Articles | Volume 17, issue 4
https://doi.org/10.5194/bg-17-1033-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-1033-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
26 Feb 2020
Research article |
| 26 Feb 2020
| 26 Feb 2020
Estimating causal networks in biosphere–atmosphere interaction with the PCMCI approach
Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
Laboratory of Hydrology and Water Management, Ghent University, Ghent 9000, Belgium
Jakob Runge
German Aerospace Center, Institute of Data Science, 07745 Jena, Germany
Diego G. Miralles
Laboratory of Hydrology and Water Management, Ghent University, Ghent 9000, Belgium
Mirco Migliavacca
Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
Oscar Perez-Priego
Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
Tarek El-Madany
Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
Arnaud Carrara
Fundación Centro de Estudios Ambientales del Mediterráneo (CEAM), 46980 Paterna, Spain
Miguel D. Mahecha
Max Planck Institute for Biogeochemistry, 07745 Jena, Germany
German Centre for Integrative Biodiversity Research (iDiv), Deutscher Platz 5e, 04103 Leipzig, Germany
Related authors
Christopher Krich, Mirco Migliavacca, Diego G. Miralles, Guido Kraemer, Tarek S. El-Madany, Markus Reichstein, Jakob Runge, and Miguel D. Mahecha
Biogeosciences, 18, 2379–2404, https://doi.org/10.5194/bg-18-2379-2021, https://doi.org/10.5194/bg-18-2379-2021, 2021
Short summary
Short summary
Ecosystems and the atmosphere interact with each other. These interactions determine e.g. the water and carbon fluxes and thus are crucial to understand climate change effects. We analysed the interactions for many ecosystems across the globe, showing that very different ecosystems can have similar interactions with the atmosphere. Meteorological conditions seem to be the strongest interaction-shaping factor. This means that common principles can be identified to describe ecosystem behaviour.
Laura Nadolski, Tarek S. El-Madany, Jacob Nelson, Arnaud Carrara, Gerardo Moreno, Richard Nair, Yunpeng Luo, Anke Hildebrandt, Victor Rolo, Markus Reichstein, and Sung-Ching Lee
Biogeosciences, 22, 2935–2958, https://doi.org/10.5194/bg-22-2935-2025, https://doi.org/10.5194/bg-22-2935-2025, 2025
Short summary
Short summary
Semi-arid ecosystems are crucial for Earth's carbon balance and are sensitive to changes in nitrogen (N) and phosphorus (P) levels. Their carbon dynamics are complex and not fully understood. We studied how long-term nutrient changes affect carbon exchange. In summer, the addition of N+P changed plant composition and productivity. In transitional seasons, carbon exchange was less weather-dependent with N. The addition of N and N+P increases carbon-exchange variability, driven by grass greenness.
Friedrich J. Bohn, Ana Bastos, Romina Martin, Anja Rammig, Niak Sian Koh, Giles B. Sioen, Bram Buscher, Louise Carver, Fabrice DeClerck, Moritz Drupp, Robert Fletcher, Matthew Forrest, Alexandros Gasparatos, Alex Godoy-Faúndez, Gregor Hagedorn, Martin C. Hänsel, Jessica Hetzer, Thomas Hickler, Cornelia B. Krug, Stasja Koot, Xiuzhen Li, Amy Luers, Shelby Matevich, H. Damon Matthews, Ina C. Meier, Mirco Migliavacca, Awaz Mohamed, Sungmin O, David Obura, Ben Orlove, Rene Orth, Laura Pereira, Markus Reichstein, Lerato Thakholi, Peter H. Verburg, and Yuki Yoshida
Biogeosciences, 22, 2425–2460, https://doi.org/10.5194/bg-22-2425-2025, https://doi.org/10.5194/bg-22-2425-2025, 2025
Short summary
Short summary
An interdisciplinary collaboration of 36 international researchers from 35 institutions highlights recent findings in biosphere research. Within eight themes, they discuss issues arising from climate change and other anthropogenic stressors and highlight the co-benefits of nature-based solutions and ecosystem services. Based on an analysis of these eight topics, we have synthesized four overarching insights.
Na Li, Sebastian Sippel, Nora Linscheid, Miguel D. Mahecha, Markus Reichstein, and Ana Bastos
EGUsphere, https://doi.org/10.5194/egusphere-2025-1924, https://doi.org/10.5194/egusphere-2025-1924, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
Short summary
Short summary
The global land carbon sink has increased since the pre-industrial period, mainly caused by increasing atmospheric CO2 emissions and climate change. However, the large year-to-year variations can mask or amplify this trend. Here, we detect the time for the anthropogenic signal to emerge over natural variations in land carbon sink. We removed the circulation-induced variations in the global land carbon sink and effectively reduced the detection time of anthropogenic signal.
Wolfgang Knorr, Matthew Williams, Tea Thum, Thomas Kaminski, Michael Voßbeck, Marko Scholze, Tristan Quaife, T. Luke Smallman, Susan C. Steele-Dunne, Mariette Vreugdenhil, Tim Green, Sönke Zaehle, Mika Aurela, Alexandre Bouvet, Emanuel Bueechi, Wouter Dorigo, Tarek S. El-Madany, Mirco Migliavacca, Marika Honkanen, Yann H. Kerr, Anna Kontu, Juha Lemmetyinen, Hannakaisa Lindqvist, Arnaud Mialon, Tuuli Miinalainen, Gaétan Pique, Amanda Ojasalo, Shaun Quegan, Peter J. Rayner, Pablo Reyes-Muñoz, Nemesio Rodríguez-Fernández, Mike Schwank, Jochem Verrelst, Songyan Zhu, Dirk Schüttemeyer, and Matthias Drusch
Geosci. Model Dev., 18, 2137–2159, https://doi.org/10.5194/gmd-18-2137-2025, https://doi.org/10.5194/gmd-18-2137-2025, 2025
Short summary
Short summary
When it comes to climate change, the land surface is where the vast majority of impacts happen. The task of monitoring those impacts across the globe is formidable and must necessarily rely on satellites – at a significant cost: the measurements are only indirect and require comprehensive physical understanding. We have created a comprehensive modelling system that we offer to the research community to explore how satellite data can be better exploited to help us capture the changes that happen on our lands.
Mana Gharun, Ankit Shekhar, Lukas Hörtnagl, Luana Krebs, Nicola Arriga, Mirco Migliavacca, Marilyn Roland, Bert Gielen, Leonardo Montagnani, Enrico Tomelleri, Ladislav Šigut, Matthias Peichl, Peng Zhao, Marius Schmidt, Thomas Grünwald, Mika Korkiakoski, Annalea Lohila, and Nina Buchmann
Biogeosciences, 22, 1393–1411, https://doi.org/10.5194/bg-22-1393-2025, https://doi.org/10.5194/bg-22-1393-2025, 2025
Short summary
Short summary
The effect of winter warming on forest CO2 fluxes has rarely been investigated. We tested the effect of the warm winter of 2020 on the forest CO2 fluxes across 14 sites in Europe and found that the net ecosystem productivity (NEP) across most sites declined during the warm winter due to increased respiration fluxes.
Javier Pacheco-Labrador, Ulisse Gomarasca, Daniel E. Pabon-Moreno, Wantong Li, Mirco Migliavacca, Martin Jung, and Gregory Duveiller
EGUsphere, https://doi.org/10.5194/egusphere-2025-318, https://doi.org/10.5194/egusphere-2025-318, 2025
Short summary
Short summary
Measuring biodiversity is necessary to assess its loss, evolution, and role in ecosystem functions. Satellites image the whole terrestrial surface and could cost-efficiently map plant diversity globally. However, developing the necessary methods lacks consistent and sufficient field measurements. Thus, we propose using a simulation tool that generates virtual ecosystems, with species properties and functions varying in response to meteorology and the respective remote sensing imagery.
Marco Girardello, Gonzalo Oton, Matteo Piccardo, Mark Pickering, Agata Elia, Guido Ceccherini, Mariano Garcia, Mirco Migliavacca, and Alessandro Cescatti
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-471, https://doi.org/10.5194/essd-2024-471, 2025
Preprint under review for ESSD
Short summary
Short summary
Our research addresses the significant challenge of assessing forest structural diversity over large spatial scales, which is crucial for understanding the relationship between canopy structure, biodiversity, and ecosystem functioning. The advent of spaceborne LiDAR sensors, such as GEDI, has revolutionised the ability to obtain high-quality information on forest structural parameters. Our contribution provides a novel, spatially-explicit dataset on eight forest structural diversity metrics.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Jiří Dušek, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo A. Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Mana Gharun, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
Biogeosciences, 21, 5079–5115, https://doi.org/10.5194/bg-21-5079-2024, https://doi.org/10.5194/bg-21-5079-2024, 2024
Short summary
Short summary
The movement of water, carbon, and energy from the Earth's surface to the atmosphere, or flux, is an important process to understand because it impacts our lives. Here, we outline a method called FLUXCOM-X to estimate global water and CO2 fluxes based on direct measurements from sites around the world. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Francesco Martinuzzi, Miguel D. Mahecha, Gustau Camps-Valls, David Montero, Tristan Williams, and Karin Mora
Nonlin. Processes Geophys., 31, 535–557, https://doi.org/10.5194/npg-31-535-2024, https://doi.org/10.5194/npg-31-535-2024, 2024
Short summary
Short summary
We investigated how machine learning can forecast extreme vegetation responses to weather. Examining four models, no single one stood out as the best, though "echo state networks" showed minor advantages. Our results indicate that while these tools are able to generally model vegetation states, they face challenges under extreme conditions. This underlines the potential of artificial intelligence in ecosystem modeling, also pinpointing areas that need further research.
Luciano Emmert, Susan Trumbore, Joaquim dos Santos, Adriano Lima, Niro Higuchi, Robinson Negrón-Juárez, Cléo Dias-Júnior, Tarek El-Madany, Olaf Kolle, Gabriel Ribeiro, and Daniel Marra
EGUsphere, https://doi.org/10.5194/egusphere-2024-3234, https://doi.org/10.5194/egusphere-2024-3234, 2024
Preprint archived
Short summary
Short summary
For the first time, we documented wind gusts with the potential to damage trees in a forest in the Central Amazon. We used meteorological data collected at crown height over 24 months. We recorded 424 gusts, which occur more frequently and intensely in higher elevated areas and during the transition from the dry to the wet season. More intense rains showed the strongest relationship with extreme winds, highlighting the role of extreme events in tree mortality.
Anca Anghelea, Ewelina Dobrowolska, Gunnar Brandt, Martin Reinhardt, Miguel Mahecha, Tejas Morbagal Harish, and Stephan Meissl
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-4-2024, 13–18, https://doi.org/10.5194/isprs-archives-XLVIII-4-2024-13-2024, https://doi.org/10.5194/isprs-archives-XLVIII-4-2024-13-2024, 2024
Mélanie Weynants, Chaonan Ji, Nora Linscheid, Ulrich Weber, Miguel D. Mahecha, and Fabian Gans
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-396, https://doi.org/10.5194/essd-2024-396, 2024
Preprint under review for ESSD
Short summary
Short summary
Climate extremes are intensifying. The impacts of heatwaves and droughts can be made worse when they happen at the same time. Dheed is a global database of dry and hot compound extreme events from 1950 to 2022. It can be combined with other data to study the impacts of those events on terrestrial ecosystems, specific species or human societies. Dheed's analysis confirms that extremely dry and hot days have become more common on all continents in recent decades, especially in Europe and Africa.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
Short summary
Short summary
Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Miguel D. Mahecha, Guido Kraemer, and Fabio Crameri
Earth Syst. Dynam., 15, 1153–1159, https://doi.org/10.5194/esd-15-1153-2024, https://doi.org/10.5194/esd-15-1153-2024, 2024
Short summary
Short summary
Our paper examines the visual representation of the planetary boundary concept, which helps convey Earth's capacity to sustain human life. We identify three issues: exaggerated impact sizes, confusing color patterns, and inaccessibility for colour-vision deficiency. These flaws can lead to overstating risks. We suggest improving these visual elements for more accurate and accessible information for decision-makers.
Francesco Martinuzzi, Miguel D. Mahecha, David Montero, Lazaro Alonso, and Karin Mora
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-4-W12-2024, 89–95, https://doi.org/10.5194/isprs-archives-XLVIII-4-W12-2024-89-2024, https://doi.org/10.5194/isprs-archives-XLVIII-4-W12-2024-89-2024, 2024
David Montero, Miguel D. Mahecha, César Aybar, Clemens Mosig, and Sebastian Wieneke
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-4-W12-2024, 105–112, https://doi.org/10.5194/isprs-archives-XLVIII-4-W12-2024-105-2024, https://doi.org/10.5194/isprs-archives-XLVIII-4-W12-2024-105-2024, 2024
Soufiane Karmouche, Evgenia Galytska, Gerald A. Meehl, Jakob Runge, Katja Weigel, and Veronika Eyring
Earth Syst. Dynam., 15, 689–715, https://doi.org/10.5194/esd-15-689-2024, https://doi.org/10.5194/esd-15-689-2024, 2024
Short summary
Short summary
This study explores Atlantic–Pacific interactions and their response to external factors. Causal analysis of 1950–2014 data reveals a shift from a Pacific- to an Atlantic-driven regime. Contrasting impacts between El Niño and tropical Atlantic temperatures are highlighted, along with different pathways connecting the two oceans. The findings also suggest increasing remote contributions of forced Atlantic responses in modulating local Pacific responses during the most recent analyzed decades.
Jan Sodoge, Christian Kuhlicke, Miguel D. Mahecha, and Mariana Madruga de Brito
Nat. Hazards Earth Syst. Sci., 24, 1757–1777, https://doi.org/10.5194/nhess-24-1757-2024, https://doi.org/10.5194/nhess-24-1757-2024, 2024
Short summary
Short summary
We delved into the socio-economic impacts of the 2018–2022 drought in Germany. We derived a dataset covering the impacts of droughts in Germany between 2000 and 2022 on sectors such as agriculture and forestry based on newspaper articles. Notably, our study illustrated that the longer drought had a wider reach and more varied effects. We show that dealing with longer droughts requires different plans compared to shorter ones, and it is crucial to be ready for the challenges they bring.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
Short summary
Short summary
Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Martin Jung, Jacob Nelson, Mirco Migliavacca, Tarek El-Madany, Dario Papale, Markus Reichstein, Sophia Walther, and Thomas Wutzler
Biogeosciences, 21, 1827–1846, https://doi.org/10.5194/bg-21-1827-2024, https://doi.org/10.5194/bg-21-1827-2024, 2024
Short summary
Short summary
We present a methodology to detect inconsistencies in perhaps the most important data source for measurements of ecosystem–atmosphere carbon, water, and energy fluxes. We expect that the derived consistency flags will be relevant for data users and will help in improving our understanding of and our ability to model ecosystem–climate interactions.
Oscar M. Baez-Villanueva, Mauricio Zambrano-Bigiarini, Diego G. Miralles, Hylke E. Beck, Jonatan F. Siegmund, Camila Alvarez-Garreton, Koen Verbist, René Garreaud, Juan Pablo Boisier, and Mauricio Galleguillos
Hydrol. Earth Syst. Sci., 28, 1415–1439, https://doi.org/10.5194/hess-28-1415-2024, https://doi.org/10.5194/hess-28-1415-2024, 2024
Short summary
Short summary
Various drought indices exist, but there is no consensus on which index to use to assess streamflow droughts. This study addresses meteorological, soil moisture, and snow indices along with their temporal scales to assess streamflow drought across hydrologically diverse catchments. Using data from 100 Chilean catchments, findings suggest that there is not a single drought index that can be used for all catchments and that snow-influenced areas require drought indices with larger temporal scales.
Steven J. De Hertog, Carmen E. Lopez-Fabara, Ruud van der Ent, Jessica Keune, Diego G. Miralles, Raphael Portmann, Sebastian Schemm, Felix Havermann, Suqi Guo, Fei Luo, Iris Manola, Quentin Lejeune, Julia Pongratz, Carl-Friedrich Schleussner, Sonia I. Seneviratne, and Wim Thiery
Earth Syst. Dynam., 15, 265–291, https://doi.org/10.5194/esd-15-265-2024, https://doi.org/10.5194/esd-15-265-2024, 2024
Short summary
Short summary
Changes in land use are crucial to achieve lower global warming. However, despite their importance, the effects of these changes on moisture fluxes are poorly understood. We analyse land cover and management scenarios in three climate models involving cropland expansion, afforestation, and irrigation. Results show largely consistent influences on moisture fluxes, with cropland expansion causing a drying and reduced local moisture recycling, while afforestation and irrigation show the opposite.
Dominik Rains, Isabel Trigo, Emanuel Dutra, Sofia Ermida, Darren Ghent, Petra Hulsman, Jose Gómez-Dans, and Diego G. Miralles
Earth Syst. Sci. Data, 16, 567–593, https://doi.org/10.5194/essd-16-567-2024, https://doi.org/10.5194/essd-16-567-2024, 2024
Short summary
Short summary
Land surface temperature and surface net radiation are vital inputs for many land surface and hydrological models. However, current remote sensing datasets of these variables come mostly at coarse resolutions, and the few high-resolution datasets available have large gaps due to cloud cover. Here, we present a continuous daily product for both variables across Europe for 2018–2019 obtained by combining observations from geostationary as well as polar-orbiting satellites.
Solomon H. Gebrechorkos, Jian Peng, Ellen Dyer, Diego G. Miralles, Sergio M. Vicente-Serrano, Chris Funk, Hylke E. Beck, Dagmawi T. Asfaw, Michael B. Singer, and Simon J. Dadson
Earth Syst. Sci. Data, 15, 5449–5466, https://doi.org/10.5194/essd-15-5449-2023, https://doi.org/10.5194/essd-15-5449-2023, 2023
Short summary
Short summary
Drought is undeniably one of the most intricate and significant natural hazards with far-reaching consequences for the environment, economy, water resources, agriculture, and societies across the globe. In response to this challenge, we have devised high-resolution drought indices. These indices serve as invaluable indicators for assessing shifts in drought patterns and their associated impacts on a global, regional, and local level facilitating the development of tailored adaptation strategies.
Samuel Scherrer, Gabriëlle De Lannoy, Zdenko Heyvaert, Michel Bechtold, Clement Albergel, Tarek S. El-Madany, and Wouter Dorigo
Hydrol. Earth Syst. Sci., 27, 4087–4114, https://doi.org/10.5194/hess-27-4087-2023, https://doi.org/10.5194/hess-27-4087-2023, 2023
Short summary
Short summary
We explored different options for data assimilation (DA) of the remotely sensed leaf area index (LAI). We found strong biases between LAI predicted by Noah-MP and observations. LAI DA that does not take these biases into account can induce unphysical patterns in the resulting LAI and flux estimates and leads to large changes in the climatology of root zone soil moisture. We tested two bias-correction approaches and explored alternative solutions to treating bias in LAI DA.
Richard Nair, Yunpeng Luo, Tarek El-Madany, Victor Rolo, Javier Pacheco-Labrador, Silvia Caldararu, Kendalynn A. Morris, Marion Schrumpf, Arnaud Carrara, Gerardo Moreno, Markus Reichstein, and Mirco Migliavacca
EGUsphere, https://doi.org/10.5194/egusphere-2023-2434, https://doi.org/10.5194/egusphere-2023-2434, 2023
Preprint archived
Short summary
Short summary
We studied a Mediterranean ecosystem to understand carbon uptake efficiency and its controls. These ecosystems face potential nitrogen-phosphorus imbalances due to pollution. Analysing six years of carbon data, we assessed controls at different timeframes. This is crucial for predicting such vulnerable regions. Our findings revealed N limitation on C uptake, not N:P imbalance, and strong influence of water availability. whether drought or wetness promoted net C uptake depended on timescale.
A. Elia, M. Pickering, M. Girardello, G. Oton, G. Ceccherini, S. Capobianco, M. Piccardo, G. Forzieri, M. Migliavacca, and A. Cescatti
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-4-W7-2023, 41–46, https://doi.org/10.5194/isprs-archives-XLVIII-4-W7-2023-41-2023, https://doi.org/10.5194/isprs-archives-XLVIII-4-W7-2023-41-2023, 2023
Steven J. De Hertog, Carmen E. Lopez-Fabara, Ruud van der Ent, Jessica Keune, Diego G. Miralles, Raphael Portmann, Sebastian Schemm, Felix Havermann, Suqi Guo, Fei Luo, Iris Manola, Quentin Lejeune, Julia Pongratz, Carl-Friedrich Schleussner, Sonia I. Seneviratne, and Wim Thiery
EGUsphere, https://doi.org/10.5194/egusphere-2023-953, https://doi.org/10.5194/egusphere-2023-953, 2023
Preprint archived
Short summary
Short summary
Land cover and management changes can affect the climate and water availability. In this study we use climate model simulations of extreme global land cover changes (afforestation, deforestation) and land management changes (irrigation) to understand the effects on the global water cycle and local to continental water availability. We show that cropland expansion generally leads to higher evaporation and lower amounts of precipitation and afforestation and irrigation expansion to the opposite.
Soufiane Karmouche, Evgenia Galytska, Jakob Runge, Gerald A. Meehl, Adam S. Phillips, Katja Weigel, and Veronika Eyring
Earth Syst. Dynam., 14, 309–344, https://doi.org/10.5194/esd-14-309-2023, https://doi.org/10.5194/esd-14-309-2023, 2023
Short summary
Short summary
This study uses a causal discovery method to evaluate the ability of climate models to represent the interactions between the Atlantic multidecadal variability (AMV) and the Pacific decadal variability (PDV). The approach and findings in this study present a powerful methodology that can be applied to a number of environment-related topics, offering tremendous insights to improve the understanding of the complex Earth system and the state of the art of climate modeling.
Sinikka Jasmin Paulus, Tarek Sebastian El-Madany, René Orth, Anke Hildebrandt, Thomas Wutzler, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Olaf Kolle, Markus Reichstein, and Mirco Migliavacca
Hydrol. Earth Syst. Sci., 26, 6263–6287, https://doi.org/10.5194/hess-26-6263-2022, https://doi.org/10.5194/hess-26-6263-2022, 2022
Short summary
Short summary
In this study, we analyze small inputs of water to ecosystems such as fog, dew, and adsorption of vapor. To measure them, we use a scaling system and later test our attribution of different water fluxes to weight changes. We found that they occur frequently during 1 year in a dry summer ecosystem. In each season, a different flux seems dominant, but they all mainly occur during the night. Therefore, they could be important for the biosphere because rain is unevenly distributed over the year.
Feng Zhong, Shanhu Jiang, Albert I. J. M. van Dijk, Liliang Ren, Jaap Schellekens, and Diego G. Miralles
Hydrol. Earth Syst. Sci., 26, 5647–5667, https://doi.org/10.5194/hess-26-5647-2022, https://doi.org/10.5194/hess-26-5647-2022, 2022
Short summary
Short summary
A synthesis of rainfall interception data from past field campaigns is performed, including 166 forests and 17 agricultural plots distributed worldwide. These site data are used to constrain and validate an interception model that considers sub-grid heterogeneity and vegetation dynamics. A global, 40-year (1980–2019) interception dataset is generated at a daily temporal and 0.1° spatial resolution. This dataset will serve as a benchmark for future investigations of the global hydrological cycle.
Na Li, Sebastian Sippel, Alexander J. Winkler, Miguel D. Mahecha, Markus Reichstein, and Ana Bastos
Earth Syst. Dynam., 13, 1505–1533, https://doi.org/10.5194/esd-13-1505-2022, https://doi.org/10.5194/esd-13-1505-2022, 2022
Short summary
Short summary
Quantifying the imprint of large-scale atmospheric circulation dynamics and associated carbon cycle responses is key to improving our understanding of carbon cycle dynamics. Using a statistical model that relies on spatiotemporal sea level pressure as a proxy for large-scale atmospheric circulation, we quantify the fraction of interannual variability in atmospheric CO2 growth rate and the land CO2 sink that are driven by atmospheric circulation variability.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
Short summary
Short summary
Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
D. Montero, C. Aybar, M. D. Mahecha, and S. Wieneke
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVIII-4-W1-2022, 301–306, https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-301-2022, https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-301-2022, 2022
Lorenzo Alfieri, Francesco Avanzi, Fabio Delogu, Simone Gabellani, Giulia Bruno, Lorenzo Campo, Andrea Libertino, Christian Massari, Angelica Tarpanelli, Dominik Rains, Diego G. Miralles, Raphael Quast, Mariette Vreugdenhil, Huan Wu, and Luca Brocca
Hydrol. Earth Syst. Sci., 26, 3921–3939, https://doi.org/10.5194/hess-26-3921-2022, https://doi.org/10.5194/hess-26-3921-2022, 2022
Short summary
Short summary
This work shows advances in high-resolution satellite data for hydrology. We performed hydrological simulations for the Po River basin using various satellite products, including precipitation, evaporation, soil moisture, and snow depth. Evaporation and snow depth improved a simulation based on high-quality ground observations. Interestingly, a model calibration relying on satellite data skillfully reproduces observed discharges, paving the way to satellite-driven hydrological applications.
Sophia Walther, Simon Besnard, Jacob Allen Nelson, Tarek Sebastian El-Madany, Mirco Migliavacca, Ulrich Weber, Nuno Carvalhais, Sofia Lorena Ermida, Christian Brümmer, Frederik Schrader, Anatoly Stanislavovich Prokushkin, Alexey Vasilevich Panov, and Martin Jung
Biogeosciences, 19, 2805–2840, https://doi.org/10.5194/bg-19-2805-2022, https://doi.org/10.5194/bg-19-2805-2022, 2022
Short summary
Short summary
Satellite observations help interpret station measurements of local carbon, water, and energy exchange between the land surface and the atmosphere and are indispensable for simulations of the same in land surface models and their evaluation. We propose generalisable and efficient approaches to systematically ensure high quality and to estimate values in data gaps. We apply them to satellite data of surface reflectance and temperature with different resolutions at the stations.
Jessica Keune, Dominik L. Schumacher, and Diego G. Miralles
Geosci. Model Dev., 15, 1875–1898, https://doi.org/10.5194/gmd-15-1875-2022, https://doi.org/10.5194/gmd-15-1875-2022, 2022
Short summary
Short summary
Air transports moisture and heat, shaping the weather we experience. When and where was this air moistened and warmed by the surface? To address this question, atmospheric models trace the history of air parcels in space and time. However, their uncertainties remain unexplored, which hinders their utility and application. Here, we present a framework that sheds light on these uncertainties. Our approach sets a new standard in the assessment of atmospheric moisture and heat trajectories.
J. Pacheco-Labrador, U. Weber, X. Ma, M. D. Mahecha, N. Carvalhais, C. Wirth, A. Huth, F. J. Bohn, G. Kraemer, U. Heiden, FunDivEUROPE members, and M. Migliavacca
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVI-1-W1-2021, 49–55, https://doi.org/10.5194/isprs-archives-XLVI-1-W1-2021-49-2022, https://doi.org/10.5194/isprs-archives-XLVI-1-W1-2021-49-2022, 2022
Josephin Kroll, Jasper M. C. Denissen, Mirco Migliavacca, Wantong Li, Anke Hildebrandt, and Rene Orth
Biogeosciences, 19, 477–489, https://doi.org/10.5194/bg-19-477-2022, https://doi.org/10.5194/bg-19-477-2022, 2022
Short summary
Short summary
Plant growth relies on having access to energy (solar radiation) and water (soil moisture). This energy and water availability is impacted by weather extremes, like heat waves and droughts, which will occur more frequently in response to climate change. In this context, we analysed global satellite data to detect in which regions extreme plant growth is controlled by energy or water. We find that extreme plant growth is associated with temperature- or soil-moisture-related extremes.
Joaquín Muñoz-Sabater, Emanuel Dutra, Anna Agustí-Panareda, Clément Albergel, Gabriele Arduini, Gianpaolo Balsamo, Souhail Boussetta, Margarita Choulga, Shaun Harrigan, Hans Hersbach, Brecht Martens, Diego G. Miralles, María Piles, Nemesio J. Rodríguez-Fernández, Ervin Zsoter, Carlo Buontempo, and Jean-Noël Thépaut
Earth Syst. Sci. Data, 13, 4349–4383, https://doi.org/10.5194/essd-13-4349-2021, https://doi.org/10.5194/essd-13-4349-2021, 2021
Short summary
Short summary
The creation of ERA5-Land responds to a growing number of applications requiring global land datasets at a resolution higher than traditionally reached. ERA5-Land provides operational, global, and hourly key variables of the water and energy cycles over land surfaces, at 9 km resolution, from 1981 until the present. This work provides evidence of an overall improvement of the water cycle compared to previous reanalyses, whereas the energy cycle variables perform as well as those of ERA5.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
Short summary
Short summary
Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Christopher Krich, Mirco Migliavacca, Diego G. Miralles, Guido Kraemer, Tarek S. El-Madany, Markus Reichstein, Jakob Runge, and Miguel D. Mahecha
Biogeosciences, 18, 2379–2404, https://doi.org/10.5194/bg-18-2379-2021, https://doi.org/10.5194/bg-18-2379-2021, 2021
Short summary
Short summary
Ecosystems and the atmosphere interact with each other. These interactions determine e.g. the water and carbon fluxes and thus are crucial to understand climate change effects. We analysed the interactions for many ecosystems across the globe, showing that very different ecosystems can have similar interactions with the atmosphere. Meteorological conditions seem to be the strongest interaction-shaping factor. This means that common principles can be identified to describe ecosystem behaviour.
María P. González-Dugo, Xuelong Chen, Ana Andreu, Elisabet Carpintero, Pedro J. Gómez-Giraldez, Arnaud Carrara, and Zhongbo Su
Hydrol. Earth Syst. Sci., 25, 755–768, https://doi.org/10.5194/hess-25-755-2021, https://doi.org/10.5194/hess-25-755-2021, 2021
Short summary
Short summary
Drought is a devastating natural hazard and difficult to define, detect and quantify. Global meteorological data and remote-sensing products present new opportunities to characterize drought in an objective way. In this paper, we applied the surface energy balance model SEBS to estimate monthly evapotranspiration (ET) from 2001 to 2018 over the dehesa area of the Iberian Peninsula. ET anomalies were used to identify the main drought events and analyze their impacts on dehesa vegetation.
Jan Pisek, Angela Erb, Lauri Korhonen, Tobias Biermann, Arnaud Carrara, Edoardo Cremonese, Matthias Cuntz, Silvano Fares, Giacomo Gerosa, Thomas Grünwald, Niklas Hase, Michal Heliasz, Andreas Ibrom, Alexander Knohl, Johannes Kobler, Bart Kruijt, Holger Lange, Leena Leppänen, Jean-Marc Limousin, Francisco Ramon Lopez Serrano, Denis Loustau, Petr Lukeš, Lars Lundin, Riccardo Marzuoli, Meelis Mölder, Leonardo Montagnani, Johan Neirynck, Matthias Peichl, Corinna Rebmann, Eva Rubio, Margarida Santos-Reis, Crystal Schaaf, Marius Schmidt, Guillaume Simioni, Kamel Soudani, and Caroline Vincke
Biogeosciences, 18, 621–635, https://doi.org/10.5194/bg-18-621-2021, https://doi.org/10.5194/bg-18-621-2021, 2021
Short summary
Short summary
Understory vegetation is the most diverse, least understood component of forests worldwide. Understory communities are important drivers of overstory succession and nutrient cycling. Multi-angle remote sensing enables us to describe surface properties by means that are not possible when using mono-angle data. Evaluated over an extensive set of forest ecosystem experimental sites in Europe, our reported method can deliver good retrievals, especially over different forest types with open canopies.
Milan Flach, Alexander Brenning, Fabian Gans, Markus Reichstein, Sebastian Sippel, and Miguel D. Mahecha
Biogeosciences, 18, 39–53, https://doi.org/10.5194/bg-18-39-2021, https://doi.org/10.5194/bg-18-39-2021, 2021
Short summary
Short summary
Drought and heat events affect the uptake and sequestration of carbon in terrestrial ecosystems. We study the impact of droughts and heatwaves on the uptake of CO2 of different vegetation types at the global scale. We find that agricultural areas are generally strongly affected. Forests instead are not particularly sensitive to the events under scrutiny. This implies different water management strategies of forests but also a lack of sensitivity to remote-sensing-derived vegetation activity.
Hylke E. Beck, Ming Pan, Diego G. Miralles, Rolf H. Reichle, Wouter A. Dorigo, Sebastian Hahn, Justin Sheffield, Lanka Karthikeyan, Gianpaolo Balsamo, Robert M. Parinussa, Albert I. J. M. van Dijk, Jinyang Du, John S. Kimball, Noemi Vergopolan, and Eric F. Wood
Hydrol. Earth Syst. Sci., 25, 17–40, https://doi.org/10.5194/hess-25-17-2021, https://doi.org/10.5194/hess-25-17-2021, 2021
Short summary
Short summary
We evaluated the largest and most diverse set of surface soil moisture products ever evaluated in a single study. We found pronounced differences in performance among individual products and product groups. Our results provide guidance to choose the most suitable product for a particular application.
Giorgia Di Capua, Jakob Runge, Reik V. Donner, Bart van den Hurk, Andrew G. Turner, Ramesh Vellore, Raghavan Krishnan, and Dim Coumou
Weather Clim. Dynam., 1, 519–539, https://doi.org/10.5194/wcd-1-519-2020, https://doi.org/10.5194/wcd-1-519-2020, 2020
Short summary
Short summary
We study the interactions between the tropical convective activity and the mid-latitude circulation in the Northern Hemisphere during boreal summer. We identify two circumglobal wave patterns with phase shifts corresponding to the South Asian and the western North Pacific monsoon systems at an intra-seasonal timescale. These patterns show two-way interactions in a causal framework at a weekly timescale and assess how El Niño affects these interactions.
Brecht Martens, Dominik L. Schumacher, Hendrik Wouters, Joaquín Muñoz-Sabater, Niko E. C. Verhoest, and Diego G. Miralles
Geosci. Model Dev., 13, 4159–4181, https://doi.org/10.5194/gmd-13-4159-2020, https://doi.org/10.5194/gmd-13-4159-2020, 2020
Short summary
Short summary
Climate reanalyses are widely used in different fields and an in-depth evaluation of the different variables provided by reanalyses is a necessary means to provide feedback on the quality to their users and the operational centres producing these data sets. In this study, we show the improvements of ECMWF's latest climate reanalysis (ERA5) upon its predecessor (ERA-Interim) in partitioning the available energy at the land surface.
Daniel E. Pabon-Moreno, Talie Musavi, Mirco Migliavacca, Markus Reichstein, Christine Römermann, and Miguel D. Mahecha
Biogeosciences, 17, 3991–4006, https://doi.org/10.5194/bg-17-3991-2020, https://doi.org/10.5194/bg-17-3991-2020, 2020
Short summary
Short summary
Ecosystem CO2 uptake changes in time depending on climate conditions. In this study, we analyze how different climate variables affect the timing when CO2 uptake is at a maximum (DOYGPPmax). We found that the joint effects of radiation, temperature, and vapor pressure deficit are the most relevant controlling factors of DOYGPPmax and that if they increase, DOYGPPmax will happen earlier. These results help us to better understand how CO2 uptake could be affected by climate change.
Thomas Wutzler, Oscar Perez-Priego, Kendalynn Morris, Tarek S. El-Madany, and Mirco Migliavacca
Geosci. Instrum. Method. Data Syst., 9, 239–254, https://doi.org/10.5194/gi-9-239-2020, https://doi.org/10.5194/gi-9-239-2020, 2020
Short summary
Short summary
Continuous data of soil CO2 efflux can improve model prediction of climate warming, and automated data are becoming increasingly available. However, aggregating chamber-based data to plot scale pose challenges. Therefore, we showed, using 1 year of half-hourly data, how using the lognormal assumption tackles several challenges. We propose that plot-scale SO2 efflux observations should be reported together with lognormally based uncertainties and enter model constraining frameworks at log scale.
Guido Kraemer, Gustau Camps-Valls, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 17, 2397–2424, https://doi.org/10.5194/bg-17-2397-2020, https://doi.org/10.5194/bg-17-2397-2020, 2020
Short summary
Short summary
To closely monitor the state of our planet, we require systems that can monitor
the observation of many different properties at the same time. We create
indicators that resemble the behavior of many different simultaneous
observations. We apply the method to create indicators representing the
Earth's biosphere. The indicators show a productivity gradient and a water
gradient. The resulting indicators can detect a large number of changes and
extremes in the Earth system.
Barbara Marcolla, Mirco Migliavacca, Christian Rödenbeck, and Alessandro Cescatti
Biogeosciences, 17, 2365–2379, https://doi.org/10.5194/bg-17-2365-2020, https://doi.org/10.5194/bg-17-2365-2020, 2020
Short summary
Short summary
This work investigates the sensitivity of terrestrial CO2 fluxes to climate drivers. We observed that CO2 flux is mostly controlled by temperature during the growing season and by radiation off season. We also observe that radiation importance is increasing over time while sensitivity to temperature is decreasing in Eurasia. Ultimately this analysis shows that ecosystem response to climate is changing, with potential repercussions for future terrestrial sink and land role in climate mitigation.
Jian Peng, Simon Dadson, Feyera Hirpa, Ellen Dyer, Thomas Lees, Diego G. Miralles, Sergio M. Vicente-Serrano, and Chris Funk
Earth Syst. Sci. Data, 12, 753–769, https://doi.org/10.5194/essd-12-753-2020, https://doi.org/10.5194/essd-12-753-2020, 2020
Short summary
Short summary
Africa has been severely influenced by intense drought events, which has led to crop failure, food shortages, famine, epidemics and even mass migration. The current study developed a high spatial resolution drought dataset entirely from satellite-based products. The dataset has been comprehensively inter-compared with other drought indicators and may contribute to an improved characterization of drought risk and vulnerability and minimize drought's impact on water and food security in Africa.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
Short summary
Short summary
We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Miguel D. Mahecha, Fabian Gans, Gunnar Brandt, Rune Christiansen, Sarah E. Cornell, Normann Fomferra, Guido Kraemer, Jonas Peters, Paul Bodesheim, Gustau Camps-Valls, Jonathan F. Donges, Wouter Dorigo, Lina M. Estupinan-Suarez, Victor H. Gutierrez-Velez, Martin Gutwin, Martin Jung, Maria C. Londoño, Diego G. Miralles, Phillip Papastefanou, and Markus Reichstein
Earth Syst. Dynam., 11, 201–234, https://doi.org/10.5194/esd-11-201-2020, https://doi.org/10.5194/esd-11-201-2020, 2020
Short summary
Short summary
The ever-growing availability of data streams on different subsystems of the Earth brings unprecedented scientific opportunities. However, researching a data-rich world brings novel challenges. We present the concept of
Earth system data cubesto study the complex dynamics of multiple climate and ecosystem variables across space and time. Using a series of example studies, we highlight the potential of effectively considering the full multivariate nature of processes in the Earth system.
Nora Linscheid, Lina M. Estupinan-Suarez, Alexander Brenning, Nuno Carvalhais, Felix Cremer, Fabian Gans, Anja Rammig, Markus Reichstein, Carlos A. Sierra, and Miguel D. Mahecha
Biogeosciences, 17, 945–962, https://doi.org/10.5194/bg-17-945-2020, https://doi.org/10.5194/bg-17-945-2020, 2020
Short summary
Short summary
Vegetation typically responds to variation in temperature and rainfall within days. Yet seasonal changes in meteorological conditions, as well as decadal climate variability, additionally shape the state of ecosystems. It remains unclear how vegetation responds to climate variability on these different timescales. We find that the vegetation response to climate variability depends on the timescale considered. This scale dependency should be considered for modeling land–atmosphere interactions.
Javier Pacheco-Labrador, Tarek S. El-Madany, M. Pilar Martin, Rosario Gonzalez-Cascon, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Tiana Hammer, Heiko Moossen, Kathrin Henkel, Olaf Kolle, David Martini, Vicente Burchard, Christiaan van der Tol, Karl Segl, Markus Reichstein, and Mirco Migliavacca
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-501, https://doi.org/10.5194/bg-2019-501, 2020
Revised manuscript not accepted
Short summary
Short summary
The new generation of sensors on-board satellites have the potential to provide richer information about the function of vegetation than before. This information, nowadays missing, is fundamental to improve our understanding and prediction of carbon and water cycles, and therefore to anticipate effects and responses to Climate Change. In this manuscript we propose a method to exploit the data provided by these satellites to successfully obtain this information key to face Climate Change.
Jeroen Claessen, Annalisa Molini, Brecht Martens, Matteo Detto, Matthias Demuzere, and Diego G. Miralles
Biogeosciences, 16, 4851–4874, https://doi.org/10.5194/bg-16-4851-2019, https://doi.org/10.5194/bg-16-4851-2019, 2019
Short summary
Short summary
Bidirectional interactions between vegetation and climate are unraveled over short (monthly) and long (inter-annual) temporal scales. Analyses use a novel causal inference method based on wavelet theory. The performance of climate models at representing these interactions is benchmarked against satellite data. Climate models can reproduce the overall climate controls on vegetation at all temporal scales, while their performance at representing biophysical feedbacks on climate is less adequate.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
Short summary
Short summary
Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Vicente Burchard-Levine, Héctor Nieto, David Riaño, Mirco Migliavacca, Tarek S. El-Madany, Oscar Perez-Priego, Arnaud Carrara, and M. Pilar Martín
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2019-354, https://doi.org/10.5194/hess-2019-354, 2019
Manuscript not accepted for further review
Short summary
Short summary
Models are increasingly being used to understand surface water fluxes, which are of high use to manage crop irrigation, and to understand the earth system´s response to environmental change. However, often these models have higher uncertainty in complex ecosystems with multiple layers of vegetation. This manuscript adapts and analyzes a well known model to better simulate water fluxes for a savanna-like ecosystem and to understand the influence that vegetation has on their predictions.
Hendrik Wouters, Irina Y. Petrova, Chiel C. van Heerwaarden, Jordi Vilà-Guerau de Arellano, Adriaan J. Teuling, Vicky Meulenberg, Joseph A. Santanello, and Diego G. Miralles
Geosci. Model Dev., 12, 2139–2153, https://doi.org/10.5194/gmd-12-2139-2019, https://doi.org/10.5194/gmd-12-2139-2019, 2019
Short summary
Short summary
The free software CLASS4GL (http://class4gl.eu) is designed to investigate the dynamic atmospheric boundary layer (ABL) with weather balloons. It mines observational data from global radio soundings, satellite and reanalysis data from the last 40 years to constrain and initialize an ABL model and automizes multiple experiments in parallel. CLASS4GL aims at fostering a better understanding of land–atmosphere feedbacks and the drivers of extreme weather.
Richard K. F. Nair, Kendalynn A. Morris, Martin Hertel, Yunpeng Luo, Gerardo Moreno, Markus Reichstein, Marion Schrumpf, and Mirco Migliavacca
Biogeosciences, 16, 1883–1901, https://doi.org/10.5194/bg-16-1883-2019, https://doi.org/10.5194/bg-16-1883-2019, 2019
Short summary
Short summary
We investigated how nutrient availability affects seasonal timing of root growth and death in a Spanish savanna, adapted to a long summer drought. We found that nitrogen (N) additions led to more root biomass but number of roots was higher with N and phosphorus together. These effects were strongly affected by the time of year. In autumn root growth occurred after leaf production. This has implications for how we understand biomass production and carbon uptake in these systems.
Biagio Di Mauro, Roberto Garzonio, Micol Rossini, Gianluca Filippa, Paolo Pogliotti, Marta Galvagno, Umberto Morra di Cella, Mirco Migliavacca, Giovanni Baccolo, Massimiliano Clemenza, Barbara Delmonte, Valter Maggi, Marie Dumont, François Tuzet, Matthieu Lafaysse, Samuel Morin, Edoardo Cremonese, and Roberto Colombo
The Cryosphere, 13, 1147–1165, https://doi.org/10.5194/tc-13-1147-2019, https://doi.org/10.5194/tc-13-1147-2019, 2019
Short summary
Short summary
The snow albedo reduction due to dust from arid regions alters the melting dynamics of the snowpack, resulting in earlier snowmelt. We estimate up to 38 days of anticipated snow disappearance for a season that was characterized by a strong dust deposition event. This process has a series of further impacts. For example, earlier snowmelts may alter the hydrological cycle in the Alps, induce higher sensitivity to late summer drought, and finally impact vegetation and animal phenology.
Wouter H. Maes, Pierre Gentine, Niko E. C. Verhoest, and Diego G. Miralles
Hydrol. Earth Syst. Sci., 23, 925–948, https://doi.org/10.5194/hess-23-925-2019, https://doi.org/10.5194/hess-23-925-2019, 2019
Short summary
Short summary
Potential evaporation (Ep) is the amount of water an ecosystem would consume if it were not limited by water availability or other stress factors. In this study, we compared several methods to estimate Ep using a global dataset of 107 FLUXNET sites. A simple radiation-driven method calibrated per biome consistently outperformed more complex approaches and makes a suitable tool to investigate the impact of water use and demand, drought severity and biome productivity.
Boaz Hilman, Jan Muhr, Susan E. Trumbore, Norbert Kunert, Mariah S. Carbone, Päivi Yuval, S. Joseph Wright, Gerardo Moreno, Oscar Pérez-Priego, Mirco Migliavacca, Arnaud Carrara, José M. Grünzweig, Yagil Osem, Tal Weiner, and Alon Angert
Biogeosciences, 16, 177–191, https://doi.org/10.5194/bg-16-177-2019, https://doi.org/10.5194/bg-16-177-2019, 2019
Short summary
Short summary
Combined measurement of CO2 / O2 fluxes in tree stems suggested that on average 41 % of the respired CO2 was not emitted locally to the atmosphere. This finding strengthens the recognition that CO2 efflux from tree stems is not an accurate measure of respiration. The CO2 / O2 fluxes did not vary as expected if CO2 dissolution in the xylem sap was the main driver for the CO2 retention. We suggest the examination of refixation of respired CO2 as a possible mechanism for CO2 retention.
Milan Flach, Sebastian Sippel, Fabian Gans, Ana Bastos, Alexander Brenning, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 15, 6067–6085, https://doi.org/10.5194/bg-15-6067-2018, https://doi.org/10.5194/bg-15-6067-2018, 2018
Short summary
Short summary
Northern forests enhanced their productivity during and before the 2010 Russian mega heatwave. We scrutinize this issue with a novel type of multivariate extreme event detection approach. Forests compensate for 54 % of the carbon losses in agricultural ecosystems due to vulnerable conditions in spring and better water management in summer. The findings highlight the importance of forests in mitigating climate change, while not alleviating the consequences of extreme events for food security.
Christina Papagiannopoulou, Diego G. Miralles, Matthias Demuzere, Niko E. C. Verhoest, and Willem Waegeman
Geosci. Model Dev., 11, 4139–4153, https://doi.org/10.5194/gmd-11-4139-2018, https://doi.org/10.5194/gmd-11-4139-2018, 2018
Short summary
Short summary
Common global land cover and climate classifications are based on vegetation–climatic characteristics derived from observational data, ignoring the interaction between the local climate and biome. Here, we model the interplay between vegetation and local climate by discovering spatial relationships among different locations. The resulting global
hydro-climatic biomescorrespond to regions of coherent climate–vegetation interactions that agree well with traditional global land cover maps.
Carlos Jiménez, Brecht Martens, Diego M. Miralles, Joshua B. Fisher, Hylke E. Beck, and Diego Fernández-Prieto
Hydrol. Earth Syst. Sci., 22, 4513–4533, https://doi.org/10.5194/hess-22-4513-2018, https://doi.org/10.5194/hess-22-4513-2018, 2018
Short summary
Short summary
Observing the amount of water evaporated in nature is not easy, and we need to combine accurate local measurements with estimates from satellites, more uncertain but covering larger areas. This is the main topic of our paper, in which local observations are compared with global land evaporation estimates, followed by a weighting of the global observations based on this comparison to attempt derive a more accurate evaporation product.
Thomas Wutzler, Antje Lucas-Moffat, Mirco Migliavacca, Jürgen Knauer, Kerstin Sickel, Ladislav Šigut, Olaf Menzer, and Markus Reichstein
Biogeosciences, 15, 5015–5030, https://doi.org/10.5194/bg-15-5015-2018, https://doi.org/10.5194/bg-15-5015-2018, 2018
Short summary
Short summary
Net fluxes of carbon dioxide at the ecosystem level measured by eddy covariance are a main source for understanding biosphere–atmosphere interactions. However, there is a need for more usable and extensible tools for post-processing steps of the half-hourly flux data. Therefore, we developed the REddyProc package, providing data filtering, gap filling, and flux partitioning. The extensible functions are compatible with state-of-the-art tools but allow easier integration in extended analysis.
Paul Bodesheim, Martin Jung, Fabian Gans, Miguel D. Mahecha, and Markus Reichstein
Earth Syst. Sci. Data, 10, 1327–1365, https://doi.org/10.5194/essd-10-1327-2018, https://doi.org/10.5194/essd-10-1327-2018, 2018
Short summary
Short summary
We provide continuous half-hourly carbon and energy fluxes for 2001 to 2014 at 0.5° spatial resolution, which allows for analyzing diurnal cycles globally. The data set contains four fluxes: gross primary production (GPP), net ecosystem exchange (NEE), latent heat (LE), and sensible heat (H). In addition, we provide a derived product that only contains monthly average diurnal cycles but which also enables us to study the important characteristics of subdaily patterns at a global scale.
Jacob A. Nelson, Nuno Carvalhais, Mirco Migliavacca, Markus Reichstein, and Martin Jung
Biogeosciences, 15, 2433–2447, https://doi.org/10.5194/bg-15-2433-2018, https://doi.org/10.5194/bg-15-2433-2018, 2018
Short summary
Short summary
Plants have typical daily carbon uptake and water loss cycles. However, these cycles may change under periods of duress, such as water limitation. Here we identify two types of patterns in response to water limitations: a tendency to lose more water in the morning than afternoon and a decoupling of the carbon and water cycles. The findings show differences in responses by trees and grasses and suggest that morning shifts may be more efficient at gaining carbon per unit water used.
Jannis von Buttlar, Jakob Zscheischler, Anja Rammig, Sebastian Sippel, Markus Reichstein, Alexander Knohl, Martin Jung, Olaf Menzer, M. Altaf Arain, Nina Buchmann, Alessandro Cescatti, Damiano Gianelle, Gerard Kiely, Beverly E. Law, Vincenzo Magliulo, Hank Margolis, Harry McCaughey, Lutz Merbold, Mirco Migliavacca, Leonardo Montagnani, Walter Oechel, Marian Pavelka, Matthias Peichl, Serge Rambal, Antonio Raschi, Russell L. Scott, Francesco P. Vaccari, Eva van Gorsel, Andrej Varlagin, Georg Wohlfahrt, and Miguel D. Mahecha
Biogeosciences, 15, 1293–1318, https://doi.org/10.5194/bg-15-1293-2018, https://doi.org/10.5194/bg-15-1293-2018, 2018
Short summary
Short summary
Our work systematically quantifies extreme heat and drought event impacts on gross primary productivity (GPP) and ecosystem respiration globally across a wide range of ecosystems. We show that heat extremes typically increased mainly respiration whereas drought decreased both fluxes. Combined heat and drought extremes had opposing effects offsetting each other for respiration, but there were also strong reductions in GPP and hence the strongest reductions in the ecosystems carbon sink capacity.
Wouter H. Maes, Pierre Gentine, Niko E. C. Verhoest, and Diego G. Miralles
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2017-682, https://doi.org/10.5194/hess-2017-682, 2018
Revised manuscript not accepted
Short summary
Short summary
Potential evaporation is a key parameter in numerous models used for assessing water use and drought severity. Yet, multiple incompatible methods have been proposed, thus estimates of potential evaporation remain uncertain. Based on the largest available dataset of FLUXNET data, we identify the best method to calculate potential evaporation globally. A simple radiation-driven method calibrated per biome consistently performed best; more complex models did not perform as good.
Iulia Ilie, Peter Dittrich, Nuno Carvalhais, Martin Jung, Andreas Heinemeyer, Mirco Migliavacca, James I. L. Morison, Sebastian Sippel, Jens-Arne Subke, Matthew Wilkinson, and Miguel D. Mahecha
Geosci. Model Dev., 10, 3519–3545, https://doi.org/10.5194/gmd-10-3519-2017, https://doi.org/10.5194/gmd-10-3519-2017, 2017
Short summary
Short summary
Accurate representation of land-atmosphere carbon fluxes is essential for future climate projections, although some of the responses of CO2 fluxes to climate often remain uncertain. The increase in available data allows for new approaches in their modelling. We automatically developed models for ecosystem and soil carbon respiration using a machine learning approach. When compared with established respiration models, we found that they are better in prediction as well as offering new insights.
Miguel D. Mahecha, Fabian Gans, Sebastian Sippel, Jonathan F. Donges, Thomas Kaminski, Stefan Metzger, Mirco Migliavacca, Dario Papale, Anja Rammig, and Jakob Zscheischler
Biogeosciences, 14, 4255–4277, https://doi.org/10.5194/bg-14-4255-2017, https://doi.org/10.5194/bg-14-4255-2017, 2017
Short summary
Short summary
We investigate the likelihood of ecological in situ networks to detect and monitor the impact of extreme events in the terrestrial biosphere.
Seyed Hamed Alemohammad, Bin Fang, Alexandra G. Konings, Filipe Aires, Julia K. Green, Jana Kolassa, Diego Miralles, Catherine Prigent, and Pierre Gentine
Biogeosciences, 14, 4101–4124, https://doi.org/10.5194/bg-14-4101-2017, https://doi.org/10.5194/bg-14-4101-2017, 2017
Short summary
Short summary
Water, Energy, and Carbon with Artificial Neural Networks (WECANN) is a statistically based estimate of global surface latent and sensible heat fluxes and gross primary productivity. The retrieval uses six remotely sensed observations as input, including the solar-induced fluorescence. WECANN provides estimates on a 1° × 1° geographic grid and on a monthly time scale and outperforms other global products in capturing the seasonality of the fluxes when compared to eddy covariance tower data.
Jakob Zscheischler, Miguel D. Mahecha, Valerio Avitabile, Leonardo Calle, Nuno Carvalhais, Philippe Ciais, Fabian Gans, Nicolas Gruber, Jens Hartmann, Martin Herold, Kazuhito Ichii, Martin Jung, Peter Landschützer, Goulven G. Laruelle, Ronny Lauerwald, Dario Papale, Philippe Peylin, Benjamin Poulter, Deepak Ray, Pierre Regnier, Christian Rödenbeck, Rosa M. Roman-Cuesta, Christopher Schwalm, Gianluca Tramontana, Alexandra Tyukavina, Riccardo Valentini, Guido van der Werf, Tristram O. West, Julie E. Wolf, and Markus Reichstein
Biogeosciences, 14, 3685–3703, https://doi.org/10.5194/bg-14-3685-2017, https://doi.org/10.5194/bg-14-3685-2017, 2017
Short summary
Short summary
Here we synthesize a wide range of global spatiotemporal observational data on carbon exchanges between the Earth surface and the atmosphere. A key challenge was to consistently combining observational products of terrestrial and aquatic surfaces. Our primary goal is to identify today’s key uncertainties and observational shortcomings that would need to be addressed in future measurement campaigns or expansions of in situ observatories.
Milan Flach, Fabian Gans, Alexander Brenning, Joachim Denzler, Markus Reichstein, Erik Rodner, Sebastian Bathiany, Paul Bodesheim, Yanira Guanche, Sebastian Sippel, and Miguel D. Mahecha
Earth Syst. Dynam., 8, 677–696, https://doi.org/10.5194/esd-8-677-2017, https://doi.org/10.5194/esd-8-677-2017, 2017
Short summary
Short summary
Anomalies and extremes are often detected using univariate peak-over-threshold approaches in the geoscience community. The Earth system is highly multivariate. We compare eight multivariate anomaly detection algorithms and combinations of data preprocessing. We identify three anomaly detection algorithms that outperform univariate extreme event detection approaches. The workflows have the potential to reveal novelties in data. Remarks on their application to real Earth observations are provided.
Matthew F. McCabe, Matthew Rodell, Douglas E. Alsdorf, Diego G. Miralles, Remko Uijlenhoet, Wolfgang Wagner, Arko Lucieer, Rasmus Houborg, Niko E. C. Verhoest, Trenton E. Franz, Jiancheng Shi, Huilin Gao, and Eric F. Wood
Hydrol. Earth Syst. Sci., 21, 3879–3914, https://doi.org/10.5194/hess-21-3879-2017, https://doi.org/10.5194/hess-21-3879-2017, 2017
Short summary
Short summary
We examine the opportunities and challenges that technological advances in Earth observation will present to the hydrological community. From advanced space-based sensors to unmanned aerial vehicles and ground-based distributed networks, these emergent systems are set to revolutionize our understanding and interpretation of hydrological and related processes.
Sebastian Sippel, Jakob Zscheischler, Miguel D. Mahecha, Rene Orth, Markus Reichstein, Martha Vogel, and Sonia I. Seneviratne
Earth Syst. Dynam., 8, 387–403, https://doi.org/10.5194/esd-8-387-2017, https://doi.org/10.5194/esd-8-387-2017, 2017
Short summary
Short summary
The present study (1) evaluates land–atmosphere coupling in the CMIP5 multi-model ensemble against an ensemble of benchmarking datasets and (2) refines the model ensemble using a land–atmosphere coupling diagnostic as constraint. Our study demonstrates that a considerable fraction of coupled climate models overemphasize warm-season
moisture-limitedclimate regimes in midlatitude regions. This leads to biases in daily-scale temperature extremes, which are alleviated in a constrained ensemble.
Brecht Martens, Diego G. Miralles, Hans Lievens, Robin van der Schalie, Richard A. M. de Jeu, Diego Fernández-Prieto, Hylke E. Beck, Wouter A. Dorigo, and Niko E. C. Verhoest
Geosci. Model Dev., 10, 1903–1925, https://doi.org/10.5194/gmd-10-1903-2017, https://doi.org/10.5194/gmd-10-1903-2017, 2017
Short summary
Short summary
Terrestrial evaporation is a key component of the hydrological cycle and reliable data sets of this variable are of major importance. The Global Land Evaporation Amsterdam Model (GLEAM, www.GLEAM.eu) is a set of algorithms which estimates evaporation based on satellite observations. The third version of GLEAM, presented in this study, includes an improved parameterization of different model components. As a result, the accuracy of the GLEAM data sets has been improved upon previous versions.
Christina Papagiannopoulou, Diego G. Miralles, Stijn Decubber, Matthias Demuzere, Niko E. C. Verhoest, Wouter A. Dorigo, and Willem Waegeman
Geosci. Model Dev., 10, 1945–1960, https://doi.org/10.5194/gmd-10-1945-2017, https://doi.org/10.5194/gmd-10-1945-2017, 2017
Short summary
Short summary
Global satellite observations provide a means to unravel the influence of climate on vegetation. Common statistical methods used to study the relationships between climate and vegetation are often too simplistic to capture the complexity of these relationships. Here, we present a novel causality framework that includes data fusion from various databases, time series decomposition, and machine learning techniques. Results highlight the highly non-linear nature of climate–vegetation interactions.
Sebastian Sippel, Jakob Zscheischler, Martin Heimann, Holger Lange, Miguel D. Mahecha, Geert Jan van Oldenborgh, Friederike E. L. Otto, and Markus Reichstein
Hydrol. Earth Syst. Sci., 21, 441–458, https://doi.org/10.5194/hess-21-441-2017, https://doi.org/10.5194/hess-21-441-2017, 2017
Short summary
Short summary
The paper re-investigates the question whether observed precipitation extremes and annual totals have been increasing in the world's dry regions over the last 60 years. Despite recently postulated increasing trends, we demonstrate that large uncertainties prevail due to (1) the choice of dryness definition and (2) statistical data processing. In fact, we find only minor (and only some significant) increases if (1) dryness is based on aridity and (2) statistical artefacts are accounted for.
D. Michel, C. Jiménez, D. G. Miralles, M. Jung, M. Hirschi, A. Ershadi, B. Martens, M. F. McCabe, J. B. Fisher, Q. Mu, S. I. Seneviratne, E. F. Wood, and D. Fernández-Prieto
Hydrol. Earth Syst. Sci., 20, 803–822, https://doi.org/10.5194/hess-20-803-2016, https://doi.org/10.5194/hess-20-803-2016, 2016
Short summary
Short summary
In this study a common reference input data set from satellite and in situ data is used to run four established evapotranspiration (ET) algorithms using sub-daily and daily input on a tower scale as a testbed for a global ET product. The PT-JPL model and GLEAM provide the best performance for satellite and in situ forcing as well as for the different temporal resolutions. PM-MOD and SEBS perform less well: the PM-MOD model generally underestimates, while SEBS generally overestimates ET.
S. Sippel, F. E. L. Otto, M. Forkel, M. R. Allen, B. P. Guillod, M. Heimann, M. Reichstein, S. I. Seneviratne, K. Thonicke, and M. D. Mahecha
Earth Syst. Dynam., 7, 71–88, https://doi.org/10.5194/esd-7-71-2016, https://doi.org/10.5194/esd-7-71-2016, 2016
Short summary
Short summary
We introduce a novel technique to bias correct climate model output for impact simulations that preserves its physical consistency and multivariate structure. The methodology considerably improves the representation of extremes in climatic variables relative to conventional bias correction strategies. Illustrative simulations of biosphere–atmosphere carbon and water fluxes with a biosphere model (LPJmL) show that the novel technique can be usefully applied to drive climate impact models.
M. F. McCabe, A. Ershadi, C. Jimenez, D. G. Miralles, D. Michel, and E. F. Wood
Geosci. Model Dev., 9, 283–305, https://doi.org/10.5194/gmd-9-283-2016, https://doi.org/10.5194/gmd-9-283-2016, 2016
Short summary
Short summary
In an effort to develop a global terrestrial evaporation product, four models were forced using both a tower and grid-based data set. Comparisons against flux-tower observations from different biome and land cover types show considerable inter-model variability and sensitivity to forcing type. Results suggest that no single model is able to capture expected flux patterns and response. It is suggested that a multi-model ensemble is likely to provide a more stable long-term flux estimate.
B. Di Mauro, F. Fava, P. Frattini, A. Camia, R. Colombo, and M. Migliavacca
Nonlin. Processes Geophys. Discuss., https://doi.org/10.5194/npgd-2-1553-2015, https://doi.org/10.5194/npgd-2-1553-2015, 2015
Preprint withdrawn
Short summary
Short summary
In this paper, we analyse the probability distribution of wildfires burned area at European scale. We evaluate the performance of a land surface model using power law scaling as a benchmark. Our analysis suggests that only high latitude biomes are described by a power law distribution, and we relate this feature with the less impact of antrhopogenic activity. The benchmarking analysis showed that some refinements are needed in the model structure for reproducing emerging properties of wildfires
O. Perez-Priego, J. Guan, M. Rossini, F. Fava, T. Wutzler, G. Moreno, N. Carvalhais, A. Carrara, O. Kolle, T. Julitta, M. Schrumpf, M. Reichstein, and M. Migliavacca
Biogeosciences, 12, 6351–6367, https://doi.org/10.5194/bg-12-6351-2015, https://doi.org/10.5194/bg-12-6351-2015, 2015
Short summary
Short summary
Sun-induced chlorophyll fluorescence and photochemical reflectance index revealed controls of climate and nutrient availability on photosynthesis (gross primary production, GPP). Meteo-driven models (MMs) were unable to describe nutrient-induced effects on GPP. Important implications can be derived from these results, and uncertainties in the prediction of global GPP still remain when MMs do not account for plant nutrient availability.
L. Wingate, J. Ogée, E. Cremonese, G. Filippa, T. Mizunuma, M. Migliavacca, C. Moisy, M. Wilkinson, C. Moureaux, G. Wohlfahrt, A. Hammerle, L. Hörtnagl, C. Gimeno, A. Porcar-Castell, M. Galvagno, T. Nakaji, J. Morison, O. Kolle, A. Knohl, W. Kutsch, P. Kolari, E. Nikinmaa, A. Ibrom, B. Gielen, W. Eugster, M. Balzarolo, D. Papale, K. Klumpp, B. Köstner, T. Grünwald, R. Joffre, J.-M. Ourcival, M. Hellstrom, A. Lindroth, C. George, B. Longdoz, B. Genty, J. Levula, B. Heinesch, M. Sprintsin, D. Yakir, T. Manise, D. Guyon, H. Ahrends, A. Plaza-Aguilar, J. H. Guan, and J. Grace
Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, https://doi.org/10.5194/bg-12-5995-2015, 2015
Short summary
Short summary
The timing of plant development stages and their response to climate and management were investigated using a network of digital cameras installed across different European ecosystems. Using the relative red, green and blue content of images we showed that the green signal could be used to estimate the length of the growing season in broadleaf forests. We also developed a model that predicted the seasonal variations of camera RGB signals and how they relate to leaf pigment content and area well.
A. I. Stegehuis, R. Vautard, P. Ciais, A. J. Teuling, D. G. Miralles, and M. Wild
Geosci. Model Dev., 8, 2285–2298, https://doi.org/10.5194/gmd-8-2285-2015, https://doi.org/10.5194/gmd-8-2285-2015, 2015
Short summary
Short summary
Many climate models have difficulties in properly reproducing climate extremes such as heat wave conditions. We use a regional climate model with different atmospheric physics schemes to simulate the heat wave events of 2003 in western Europe and 2010 in Russia. The five best-performing and diverse physics scheme combinations may be used in the future to perform heat wave analysis and to investigate the impact of climate change in summer in Europe.
S. Hashimoto, N. Carvalhais, A. Ito, M. Migliavacca, K. Nishina, and M. Reichstein
Biogeosciences, 12, 4121–4132, https://doi.org/10.5194/bg-12-4121-2015, https://doi.org/10.5194/bg-12-4121-2015, 2015
M. G. De Kauwe, J. Kala, Y.-S. Lin, A. J. Pitman, B. E. Medlyn, R. A. Duursma, G. Abramowitz, Y.-P. Wang, and D. G. Miralles
Geosci. Model Dev., 8, 431–452, https://doi.org/10.5194/gmd-8-431-2015, https://doi.org/10.5194/gmd-8-431-2015, 2015
Short summary
Short summary
Stomatal conductance affects the fluxes of carbon, energy and water between the vegetated land surface and the atmosphere. We test an implementation of an optimal stomatal conductance model within the CABLE land surface model (LSM). The new implementation resulted in a large reduction in the annual fluxes of transpiration across evergreen needleleaf, tundra and C4 grass regions. We conclude that optimisation theory can yield a tractable approach to predicting stomatal conductance in LSMs.
A. Rammig, M. Wiedermann, J. F. Donges, F. Babst, W. von Bloh, D. Frank, K. Thonicke, and M. D. Mahecha
Biogeosciences, 12, 373–385, https://doi.org/10.5194/bg-12-373-2015, https://doi.org/10.5194/bg-12-373-2015, 2015
M. Forkel, N. Carvalhais, S. Schaphoff, W. v. Bloh, M. Migliavacca, M. Thurner, and K. Thonicke
Biogeosciences, 11, 7025–7050, https://doi.org/10.5194/bg-11-7025-2014, https://doi.org/10.5194/bg-11-7025-2014, 2014
B. P. Guillod, B. Orlowsky, D. Miralles, A. J. Teuling, P. D. Blanken, N. Buchmann, P. Ciais, M. Ek, K. L. Findell, P. Gentine, B. R. Lintner, R. L. Scott, B. Van den Hurk, and S. I. Seneviratne
Atmos. Chem. Phys., 14, 8343–8367, https://doi.org/10.5194/acp-14-8343-2014, https://doi.org/10.5194/acp-14-8343-2014, 2014
X. Wu, F. Babst, P. Ciais, D. Frank, M. Reichstein, M. Wattenbach, C. Zang, and M. D. Mahecha
Biogeosciences, 11, 3057–3068, https://doi.org/10.5194/bg-11-3057-2014, https://doi.org/10.5194/bg-11-3057-2014, 2014
J. Zscheischler, M. Reichstein, S. Harmeling, A. Rammig, E. Tomelleri, and M. D. Mahecha
Biogeosciences, 11, 2909–2924, https://doi.org/10.5194/bg-11-2909-2014, https://doi.org/10.5194/bg-11-2909-2014, 2014
C. F. Schleussner, J. Runge, J. Lehmann, and A. Levermann
Earth Syst. Dynam., 5, 103–115, https://doi.org/10.5194/esd-5-103-2014, https://doi.org/10.5194/esd-5-103-2014, 2014
J. v. Buttlar, J. Zscheischler, and M. D. Mahecha
Nonlin. Processes Geophys., 21, 203–215, https://doi.org/10.5194/npg-21-203-2014, https://doi.org/10.5194/npg-21-203-2014, 2014
B. Mueller, M. Hirschi, C. Jimenez, P. Ciais, P. A. Dirmeyer, A. J. Dolman, J. B. Fisher, M. Jung, F. Ludwig, F. Maignan, D. G. Miralles, M. F. McCabe, M. Reichstein, J. Sheffield, K. Wang, E. F. Wood, Y. Zhang, and S. I. Seneviratne
Hydrol. Earth Syst. Sci., 17, 3707–3720, https://doi.org/10.5194/hess-17-3707-2013, https://doi.org/10.5194/hess-17-3707-2013, 2013
Related subject area
Biogeochemistry: Air - Land Exchange
Altered seasonal sensitivity of net ecosystem exchange to controls driven by nutrient balances in a semi-arid savanna
Peltigera lichen thalli produce highly potent ice-nucleating agents
Constraining 2010–2020 Amazonian carbon flux estimates with satellite solar-induced fluorescence (SIF)
Does increased spatial replication above heterogeneous agroforestry improve the representativeness of eddy covariance measurements?
An elucidatory model of oxygen's partial pressure inside substomatal cavities
Aggregation of ice-nucleating macromolecules from Betula pendula pollen determines ice nucleation efficiency
Quantifying the soil sink of atmospheric Hydrogen: a full year of field measurements from grassland and forest soils in the UK
Evaluating adsorption isotherm models for determining the partitioning of ammonium between soil and soil pore water in environmental soil samples
Similar freezing spectra of particles in plant canopies and in the air at a high-altitude site
Anticorrelation of net uptake of atmospheric CO2 by the world ocean and terrestrial biosphere in current carbon cycle models
Impact of meteorological conditions on the biogenic volatile organic compound (BVOC) emission rate from eastern Mediterranean vegetation under drought
Monitoring cropland daily carbon dioxide exchange at field scales with Sentinel-2 satellite imagery
Compound soil and atmospheric drought (CSAD) events and CO2 fluxes of a mixed deciduous forest: the occurrence, impact, and temporal contribution of main drivers
Potential of carbon uptake and local aerosol production in boreal and hemi-boreal ecosystems across Finland and in Estonia
The influence of plant water stress on vegetation–atmosphere exchanges: implications for ozone modelling
High interspecific variability in ice nucleation activity suggests pollen ice nucleators are incidental
Using automated machine learning for the upscaling of gross primary productivity
Interpretability of negative latent heat fluxes from eddy covariance measurements in dry conditions
Forest-floor respiration, N2O fluxes, and CH4 fluxes in a subalpine spruce forest: drivers and annual budgets
Enhanced net CO2 exchange of a semideciduous forest in the southern Amazon due to diffuse radiation from biomass burning
Observational relationships between ammonia, carbon dioxide and water vapor under a wide range of meteorological and turbulent conditions: RITA-2021 campaign
Environmental controls of winter soil carbon dioxide fluxes in boreal and tundra environments
Origin of secondary fatty alcohols in atmospheric aerosols in a cool–temperate forest based on their mass size distributions
Sap flow and leaf gas exchange response to a drought and heatwave in urban green spaces in a Nordic city
Changes in biogenic volatile organic compound emissions in response to the El Niño–Southern Oscillation
Rethinking the deployment of static chambers for CO2 flux measurement in dry desert soils
Lichen species across Alaska produce highly active and stable ice nucleators
A differentiable, physics-informed ecosystem modeling and learning framework for large-scale inverse problems: demonstration with photosynthesis simulations
Snow–vegetation–atmosphere interactions in alpine tundra
Synergy between TROPOMI sun-induced chlorophyll fluorescence and MODIS spectral reflectance for understanding the dynamics of gross primary productivity at Integrated Carbon Observatory System (ICOS) ecosystem flux sites
Atmospheric deposition of reactive nitrogen to a deciduous forest in the southern Appalachian Mountains
Tropical cyclones facilitate recovery of forest leaf area from dry spells in East Asia
Minor contributions of daytime monoterpenes are major contributors to atmospheric reactivity
Using atmospheric observations to quantify annual biogenic carbon dioxide fluxes on the Alaska North Slope
Forest–atmosphere exchange of reactive nitrogen in a remote region – Part II: Modeling annual budgets
Growth and actual leaf temperature modulate CO2 responsiveness of monoterpene emissions from holm oak in opposite ways
Multi-year observations reveal a larger than expected autumn respiration signal across northeast Eurasia
Reviews and syntheses: VOC emissions from soil cover in boreal and temperate natural ecosystems of the Northern Hemisphere
Internal tree cycling and atmospheric archiving of mercury: examination with concentration and stable isotope analyses
Contrasting drought legacy effects on gross primary productivity in a mixed versus pure beech forest
CO2 and CH4 exchanges between moist moss tundra and atmosphere on Kapp Linné, Svalbard
Recent extreme drought events in the Amazon rainforest: assessment of different precipitation and evapotranspiration datasets and drought indicators
Variability and uncertainty in flux-site-scale net ecosystem exchange simulations based on machine learning and remote sensing: a systematic evaluation
Update of a biogeochemical model with process-based algorithms to predict ammonia volatilization from fertilized cultivated uplands and rice paddy fields
Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment
Climatic variation drives loss and restructuring of carbon and nitrogen in boreal forest wildfire
Gaps in network infrastructure limit our understanding of biogenic methane emissions for the United States
Changes of the aerodynamic characteristics of a flux site after an extensive windthrow
Carbon sequestration potential of street tree plantings in Helsinki
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Laura Nadolski, Tarek S. El-Madany, Jacob Nelson, Arnaud Carrara, Gerardo Moreno, Richard Nair, Yunpeng Luo, Anke Hildebrandt, Victor Rolo, Markus Reichstein, and Sung-Ching Lee
Biogeosciences, 22, 2935–2958, https://doi.org/10.5194/bg-22-2935-2025, https://doi.org/10.5194/bg-22-2935-2025, 2025
Short summary
Short summary
Semi-arid ecosystems are crucial for Earth's carbon balance and are sensitive to changes in nitrogen (N) and phosphorus (P) levels. Their carbon dynamics are complex and not fully understood. We studied how long-term nutrient changes affect carbon exchange. In summer, the addition of N+P changed plant composition and productivity. In transitional seasons, carbon exchange was less weather-dependent with N. The addition of N and N+P increases carbon-exchange variability, driven by grass greenness.
Rosemary J. Eufemio, Galit Renzer, Mariah Rojas, Jolanta Miadlikowska, Todd L. Sformo, François Lutzoni, Boris A. Vinatzer, and Konrad Meister
Biogeosciences, 22, 2087–2096, https://doi.org/10.5194/bg-22-2087-2025, https://doi.org/10.5194/bg-22-2087-2025, 2025
Short summary
Short summary
Biological ice nucleation plays key roles in organism survival and in shaping Earth’s atmospheric patterns. Our pan-American screening of Peltigera lichens reveals that the lichen thalli produce highly active ice nucleators (INs) resistant to freeze–thaw cycles. Notably, a pure fungal culture from Peltigera britannica released the most potent INs reported to date. Given the global abundance of these lichens, the INs may be important contributors to atmospheric processes.
Archana Dayalu, Marikate Mountain, Bharat Rastogi, John B. Miller, and Luciana Gatti
Biogeosciences, 22, 1509–1528, https://doi.org/10.5194/bg-22-1509-2025, https://doi.org/10.5194/bg-22-1509-2025, 2025
Short summary
Short summary
The Amazon is facing unprecedented disturbance. Determining trends in Amazonia's carbon balance and its sensitivity to disturbance requires reliable vegetation models that adequately capture how its ecosystems exchange carbon with the atmosphere. Using ground- and satellite-based ecosystem products, we present an improved model of land–atmosphere vegetation carbon exchange across the Amazon. Our model agrees with independent aircraft observations from different locations.
José Ángel Callejas-Rodelas, Alexander Knohl, Ivan Mammarella, Timo Vesala, Olli Peltola, and Christian Markwitz
EGUsphere, https://doi.org/10.5194/egusphere-2025-810, https://doi.org/10.5194/egusphere-2025-810, 2025
Short summary
Short summary
The spatial variability of CO2 and water vapour exchanges with the atmosphere was quantified above an agroforestry system, and further compared to a monocropping system, using a total of four eddy covariance stations. The variability of fluxes within the agroforestry was found to be as large as the variability between agroforestry and monocropping, induced by the heterogeneity of the site, which highlights the need for replicated measurements above such ecosystems.
Andrew S. Kowalski
Biogeosciences, 22, 785–789, https://doi.org/10.5194/bg-22-785-2025, https://doi.org/10.5194/bg-22-785-2025, 2025
Short summary
Short summary
The laws of physics show that leaf oxygen is not photosynthetically enriched but extremely dilute due to the overwhelming effects of humidification. This challenges the prevailing diffusion-only paradigm regarding leaf gas exchanges because non-diffusive transport is required. Such transport also explains why fluxes of carbon dioxide and water vapour become decoupled at very high temperatures, as has been observed but not explained by plant physiologists.
Florian Wieland, Nadine Bothen, Ralph Schwidetzky, Teresa M. Seifried, Paul Bieber, Ulrich Pöschl, Konrad Meister, Mischa Bonn, Janine Fröhlich-Nowoisky, and Hinrich Grothe
Biogeosciences, 22, 103–115, https://doi.org/10.5194/bg-22-103-2025, https://doi.org/10.5194/bg-22-103-2025, 2025
Short summary
Short summary
Betula pendula is a widespread birch tree species containing ice nucleation agents that can trigger the freezing of cloud droplets and thereby alter the evolution of clouds. Our study identifies three distinct ice-nucleating macromolecule (INM) aggregates of varying size that can nucleate ice at temperatures up to –5.4°C. Our findings suggest that these vegetation-derived particles may influence atmospheric processes, weather, and climate more strongly than previously thought.
Nicholas Cowan, Toby Roberts, Mark Hanlon, Aurelia Bezanger, Galina Toteva, Alex Tweedie, Karen Yeung, Ajinkya Deshpande, Peter Levy, Ute Skiba, Eiko Nemitz, and Julia Drewer
EGUsphere, https://doi.org/10.5194/egusphere-2024-3654, https://doi.org/10.5194/egusphere-2024-3654, 2024
Short summary
Short summary
We measured soil hydrogen (H2) fluxes from two field sites, a managed grassland and a planted deciduous woodland, with flux measurements of H2 covering full seasonal cycles. We estimate annual H2 uptake of -3.1 ± 0.1 and -12.0 ± 0.4 kg H2 ha-1 yr-1 for the grassland and woodland sites, respectively. Soil moisture was found to be the primary driver of H2 uptake, with the clay content of the soils providing a physical barrier which limited H2 uptake.
Matthew G. Davis, Kevin Yan, and Jennifer G. Murphy
Biogeosciences, 21, 5381–5392, https://doi.org/10.5194/bg-21-5381-2024, https://doi.org/10.5194/bg-21-5381-2024, 2024
Short summary
Short summary
Ammonia applied as fertilizer can volatilize into the atmosphere. This can threaten vulnerable ecosystems and human health. We investigated the partitioning of ammonia between an immobile adsorbed phase and mobile aqueous phase using several adsorption models. Using the Temkin model we determined that previous approaches to this issue may overestimate the quantity available for exchange by a factor of 5–20, suggesting that ammonia emissions from soil may be overestimated.
Annika Einbock and Franz Conen
Biogeosciences, 21, 5219–5231, https://doi.org/10.5194/bg-21-5219-2024, https://doi.org/10.5194/bg-21-5219-2024, 2024
Short summary
Short summary
A small fraction of particles found at great heights in the atmosphere can freeze cloud droplets at temperatures of ≥ −10 °C and thus influence cloud properties. We provide a novel type of evidence that plant canopies are a major source of such biological ice-nucleating particles in the air above the Alps, potentially affecting mixed-phase cloud development.
Stephen E. Schwartz
Biogeosciences, 21, 5045–5057, https://doi.org/10.5194/bg-21-5045-2024, https://doi.org/10.5194/bg-21-5045-2024, 2024
Short summary
Short summary
Anticorrelation in uptake of atmospheric CO2 following pulse emission or abrupt cessation of emissions is examined in two key model intercomparison studies. In both studies net transfer coefficients from the atmosphere to the world ocean and the terrestrial biosphere are anticorrelated across models, reducing inter-model diversity in decrease of atmospheric CO2 following the perturbation, increasing uncertainties of global warming potentials and consequences of prospective emission reductions.
Qian Li, Gil Lerner, Einat Bar, Efraim Lewinsohn, and Eran Tas
Biogeosciences, 21, 4133–4147, https://doi.org/10.5194/bg-21-4133-2024, https://doi.org/10.5194/bg-21-4133-2024, 2024
Short summary
Short summary
Our research indicates that instantaneous changes in meteorological parameters better reflect drought-induced changes in the emission rates of biogenic volatile organic compounds (BVOCs) from natural vegetation than their absolute values. However, following a small amount of irrigation, this trend became more moderate or reversed, accompanied by a dramatic increase in BVOC emission rates. These findings advance our understanding of BVOC emissions under climate change.
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
Biogeosciences, 21, 3593–3616, https://doi.org/10.5194/bg-21-3593-2024, https://doi.org/10.5194/bg-21-3593-2024, 2024
Short summary
Short summary
To improve the accuracy of spatial carbon exchange estimates, we evaluated simple linear models for net ecosystem exchange (NEE) and gross primary productivity (GPP) and how they can be used to upscale the CO2 exchange of agricultural fields. The models are solely driven by Sentinel-2-derived vegetation indices (VIs). Evaluations show that different VIs have variable power to estimate NEE and GPP of crops in different years. The overall performance is as good as results from complex crop models.
Liliana Scapucci, Ankit Shekhar, Sergio Aranda-Barranco, Anastasiia Bolshakova, Lukas Hörtnagl, Mana Gharun, and Nina Buchmann
Biogeosciences, 21, 3571–3592, https://doi.org/10.5194/bg-21-3571-2024, https://doi.org/10.5194/bg-21-3571-2024, 2024
Short summary
Short summary
Forests face increased exposure to “compound soil and atmospheric drought” (CSAD) events due to global warming. We examined the impacts and drivers of CO2 fluxes during CSAD events at multiple layers of a deciduous forest over 18 years. Results showed reduced net ecosystem productivity and forest-floor respiration during CSAD events, mainly driven by soil and atmospheric drought. This unpredictability in forest CO2 fluxes jeopardises reforestation projects aimed at mitigating CO2 emissions.
Piaopiao Ke, Anna Lintunen, Pasi Kolari, Annalea Lohila, Santeri Tuovinen, Janne Lampilahti, Roseline Thakur, Maija Peltola, Otso Peräkylä, Tuomo Nieminen, Ekaterina Ezhova, Mari Pihlatie, Asta Laasonen, Markku Koskinen, Helena Rautakoski, Laura Heimsch, Tom Kokkonen, Aki Vähä, Ivan Mammarella, Steffen Noe, Jaana Bäck, Veli-Matti Kerminen, and Markku Kulmala
EGUsphere, https://doi.org/10.5194/egusphere-2024-1967, https://doi.org/10.5194/egusphere-2024-1967, 2024
Short summary
Short summary
Our research explores diverse ecosystems’ role in climate cooling via the concept of CarbonSink+ Potential. We measured CO2 uptake and loaal aerosol production in forests, farms, peatlands, urban gardens, and coastal areas across Finland and Estonia. The long-term data reveal that while forests are vital regarding CarbonSink+ Potential, farms and urban gardens also play significant roles. These insights can help optimize management policy of natural resource to mitigate global warming.
Tamara Emmerichs, Yen-Sen Lu, and Domenico Taraborrelli
Biogeosciences, 21, 3251–3269, https://doi.org/10.5194/bg-21-3251-2024, https://doi.org/10.5194/bg-21-3251-2024, 2024
Short summary
Short summary
We assess the representation of the plant response to surface water in a global atmospheric chemistry model. This sensitivity is crucial for the return of precipitation back into the atmosphere and thus significantly impacts the representation of weather as well as air quality. The newly implemented response function reduces this process and has a better comparison with satellite observations. This yields a higher intensity of unusual warm periods and higher production of air pollutants.
Nina L. H. Kinney, Charles A. Hepburn, Matthew I. Gibson, Daniel Ballesteros, and Thomas F. Whale
Biogeosciences, 21, 3201–3214, https://doi.org/10.5194/bg-21-3201-2024, https://doi.org/10.5194/bg-21-3201-2024, 2024
Short summary
Short summary
Molecules released from plant pollen induce the formation of ice from supercooled water at temperatures warm enough to suggest an underlying function for this activity. In this study we show that ice nucleators are ubiquitous in pollen. We suggest the molecules responsible fulfil some unrelated biological function and nucleate ice incidentally. The ubiquity of ice-nucleating molecules in pollen and particularly active examples reveal a greater potential for pollen to impact weather and climate.
Max Gaber, Yanghui Kang, Guy Schurgers, and Trevor Keenan
Biogeosciences, 21, 2447–2472, https://doi.org/10.5194/bg-21-2447-2024, https://doi.org/10.5194/bg-21-2447-2024, 2024
Short summary
Short summary
Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays a vital role in the carbon cycle. We can measure GPP locally, but producing larger and continuous estimates is challenging. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
Short summary
Short summary
Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Luana Krebs, Susanne Burri, Iris Feigenwinter, Mana Gharun, Philip Meier, and Nina Buchmann
Biogeosciences, 21, 2005–2028, https://doi.org/10.5194/bg-21-2005-2024, https://doi.org/10.5194/bg-21-2005-2024, 2024
Short summary
Short summary
This study explores year-round forest-floor greenhouse gas (GHG) fluxes in a Swiss spruce forest. Soil temperature and snow depth affected forest-floor respiration, while CH4 uptake was linked to snow cover. Negligible N2O fluxes were observed. In 2022, a warm year, CO2 emissions notably increased. The study suggests rising forest-floor GHG emissions due to climate change, impacting carbon sink behavior. Thus, for future forest management, continuous year-round GHG flux measurements are crucial.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
Short summary
Short summary
The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Ruben B. Schulte, Jordi Vilà-Guerau de Arellano, Susanna Rutledge-Jonker, Shelley van der Graaf, Jun Zhang, and Margreet C. van Zanten
Biogeosciences, 21, 557–574, https://doi.org/10.5194/bg-21-557-2024, https://doi.org/10.5194/bg-21-557-2024, 2024
Short summary
Short summary
We analyzed measurements with the aim of finding relations between the surface atmosphere exchange of NH3 and the CO2 uptake and transpiration by vegetation. We found a high correlation of daytime NH3 emissions with both latent heat flux and photosynthetically active radiation. Very few simultaneous measurements of NH3, CO2 fluxes and meteorological variables exist at sub-diurnal timescales. This study paves the way to finding more robust relations between the NH3 exchange flux and CO2 uptake.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Carolina Voigt, Nick Rutter, Paul Mann, Jean-Daniel Sylvain, and Alexandre Roy
Biogeosciences, 20, 5087–5108, https://doi.org/10.5194/bg-20-5087-2023, https://doi.org/10.5194/bg-20-5087-2023, 2023
Short summary
Short summary
We present an analysis of soil CO2 emissions in boreal and tundra regions during the non-growing season. We show that when the soil is completely frozen, soil temperature is the main control on CO2 emissions. When the soil is around the freezing point, with a mix of liquid water and ice, the liquid water content is the main control on CO2 emissions. This study highlights that the vegetation–snow–soil interactions must be considered to understand soil CO2 emissions during the non-growing season.
Yuhao Cui, Eri Tachibana, Kimitaka Kawamura, and Yuzo Miyazaki
Biogeosciences, 20, 4969–4980, https://doi.org/10.5194/bg-20-4969-2023, https://doi.org/10.5194/bg-20-4969-2023, 2023
Short summary
Short summary
Fatty alcohols (FAs) are major components of surface lipids in plant leaves and serve as surface-active aerosols. Our study on the aerosol size distributions in a forest suggests that secondary FAs (SFAs) originated from plant waxes and that leaf senescence status is likely an important factor controlling the size distribution of SFAs. This study provides new insights into the sources of primary biological aerosol particles (PBAPs) and their effects on the aerosol ice nucleation activity.
Joyson Ahongshangbam, Liisa Kulmala, Jesse Soininen, Yasmin Frühauf, Esko Karvinen, Yann Salmon, Anna Lintunen, Anni Karvonen, and Leena Järvi
Biogeosciences, 20, 4455–4475, https://doi.org/10.5194/bg-20-4455-2023, https://doi.org/10.5194/bg-20-4455-2023, 2023
Short summary
Short summary
Urban vegetation is important for removing urban CO2 emissions and cooling. We studied the response of urban trees' functions (photosynthesis and transpiration) to a heatwave and drought at four urban green areas in the city of Helsinki. We found that tree water use was increased during heatwave and drought periods, but there was no change in the photosynthesis rates. The heat and drought conditions were severe at the local scale but were not excessive enough to restrict urban trees' functions.
Ryan Vella, Andrea Pozzer, Matthew Forrest, Jos Lelieveld, Thomas Hickler, and Holger Tost
Biogeosciences, 20, 4391–4412, https://doi.org/10.5194/bg-20-4391-2023, https://doi.org/10.5194/bg-20-4391-2023, 2023
Short summary
Short summary
We investigated the effect of the El Niño–Southern Oscillation (ENSO) on biogenic volatile organic compound (BVOC) emissions from plants. ENSO events can cause a significant increase in these emissions, which have a long-term impact on the Earth's atmosphere. Persistent ENSO conditions can cause long-term changes in vegetation, resulting in even higher BVOC emissions. We link ENSO-induced emission anomalies with driving atmospheric and vegetational variables.
Nadav Bekin and Nurit Agam
Biogeosciences, 20, 3791–3802, https://doi.org/10.5194/bg-20-3791-2023, https://doi.org/10.5194/bg-20-3791-2023, 2023
Short summary
Short summary
The mechanisms of soil CO2 flux in dry desert soils are not fully understood. Yet studies conducted in desert ecosystems rarely discuss potential errors related to using the commonly used flux chambers in dry and bare soils. In our study, the conventional deployment practice of the chambers underestimated the instantaneous CO2 flux by up to 50 % and the total daily CO2 uptake by 35 %. This suggests that desert soils are a larger carbon sink than previously reported.
Rosemary J. Eufemio, Ingrid de Almeida Ribeiro, Todd L. Sformo, Gary A. Laursen, Valeria Molinero, Janine Fröhlich-Nowoisky, Mischa Bonn, and Konrad Meister
Biogeosciences, 20, 2805–2812, https://doi.org/10.5194/bg-20-2805-2023, https://doi.org/10.5194/bg-20-2805-2023, 2023
Short summary
Short summary
Lichens, the dominant vegetation in the Arctic, contain ice nucleators (INs) that enable freezing close to 0°C. Yet the abundance, diversity, and function of lichen INs is unknown. Our screening of lichens across Alaska reveal that most species have potent INs. We find that lichens contain two IN populations which retain activity under environmentally relevant conditions. The ubiquity and stability of lichen INs suggest that they may have considerable impacts on local atmospheric patterns.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
Short summary
Short summary
Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
Short summary
Short summary
We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Hamadou Balde, Gabriel Hmimina, Yves Goulas, Gwendal Latouche, and Kamel Soudani
Biogeosciences, 20, 1473–1490, https://doi.org/10.5194/bg-20-1473-2023, https://doi.org/10.5194/bg-20-1473-2023, 2023
Short summary
Short summary
This study focuses on the relationship between sun-induced chlorophyll fluorescence (SIF) and ecosystem gross primary productivity (GPP) across the ICOS European flux tower network. It shows that SIF, coupled with reflectance observations, explains over 80 % of the GPP variability across diverse ecosystems but fails to bring new information compared to reflectance alone at coarse spatial scales (~5 km). These findings have applications in agriculture and ecophysiological studies.
John T. Walker, Xi Chen, Zhiyong Wu, Donna Schwede, Ryan Daly, Aleksandra Djurkovic, A. Christopher Oishi, Eric Edgerton, Jesse Bash, Jennifer Knoepp, Melissa Puchalski, John Iiames, and Chelcy F. Miniat
Biogeosciences, 20, 971–995, https://doi.org/10.5194/bg-20-971-2023, https://doi.org/10.5194/bg-20-971-2023, 2023
Short summary
Short summary
Better estimates of atmospheric nitrogen (N) deposition are needed to accurately assess ecosystem risk and impacts from deposition of nutrients and acidity. Using measurements and modeling, we estimate total N deposition of 6.7 kg N ha−1 yr−1 at a forest site in the southern Appalachian Mountains, a region sensitive to atmospheric deposition. Reductions in deposition of reduced forms of N (ammonia and ammonium) will be needed to meet the lowest estimates of N critical loads for the region.
Yi-Ying Chen and Sebastiaan Luyssaert
Biogeosciences, 20, 349–363, https://doi.org/10.5194/bg-20-349-2023, https://doi.org/10.5194/bg-20-349-2023, 2023
Short summary
Short summary
Tropical cyclones are typically assumed to be associated with ecosystem damage. This study challenges this assumption and suggests that instead of reducing leaf area, cyclones in East Asia may increase leaf area by alleviating water stress.
Deborah F. McGlynn, Graham Frazier, Laura E. R. Barry, Manuel T. Lerdau, Sally E. Pusede, and Gabriel Isaacman-VanWertz
Biogeosciences, 20, 45–55, https://doi.org/10.5194/bg-20-45-2023, https://doi.org/10.5194/bg-20-45-2023, 2023
Short summary
Short summary
Using a custom-made gas chromatography flame ionization detector, 2 years of speciated hourly biogenic volatile organic compound data were collected in a forest in central Virginia. We identify diurnal and seasonal variability in the data, which is shown to impact atmospheric oxidant budgets. A comparison with emission models identified discrepancies with implications for model outcomes. We suggest increased monitoring of speciated biogenic volatile organic compounds to improve modeled results.
Luke D. Schiferl, Jennifer D. Watts, Erik J. L. Larson, Kyle A. Arndt, Sébastien C. Biraud, Eugénie S. Euskirchen, Jordan P. Goodrich, John M. Henderson, Aram Kalhori, Kathryn McKain, Marikate E. Mountain, J. William Munger, Walter C. Oechel, Colm Sweeney, Yonghong Yi, Donatella Zona, and Róisín Commane
Biogeosciences, 19, 5953–5972, https://doi.org/10.5194/bg-19-5953-2022, https://doi.org/10.5194/bg-19-5953-2022, 2022
Short summary
Short summary
As the Arctic rapidly warms, vast stores of thawing permafrost could release carbon dioxide (CO2) into the atmosphere. We combined observations of atmospheric CO2 concentrations from aircraft and a tower with observed CO2 fluxes from tundra ecosystems and found that the Alaskan North Slope in not a consistent source nor sink of CO2. Our study shows the importance of using both site-level and atmospheric measurements to constrain regional net CO2 fluxes and improve biogenic processes in models.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, Richard Kranenburg, and Christian Brümmer
Biogeosciences, 19, 5287–5311, https://doi.org/10.5194/bg-19-5287-2022, https://doi.org/10.5194/bg-19-5287-2022, 2022
Short summary
Short summary
For the first time, we compared four methods for estimating the annual dry deposition of total reactive nitrogen into a low-polluted forest ecosystem. In our analysis, we used 2.5 years of flux measurements, an in situ modeling approach, a large-scale chemical transport model (CTM), and canopy budget models. Annual nitrogen dry deposition budgets ranged between 4.3 and 6.7 kg N ha−1 a−1, depending on the applied method.
Michael Staudt, Juliane Daussy, Joseph Ingabire, and Nafissa Dehimeche
Biogeosciences, 19, 4945–4963, https://doi.org/10.5194/bg-19-4945-2022, https://doi.org/10.5194/bg-19-4945-2022, 2022
Short summary
Short summary
We studied the short- and long-term effects of CO2 as a function of temperature on monoterpene emissions from holm oak. Similarly to isoprene, emissions decreased non-linearly with increasing CO2, with no differences among compounds and chemotypes. The CO2 response was modulated by actual leaf and growth temperature but not by growth CO2. Estimates of annual monoterpene release under double CO2 suggest that CO2 inhibition does not offset the increase in emissions due to expected warming.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
Short summary
Short summary
Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Valery A. Isidorov and Andrej A. Zaitsev
Biogeosciences, 19, 4715–4746, https://doi.org/10.5194/bg-19-4715-2022, https://doi.org/10.5194/bg-19-4715-2022, 2022
Short summary
Short summary
Biogenic volatile organic compounds (VOCs) play a critical role in earth-system processes: they are
main playersin the formation of tropospheric O3 and secondary aerosols, which have a significant impact on climate, human health and crops. A complex mixture of VOCs, formed as a result of physicochemical and biological processes, is released into the atmosphere from the forest floor. This review presents data on the composition of VOCs and contribution of various processes to their emissions.
David S. McLagan, Harald Biester, Tomas Navrátil, Stephan M. Kraemer, and Lorenz Schwab
Biogeosciences, 19, 4415–4429, https://doi.org/10.5194/bg-19-4415-2022, https://doi.org/10.5194/bg-19-4415-2022, 2022
Short summary
Short summary
Spruce and larch trees are effective archiving species for historical atmospheric mercury using growth rings of bole wood. Mercury stable isotope analysis proved an effective tool to characterise industrial mercury signals and assess mercury uptake pathways (leaf uptake for both wood and bark) and mercury cycling within the trees. These data detail important information for understanding the mercury biogeochemical cycle particularly in forest systems.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
Short summary
Short summary
Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
Short summary
Short summary
We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
Short summary
Short summary
The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 19, 3739–3756, https://doi.org/10.5194/bg-19-3739-2022, https://doi.org/10.5194/bg-19-3739-2022, 2022
Short summary
Short summary
A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these net ecosystem exchange (NEE) simulations. Random forests and support vector machines performed better than other algorithms. Models with larger timescales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
Short summary
Short summary
The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
Short summary
Short summary
Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
Short summary
Short summary
This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
Short summary
Short summary
To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
Short summary
Short summary
This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
Short summary
Short summary
The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
Short summary
Short summary
Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
Cited articles
Ammann, C., Spirig, C., Leifeld, J., and Neftel, A.: Assessment of the Nitrogen
and Carbon Budget of Two Managed Temperate Grassland Fields, Agr.
Ecosyst. Environ., 133, 150–162, https://doi.org/10.1016/j.agee.2009.05.006,
2009. a
Anthoni, P. M., Knohl, A., Rebmann, C., Freibauer, A., Mund, M., Ziegler, W.,
Kolle, O., and Schulze, E.-D.: Forest and Agricultural Land-Use-Dependent
CO2 Exchange in Thuringia, Germany, Glob. Change Biol., 10,
2005–2019, https://doi.org/10.1111/j.1365-2486.2004.00863.x, 2004. a
Attanasio, A.: Testing for linear Granger causality from natural/anthropogenic
forcings to global temperature anomalies, Theor. Appl.
Climatol., 110, 281–289, https://doi.org/10.1007/s00704-012-0634-x, 2012. a
Attanasio, A., Pasini, A., and Triacca, U.: A contribution to attribution of
recent global warming by out-of-sample Granger causality analysis,
Atmos. Sci. Lett., 13, 67–72, https://doi.org/10.1002/asl.365,
2012. a
Aubinet, M., Chermanne, B., Vandenhaute, M., Longdoz, B., Yernaux, M., and
Laitat, E.: Long Term Carbon Dioxide Exchange above a Mixed Forest in the
Belgian Ardennes, Agr. Forest Meteorol., 108, 293–315,
https://doi.org/10.1016/S0168-1923(01)00244-1, 2001. a
Baldocchi, D.: Measuring fluxes of trace gases and energy between ecosystems
and the atmosphere – the state and future of the eddy covariance method,
Glob. Change Biol., 20, 3600–3609, https://doi.org/10.1111/gcb.12649,
2014. a
Baldocchi, D., Ryu, Y., and Keenan, T.: Terrestrial Carbon Cycle Variability, F1000 Research, 5, 2371,
https://doi.org/10.12688/f1000research.8962.1, 2016. a
Baldocchi, D. D.: Assessing the eddy covariance technique for evaluating carbon
dioxide exchange rates of ecosystems: past, present and future, Glob. Change
Biol., 9, 479–492, https://doi.org/10.1046/j.1365-2486.2003.00629.x,
2003. a
Baldocchi, D. D., Hincks, B. B., and Meyers, T. P.: Measuring
Biosphere-Atmosphere Exchanges of Biologically Related Gases with
Micrometeorological Methods, Ecology, 69, 1331–1340, https://doi.org/10.2307/1941631,
1988. a
Barnett, L., Barrett, A. B., and Seth, A. K.: Granger causality and transfer
entropy Are equivalent for gaussian variables, Phys. Rev. Lett., 103,
238701, https://doi.org/10.1103/PhysRevLett.103.238701, 2009. a
Benjamini, Y. and Hochberg, Y.: Controlling the False Discovery Rate: A
Practical and Powerful Approach to Multiple Testing, J. R.
Stat. Soc. B, 57, 289–300,
https://doi.org/10.1111/j.2517-6161.1995.tb02031.x,
1995. a
Berbigier, P., Bonnefond, J.-M., and Mellmann, P.: CO2 and Water Vapour
Fluxes for 2 Years above Euroflux Forest Site, Agr. Forest
Meteorol., 108, 183–197, https://doi.org/10.1016/S0168-1923(01)00240-4, 2001. a
Beringer, J., Hutley, L. B., Tapper, N. J., and Cernusak, L. A.: Savanna Fires
and Their Impact on Net Ecosystem Productivity in North Australia, Glob. Change Biol., 13, 990–1004,
https://doi.org/10.1111/j.1365-2486.2007.01334.x, 2007. a
Beringer, J., Hutley, L. B., Hacker, J. M., Neininger, B., and U, K. T. P.:
Patterns and Processes of Carbon, Water and Energy Cycles across Northern
Australian Landscapes: From Point to Region, Agr. Forest
Meteorol., 151, 1409–1416, https://doi.org/10.1016/j.agrformet.2011.05.003,
2011a. a
Beringer, J., Hutley, L. B., Hacker, J. M., Neininger, B., and U, K. T. P.:
Patterns and Processes of Carbon, Water and Energy Cycles across Northern
Australian Landscapes: From Point to Region, Agr. Forest
Meteorol., 151, 1409–1416,
https://doi.org/10.1016/j.agrformet.2011.05.003,
2011b. a
Bernhofer, C., Grünwald, T., Moderow, U., Hehn, M., Eichelmann, U., and Prasse,
H.: FLUXNET2015 DE-Obe Oberbärenburg,
https://doi.org/10.18140/FLX/1440151, 2008–2014. a
Bernhofer, C., Grünwald, T., Moderow, U., Hehn, M., Eichelmann, U., and Prasse,
H.: FLUXNET2015 DE-Akm Anklam, https://doi.org/10.18140/FLX/1440213,
2009–2014. a
Bernhofer, C., Grünwald, T., Moderow, U., Hehn, M., Eichelmann, U., Prasse,
H., and Postel, U.: FLUXNET2015 DE-Spw Spreewald, https://doi.org/10.18140/FLX/1440220,
2010–2014. a
Bonal, D., Bosc, A., Ponton, S., Goret, J.-Y., Burban, B., Gross, P.,
Bonnefond, J.-M., Elbers, J., Longdoz, B., Epron, D., Guehl, J.-M., and
Granier, A.: Impact of Severe Dry Season on Net Ecosystem Exchange in the
Neotropical Rainforest of French Guiana, Glob. Change Biol., 14,
1917–1933, https://doi.org/10.1111/j.1365-2486.2008.01610.x, 2008. a
Bond-Lamberty, B., Wang, C., and Gower, S. T.: Net Primary Production and Net
Ecosystem Production of a Boreal Black Spruce Wildfire Chronosequence, Glob. Change Biol., 10, 473–487, https://doi.org/10.1111/j.1529-8817.2003.0742.x, 2004. a
Brooks, J. R., Flanagan, L. B., Varney, G. T., and Ehleringer, J. R.: Vertical
gradients in photosynthetic gas exchange characteristics and refixation of
respired CO2 within boreal forest canopies, Tree Physiol., 17, 1–12,
https://doi.org/10.1093/treephys/17.1.1, 1997. a
Buermann, W., Forkel, M., O'Sullivan, M., Sitch, S., Friedlingstein, P.,
Haverd, V., Jain, A. K., Kato, E., Kautz, M., Lienert, S., Lombardozzi, D.,
Nabel, J. E. M. S., Tian, H., Wiltshire, A. J., Zhu, D., Smith, W., and
Richardson, A. D.: Widespread seasonal compensation effects of spring warming
on northern plant productivity, Nature, 562, 110–114, https://doi.org/10.1038/s41586-018-0555-7,
2018. a
Cassman, K. G., Dobermann, A., Walters, D. T., and Yang, H.: Meeting Cereal
Demand While Protecting Natural Resources and Improving Environmental
Quality, Annu. Rev. Env. Resour., 28, 315–358,
https://doi.org/10.1146/annurev.energy.28.040202.122858, 2003a. a
Cassman, K. G., Dobermann, A., Walters, D. T., and Yang, H.: Meeting Cereal
Demand While Protecting Natural Resources and Improving Environmental
Quality, Annu. Rev. Env. Resour., 28, 315–358,
https://doi.org/10.1146/annurev.energy.28.040202.122858, 2003b. a
Cernusak, L. A., Hutley, L. B., Beringer, J., Holtum, J. A. M., and Turner,
B. L.: Photosynthetic Physiology of Eucalypts along a Sub-Continental
Rainfall Gradient in Northern Australia, Agr. Forest
Meteorol., 151, 1462–1470, https://doi.org/10.1016/j.agrformet.2011.01.006,
2011. a
Chen, J. M., Govind, A., Sonnentag, O., Zhang, Y., Barr, A., and Amiro, B.:
Leaf Area Index Measurements at Fluxnet-Canada Forest Sites,
Agr. Forest Meteorol., 140, 257–268,
https://doi.org/10.1016/j.agrformet.2006.08.005, 2006. a
Chiesi, M., Maselli, F., Bindi, M., Fibbi, L., Cherubini, P., Arlotta, E.,
Tirone, G., Matteucci, G., and Seufert, G.: Modelling Carbon Budget of
Mediterranean Forests Using Ground and Remote Sensing Measurements,
Agr. Forest Meteorol., 135, 22–34,
https://doi.org/10.1016/j.agrformet.2005.09.011, 2005. a
Claessen, J., Molini, A., Martens, B., Detto, M., Demuzere, M., and Miralles, D. G.: Global biosphere–climate interaction: a causal appraisal of observations and models over multiple temporal scales, Biogeosciences, 16, 4851–4874, https://doi.org/10.5194/bg-16-4851-2019, 2019. a
Delpierre, N., Berveiller, D., Granda, E., and Dufrêne, E.: Wood Phenology,
Not Carbon Input, Controls the Interannual Variability of Wood Growth in a
Temperate Oak Forest, New Phytol., 210, 459–470,
https://doi.org/10.1111/nph.13771, 2016. a
Detto, M., Molini, A., Katul, G., Stoy, P., Palmroth, S., and Baldocchi, D.:
Causality and Persistence in Ecological Systems: A Nonparametric Spectral
Granger Causality Approach, Am. Nat., 179, 524–535,
https://doi.org/10.1086/664628, 2012. a, b, c
Dietiker, D., Buchmann, N., and Eugster, W.: Testing the Ability of the
DNDC Model to Predict CO2 and Water Vapour Fluxes of a Swiss
Cropland Site, Agr. Ecosyst. Environ., 139, 396–401,
https://doi.org/10.1016/j.agee.2010.09.002, 2010. a
Dušek, J., Čížková, H., Stellner, S., Czerný, R., and
Květ, J.: Fluctuating Water Table Affects Gross Ecosystem Production and
Gross Radiation Use Efficiency in a Sedge-Grass Marsh, Hydrobiologia, 692,
57–66, https://doi.org/10.1007/s10750-012-0998-z, 2012. a
Ebert-Uphoff, I. and Deng, Y.: Causal Discovery for Climate Research Using
Graphical Models, J. Climate, 25, 5648–5665,
https://doi.org/10.1175/JCLI-D-11-00387.1, 2012. a
El-Madany, T. S., Reichstein, M., Perez-Priego, O., Carrara, A., Moreno, G.,
Martín, M. P., Pacheco-Labrador, J., Wohlfahrt, G., Nieto, H., Weber, U.,
Kolle, O., Luo, Y.-P., Carvalhais, N., and Migliavacca, M.: Drivers of
spatio-temporal variability of carbon dioxide and energy fluxes in a
Mediterranean savanna ecosystem, Agr. Forest Meteorol., 262,
258–278, https://doi.org/10.1016/j.agrformet.2018.07.010,
2018. a, b, c
Elsner, J. B.: Evidence in support of the climate change–Atlantic hurricane
hypothesis, Geophys. Res. Lett., 33, L16705, https://doi.org/10.1029/2006GL026869,
2006. a
Elsner, J. B.: Granger causality and Atlantic hurricanes, Tellus A, 59, 476–485,
https://doi.org/10.1111/j.1600-0870.2007.00244.x, 2007. a
Emmerich, W. E.: Carbon Dioxide Fluxes in a Semiarid Environment with High
Carbonate Soils, Agr. Forest Meteorol., 116, 91–102,
https://doi.org/10.1016/S0168-1923(02)00231-9, 2003. a
Etzold, S., Ruehr, N. K., Zweifel, R., Dobbertin, M., Zingg, A., Pluess, P.,
Häsler, R., Eugster, W., and Buchmann, N.: The Carbon Balance of Two
Contrasting Mountain Forest Ecosystems in Switzerland: Similar Annual
Trends, but Seasonal Differences, Ecosystems, 14, 1289–1309,
https://doi.org/10.1007/s10021-011-9481-3, 2011. a
Fischer, M. L., Billesbach, D. P., Berry, J. A., Riley, W. J., and Torn, M. S.:
Spatiotemporal Variations in Growing Season Exchanges of CO2,
H2O, and Sensible Heat in Agricultural Fields of the Southern
Great Plains, Earth Interact., 11, 1–21, https://doi.org/10.1175/EI231.1, 2007. a
Galvagno, M., Wohlfahrt, G., Cremonese, E., Rossini, M., Colombo, R., Filippa,
G., Julitta, T., Manca, G., Siniscalco, C., di Cella, U. M., and Migliavacca,
M.: Phenology and Carbon Dioxide Source/Sink Strength of a Subalpine
Grassland in Response to an Exceptionally Short Snow Season, Environ.
Res. Lett., 8, 025008, https://doi.org/10.1088/1748-9326/8/2/025008, 2013. a
Gerken, T., Ruddell, B. L., Fuentes, J. D., Araújo, A., Brunsell, N. A., Maia,
J., Manzi, A., Mercer, J., dos Santos, R. N., von Randow, C., and Stoy,
P. C.: Investigating the mechanisms responsible for the lack of surface
energy balance closure in a central Amazonian tropical rainforest,
Agr. Forest Meteorol., 255, 92–103,
https://doi.org/10.1016/j.agrformet.2017.03.023, 2018. a
Gitelson, A. A., Viña, A., Arkebauer, T. J., Rundquist, D. C., Keydan, G.,
and Leavitt, B.: Remote Estimation of Leaf Area Index and Green Leaf Biomass
in Maize Canopies, Geophys. Res. Lett., 30, 1248,
https://doi.org/10.1029/2002GL016450, 2003. a
Goodwell, A. E. and Kumar, P.: Temporal Information Partitioning Networks
(TIPNets): A process network approach to infer ecohydrologic shifts, Water
Resour. Res., 53, 5899–5919, https://doi.org/10.1002/2016WR020218,
2017a. a
Goodwell, A. E. and Kumar, P.: Temporal information partitioning:
Characterizing synergy, uniqueness, and redundancy in interacting
environmental variables, Water Resour. Res., 53, 5920–5942,
https://doi.org/10.1002/2016WR020216,
2017b. a
Goodwell, A. E., Kumar, P., Fellows, A. W., and Flerchinger, G. N.: Dynamic
process connectivity explains ecohydrologic responses to rainfall pulses and
drought, P. Natl. Acad. Sci. USA, 115, E8604–E8613,
https://doi.org/10.1073/pnas.1800236115, 2018. a
Green, J., Konings, A. G., Alemohammad, S. H., Berry, J., Entekhabi, D.,
Kolassa, J., Lee, J.-E., and Gentine, P.: Regionally strong feedbacks between
the atmosphere and terrestrial biosphere, Nat. Geosci., 10, 410–414,
https://doi.org/10.1038/ngeo2957,
2017. a
Grünwald, T. and Bernhofer, C.: A Decade of Carbon, Water and Energy Flux
Measurements of an Old Spruce Forest at the Anchor Station Tharandt,
Tellus B, 59, 387–396,
https://doi.org/10.1111/j.1600-0889.2007.00259.x, 2007. a
Guanter, L., Kaufmann, H., Segl, K., Foerster, S., Rogass, C., Chabrillat, S.,
Kuester, T., Hollstein, A., Rossner, G., Chlebek, C., Straif, C., Fischer,
S., Schrader, S., Storch, T., Heiden, U., Mueller, A., Bachmann, M., Mühle,
H., Müller, R., Habermeyer, M., Ohndorf, A., Hill, J., Buddenbaum, H.,
Hostert, P., Van der Linden, S., Leitão, P. J., Rabe, A., Doerffer, R.,
Krasemann, H., Xi, H., Mauser, W., Hank, T., Locherer, M., Rast, M., Staenz,
K., and Sang, B.: The EnMAP Spaceborne Imaging Spectroscopy Mission for Earth
Observation, Remote Sensing, 7, 8830–8857, https://doi.org/10.3390/rs70708830, 2015. a
Harris, I., Jones, P., Osborn, T., and Lister, D.: Updated high-resolution
grids of monthly climatic observations – the CRU TS3.10 Dataset,
Int. J. Climatol., 34, 623–642, https://doi.org/10.1002/joc.3711,
2014. a
Hatala, J. A., Detto, M., and Baldocchi, D. D.: Gross Ecosystem Photosynthesis
Causes a Diurnal Pattern in Methane Emission from Rice, Geophys. Res.
Lett., 39, L06409, https://doi.org/10.1029/2012GL051303, 2012. a
Hutley, L. B., Beringer, J., Isaac, P. R., Hacker, J. M., and Cernusak, L. A.:
A Sub-Continental Scale Living Laboratory: Spatial Patterns of Savanna
Vegetation over a Rainfall Gradient in Northern Australia, Agr. Forest Meteorol., 151, 1417–1428,
https://doi.org/10.1016/j.agrformet.2011.03.002, 2011. a
Imer, D., Merbold, L., Eugster, W., and Buchmann, N.: Temporal and spatial variations of soil CO2, CH4 and N2O fluxes at three differently managed grasslands, Biogeosciences, 10, 5931–5945, https://doi.org/10.5194/bg-10-5931-2013, 2013. a
Jacobs, C. M. J., Jacobs, A. F. G., Bosveld, F. C., Hendriks, D. M. D., Hensen, A., Kroon, P. S., Moors, E. J., Nol, L., Schrier-Uijl, A., and Veenendaal, E. M.: Variability of annual CO2 exchange from Dutch grasslands, Biogeosciences, 4, 803–816, https://doi.org/10.5194/bg-4-803-2007, 2007. a
Justice, C., Townshend, J., Vermote, E., Masuoka, E., Wolfe, R., Saleous, N.,
Roy, D., and Morisette, J.: An overview of MODIS Land data processing and
product status, Remote Sens. Environ., 83, 3–15,
https://doi.org/10.1016/S0034-4257(02)00084-6, 2002. a
Knohl, A., Schulze, E.-D., Kolle, O., and Buchmann, N.: Large Carbon Uptake by
an Unmanaged 250-Year-Old Deciduous Forest in Central Germany,
Agr. Forest Meteorol., 118, 151–167,
https://doi.org/10.1016/S0168-1923(03)00115-1, 2003a. a
Knohl, A., Schulze, E.-D., Kolle, O., and Buchmann, N.: Large carbon uptake by
an unmanaged 250-year-old deciduous forest in Central Germany, Agr. Forest Meteorol., 118, 151–167,
https://doi.org/10.1016/S0168-1923(03)00115-1,
2003b. a
Kodra, E., Chatterjee, S., and Ganguly, A. R.: Exploring Granger causality
between global average observed time series of carbon dioxide and
temperature, Theor. Appl. Climatol., 104, 325–335,
https://doi.org/10.1007/s00704-010-0342-3, 2011. a
Kretschmer, M., Coumou, D., Donges, J. F., and Runge, J.: Using Causal Effect
Networks to Analyze Different Arctic Drivers of Midlatitude Winter
Circulation, J. Climate, 29, 4069–4081,
https://doi.org/10.1175/JCLI-D-15-0654.1, 2016. a
Kumar, P. and Ruddell, B.: Information driven ecohydrologic self-organization,
Entropy, 12, 2085–2096, https://doi.org/10.3390/e12102085, 2010. a
Kurbatova, J., Li, C., Varlagin, A., Xiao, X., and Vygodskaya, N.: Modeling carbon dynamics in two adjacent spruce forests with different soil conditions in Russia, Biogeosciences, 5, 969–980, https://doi.org/10.5194/bg-5-969-2008, 2008. a
Leuning, R., Cleugh, H. A., Zegelin, S. J., and Hughes, D.: Carbon and Water
Fluxes over a Temperate Eucalyptus Forest and a Tropical Wet/Dry Savanna
in Australia: Measurements and Comparison with MODIS Remote Sensing
Estimates, Agr. Forest Meteorol., 129, 151–173,
https://doi.org/10.1016/j.agrformet.2004.12.004, 2005. a
Lindauer, M., Schmid, H. P., Grote, R., Mauder, M., Steinbrecher, R., and
Wolpert, B.: Net Ecosystem Exchange over a Non-Cleared Wind-Throw-Disturbed
Upland Spruce Forest – Measurements and Simulations, Agr. Forest Meteorol., 197, 219–234, https://doi.org/10.1016/j.agrformet.2014.07.005,
2014. a
Lund, M., Falk, J. M., Friborg, T., Mbufong, H. N., Sigsgaard, C., Soegaard,
H., and Tamstorf, M. P.: Trends in CO2 Exchange in a High Arctic
Tundra Heath, 2000–2010, J. Geophys. Res.-Biogeo., 117, G02001, https://doi.org/10.1029/2011JG001901, 2012. a
Ma, S., Baldocchi, D. D., Hatala, J. A., Detto, M., and Yuste, J. C.: Are
rain-induced ecosystem respiration pulses enhanced by legacies of antecedent
photodegradation in semi-arid environments?, Agr. Forest Meteorol., 154–155, 203–213,
https://doi.org/10.1016/j.agrformet.2011.11.007,
2012. a
Mahecha, M. D., Gans, F., Sippel, S., Donges, J. F., Kaminski, T., Metzger, S., Migliavacca, M., Papale, D., Rammig, A., and Zscheischler, J.: Detecting impacts of extreme events with ecological in situ monitoring networks, Biogeosciences, 14, 4255–4277, https://doi.org/10.5194/bg-14-4255-2017, 2017. a
Malenovský, Z., Rott, H., Cihlar, J., Schaepman, M. E., García-Santos, G.,
Fernandes, R., and Berger, M.: Sentinels for science: Potential of
Sentinel-1, -2, and -3 missions for scientific observations of ocean,
cryosphere, and land, Remote Sens. Environ., 120, 91–101,
https://doi.org/10.1016/j.rse.2011.09.026, 2012. a
Marcolla, B., Pitacco, A., and Cescatti, A.: Canopy Architecture and
Turbulence Structure in a Coniferous Forest, Bound.-Lay.
Meteorol., 108, 39–59, https://doi.org/10.1023/A:1023027709805, 2003. a
Marcolla, B., Cescatti, A., Manca, G., Zorer, R., Cavagna, M., Fiora, A.,
Gianelle, D., Rodeghiero, M., Sottocornola, M., and Zampedri, R.: Climatic
Controls and Ecosystem Responses Drive the Inter-Annual Variability of the
Net Ecosystem Exchange of an Alpine Meadow, Agr. Forest Meteorol., 151, 1233–1243, https://doi.org/10.1016/j.agrformet.2011.04.015, 2011. a
Matsumoto, K., Ohta, T., Nakai, T., Kuwada, T., Daikoku, K., Iida, S., Yabuki,
H., Kononov, A. V., van der Molen, M. K., Kodama, Y., Maximov, T. C.,
Dolman, A. J., and Hattori, S.: Energy Consumption and Evapotranspiration at
Several Boreal and Temperate Forests in the Far East, Agr. Forest Meteorol., 148, 1978–1989, https://doi.org/10.1016/j.agrformet.2008.09.008,
2008. a
McDowell, N. G., Bowling, D. R., Bond, B. J., Irvine, J., Law, B. E., Anthoni,
P., and Ehleringer, J. R.: Response of the Carbon Isotopic Content of
Ecosystem, Leaf, and Soil Respiration to Meteorological and Physiological
Driving Factors in a Pinus Ponderosa Ecosystem, Global Biogeochem.
Cy., 18, GB1013, https://doi.org/10.1029/2003GB002049, 2004. a
McPherson, R. A.: A review of vegetation–atmosphere interactions and their
influences on mesoscale phenomena, Prog. Phys. Geogr., 31,
261–285, https://doi.org/10.1177/0309133307079055, 2007. a
Merbold, L., Eugster, W., Stieger, J., Zahniser, M., Nelson, D., and Buchmann,
N.: Greenhouse Gas Budget (CO2, CH4 and N2O) of Intensively
Managed Grassland Following Restoration, Glob. Change Biol., 20,
1913–1928, https://doi.org/10.1111/gcb.12518, 2014. a
Meyer, W. S., Kondrlova, E., and Koerber, G. R.: Evaporation of Perennial
Semi-Arid Woodland in Southeastern Australia Is Adapted for Irregular but
Common Dry Periods, Hydrol. Process., 29, 3714–3726,
https://doi.org/10.1002/hyp.10467, 2015. a
Miralles, D. G., Gentine, P., Seneviratne, S. I., and Teuling, A. J.:
Land–atmospheric feedbacks during droughts and heatwaves: state of the
science and current challenges, Ann. NY Acad. Sci.,
1436, 19–35, https://doi.org/10.1111/nyas.13912,
2018. a
Mogensen, P. K. and Riseth, A. N.: Optim: A mathematical optimization package
for Julia, Journal of Open Source Software, 3, 615,
https://doi.org/10.21105/joss.00615, 2018. a
Monson, R. and Baldocchi, D.: Terrestrial Biosphere-Atmosphere Fluxes,
Cambridge University Press, Cambridge, https://doi.org/10.1017/CBO9781139629218, 2014. a
Moureaux, C., Debacq, A., Bodson, B., Heinesch, B., and Aubinet, M.: Annual Net
Ecosystem Carbon Exchange by a Sugar Beet Crop, Agr. Forest Meteorol., 139, 25–39,
https://doi.org/10.1016/j.agrformet.2006.05.009, 2006. a
Nave, L. E., Gough, C. M., Maurer, K. D., Bohrer, G., Hardiman, B. S., Moine,
J. L., Munoz, A. B., Nadelhoffer, K. J., Sparks, J. P., Strahm, B. D., Vogel,
C. S., and Curtis, P. S.: Disturbance and the Resilience of Coupled Carbon
and Nitrogen Cycling in a North Temperate Forest, J. Geophys.
Res.-Biogeo., 116, G04016, https://doi.org/10.1029/2011JG001758, 2011. a
Papagiannopoulou, C., Miralles, D. G., Decubber, S., Demuzere, M., Verhoest, N. E. C., Dorigo, W. A., and Waegeman, W.: A non-linear Granger-causality framework to investigate climate–vegetation dynamics, Geosci. Model Dev., 10, 1945–1960, https://doi.org/10.5194/gmd-10-1945-2017, 2017a. a, b, c
Papale, D., Black, T. A., Carvalhais, N., Cescatti, A., Chen, J., Jung, M.,
Kiely, G., Lasslop, G., Mahecha, M. D., Margolis, H., Merbold, L.,
Montagnani, L., Moors, E., Olesen, J. E., Reichstein, M., Tramontana, G., van
Gorsel, E., Wohlfahrt, G., and Ráduly, B.: Effect of spatial sampling from
European flux towers for estimating carbon and water fluxes with artificial
neural networks, J. Geophys. Res.-Biogeo., 120,
1941–1957, https://doi.org/10.1002/2015JG002997,
2015. a
Pearl, J.: Causality, Cambridge, New York, Melbourne, Madrid, Cape Town, Singapore,São Paulo, Delhi, Dubai, Tokyo,
https://doi.org/10.1017/CBO9780511803161, 2009. a, b, c
Pearl, J. and Mackenzie, D.: The Book of Why: The New Science of Cause and
Effect, 1st Edn., Basic Books, Inc., New York, NY, USA, 2018. a
Pilegaard, K., Ibrom, A., Courtney, M. S., Hummelshøj, P., and Jensen,
N. O.: Increasing Net CO2 Uptake by a Danish Beech Forest during the
Period from 1996 to 2009, Agr. Forest Meteorol., 151, 934–946,
https://doi.org/10.1016/j.agrformet.2011.02.013, 2011. a
Pinzon, J. E. and Tucker, C. J.: A Non-Stationary 1981–2012 AVHRR NDVI3g Time
Series, Remote Sensing, 6, 6929–6960, https://doi.org/10.3390/rs6086929,
2014 (data available at: https://ecocast.arc.nasa.gov/data/pub/gimms/3g.v1/, last access: 2 Feruary 2019). a, b
Prescher, A.-K., Grünwald, T., and Bernhofer, C.: Land Use Regulates Carbon
Budgets in Eastern Germany: From NEE to NBP, Agr. Forest Meteorol., 150, 1016–1025, https://doi.org/10.1016/j.agrformet.2010.03.008,
2010a. a
Prescher, A.-K., Grünwald, T., and Bernhofer, C.: Land Use Regulates Carbon
Budgets in Eastern Germany: From NEE to NBP, Agr. Forest Meteorol., 150, 1016–1025, https://doi.org/10.1016/j.agrformet.2010.03.008,
2010b. a
Pryor, S. C., Barthelmie, R. J., and Jensen, B.: Nitrogen Dry Deposition at an
AmeriFlux Site in a Hardwood Forest in the Midwest, Geophys. Res.
Lett., 26, 691–694, https://doi.org/10.1029/1999GL900066, 1999. a
Qi, W. and Dubayah, R. O.: Combining Tandem-X InSAR and simulated GEDI lidar
observations for forest structure mapping, Remote Sens. Environ.,
187, 253–266, https://doi.org/10.1016/j.rse.2016.10.018,
2016. a
Rambal, S., Joffre, R., Ourcival, J. M., Cavender-Bares, J., and Rocheteau, A.:
The Growth Respiration Component in Eddy CO2 Flux from a Quercus Ilex
Mediterranean Forest, Glob. Change Biol., 10, 1460–1469,
https://doi.org/10.1111/j.1365-2486.2004.00819.x, 2004. a
Rayment, M. B. and Jarvis, P. G.: Seasonal Gas Exchange of Black Spruce Using
an Automatic Branch Bag System, Can. J. Forest Res., 29,
1528–1538, https://doi.org/10.1139/x99-130, 1999a. a
Rayment, M. B. and Jarvis, P. G.: Seasonal Gas Exchange of Black Spruce Using
an Automatic Branch Bag System, Can. J. Forest Res., 29,
1528–1538, https://doi.org/10.1139/x99-130, 1999b. a
Rey, A., Pegoraro, E., Tedeschi, V., Parri, I. D., Jarvis, P. G., and
Valentini, R.: Annual Variation in Soil Respiration and Its Components in a
Coppice Oak Forest in Central Italy, Glob. Change Biol., 8, 851–866,
https://doi.org/10.1046/j.1365-2486.2002.00521.x, 2002. a
Rothstein, D. E., Zak, D. R., Pregitzer, K. S., and Curtis, P. S.: Kinetics of
Nitrogen Uptake by Populus Tremuloides in Relation to Atmospheric CO2
and Soil Nitrogen Availability, Tree Physiol., 20, 265–270,
https://doi.org/10.1093/treephys/20.4.265, 2000. a
Ruddell, B., Yu, R., Kang, M., and Childers, D.: Seasonally varied controls of
climate and phenophase on terrestrial carbon dynamics: modeling eco-climate
system state using Dynamical Process Networks, Landscape Ecol., 31, 165–180,
https://doi.org/10.1007/s10980-015-0253-x, 2015. a
Ruddell, B. L. and Kumar, P.: Ecohydrologic process networks: 1.
Identification, Water Resour. Res., 45, w03419,
https://doi.org/10.1029/2008WR007279, 2009. a, b
Ruehr, N. K., Martin, J. G., and Law, B. E.: Effects of Water Availability on
Carbon and Water Exchange in a Young Ponderosa Pine Forest: Above- and
Belowground Responses, Agr. Forest Meteorol., 164, 136–148,
https://doi.org/10.1016/j.agrformet.2012.05.015, 2012a. a
Ruehr, N. K., Martin, J. G., and Law, B. E.: Effects of Water Availability on
Carbon and Water Exchange in a Young Ponderosa Pine Forest: Above- and
Belowground Responses, Agr. Forest Meteorol., 164, 136–148,
https://doi.org/10.1016/j.agrformet.2012.05.015, 2012b. a
Runge, J., Heitzig, J., Petoukhov, V., and Kurths, J.: Escaping the Curse of
Dimensionality in Estimating Multivariate Transfer Entropy, Phys. Rev. Lett.,
108, 258701, https://doi.org/10.1103/PhysRevLett.108.258701,
2012. a, b
Runge, J., Petoukhov, V., and Kurths, J.: Quantifying the Strength and Delay of
Climatic Interactions: The Ambiguities of Cross Correlation and a Novel
Measure Based on Graphical Models, J. Climate, 27, 720–739,
https://doi.org/10.1175/JCLI-D-13-00159.1, 2014. a, b
Runge, J., Bathiany, S., Bollt, E., Camps-Valls, G., Coumou, D., Deyle, E., Glymour, C., Kretschmer, M., Mahecha, M. D., Muñoz-Marí, J., van Nes, E. H., Peters, J., Quax, R., Reichstein, M., Scheffer, M., Schölkopf, B., Spirtes, P., Sugihara, G., Sun, J., Zhang, K., and Zscheischler, J.:
Inferring causation from time series in Earth system sciences, Nat.
Commun., 10, 2553, https://doi.org/10.1038/s41467-019-10105-3, 2019a. a, b, c, d, e, f
Saleska, S. R., Miller, S. D., Matross, D. M., Goulden, M. L., Wofsy, S. C.,
da Rocha, H. R., de Camargo, P. B., Crill, P., Daube, B. C., de
Freitas, H. C., Hutyra, L., Keller, M., Kirchhoff, V., Menton, M., Munger,
J. W., Pyle, E. H., Rice, A. H., and Silva, H.: Carbon in Amazon Forests:
Unexpected Seasonal Fluxes and Disturbance-Induced Losses,
Science, 302, 1554–1557, https://doi.org/10.1126/science.1091165, 2003. a
Schade, G. W., Goldstein, A. H., and Lamanna, M. S.: Are Monoterpene Emissions
Influenced by Humidity?, Geophys. Res. Lett., 26, 2187–2190,
https://doi.org/10.1029/1999GL900444, 1999. a
Schreiber, T.: Measuring Information Transfer, Phys. Rev. Lett., 85, 461–464,
https://doi.org/10.1103/PhysRevLett.85.461, 2000. a, b
Scott, R. L., Huxman, T. E., Cable, W. L., and Emmerich, W. E.: Partitioning of
Evapotranspiration and Its Relation to Carbon Dioxide Exchange in a
Chihuahuan Desert Shrubland, Hydrol. Process., 20, 3227–3243,
https://doi.org/10.1002/hyp.6329, 2006. a
Scott, R. L., Cable, W. L., and Hultine, K. R.: The Ecohydrologic Significance
of Hydraulic Redistribution in a Semiarid Savanna, Water Resour. Res.,
44, W02440, https://doi.org/10.1029/2007WR006149, 2008. a
Shadaydeh, M., Garcia, Y. G., Mahecha, M., Reichstein, M., and Denzler, J.:
Analyzing the Time Variant Causality in Ecological Time Series: A
Time-Frequency Approach, in: International Conference on Ecological
Informatics (ICEI), 151–152, available at: https://icei2018.uni-jena.de/ (last access: 14 December 2019), 2018. a
Sippel, S., Forkel, M., Rammig, A., Thonicke, K., Flach, M., Heimann, M., Otto,
F. E. L., Reichstein, M., and Mahecha, M. D.: Contrasting and interacting
changes in simulated spring and summer carbon cycle extremes in European
ecosystems, Environ. Res. Lett., 12, 075006,
https://doi.org/10.1088/1748-9326/aa7398, 2017. a
Spano, D., Duce, P., Marras, S., Sirca, C., Arca, A., Zara, P., and Ventura, A.: FLUXNET2015 IT-Noe Arca di Noe – Le Prigionette, https://doi.org/10.18140/FLX/1440171, 2004–2014. a
Spirtes, P. and Glymour, C.: An Algorithm for Fast Recovery of Sparse Causal
Graphs, Soc. Sci. Comput. Rev., 9, 62–72,
https://doi.org/10.1177/089443939100900106, 1991. a, b
Suni, T., Rinne, J., Reissell, A., Altimir, N., Keronen, P., Rannik, U.,
Dal Maso, M., Kulmala, M., and Vesala, T.: Long-Term Measurements of Surface
Fluxes above a Scots Pine Forest in Hyytiala, Southern Finland,
1996–2001, Boreal Environ. Res., 8, 287–301, 2003. a
Tang, J., Baldocchi, D. D., Qi, Y., and Xu, L.: Assessing Soil CO2 Efflux
Using Continuous Measurements of CO2 Profiles in Soils with Small
Solid-State Sensors, Agr. Forest Meteorol., 118, 207–220,
https://doi.org/10.1016/S0168-1923(03)00112-6, 2003. a
Thum, T., Aalto, T., Laurila, T., Aurela, M., Kolari, P., and Hari, P.:
Parametrization of Two Photosynthesis Models at the Canopy Scale in a
Northern Boreal Scots Pine Forest, Tellus B, 59, 874–890,
https://doi.org/10.1111/j.1600-0889.2007.00305.x, 2007. a
University of East Anglia Climatic Research Unit, Jones, P. D., and Harris, I. C.: Climatic Research Unit (CRU): Time-series (TS) datasets of variations in climate with variations in other phenomena v3, NCAS British Atmospheric Data Centre, available at: http://catalogue.ceda.ac.uk/uuid/3f8944800cc48e1cbc29a5ee12d8542d (last access: 2 February 2019), 2008. a
Valentini, R., Angelis, P. D., Matteucci, G., Monaco, R., Dore, S., and
Mucnozza, G. E. S.: Seasonal Net Carbon Dioxide Exchange of a Beech Forest
with the Atmosphere, Glob. Change Biol., 2, 199–207,
https://doi.org/10.1111/j.1365-2486.1996.tb00072.x, 1996. a
Vitale, L., Di Tommasi, P., D'Urso, G., and Magliulo, V.: The Response of
Ecosystem Carbon Fluxes to LAI and Environmental Drivers in a Maize Crop
Grown in Two Contrasting Seasons, Int. J. Biometeorol.,
60, 411–420, https://doi.org/10.1007/s00484-015-1038-2, 2016. a
von Buttlar, J., Zscheischler, J., Rammig, A., Sippel, S., Reichstein, M., Knohl, A., Jung, M., Menzer, O., Arain, M. A., Buchmann, N., Cescatti, A., Gianelle, D., Kiely, G., Law, B. E., Magliulo, V., Margolis, H., McCaughey, H., Merbold, L., Migliavacca, M., Montagnani, L., Oechel, W., Pavelka, M., Peichl, M., Rambal, S., Raschi, A., Scott, R. L., Vaccari, F. P., van Gorsel, E., Varlagin, A., Wohlfahrt, G., and Mahecha, M. D.: Impacts of droughts and extreme-temperature events on gross primary production and ecosystem respiration: a systematic assessment across ecosystems and climate zones, Biogeosciences, 15, 1293–1318, https://doi.org/10.5194/bg-15-1293-2018, 2018. a
Wang, C., Bond-Lamberty, B., and Gower, S. T.: Environmental Controls on
Carbon Dioxide Flux from Black Spruce Coarse Woody Debris, Oecologia, 132,
374–381, https://doi.org/10.1007/s00442-002-0987-4, 2002a.
a
Wang, C., Bond-Lamberty, B., and Gower, S. T.: Environmental Controls on
Carbon Dioxide Flux from Black Spruce Coarse Woody Debris, Oecologia, 132,
374–381, https://doi.org/10.1007/s00442-002-0987-4, 2002b. a
Wang, C., Bond-Lamberty, B., and Gower, S. T.: Environmental Controls on
Carbon Dioxide Flux from Black Spruce Coarse Woody Debris, Oecologia, 132,
374–381, https://doi.org/10.1007/s00442-002-0987-4, 2002c. a
Westergaard-Nielsen, A., Lund, M., Hansen, B. U., and Tamstorf, M. P.: Camera
Derived Vegetation Greenness Index as Proxy for Gross Primary Production in a
Low Arctic Wetland Area, ISPRS J. Photogramm., 86, 89–99, https://doi.org/10.1016/j.isprsjprs.2013.09.006, 2013. a
Wofsy, S. C., Goulden, M. L., Munger, J. W., Fan, S.-M., Bakwin, P. S., Daube,
B. C., Bassow, S. L., and Bazzaz, F. A.: Net Exchange of CO2 in a
Mid-Latitude Forest, Science, 260, 1314–1317,
https://doi.org/10.1126/science.260.5112.1314, 1993. a
Wohlfahrt, G., Hammerle, A., Haslwanter, A., Bahn, M., Tappeiner, U., and
Cernusca, A.: Seasonal and inter-annual variability of the net ecosystem CO2
exchange of a temperate mountain grassland: Effects of weather and
management, J. Geophys. Res.-Atmos., 113, D08110,
https://doi.org/10.1029/2007JD009286, 2008. a
Woodcock, C. E., Allen, R., Anderson, M., Belward, A., Bindschadler, R., Cohen,
W., Gao, F., Goward, S. N., Helder, D., Helmer, E., Nemani, R., Oreopoulos,
L., Schott, J., Thenkabail, P. S., Vermote, E. F., Vogelmann, J., Wulder,
M. A., and Wynne, R.: Free Access to Landsat Imagery, Science, 320,
1011–1011, https://doi.org/10.1126/science.320.5879.1011a, 2008. a
Wright, S.: Correlation and causation, J. Agr. Res., 20, 557–580,
1921. a
Xu, L., Baldocchi, D. D., and Tang, J.: How Soil Moisture, Rain Pulses, and
Growth Alter the Response of Ecosystem Respiration to Temperature, Global
Biogeochem. Cy., 18, GB4002, https://doi.org/10.1029/2004GB002281, 2004. a
Yu, R., Ruddell, B. L., Kang, M., Kim, J., and Childers, D.: Anticipating
global terrestrial ecosystem state change using FLUXNET, Glob. Change Biol., 25, 2352–2367, https://doi.org/10.1111/gcb.14602,
2019. a
Zielis, S., Etzold, S., Zweifel, R., Eugster, W., Haeni, M., and Buchmann, N.: NEP of a Swiss subalpine forest is significantly driven not only by current but also by previous year's weather, Biogeosciences, 11, 1627–1635, https://doi.org/10.5194/bg-11-1627-2014, 2014. a
Short summary
Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Causal inference promises new insight into biosphere–atmosphere interactions using time series...
Altmetrics
Final-revised paper
Preprint