Huissteden, J., Dolman, A. J., and van der Molen, M. K.: The full greenhouse gas balance of an abandoned peat meadow, Biogeosciences, 4, 411–424, https://doi.org/10.5194/bg-4-411-2007, 2007.
Houghton, J. T., Jenkins, G. J., and Ephraums, J. J.: Climate Change. The IPCC scientific assessment, Cambridge University Press, Cambridge, 1990.
Kluge, B., Wessolek, G., Facklam, M., Lorenz, M., and Schwarzel, K.: Long-term carbon loss and CO2-C release of drained peatland soils in northeast Germany, Eur. J. Soil Sci., 59, 1076–1086, https://doi.org/10.1111/j.1365-2389.2008.01079.x, 2008.
Kormann, R. and Meixner, F. X.: An analytical footprint model for non-neutral stratification, Bound.-Lay. Meteor., 99, 207–224, https://doi.org/10.1023/A:1018991015119, 2001.
Lafleur, P. M., Roulet, N. T., Bubier, J. L., Frolking, S., and Moore, T. R.: Interannual variability in the peatland-atmosphere carbon dioxide exchange at an ombrotrophic bog, Global Biogeochem. Cy., 17, 1036, https://doi.org/10.1029/2002GB001983, 2003.
Lafleur, P. M., Moore, T. R., Roulet, N. T., and Frolking, S.: Ecosystem respiration in a cool temperate bog depends on peat temperature but not water table, Ecosystems, 8, 619–629, https://doi.org/10.1007/s10021-003-0131-2, 2005.
Leifeld, J., Gubler, L., and Grunig, A.: Organic matter losses from temperate ombrotrophic peatlands: an evaluation of the ash residue method, Plant Soil, 341, 349–361, https://doi.org/10.1007/s11104-010-0649-y, 2011a.
Leifeld, J., Muller, M., and Fuhrer, J.: Peatland subsidence and carbon loss from drained temperate fens, Soil Use Manage., 27, 170–176, https://doi.org/10.1111/j.1475-2743.2011.00327.x, 2011b.
Lindroth, A., Grelle, A., and Moren, A. S.: Long-term measurements of boreal forest carbon balance reveal large temperature sensitivity, Glob. Change Biol., 4, 443–450, https://doi.org/10.1046/j.1365-2486.1998.00165.x, 1998.
Lloyd, J. and Taylor, J. A.: On the Temperature-Dependence of Soil Respiration, Funct. Ecol., 8, 315–323, 1994.
Lohila, A., Laurila, T., Aro, L., Aurela, M., Tuovinen, J. P., Laine, J., Kolari, P., and Minkkinen, K.: Carbon dioxide exchange above a 30-year-old Scots pine plantation established on organic-soil cropland, Boreal. Environ. Res., 12, 141–157, 2007.
Lohila, A., Minkkinen, K., Aurela, M., Tuovinen, J. P., Penttila, T., Ojanen, P., and Laurila, T.: Greenhouse gas flux measurements in a forestry-drained peatland indicate a large carbon sink, Biogeosciences, 8, 3203–3218, https://doi.org/10.5194/bg-8-3203-2011, 2011.
Lund, M., Lindroth, A., Christensen, T. R., and Strom, L.: Annual CO2 balance of a temperate bog, Tellus B., 59, 804–811, https://doi.org/10.1111/j.1600-0889.2007.00303.x, 2007.
Maljanen, M., Sigurdsson, B., Guomundsson, J., Oskarsson, H., Huttunen, J., and Martikainen, P.: Greenhouse gas balances of managed peatlands in the Nordic countries – present knowledge and gaps, Biogeosciences, 7, 2711–2738, https://doi.org/10.5194/bg-7-2711-2010, 2010.
Massman, W. J. and Lee, X.: Eddy covariance flux corrections and uncertainties in long-term studies of carbon and energy exchanges, Agr. Forest Meteorol., 113, 121–144, https://doi.org/10.1016/S0168-1923(02)00105-3, 2002.
Mauder, M. and Foken, T.: Documentation and Instruction Manual of the Eddy-Covariance Software Package TK3, Arbeitsergebnisse Nr. 42, University of Bayreuth, Department of Micrometeorology, 125 pp., 2011.
Mauder, M., Cuntz, M., Druee, C., Graf, A., Rebmann, C., Schmid, H. P., Schmidt, M., and Steinbrecher, R.: A strategy for quality and uncertainty assessment of long-term eddy-covariance measurements, Agr. Forest Meteorol., 169, 122–135, https://doi.org/10.1016/j.agrformet.2012.09.006, 2013.
Meyer, A., Tarvainen, L., Nousratpour, A., Bjork, R., Ernfors, M., Grelle, A., Klemedtsson, A., Lindroth, A., Rantfors, M., Rutting, T., Wallin, G., Weslien, P., and Klemedtsson, L.: A fertile peatland forest does not constitute a major greenhouse gas sink, Biogeosciences, 10, 7739–7758, https://doi.org/10.5194/bg-10-7739-2013, 2013.
Minkkinen, K., Korhonen, R., Savolainen, I., and Laine, J.: Carbon balance and radiative forcing of Finnish peatlands 1900–2100 – the impact of forestry drainage, Glob. Change Biol., 8, 785–799, https://doi.org/10.1046/j.1365-2486.2002.00504.x, 2002.
Minkkinen, K., Laine, J., Shurpali, N. J., Makiranta, P., Alm, J., and Penttila, T.: Heterotrophic soil respiration in forestry-drained peatlands, Boreal. Environ. Res., 12, 115–126, 2007.
Moffat, A. M., Papale, D., Reichstein, M., Hollinger, D. Y., Richardson, A. D., Barr, A. G., Beckstein, C., Braswell, B. H., Churkina, G., Desai, A. R., Falge, E., Gove, J. H., Heimann, M., Hui, D. F., Jarvis, A. J., Kattge, J., Noormets, A., and Stauch, V. J.: Comprehensive comparison of gap-filling techniques for eddy covariance net carbon fluxes, Agr. Forest Meteorol., 147, 209–232, https://doi.org/10.1016/j.agrformet.2007.08.011, 2007.
Moncrieff, J., Clement, R., Finnigan, J. J., and Meyers, T.: Averaging, Detrending, and Filtering of Eddy Covariance Time Series, in: Handbook of Micrometeorology: A Guide for Surface Flux Measurement and Analysis, Springer Netherlands, 7–31, 2004.
Moncrieff, J. B., Massheder, J. M., deBruin, H., Elbers, J., Friborg, T., Heusinkveld, B., Kabat, P., Scott, S., Soegaard, H., and Verhoef, A.: A system to measure surface fluxes of momentum, sensible heat, water vapour and carbon dioxide, J. Hydrol., 189, 589–611, https://doi.org/10.1016/S0022-1694(96)03194-0, 1997.
Moncrieff, J. B., Malhi, Y., and Leuning, R.: The propagation of errors in long-term measurements of land-atmosphere fluxes of carbon and water, Glob. Change Biol., 2, 231–240, https://doi.org/10.1111/j.1365-2486.1996.tb00075.x, 1996.
Moore, C. J.: Frequency-Response Corrections for Eddy-Correlation Systems, Bound.-Layer Meteor., 37, 17–35, https://doi.org/10.1007/BF00122754, 1986.
Moore, T. R., Roulet, N. T., and Waddington, J. M.: Uncertainty in predicting the effect of climatic change on the carbon cycling of Canadian peatlands, Clim. Change, 40, 229–245, https://doi.org/10.1023/A:1005408719297, 1998.
Ojanen, P., Minkkinen, K., and Penttila, T.: The current greenhouse gas impact of forestry-drained boreal peatlands, Forest Ecol. Manage., 289, 201–208, https://doi.org/10.1016/j.foreco.2012.10.008, 2013.
Reichstein, M., Falge, E., Baldocchi, D., Papale, D., Aubinet, M., Berbigier, P., Bernhofer, C., Buchmann, N., Gilmanov, T., Granier, A., Grunwald, T., Havrankova, K., Ilvesniemi, H., Janous, D., Knohl, A., Laurila, T., Lohila, A., Loustau, D., Matteucci, G., Meyers, T., Miglietta, F., Ourcival, J. M., Pumpanen, J., Rambal, S., Rotenberg, E., Sanz, M., Tenhunen, J., Seufert, G., Vaccari, F., Vesala, T., Yakir, D., and Valentini, R.: On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm, Glob. Change Biol., 11, 1424–1439, https://doi.org/10.1111/j.1365-2486.2005.001002.x, 2005.
Richardson, A. D. and Hollinger, D. Y.: A method to estimate the additional uncertainty in gap-filled NEE resulting from long gaps in the CO2 flux record, Agr. Forest Meteorol., 147, 199–208, https://doi.org/10.1016/j.agrformet.2007.06.004, 2007.
Richardson, A. D., Aubinet, M., Barr, A., Hollinger, D., Ibrom, A., Lasslop, G., and Reichstein, M.: Uncertainty Quantification, in: Eddy Covariance A Practical Guide to Measurement and Data Analysis, edited by: Aubinet, M., Vesala, T., and Papale, D., Springer, 173–209, 2012.
Rinne, J., Riutta, T., Pihlatie, M., Aurela, M., Haapanala, S., Tuovinen, J. P., Tuittila, E. S., and Vesala, T.: Annual cycle of methane emission from a boreal fen measured by the eddy covariance technique, Tellus B, 59, 449–457, https://doi.org/10.1111/j.1600-0889.2007.00261.x, 2007.
Rogiers, N., Conen, F., Furger, M., Stockli, R., and Eugster, W.: Impact of past and present land-management on the C-balance of a grassland in the Swiss Alps, Glob. Change Biol., 14, 2613–2625, https://doi.org/10.1111/j.1365-2486.2008.01680.x, 2008.
Rydin, H. and Jeglum, J. K.: The Biology of Peatlands, 2nd Edition, Oxford University Press, Oxford, United Kingdom, 343 pp., 2013.
Saarnio, S., Morero, M., Shurpali, N.J., Tuittila, E.S., Makila, M. and Alm, J.: Annual CO2 and CH4 fluxes of pristine boreal mires as a background for the lifecycle analyses of peat energy, Boreal. Environ. Res., 12, 101–113, 2007.
Schmid, H. P. and Lloyd, C. R.: Spatial representativeness and the location bias of flux footprints over inhomogeneous areas, Agr. Forest Meteorol., 93, 195–209, https://doi.org/10.1016/S0168-1923(98)00119-1, 1999.
Schmid, H. P., Su, H. B., Vogel, C. S., and Curtis, P. S.: Ecosystem-atmosphere exchange of carbon dioxide over a mixed hardwood forest in northern lower Michigan, J. Geophys. Res.-Atmos., 108, 4417, https://doi.org/10.1029/2002JD003011, 2003.
Simola, H., Pitkanen, A., and Turunen, J.: Carbon loss in drained forestry peatlands in Finland, estimated by re-sampling peatlands surveyed in the 1980s, Eur. J. Soil Sci., 63, 798–807, https://doi.org/10.1111/j.1365-2389.2012.01499.x, 2012.
Sottocornola, M. and Kiely, G.: An Atlantic blanket bog is a modest CO2 sink, Geophys. Res. Lett., 32, L23804, https://doi.org/10.1029/2005GL024731, 2005.
Tolonen, K. and Turunen, J.: Accumulation rates of carbon in mires in Finland and implications for climate change, Holocene, 6, 171–178, https://doi.org/10.1177/095968369600600204, 1996.
Turunen, J., Tomppo, E., Tolonen, K., and Reinikainen, A.: Estimating carbon accumulation rates of undrained mires in Finland – application to boreal and subarctic regions, Holocene, 12, 69–80, https://doi.org/10.1191/0959683602hl522rp, 2002.
Von Arnold, K., Weslien, P., Nilsson, M., Svensson, B. H., and Klemedtsson, L.: Fluxes of CO2, CH4 and N2O from drained coniferous forests on organic soils, Forest Ecol. Manage., 210, 239–254, https://doi.org/10.1016/j.foreco.2005.02.031, 2005.
Von Post, L.: Sveriges geologiska undersoknings torvinventering och nagre av dess hittills vunna resultat, Sr Mosskulturfor, Tidstr 1, 1–27, 1922.
Von Sengbusch, P.: Untersuchungen zur Ökologie von Pinus rotundata LINK (Moor-Kiefer) im Südschwarzwald, University of Freiburg, 151 pp., 2002.
Webb, E. K., Pearman, G. I., and Leuning, R.: Correction of Flux Measurements for Density Effects Due to Heat and Water-Vapor Transfer, Q. J. R. Meteorol. Soc., 106, 85–100, https://doi.org/10.1002/qj.49710644707, 1980.
Wilczak, J. M., Oncley, S. P., and Stage, S. A.: Sonic anemometer tilt correction algorithms, Bound.-Lay. Meteor., 99, 127–150, https://doi.org/10.1023/A:1018966204465, 2001.
Yoshikawa, K., Overduin, P. P., and Harden, J. W.: Moisture content measurements of moss (Sphagnum spp.) using commercial sensors, Permafrost Perigl. Process., 15, 309–318, https://doi.org/10.1002/ppp.505, 2004.
Special issue
Altmetrics
Final-revised paper
Preprint