Articles | Volume 15, issue 21
https://doi.org/10.5194/bg-15-6519-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-15-6519-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Predominance of methanogens over methanotrophs in rewetted fens characterized by high methane emissions
Xi Wen
Section 5.3 Geomicrobiology, GFZ German Research Centre for Geosciences,
Helmholtz Centre Potsdam, Telegrafenberg, 14473 Potsdam, Germany
College of Electrical Engineering, Northwest Minzu University, Lanzhou, 730070, China
Viktoria Unger
CORRESPONDING AUTHOR
Landscape Ecology and Site Evaluation, Faculty for Agricultural and
Environmental Sciences, Rostock University, 18059 Rostock, Germany
Gerald Jurasinski
Landscape Ecology and Site Evaluation, Faculty for Agricultural and
Environmental Sciences, Rostock University, 18059 Rostock, Germany
Franziska Koebsch
CORRESPONDING AUTHOR
Landscape Ecology and Site Evaluation, Faculty for Agricultural and
Environmental Sciences, Rostock University, 18059 Rostock, Germany
Fabian Horn
Section 5.3 Geomicrobiology, GFZ German Research Centre for Geosciences,
Helmholtz Centre Potsdam, Telegrafenberg, 14473 Potsdam, Germany
Gregor Rehder
Department of Marine Chemistry, Leibniz Institute for Baltic Sea Research, 18119 Warnemünde, Germany
Torsten Sachs
Section 1.4 Remote Sensing, GFZ German Research Centre for Geosciences,
Helmholtz Centre Potsdam, Telegrafenberg, 14473 Potsdam, Germany
Dominik Zak
Department of Bioscience, Aarhus University, 8600 Silkeborg, Denmark
Department of Chemical Analytics and Biogeochemistry,
Leibniz Institute of Freshwater Ecology and Inland Fisheries, 12587 Berlin, Germany
Gunnar Lischeid
Institute of Landscape Hydrology, Leibniz Center for Agricultural
Landscape Research, 15374 Münchberg, Germany
Institute of Earth and Environmental Science, University of Potsdam, 14476 Potsdam, Germany
Klaus-Holger Knorr
Institute of Landscape Ecology, University of Münster, 48149 Münster, Germany
Michael E. Böttcher
Geochemistry and Stable Isotope Biogeochemistry, Leibniz Institute for Baltic Sea
Research, 18119 Warnemünde, Germany
Matthias Winkel
Section 5.3 Geomicrobiology, GFZ German Research Centre for Geosciences,
Helmholtz Centre Potsdam, Telegrafenberg, 14473 Potsdam, Germany
Water and Environmental Research Center, Institute of Northern Engineering,
University of Alaska Fairbanks, 306 Tanana Loop, Fairbanks, AK 99775, USA
Paul L. E. Bodelier
Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW),
Droevendaalsesteeg 10, 6708PB Wageningen, the Netherlands
Susanne Liebner
Section 5.3 Geomicrobiology, GFZ German Research Centre for Geosciences,
Helmholtz Centre Potsdam, Telegrafenberg, 14473 Potsdam, Germany
University of Potsdam, Institute of Biochemistry and Biology, 14469 Potsdam, Germany
Related authors
No articles found.
Vertti Kettunen, Tuula Aalto, Henry C. Bittig, Jukka-Pekka Jalkanen, Lauri Laakso, Anteneh Mengistu, Gregor Rehder, Maria Tenkanen, and Martti Honkanen
EGUsphere, https://doi.org/10.5194/egusphere-2026-5442, https://doi.org/10.5194/egusphere-2026-5442, 2026
This preprint is open for discussion and under review for Ocean Science (OS).
Short summary
Short summary
The Baltic Sea carbon balance was estimated using two independent observation-based methods during a 3-year period. One method indicated that the Baltic Sea was a carbon dioxide sink, while the other indicated a source. Ship emissions increased the net carbon dioxide flux to the atmosphere. Despite differences in the overall balance, the methods showed similar patterns in several regions. The results show that both shipping and the method used strongly affect the estimated carbon balance.
Anna-Maria Virkkala, Isabel Wargowsky, Judith Vogt, McKenzie A. Kuhn, Simran Madaan, Tiffany Windholz, Kyle A. Arndt, Gerard Rocher-Ros, Mathias Göckede, David Olefeldt, Edward A. G. Schuur, David Bastviken, Richard O'Keefe, Brendan M. Rogers, Jennifer D. Watts, Kelcy Kent, Kristoffer Aalstad, Kelly Aho, Joonatan Ala-Könni, Haley Alcock, Inge Althuizen, Christopher D. Arp, Jun Asanuma, Mika Aurela, Sivakiruthika Balathandayuthabani, Katrin Attermeyer, Alan Barr, Maialen Barret, Ochirbat Batkhishig, Christina Biasi, Mats P. Björkman, Andrew Black, Elena Blanc-Betes, Pascal Bodmer, Julia Boike, Abdullah Bolek, Frédéric Bouchard, Ingeborg Bussmann, Lea Cabrol, Eleonora Canfora, Sean Carey, Karel Castro-Morales, Namyi Chae, Andreas Christen, Torben R. Christensen, Casper T. Christiansen, Housen Chu, Graham Clark, Francois Clayer, Patrick Crill, Christopher Cunada, Scott J. Davidson, Joshua F. Dean, Sigrid Dengel, Matteo Detto, Catherine Dieleman, Florent Domine, Egor Dyukarev, Colin Edgar, Bo Elberling, Craig A. Emmerton, Eugenie Euskirchen, Grant Falvo, Thomas Friborg, Michelle Garneau, Mariasilvia Giamberini, Mikhail V. Glagolev, Miquel A. Gonzalez-Meler, Gustaf Granath, Jón Guðmundsson, Konsta Happonen, Yoshinobu Harazono, Lorna Harris, Josh Hashemi, Nicholas Hasson, Janna Heerah, Liam Heffernan, Manuel Helbig, Warren Helgason, Michal Heliasz, Greg Henry, Geert Hensgens, Tetsuya Hiyama, Beth Holmes, Macall Hock, David Holl, Jutta Holst, Thomas Holst, Gabriel Hould-Gosselin, Elyn Humphreys, Jacqueline Hung, Jussi Huotari, Hiroki Ikawa, Danil V. Ilyasov, Mamoru Ishikawa, Go Iwahana, Hiroki Iwata, Marcin Antoni Jackowicz-Korczynski, Joachim Jansen, Järvi Järveoja, Vincent E. J. Jassey, Rasmus Jensen, Katharina Jentzsch, Robert G. Jespersen, Carl-Fredrik Johannesson, Cheristy P. Jones, Anders Jonsson, Ji Young Jung, Sari Juutinen, Evan Kane, Jan Karlsson, Sergey Karsanaev, Kuno Kasak, Julia Kelly, Kasha Kempton, Marcus Klaus, George W. Kling, Natascha Kljun, Jacqueline Knutson, Hideki Kobayashi, John Kochendorfer, Kukka-Maaria Kohonen, Pasi Kolari, Mika Korkiakoski, Aino Korrensalo, Pirkko Kortelainen, Egle Koster, Kajar Koster, Ayumi Kotani, Praveena Krishnan, Juliya Kurbatova, Lars Kutzbach, Min Jung Kwon, Ethan D. Kyzivat, Jessica Lagroix, Theodore Langhorst, Elena Lapshina, Tuula Larmola, Klaus S. Larsen, Isabelle Laurion, Justin Ledman, Hanna Lee, A. Joshua Leffler, Lance Lesack, Anders Lindroth, David Lipson, Annalea Lohila, Efrén López-Blanco, Vincent L. St. Louis, Erik Lundin, Miska Luoto, Takashi Machimura, Marta Magnani, Avni Malhotra, Marja Maljanen, Ivan Mammarella, Elisa Männistö, Luca Belelli Marchesini, Phil Marsh, Pertti J. Martikainen, Maija E. Marushchak, Mikhail Mastepanov, Alex Mavrovic, Trofim Maximov, Christina Minions, Daniel F. Nadeau, Marco Montemayor, Tomoaki Morishita, Patrick Murphy, Erin Nicholls, Mats B. Nilsson, Anastasia Niyazova, Jenni Nordén, Koffi Dodji Noumonvi, Hannu Nykänen, Walter Oechel, Anne Ojala, Tomohiro Okadera, Sujan Pal, Alexey V. Panov, Tim Papakyriakou, Dario Papale, Sang-Jong Park, Frans-Jan W. Parmentier, Gilberto Pastorello, Mike Peacock, Matthias Peichl, Roman Petrov, Kyra St. Pierre, Norbert Pirk, Jessica Plein, Vilmantas Preskienis, Anatoly Prokushkin, Jukka Pumpanen, Hilary A. Rains, Niklas Rakos, Aleksi Räsänen, Helena Rautakoski, Riikka Rinnan, Janne Rinne, Adrian Rocha, Nigel Roulet, Alexandre Roy, Anna Rutgersson, Aleksandr F. Sabrekov, Torsten Sachs, Erik Sahlée, Alejandro Salazar, Henrique Oliveira Sawakuchi, Christopher Schulze, Roger Seco, Armando Sepulveda-Jauregui, Svetlana Serikova, Abbey Serrone, Hanna M. Silvennoinen, Sofie Sjogersten, June Skeeter, Jo Snöälv, Sebastian Sobek, Oliver Sonnentag, Emily H. Stanley, Maria Strack, Lena Strom, Patrick Sullivan, Ryan Sullivan, Anna Sytiuk, Torbern Tagesson, Pierre Taillardat, Julie Talbot, Suzanne E. Tank, Mario Tenuta, Irina Terenteva, Frederic Thalasso, Antoine Thiboult, Halldor Thorgeirsson, Fenix Garcia Tigreros, Margaret Torn, Amy Townsend-Small, Claire Treat, Alain Tremblay, Carlo Trotta, Eeva-Stiina Tuittila, Merritt Turetsky, Masahito Ueyama, Muhammad Umair, Aki Vähä, Lona van Delden, Maarten van Hardenbroek, Andrej Varlagin, Ruth K. Varner, Tarmo Virtanen, Elena Veretennikova, Timo Vesala, Carolina Voigt, Jorien E. Vonk, Robert Wagner, Katey Walter Anthony, Qinxue Wang, Masataka Watanabe, Hailey Webb, Jeffrey M. Welker, Andreas Westergaard-Nielsen, Sebastian Westermann, Jeffrey R. White, Christian Wille, Scott N. Williamson, Scott Zolkos, Donatella Zona, and Susan M. Natali
Earth Syst. Sci. Data, 18, 6357–6409, https://doi.org/10.5194/essd-18-6357-2026, https://doi.org/10.5194/essd-18-6357-2026, 2026
Short summary
Short summary
This dataset includes monthly measurements of carbon dioxide and methane exchange between land, water, and the atmosphere from over 1000 sites in Arctic and boreal regions. It combines measurements from a variety of ecosystems, including wetlands, forests, tundra, lakes, and rivers, gathered by over 260 researchers from 1984–2024. This dataset can be used to improve and reduce uncertainty in carbon budgets in order to strengthen our understanding of climate feedbacks in a warming world.
Matty Kah, Cheikh Faye, Mamadou Lamine Mbaye, Bouly Sané, Nicaise Yalo, and Gunnar Lischeid
Proc. IAHS, 389, 25–32, https://doi.org/10.5194/piahs-389-25-2026, https://doi.org/10.5194/piahs-389-25-2026, 2026
Short summary
Short summary
Communities along the Gambia River have low awareness of water rules and limited participation in management, leading to conflicts between farmers and herders. Supporting local organizations improves cooperation and fair water sharing. Strengthening community involvement and communication is key to sustainable water management and reducing disputes.
Henning Teickner, Julien Arsenault, Mariusz Gałka, and Klaus-Holger Knorr
Biogeosciences, 23, 5549–5570, https://doi.org/10.5194/bg-23-5549-2026, https://doi.org/10.5194/bg-23-5549-2026, 2026
Short summary
Short summary
We present a method to estimate the degree of decomposition (fraction of initial mass remaining) of peat from mid-infrared spectra, which also allows to reconstruct the initial mass (aboveground net primary production). Both quantities are required to estimate the mass and carbon balance of peatlands and are useful to model peat physical and hydraulic properties. The approach is therefore useful to test and improve peatland models and our understanding of the long-term peatland carbon cycle.
Nithin D. Pillai, Christian Wille, Felix Nieberding, Manuel Helbig, and Torsten Sachs
Earth Syst. Sci. Data, 18, 5627–5641, https://doi.org/10.5194/essd-18-5627-2026, https://doi.org/10.5194/essd-18-5627-2026, 2026
Short summary
Short summary
We present a continuous dataset of carbon and energy fluxes measured over an alpine steppe in the Tibetan Plateau using the Eddy Covariance technique at 19 m. Covering a larger footprint (~ 30 ha) than the existing long-term 3 m measurements, it enables landscape-scale flux estimation, improved alignment with satellite observations, and supports studies of ecosystem modelling and satellite product validation.
Nicolas Behrens, Klaus-Holger Knorr, Christoph Rückriem, and Mana Gharun
Biogeosciences, 23, 5071–5094, https://doi.org/10.5194/bg-23-5071-2026, https://doi.org/10.5194/bg-23-5071-2026, 2026
Short summary
Short summary
We analysed carbon fluxes and their response to climate in a drained bog. Annual budgets varied from net emissions to near-neutral. Warm spring temperatures increased CO2 uptake, a warm autumn increased emissions. Atmospheric drought early in the year reduced CO2 uptake more than later. Our results show that carbon fluxes from drained bogs are variable and the timing of climate anomalies controls their impact on carbon fluxes. This will be increasingly important with ongoing climate warming.
Lina Oskamp, Marta Pérez Rodríguez, Adelina Calean, Olaf Rienitz, Klaus-Holger Knorr, Kazumasa Oguri, Masashi Tsuchiya, Marco Benkhettab Sindlev, Stephan Krisch, Arianna Olivelli, Frank Wenzhöfer, Ronnie N. Glud, and Harald Biester
EGUsphere, https://doi.org/10.5194/egusphere-2026-3608, https://doi.org/10.5194/egusphere-2026-3608, 2026
Short summary
Short summary
Lead (Pb) isotopes in marine sediments are used as source tracers of Pb in the oceans. Recent studies suggested Pb isotope exchange on sinking particles, but it remained unknown if this affects isotope signatures. Our study on deep-sea sediments of the South Atlantic Ocean reveals that Pb isotope separation occurs in sinking particles and depends on the intensity of primary productivity.
Fabian Seemann, Michael Zech, Maren Jenrich, Guido Grosse, Benjamin M. Jones, Claire Treat, Lutz Schirrmeister, Susanne Liebner, and Jens Strauss
Biogeosciences, 23, 3675–3695, https://doi.org/10.5194/bg-23-3675-2026, https://doi.org/10.5194/bg-23-3675-2026, 2026
Short summary
Short summary
Arctic coastal landscapes, like those in northernmost Alaska, are often characterized by saline permafrost which is prone to thawing. We studied six sediment cores to understand how thawing and salinity affect organic matter breakdown and landscape change. Our results show that salinity accelerates organic matter degradation when permafrost thaws. This highlights the overlooked risk of salinity in shaping Arctic landscapes and carbon mineralization as the climate continues to warm.
Judith Vogt, Tarek S. El-Madany, Christian Burgold, Abdullah Bolek, Elliot Pratt, Torsten Sachs, Christian Wille, Manuel Helbig, Maximilian P. Lau, Sebastian Zug, Jörg Matschullat, and Mathias Göckede
EGUsphere, https://doi.org/10.5194/egusphere-2026-2262, https://doi.org/10.5194/egusphere-2026-2262, 2026
Short summary
Short summary
We developed BlueMinerva, an integrated autonomous platform designed to monitor carbon exchange between water and air, water temperature, chemistry, depth, and weather conditions with high spatial coverage. The platform was tested at two lakes and yielded reliable high-quality data on carbon dynamics, demonstrating its potential for widespread use and adaptation by scientists and stakeholders.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Dorothee C. E. Bakker, Judith Hauck, Peter Landschützer, Corinne Le Quéré, Hongmei Li, Ingrid T. Luijkx, Glen P. Peters, Wouter Peters, Julia Pongratz, Clemens Schwingshackl, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Kjetil Aas, Simone R. Alin, Peter Anthoni, Leticia Barbero, Nicholas R. Bates, Nicolas Bellouin, Alice Benoit-Cattin, Carla F. Berghoff, Raffaele Bernardello, Laurent Bopp, Ida Bagus Mandhara Brasika, Matthew A. Chamberlain, Naveen Chandra, Frédéric Chevallier, Louise P. Chini, Nathan O. Collier, Thomas H. Colligan, Margot Cronin, Laique M. Djeutchouang, Xinyu Dou, Matt P. Enright, Kazutaka Enyo, Michael Erb, Wiley Evans, Richard A. Feely, Liang Feng, Daniel J. Ford, Adrianna Foster, Filippa Fransner, Thomas Gasser, Marion Gehlen, Thanos Gkritzalis, Jefferson Goncalves De Souza, Giacomo Grassi, Luke Gregor, Nicolas Gruber, Bertrand Guenet, Özgür Gürses, Kirsty Harrington, Ian Harris, Jens Heinke, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Akihiko Ito, Andrew R. Jacobson, Atul K. Jain, Tereza Jarníková, Annika Jersild, Fei Jiang, Steve D. Jones, Etsushi Kato, Ralph F. Keeling, Kees Klein Goldewijk, Jürgen Knauer, Yawen Kong, Jan Ivar Korsbakken, Charles Koven, Taro Kunimitsu, Xin Lan, Junjie Liu, Zhiqiang Liu, Zhu Liu, Claire Lo Monaco, Lei Ma, Gregg Marland, Patrick C. McGuire, Galen A. McKinley, Joe R. Melton, Natalie Monacci, Erwan Monier, Eric J. Morgan, David R. Munro, Jens D. Müller, Shin-Ichiro Nakaoka, Lorna R. Nayagam, Yosuke Niwa, Tobias Nutzel, Are Olsen, Abdirahman M. Omar, Naiqing Pan, Sudhanshu Pandey, Denis Pierrot, Zhangcai Qin, Pierre Regnier, Gregor Rehder, Laure Resplandy, Alizée Roobaert, Thais M. Rosan, Christian Rödenbeck, Jörg Schwinger, Ingunn Skjelvan, T. Luke Smallman, Victoria Spada, Mohanan G. Sreeush, Qing Sun, Adrienne J. Sutton, Colm Sweeney, Didier Swingedouw, Roland Séférian, Shintaro Takao, Hiroaki Tatebe, Hanqin Tian, Xiangjun Tian, Bronte Tilbrook, Hiroyuki Tsujino, Francesco Tubiello, Erik van Ooijen, Guido R. van der Werf, Sebastiaan J. van de Velde, Anthony P. Walker, Rik Wanninkhof, Xiaojuan Yang, Wenping Yuan, Xu Yue, and Jiye Zeng
Earth Syst. Sci. Data, 18, 3211–3288, https://doi.org/10.5194/essd-18-3211-2026, https://doi.org/10.5194/essd-18-3211-2026, 2026
Short summary
Short summary
The Global Carbon Budget 2025 describes the methodology, main results, and datasets used to quantify the anthropogenic emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, land ecosystems, and the ocean over the historical period (1750–2025). These living datasets are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Florian Börgel, Itzel Ruvalcaba Baroni, Leonie Barghorn, Leonard Borchert, Bronwyn Cahill, Cyril Dutheil, Leonie Esters, Małgorzata Falarz, Helena L. Filipsson, Matthias Gröger, Jari Hänninen, Magnus Hieronymus, Erko Jakobson, Mehdi Pasha Karami, Karol Kuliński, Taavi Liblik, H. E. Markus Meier, Gabriele Messori, Lev Naumov, Thomas Neumann, Piia Post, Gregor Rehder, Anna Rutgersson, and Georg Sebastian Voelker
Earth Syst. Dynam., 17, 415–450, https://doi.org/10.5194/esd-17-415-2026, https://doi.org/10.5194/esd-17-415-2026, 2026
Short summary
Short summary
This review explains how weather patterns, guided by the polar jet stream, influence the Baltic Sea’s climate and ecosystem. It covers the North Atlantic Oscillation, blocking events and other processes and discusses how they affect temperature, rainfall, and storms from days to decades. These shifts then impact oxygen levels, productivity, and acidification in the Baltic Sea. Physical links are fairly well known, but biogeochemical pathways remain uncertain.
Henning Teickner and Klaus-Holger Knorr
SOIL, 12, 497–519, https://doi.org/10.5194/soil-12-497-2026, https://doi.org/10.5194/soil-12-497-2026, 2026
Short summary
Short summary
We developed models that predict physical and chemical peat properties from mid-infrared spectra (MIRS). These peat properties are necessary for modeling peatland dynamics. Compared to direct measurements of these properties, measurements of MIRS require less sample material and save time. Unlike existing models that focus on peat, the models developed here are openly available, relatively easy to use and have basic quality checks and estimates for prediction errors.
Yuanxu Dong, Christa A. Marandino, Ryo Dobashi, David T. Ho, Gregor Rehder, Henry C. Bittig, Josefine Karnatz, Bita Sabbaghzadeh, Helen Czerski, and Anja Engel
Atmos. Chem. Phys., 26, 5567–5587, https://doi.org/10.5194/acp-26-5567-2026, https://doi.org/10.5194/acp-26-5567-2026, 2026
Short summary
Short summary
Air-sea gas exchange regulates the Earth’s climate. However, the description of the kinetic exchange process only uses wind speed, neglecting other drivers. In this study, we investigate how fetch and natural surfactants modulate air-sea carbon dioxide exchange. Measurements from the central Baltic Sea show that limited fetch and elevated surfactants significantly suppress this exchange. A new parameterisation is provided, improving regional carbon budgets and evaluations of climate solutions.
Kenneth Gutiérrez‑García, Gunnar Lischeid, and Michael Rode
EGUsphere, https://doi.org/10.5194/egusphere-2026-1203, https://doi.org/10.5194/egusphere-2026-1203, 2026
Short summary
Short summary
We analyzed seven years of high-frequency water quality data from the Bode River, Germany, using Principal Component Analysis on multivariate time series (EOF analysis). We successfully separated broad impacts like storms and pollution from local biological processes like algae growth. Our results prove that advanced statistical tools are essential to untangle complex environmental data, providing the vital insights needed to monitor and protect natural river systems.
Pratirupa Bardhan, Claudia Frey, Gregor Rehder, and Hermann W. Bange
Biogeosciences, 23, 1987–2002, https://doi.org/10.5194/bg-23-1987-2026, https://doi.org/10.5194/bg-23-1987-2026, 2026
Short summary
Short summary
Nitrous oxide (N2O), a potent greenhouse gas, is released from coastal seas & estuaries, yet we don't fully understand how it is formed and consumed. In this study we collected water from several sites in the central Baltic Sea. N2O came from ammonia in oxic waters. Deep waters with low to no oxygen noted more active N2O cycling. The seafloor was a source in some areas. Typically N2O is produced by bacteria, but our results indicate possibility of other players like fungi or chemical reactions.
Hannes Keck, Laurence Strubbe, Paul M. Magyar, Adriano Joss, Andreas Froemelt, André Kupferschmid, Klaus-Holger Knorr, and Joachim Mohn
EGUsphere, https://doi.org/10.5194/egusphere-2026-857, https://doi.org/10.5194/egusphere-2026-857, 2026
Short summary
Short summary
We monitored nitrous oxide in a pilot wastewater treatment plant in real time to understand how microbes produce and remove this greenhouse gas. We designed and tested a laser-based analytical setup, with which we were able to show that denitrification is the main source of nitrous oxide emissions and that low oxygen concentrations enhances nitrous oxide removal. Our approach offers a new way to monitor the wastewater treatment processes and to cut climate-relevant nitrous oxide emissions.
Michael W. Thayne, Karl Kemper, Christian Wille, Aram Kalhori, and Torsten Sachs
Biogeosciences, 23, 477–495, https://doi.org/10.5194/bg-23-477-2026, https://doi.org/10.5194/bg-23-477-2026, 2026
Short summary
Short summary
This study examines methane (CH4) emissions across an Arctic catchment on Disko Island, Greenland. Using over 700 floating-chamber measurements collected during two summer seasons, we show that methane fluxes vary strongly between lakes, streams, and shorelines and change over time. Early-season emissions are mainly driven by weather and hydrology, while later patterns reflect water chemistry and biological processes.
Amanda Sellmaier, Ellen Damm, Torsten Sachs, Benjamin Kirbus, Inge Wiekenkamp, Annette Rinke, Falk Pätzold, Daiki Nomura, Astrid Lampert, and Markus Rex
Atmos. Chem. Phys., 25, 17685–17700, https://doi.org/10.5194/acp-25-17685-2025, https://doi.org/10.5194/acp-25-17685-2025, 2025
Short summary
Short summary
This study presents continuous ship-borne measurements of methane (CH4) concentration and isotopic composition monitored during an ice drift expedition in 2020. Using trajectory analysis, we linked atmospheric CH4 variabilities to air mass pathways transported over open water or sea-ice. The study highlights the potential of ship-borne observations to fill significant data gaps in the high Arctic.
Gunnar Lischeid, Justus Weyers, and Helen Scholz
EGUsphere, https://doi.org/10.5194/egusphere-2025-3827, https://doi.org/10.5194/egusphere-2025-3827, 2025
Preprint archived
Short summary
Short summary
This study aimed at a better understanding why time series of stream discharge and groundwater head differ that much in spite of spatial proximity and similar boundary conditions. Time series a 36,000 km2 region in Germany was analysed. Climate patterns explained 22 % of the spatial variance. There was no significant difference between major land use patterns. Damping of the input signal in the subsoil explained another 32 % of the spatial variance. It was closely related to long-term trends.
Daniel L. Pönisch, Henry C. Bittig, Martin Kolbe, Ingo Schuffenhauer, Stefan Otto, Peter Holtermann, Kusala Premaratne, and Gregor Rehder
Biogeosciences, 22, 3583–3614, https://doi.org/10.5194/bg-22-3583-2025, https://doi.org/10.5194/bg-22-3583-2025, 2025
Short summary
Short summary
Rewetted peatlands exhibit natural spatiotemporal biogeochemical heterogeneity, influenced by water level and vegetation. This study investigated the variability of greenhouse gas distribution in a peatland rewetted with brackish water. Two innovative sensor-equipped platforms were used to measure a wide range of marine physicochemical variables at high temporal resolution. The measurements revealed strong fluctuations in CO2 and CH4, expressed as multi-day, diurnal, and event-based variability.
Henning Teickner, Edzer Pebesma, and Klaus-Holger Knorr
Earth Syst. Dynam., 16, 891–914, https://doi.org/10.5194/esd-16-891-2025, https://doi.org/10.5194/esd-16-891-2025, 2025
Short summary
Short summary
The Holocene Peatland Model (HPM) is a widely used peatland model to understand and predict long-term peatland dynamics. Here, we test whether the HPM can predict Sphagnum litterbag decomposition rates from oxic to anoxic conditions. Our results indicate that decomposition rates change more gradually from oxic to anoxic conditions and may be underestimated under anoxic conditions, possibly because the effect of water table fluctuations on decomposition rates is not considered.
Qing Ying, Benjamin Poulter, Jennifer D. Watts, Kyle A. Arndt, Anna-Maria Virkkala, Lori Bruhwiler, Youmi Oh, Brendan M. Rogers, Susan M. Natali, Hilary Sullivan, Amanda Armstrong, Eric J. Ward, Luke D. Schiferl, Clayton D. Elder, Olli Peltola, Annett Bartsch, Ankur R. Desai, Eugénie Euskirchen, Mathias Göckede, Bernhard Lehner, Mats B. Nilsson, Matthias Peichl, Oliver Sonnentag, Eeva-Stiina Tuittila, Torsten Sachs, Aram Kalhori, Masahito Ueyama, and Zhen Zhang
Earth Syst. Sci. Data, 17, 2507–2534, https://doi.org/10.5194/essd-17-2507-2025, https://doi.org/10.5194/essd-17-2507-2025, 2025
Short summary
Short summary
We present daily methane (CH4) fluxes of northern wetlands at 10 km resolution during 2016–2022 (WetCH4) derived from a novel machine learning framework. We estimated an average annual CH4 emission of 22.8 ± 2.4 Tg CH4 yr−1 (15.7–51.6 Tg CH4 yr−1). Emissions were intensified in 2016, 2020, and 2022, with the largest interannual variation coming from Western Siberia. Continued, all-season tower observations and improved soil moisture products are needed for future improvement of CH4 upscaling.
Maren Jenrich, Juliane Wolter, Susanne Liebner, Christian Knoblauch, Guido Grosse, Fiona Giebeler, Dustin Whalen, and Jens Strauss
Biogeosciences, 22, 2069–2086, https://doi.org/10.5194/bg-22-2069-2025, https://doi.org/10.5194/bg-22-2069-2025, 2025
Short summary
Short summary
Climate warming in the Arctic is causing the erosion of permafrost coasts and the transformation of permafrost lakes into lagoons. To understand how this affects greenhouse gas (GHG) emissions, we studied carbon dioxide (CO₂) and methane (CH₄) production in lagoons with varying sea connections. Younger lagoons produce more CH₄, while CO₂ increases under more marine conditions. Flooding of permafrost lowlands due to rising sea levels may lead to higher GHG emissions from Arctic coasts in future.
Nithin D. Pillai, Christian Wille, Felix Nieberding, Manuel Helbig, and Torsten Sachs
EGUsphere, https://doi.org/10.5194/egusphere-2025-530, https://doi.org/10.5194/egusphere-2025-530, 2025
Preprint archived
Short summary
Short summary
The Tibetan Plateau is warming rapidly, affecting carbon cycles in its ecosystems. Using two measurement heights (3 m and 19 m) in an alpine steppe near Nam Co, we explored how spatial scale impacts CO2 fluxes. CO2 fluxes varied with spatial scale due to landscape heterogeneity. This variability shows that the measurement scale can shift the ecosystem's carbon balance from CO2 sink to either carbon neutral or CO2 source, highlighting the importance of considering spatial scale in carbon studies.
Inge Wiekenkamp, Anna Katharina Lehmann, Alexander Bütow, Jörg Hartmann, Stefan Metzger, Thomas Ruhtz, Christian Wille, Mathias Zöllner, and Torsten Sachs
Atmos. Meas. Tech., 18, 749–772, https://doi.org/10.5194/amt-18-749-2025, https://doi.org/10.5194/amt-18-749-2025, 2025
Short summary
Short summary
Airborne eddy covariance platforms are crucial to measure three-dimensional wind and turbulent matter and energy transport between the surface and the atmosphere at larger scales. In this study, we introduce a new airborne eddy covariance platform (Schleicher ASK-16) and demonstrate that this platform is able to accurately measure turbulent fluxes and wind vectors. Data from this platform can help to build bridges between local tower measurements and remote-sensing-based products.
Henning Teickner, Edzer Pebesma, and Klaus-Holger Knorr
Biogeosciences, 22, 417–433, https://doi.org/10.5194/bg-22-417-2025, https://doi.org/10.5194/bg-22-417-2025, 2025
Short summary
Short summary
Decomposition rates for Sphagnum mosses, the main peat-forming plants in northern peatlands, are often derived from litterbag experiments. Here, we estimate initial leaching losses from available Sphagnum litterbag experiments and analyze how decomposition rates are biased when initial leaching losses are ignored. Our analyses indicate that initial leaching losses range between 3 to 18 mass-% and that this may result in overestimated mass losses when extrapolated to several decades.
Tabea Rettelbach, Ingmar Nitze, Inge Grünberg, Jennika Hammar, Simon Schäffler, Daniel Hein, Matthias Gessner, Tilman Bucher, Jörg Brauchle, Jörg Hartmann, Torsten Sachs, Julia Boike, and Guido Grosse
Earth Syst. Sci. Data, 16, 5767–5798, https://doi.org/10.5194/essd-16-5767-2024, https://doi.org/10.5194/essd-16-5767-2024, 2024
Short summary
Short summary
Permafrost landscapes in the Arctic are rapidly changing due to climate warming. Here, we publish aerial images and elevation models with very high spatial detail that help study these landscapes in northwestern Canada and Alaska. The images were collected using the Modular Aerial Camera System (MACS). This dataset has significant implications for understanding permafrost landscape dynamics in response to climate change. It is publicly available for further research.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Jiří Dušek, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo A. Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Mana Gharun, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
Biogeosciences, 21, 5079–5115, https://doi.org/10.5194/bg-21-5079-2024, https://doi.org/10.5194/bg-21-5079-2024, 2024
Short summary
Short summary
The movement of water, carbon, and energy from the Earth's surface to the atmosphere, or flux, is an important process to understand because it impacts our lives. Here, we outline a method called FLUXCOM-X to estimate global water and CO2 fluxes based on direct measurements from sites around the world. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Silvie Lainela, Erik Jacobs, Stella-Theresa Luik, Gregor Rehder, and Urmas Lips
Biogeosciences, 21, 4495–4519, https://doi.org/10.5194/bg-21-4495-2024, https://doi.org/10.5194/bg-21-4495-2024, 2024
Short summary
Short summary
We evaluate the variability of carbon dioxide and methane in the surface layer of the north-eastern basins of the Baltic Sea in 2018. We show that the shallower coastal areas have considerably higher spatial variability and seasonal amplitude of surface layer pCO2 and cCH4 than measured in the offshore areas of the Baltic Sea. Despite this high variability, caused mostly by coastal physical processes, the average annual air–sea CO2 fluxes differed only marginally between the sub-basins.
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
Biogeosciences, 21, 3593–3616, https://doi.org/10.5194/bg-21-3593-2024, https://doi.org/10.5194/bg-21-3593-2024, 2024
Short summary
Short summary
To improve the accuracy of spatial carbon exchange estimates, we evaluated simple linear models for net ecosystem exchange (NEE) and gross primary productivity (GPP) and how they can be used to upscale the CO2 exchange of agricultural fields. The models are solely driven by Sentinel-2-derived vegetation indices (VIs). Evaluations show that different VIs have variable power to estimate NEE and GPP of crops in different years. The overall performance is as good as results from complex crop models.
Seyed Reza Saghravani, Michael Ernst Böttcher, Wei-Li Hong, Karol Kuliński, Aivo Lepland, Arunima Sen, and Beata Szymczycha
Earth Syst. Sci. Data, 16, 3419–3431, https://doi.org/10.5194/essd-16-3419-2024, https://doi.org/10.5194/essd-16-3419-2024, 2024
Short summary
Short summary
A comprehensive study conducted in 2021 examined the distributions of dissolved nutrients and carbon in the western Spitsbergen fjords during the high-melting season. Significant spatial variability was observed in the water column and pore water concentrations of constituents, highlighting the unique biogeochemical characteristics of each fjord and their potential impact on ecosystem functioning and oceanographic processes.
Helen Scholz, Gunnar Lischeid, Lars Ribbe, Ixchel Hernandez Ochoa, and Kathrin Grahmann
Hydrol. Earth Syst. Sci., 28, 2401–2419, https://doi.org/10.5194/hess-28-2401-2024, https://doi.org/10.5194/hess-28-2401-2024, 2024
Short summary
Short summary
Sustainable management schemes in agriculture require knowledge of site-specific soil hydrological processes, especially the interplay between soil heterogeneities and crops. We disentangled such effects on soil moisture in a diversified arable field with different crops and management schemes by applying a principal component analysis. The main effects on soil moisture variability were quantified. Meteorological drivers, followed by different seasonal behaviour of crops, had the largest impact.
Henry C. Bittig, Erik Jacobs, Thomas Neumann, and Gregor Rehder
Earth Syst. Sci. Data, 16, 753–773, https://doi.org/10.5194/essd-16-753-2024, https://doi.org/10.5194/essd-16-753-2024, 2024
Short summary
Short summary
We present a pCO2 climatology of the Baltic Sea using a new approach to extrapolate from individual observations to the entire Baltic Sea. The extrapolation approach uses (a) a model to inform on how data at one location are connected to data at other locations, together with (b) very accurate pCO2 observations from 2003 to 2021 as the base data. The climatology can be used e.g. to assess uptake and release of CO2 or to identify extreme events.
Daniel Wesley, Scott Dallimore, Roger MacLeod, Torsten Sachs, and David Risk
The Cryosphere, 17, 5283–5297, https://doi.org/10.5194/tc-17-5283-2023, https://doi.org/10.5194/tc-17-5283-2023, 2023
Short summary
Short summary
The Mackenzie River delta (MRD) is an ecosystem with high rates of methane production from biologic and geologic sources, but little research has been done to determine how often geologic or biogenic methane is emitted to the atmosphere. Stable carbon isotope analysis was used to identify the source of CH4 at several sites. Stable carbon isotope (δ13C-CH4) signatures ranged from −42 to −88 ‰ δ13C-CH4, indicating that CH4 emission in the MRD is caused by biologic and geologic sources.
Carrie L. Thomas, Boris Jansen, Sambor Czerwiński, Mariusz Gałka, Klaus-Holger Knorr, E. Emiel van Loon, Markus Egli, and Guido L. B. Wiesenberg
Biogeosciences, 20, 4893–4914, https://doi.org/10.5194/bg-20-4893-2023, https://doi.org/10.5194/bg-20-4893-2023, 2023
Short summary
Short summary
Peatlands are vital terrestrial ecosystems that can serve as archives, preserving records of past vegetation and climate. We reconstructed the vegetation history over the last 2600 years of the Beerberg peatland and surrounding area in the Thuringian Forest in Germany using multiple analyses. We found that, although the forest composition transitioned and human influence increased, the peatland remained relatively stable until more recent times, when drainage and dust deposition had an impact.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Dorothee C. E. Bakker, Judith Hauck, Peter Landschützer, Corinne Le Quéré, Ingrid T. Luijkx, Glen P. Peters, Wouter Peters, Julia Pongratz, Clemens Schwingshackl, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Simone R. Alin, Peter Anthoni, Leticia Barbero, Nicholas R. Bates, Meike Becker, Nicolas Bellouin, Bertrand Decharme, Laurent Bopp, Ida Bagus Mandhara Brasika, Patricia Cadule, Matthew A. Chamberlain, Naveen Chandra, Thi-Tuyet-Trang Chau, Frédéric Chevallier, Louise P. Chini, Margot Cronin, Xinyu Dou, Kazutaka Enyo, Wiley Evans, Stefanie Falk, Richard A. Feely, Liang Feng, Daniel J. Ford, Thomas Gasser, Josefine Ghattas, Thanos Gkritzalis, Giacomo Grassi, Luke Gregor, Nicolas Gruber, Özgür Gürses, Ian Harris, Matthew Hefner, Jens Heinke, Richard A. Houghton, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Andrew R. Jacobson, Atul Jain, Tereza Jarníková, Annika Jersild, Fei Jiang, Zhe Jin, Fortunat Joos, Etsushi Kato, Ralph F. Keeling, Daniel Kennedy, Kees Klein Goldewijk, Jürgen Knauer, Jan Ivar Korsbakken, Arne Körtzinger, Xin Lan, Nathalie Lefèvre, Hongmei Li, Junjie Liu, Zhiqiang Liu, Lei Ma, Greg Marland, Nicolas Mayot, Patrick C. McGuire, Galen A. McKinley, Gesa Meyer, Eric J. Morgan, David R. Munro, Shin-Ichiro Nakaoka, Yosuke Niwa, Kevin M. O'Brien, Are Olsen, Abdirahman M. Omar, Tsuneo Ono, Melf Paulsen, Denis Pierrot, Katie Pocock, Benjamin Poulter, Carter M. Powis, Gregor Rehder, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Thais M. Rosan, Jörg Schwinger, Roland Séférian, T. Luke Smallman, Stephen M. Smith, Reinel Sospedra-Alfonso, Qing Sun, Adrienne J. Sutton, Colm Sweeney, Shintaro Takao, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Hiroyuki Tsujino, Francesco Tubiello, Guido R. van der Werf, Erik van Ooijen, Rik Wanninkhof, Michio Watanabe, Cathy Wimart-Rousseau, Dongxu Yang, Xiaojuan Yang, Wenping Yuan, Xu Yue, Sönke Zaehle, Jiye Zeng, and Bo Zheng
Earth Syst. Sci. Data, 15, 5301–5369, https://doi.org/10.5194/essd-15-5301-2023, https://doi.org/10.5194/essd-15-5301-2023, 2023
Short summary
Short summary
The Global Carbon Budget 2023 describes the methodology, main results, and data sets used to quantify the anthropogenic emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, land ecosystems, and the ocean over the historical period (1750–2023). These living datasets are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Nele Lehmann, Hugues Lantuit, Michael Ernst Böttcher, Jens Hartmann, Antje Eulenburg, and Helmuth Thomas
Biogeosciences, 20, 3459–3479, https://doi.org/10.5194/bg-20-3459-2023, https://doi.org/10.5194/bg-20-3459-2023, 2023
Short summary
Short summary
Riverine alkalinity in the silicate-dominated headwater catchment at subarctic Iskorasfjellet, northern Norway, was almost entirely derived from weathering of minor carbonate occurrences in the riparian zone. The uphill catchment appeared limited by insufficient contact time of weathering agents and weatherable material. Further, alkalinity increased with decreasing permafrost extent. Thus, with climate change, alkalinity generation is expected to increase in this permafrost-degrading landscape.
Mélissa Laurent, Matthias Fuchs, Tanja Herbst, Alexandra Runge, Susanne Liebner, and Claire C. Treat
Biogeosciences, 20, 2049–2064, https://doi.org/10.5194/bg-20-2049-2023, https://doi.org/10.5194/bg-20-2049-2023, 2023
Short summary
Short summary
In this study we investigated the effect of different parameters (temperature, landscape position) on the production of greenhouse gases during a 1-year permafrost thaw experiment. For very similar carbon and nitrogen contents, our results show a strong heterogeneity in CH4 production, as well as in microbial abundance. According to our study, these differences are mainly due to the landscape position and the hydrological conditions established as a result of the topography.
Laura Clark, Ian B. Strachan, Maria Strack, Nigel T. Roulet, Klaus-Holger Knorr, and Henning Teickner
Biogeosciences, 20, 737–751, https://doi.org/10.5194/bg-20-737-2023, https://doi.org/10.5194/bg-20-737-2023, 2023
Short summary
Short summary
We determine the effect that duration of extraction has on CO2 and CH4 emissions from an actively extracted peatland. Peat fields had high net C emissions in the first years after opening, and these then declined to half the initial value for several decades. Findings contribute to knowledge on the atmospheric burden that results from these activities and are of use to industry in their life cycle reporting and government agencies responsible for greenhouse gas accounting and policy.
Damian L. Arévalo-Martínez, Amir Haroon, Hermann W. Bange, Ercan Erkul, Marion Jegen, Nils Moosdorf, Jens Schneider von Deimling, Christian Berndt, Michael Ernst Böttcher, Jasper Hoffmann, Volker Liebetrau, Ulf Mallast, Gudrun Massmann, Aaron Micallef, Holly A. Michael, Hendrik Paasche, Wolfgang Rabbel, Isaac Santos, Jan Scholten, Katrin Schwalenberg, Beata Szymczycha, Ariel T. Thomas, Joonas J. Virtasalo, Hannelore Waska, and Bradley A. Weymer
Biogeosciences, 20, 647–662, https://doi.org/10.5194/bg-20-647-2023, https://doi.org/10.5194/bg-20-647-2023, 2023
Short summary
Short summary
Groundwater flows at the land–ocean transition and the extent of freshened groundwater below the seafloor are increasingly relevant in marine sciences, both because they are a highly uncertain term of biogeochemical budgets and due to the emerging interest in the latter as a resource. Here, we discuss our perspectives on future research directions to better understand land–ocean connectivity through groundwater and its potential responses to natural and human-induced environmental changes.
Daniel L. Pönisch, Anne Breznikar, Cordula N. Gutekunst, Gerald Jurasinski, Maren Voss, and Gregor Rehder
Biogeosciences, 20, 295–323, https://doi.org/10.5194/bg-20-295-2023, https://doi.org/10.5194/bg-20-295-2023, 2023
Short summary
Short summary
Peatland rewetting is known to reduce dissolved nutrients and greenhouse gases; however, short-term nutrient leaching and high CH4 emissions shortly after rewetting are likely to occur. We investigated the rewetting of a coastal peatland with brackish water and its effects on nutrient release and greenhouse gas fluxes. Nutrient concentrations were higher in the peatland than in the adjacent bay, leading to an export. CH4 emissions did not increase, which is in contrast to freshwater rewetting.
Thomas Neumann, Hagen Radtke, Bronwyn Cahill, Martin Schmidt, and Gregor Rehder
Geosci. Model Dev., 15, 8473–8540, https://doi.org/10.5194/gmd-15-8473-2022, https://doi.org/10.5194/gmd-15-8473-2022, 2022
Short summary
Short summary
Marine ecosystem models are usually constrained by the elements nitrogen and phosphorus and consider carbon in organic matter in a fixed ratio. Recent observations show a substantial deviation from the simulated carbon cycle variables. In this study, we present a marine ecosystem model for the Baltic Sea which allows for a flexible uptake ratio for carbon, nitrogen, and phosphorus. With this extension, the model reflects much more reasonable variables of the marine carbon cycle.
Matthias Koschorreck, Klaus Holger Knorr, and Lelaina Teichert
Biogeosciences, 19, 5221–5236, https://doi.org/10.5194/bg-19-5221-2022, https://doi.org/10.5194/bg-19-5221-2022, 2022
Short summary
Short summary
At low water levels, parts of the bottom of rivers fall dry. These beaches or mudflats emit the greenhouse gas carbon dioxide (CO2) to the atmosphere. We found that those emissions are caused by microbial reactions in the sediment and that they change with time. Emissions were influenced by many factors like temperature, water level, rain, plants, and light.
Henning Teickner and Klaus-Holger Knorr
SOIL, 8, 699–715, https://doi.org/10.5194/soil-8-699-2022, https://doi.org/10.5194/soil-8-699-2022, 2022
Short summary
Short summary
The chemical quality of biomass can be described with holocellulose (relatively easily decomposable by microorganisms) and Klason lignin (relatively recalcitrant) contents. Measuring both is laborious. In a recent study, models have been proposed which can predict both quicker from mid-infrared spectra. However, it has not been analyzed if these models make correct predictions for biomass in soils and how to improve them. We provide such a validation and a strategy for their improvement.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
Short summary
Short summary
Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Lutz Beckebanze, Benjamin R. K. Runkle, Josefine Walz, Christian Wille, David Holl, Manuel Helbig, Julia Boike, Torsten Sachs, and Lars Kutzbach
Biogeosciences, 19, 3863–3876, https://doi.org/10.5194/bg-19-3863-2022, https://doi.org/10.5194/bg-19-3863-2022, 2022
Short summary
Short summary
In this study, we present observations of lateral and vertical carbon fluxes from a permafrost-affected study site in the Russian Arctic. From this dataset we estimate the net ecosystem carbon balance for this study site. We show that lateral carbon export has a low impact on the net ecosystem carbon balance during the complete study period (3 months). Nevertheless, our results also show that lateral carbon export can exceed vertical carbon uptake at the beginning of the growing season.
Bryce Van Dam, Nele Lehmann, Mary A. Zeller, Andreas Neumann, Daniel Pröfrock, Marko Lipka, Helmuth Thomas, and Michael Ernst Böttcher
Biogeosciences, 19, 3775–3789, https://doi.org/10.5194/bg-19-3775-2022, https://doi.org/10.5194/bg-19-3775-2022, 2022
Short summary
Short summary
We quantified sediment–water exchange at shallow sites in the North and Baltic seas. We found that porewater irrigation rates in the former were approximately twice as high as previously estimated, likely driven by relatively high bioirrigative activity. In contrast, we found small net fluxes of alkalinity, ranging from −35 µmol m−2 h−1 (uptake) to 53 µmol m−2 h−1 (release). We attribute this to low net denitrification, carbonate mineral (re-)precipitation, and sulfide (re-)oxidation.
Cordula Nina Gutekunst, Susanne Liebner, Anna-Kathrina Jenner, Klaus-Holger Knorr, Viktoria Unger, Franziska Koebsch, Erwin Don Racasa, Sizhong Yang, Michael Ernst Böttcher, Manon Janssen, Jens Kallmeyer, Denise Otto, Iris Schmiedinger, Lucas Winski, and Gerald Jurasinski
Biogeosciences, 19, 3625–3648, https://doi.org/10.5194/bg-19-3625-2022, https://doi.org/10.5194/bg-19-3625-2022, 2022
Short summary
Short summary
Methane emissions decreased after a seawater inflow and a preceding drought in freshwater rewetted coastal peatland. However, our microbial and greenhouse gas measurements did not indicate that methane consumers increased. Rather, methane producers co-existed in high numbers with their usual competitors, the sulfate-cycling bacteria. We studied the peat soil and aimed to cover the soil–atmosphere continuum to better understand the sources of methane production and consumption.
Liam Heffernan, Maria A. Cavaco, Maya P. Bhatia, Cristian Estop-Aragonés, Klaus-Holger Knorr, and David Olefeldt
Biogeosciences, 19, 3051–3071, https://doi.org/10.5194/bg-19-3051-2022, https://doi.org/10.5194/bg-19-3051-2022, 2022
Short summary
Short summary
Permafrost thaw in peatlands leads to waterlogged conditions, a favourable environment for microbes producing methane (CH4) and high CH4 emissions. High CH4 emissions in the initial decades following thaw are due to a vegetation community that produces suitable organic matter to fuel CH4-producing microbes, along with warm and wet conditions. High CH4 emissions after thaw persist for up to 100 years, after which environmental conditions are less favourable for microbes and high CH4 emissions.
Ramona J. Heim, Andrey Yurtaev, Anna Bucharova, Wieland Heim, Valeriya Kutskir, Klaus-Holger Knorr, Christian Lampei, Alexandr Pechkin, Dora Schilling, Farid Sulkarnaev, and Norbert Hölzel
Biogeosciences, 19, 2729–2740, https://doi.org/10.5194/bg-19-2729-2022, https://doi.org/10.5194/bg-19-2729-2022, 2022
Short summary
Short summary
Fires will probably increase in Arctic regions due to climate change. Yet, the long-term effects of tundra fires on carbon (C) and nitrogen (N) stocks and cycling are still unclear. We investigated the long-term fire effects on C and N stocks and cycling in soil and aboveground living biomass.
We found that tundra fires did not affect total C and N stocks because a major part of the stocks was located belowground in soils which were largely unaltered by fire.
Pierre Friedlingstein, Matthew W. Jones, Michael O'Sullivan, Robbie M. Andrew, Dorothee C. E. Bakker, Judith Hauck, Corinne Le Quéré, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Rob B. Jackson, Simone R. Alin, Peter Anthoni, Nicholas R. Bates, Meike Becker, Nicolas Bellouin, Laurent Bopp, Thi Tuyet Trang Chau, Frédéric Chevallier, Louise P. Chini, Margot Cronin, Kim I. Currie, Bertrand Decharme, Laique M. Djeutchouang, Xinyu Dou, Wiley Evans, Richard A. Feely, Liang Feng, Thomas Gasser, Dennis Gilfillan, Thanos Gkritzalis, Giacomo Grassi, Luke Gregor, Nicolas Gruber, Özgür Gürses, Ian Harris, Richard A. Houghton, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Ingrid T. Luijkx, Atul Jain, Steve D. Jones, Etsushi Kato, Daniel Kennedy, Kees Klein Goldewijk, Jürgen Knauer, Jan Ivar Korsbakken, Arne Körtzinger, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Sebastian Lienert, Junjie Liu, Gregg Marland, Patrick C. McGuire, Joe R. Melton, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Yosuke Niwa, Tsuneo Ono, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Thais M. Rosan, Jörg Schwinger, Clemens Schwingshackl, Roland Séférian, Adrienne J. Sutton, Colm Sweeney, Toste Tanhua, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco Tubiello, Guido R. van der Werf, Nicolas Vuichard, Chisato Wada, Rik Wanninkhof, Andrew J. Watson, David Willis, Andrew J. Wiltshire, Wenping Yuan, Chao Yue, Xu Yue, Sönke Zaehle, and Jiye Zeng
Earth Syst. Sci. Data, 14, 1917–2005, https://doi.org/10.5194/essd-14-1917-2022, https://doi.org/10.5194/essd-14-1917-2022, 2022
Short summary
Short summary
The Global Carbon Budget 2021 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Elodie Salmon, Fabrice Jégou, Bertrand Guenet, Line Jourdain, Chunjing Qiu, Vladislav Bastrikov, Christophe Guimbaud, Dan Zhu, Philippe Ciais, Philippe Peylin, Sébastien Gogo, Fatima Laggoun-Défarge, Mika Aurela, M. Syndonia Bret-Harte, Jiquan Chen, Bogdan H. Chojnicki, Housen Chu, Colin W. Edgar, Eugenie S. Euskirchen, Lawrence B. Flanagan, Krzysztof Fortuniak, David Holl, Janina Klatt, Olaf Kolle, Natalia Kowalska, Lars Kutzbach, Annalea Lohila, Lutz Merbold, Włodzimierz Pawlak, Torsten Sachs, and Klaudia Ziemblińska
Geosci. Model Dev., 15, 2813–2838, https://doi.org/10.5194/gmd-15-2813-2022, https://doi.org/10.5194/gmd-15-2813-2022, 2022
Short summary
Short summary
A methane model that features methane production and transport by plants, the ebullition process and diffusion in soil, oxidation to CO2, and CH4 fluxes to the atmosphere has been embedded in the ORCHIDEE-PEAT land surface model, which includes an explicit representation of northern peatlands. This model, ORCHIDEE-PCH4, was calibrated and evaluated on 14 peatland sites. Results show that the model is sensitive to temperature and substrate availability over the top 75 cm of soil depth.
Hanna K. Lappalainen, Tuukka Petäjä, Timo Vihma, Jouni Räisänen, Alexander Baklanov, Sergey Chalov, Igor Esau, Ekaterina Ezhova, Matti Leppäranta, Dmitry Pozdnyakov, Jukka Pumpanen, Meinrat O. Andreae, Mikhail Arshinov, Eija Asmi, Jianhui Bai, Igor Bashmachnikov, Boris Belan, Federico Bianchi, Boris Biskaborn, Michael Boy, Jaana Bäck, Bin Cheng, Natalia Chubarova, Jonathan Duplissy, Egor Dyukarev, Konstantinos Eleftheriadis, Martin Forsius, Martin Heimann, Sirkku Juhola, Vladimir Konovalov, Igor Konovalov, Pavel Konstantinov, Kajar Köster, Elena Lapshina, Anna Lintunen, Alexander Mahura, Risto Makkonen, Svetlana Malkhazova, Ivan Mammarella, Stefano Mammola, Stephany Buenrostro Mazon, Outi Meinander, Eugene Mikhailov, Victoria Miles, Stanislav Myslenkov, Dmitry Orlov, Jean-Daniel Paris, Roberta Pirazzini, Olga Popovicheva, Jouni Pulliainen, Kimmo Rautiainen, Torsten Sachs, Vladimir Shevchenko, Andrey Skorokhod, Andreas Stohl, Elli Suhonen, Erik S. Thomson, Marina Tsidilina, Veli-Pekka Tynkkynen, Petteri Uotila, Aki Virkkula, Nadezhda Voropay, Tobias Wolf, Sayaka Yasunaka, Jiahua Zhang, Yubao Qiu, Aijun Ding, Huadong Guo, Valery Bondur, Nikolay Kasimov, Sergej Zilitinkevich, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys., 22, 4413–4469, https://doi.org/10.5194/acp-22-4413-2022, https://doi.org/10.5194/acp-22-4413-2022, 2022
Short summary
Short summary
We summarize results during the last 5 years in the northern Eurasian region, especially from Russia, and introduce recent observations of the air quality in the urban environments in China. Although the scientific knowledge in these regions has increased, there are still gaps in our understanding of large-scale climate–Earth surface interactions and feedbacks. This arises from limitations in research infrastructures and integrative data analyses, hindering a comprehensive system analysis.
Karol Kuliński, Gregor Rehder, Eero Asmala, Alena Bartosova, Jacob Carstensen, Bo Gustafsson, Per O. J. Hall, Christoph Humborg, Tom Jilbert, Klaus Jürgens, H. E. Markus Meier, Bärbel Müller-Karulis, Michael Naumann, Jørgen E. Olesen, Oleg Savchuk, Andreas Schramm, Caroline P. Slomp, Mikhail Sofiev, Anna Sobek, Beata Szymczycha, and Emma Undeman
Earth Syst. Dynam., 13, 633–685, https://doi.org/10.5194/esd-13-633-2022, https://doi.org/10.5194/esd-13-633-2022, 2022
Short summary
Short summary
The paper covers the aspects related to changes in carbon, nitrogen, and phosphorus (C, N, P) external loads; their transformations in the coastal zone; changes in organic matter production (eutrophication) and remineralization (oxygen availability); and the role of sediments in burial and turnover of C, N, and P. Furthermore, this paper also focuses on changes in the marine CO2 system, the structure of the microbial community, and the role of contaminants for biogeochemical processes.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St. Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data, 14, 179–208, https://doi.org/10.5194/essd-14-179-2022, https://doi.org/10.5194/essd-14-179-2022, 2022
Short summary
Short summary
The effects of climate warming on carbon cycling across the Arctic–boreal zone (ABZ) remain poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic–boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Hao Tang, Susanne Liebner, Svenja Reents, Stefanie Nolte, Kai Jensen, Fabian Horn, and Peter Mueller
Biogeosciences, 18, 6133–6146, https://doi.org/10.5194/bg-18-6133-2021, https://doi.org/10.5194/bg-18-6133-2021, 2021
Short summary
Short summary
We examined if sea-level rise and plant genotype interact to affect soil microbial functioning in a mesocosm experiment using two genotypes of a dominant salt-marsh grass characterized by differences in flooding sensitivity. Larger variability in microbial community structure, enzyme activity, and litter breakdown in soils with the more sensitive genotype supports our hypothesis that effects of climate change on soil microbial functioning can be controlled by plant intraspecific adaptations.
Martti Honkanen, Jens Daniel Müller, Jukka Seppälä, Gregor Rehder, Sami Kielosto, Pasi Ylöstalo, Timo Mäkelä, Juha Hatakka, and Lauri Laakso
Ocean Sci., 17, 1657–1675, https://doi.org/10.5194/os-17-1657-2021, https://doi.org/10.5194/os-17-1657-2021, 2021
Short summary
Short summary
The exchange of carbon dioxide (CO2) between the sea and the atmosphere is regulated by the gradient of CO2 partial pressure (pCO2) between the sea and the air. The daily variation of the seawater pCO2 recorded at the fixed station Utö in the Baltic Sea was found to be mainly biologically driven. Calculation of the annual net exchange of CO2 between the sea and atmosphere based on daily measurements of pCO2 carried out using the same sampling time every day could introduce a bias of up to 12 %.
Cited articles
Abdalla, M., Hastings, A., Truu, J., Espenberg, M., Mander, U., and Smith,
P.: Emissions of methane from northern peatlands: a review of management
impacts and implications for future management options, Ecol. Evol., 6, 7080–7102, https://doi.org/10.1002/ece3.2469, 2016.
Agethen, S. and Knorr, K.-H.: Juncus effusus mono-stands in restored cutover
peat bogs – Analysis of litter quality, controls of anaerobic
decomposition, and the risk of secondary carbon loss, Soil Biology and
Biochemistry, 117, 139–152, https://doi.org/10.1016/j.soilbio.2017.11.020, 2018.
Augustin, J. and Chojnicki, B.: Austausch von klimarelevanten Spurengasen,
Klimawirkung und Kohlenstoffdynamik in den ersten Jahren nach der
Wiedervernässung von degradiertem Niedermoorgrünland (Exchange of
climate relevant trace gases, climate effect and carbon dynamics in the
first years after re-wetting of degraded fen grassland), in: Phosphor- und Kohlenstoff- Dynamik und
Vegetationsentwicklung in wiedervernässten Mooren des Peenetals in
Mecklenburg-Vorpommern (Phosphorus and carbon dynamics and vegetation
development in re-wetted peatland of the Peene valley in Mecklenburg-Western
Pomerania), edited by: Gelbrecht, J.,
Zak, D., and Augustin, J., Leibniz-Institut für Gewässerökologie und
Binnenfischerei, Berlin, 50–67, 2008 (in German).
Augustin, J., Merbach, W., and Rogasik, J.: Factors influencing nitrous
oxide and methane emissions from minerotrophic fens in northeast Germany,
Biol. Fert. Soils, 28, 1–4, https://doi.org/10.1007/s003740050455, 1998.
Blodau, C.: Thermodynamic control on terminal electron transfer and
methanogenesis, in: Aquatic Redox Chemistry, ACS Symposium Series, edited by: Tratnyek, P. G., Grundl, T. J., and Haderlein, S. B., American Chemical
Society, Oxford University Press Inc., Washington,
D.C., 65–82, https://doi.org/10.1021/bk-2011-1071.ch004, 2011.
Bolger, A. M., Lohse, M., and Usadel, B.: Trimmomatic: a flexible trimmer
for Illumina sequence data, Bioinformatics, 30, 2114–2120,
https://doi.org/10.1093/bioinformatics/btu170, 2014.
Bridgham, S. D., Cadillo-Quiroz, H., Keller, J. K., and Zhuang, Q.: Methane
emissions from wetlands: biogeochemical, microbial, and modeling
perspectives from local to global scales, Global Change Biol., 19,
1325–1356, https://doi.org/10.1111/gcb.12131, 2013.
Cadillo-Quiroz, H., Yashiro, E., Yavitt, J. B., and Zinder, S. H.:
Characterization of the archaeal community in a minerotrophic fen and
terminal restriction fragment length polymorphism-directed isolation of a
novel hydrogenotrophic methanogen, Appl. Environ. Microb.
74, 2059–2068, https://doi.org/10.1128/AEM.02222-07, 2008.
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.
D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon,
J. I., Huttley, G. A., Kelley, S. T., Knights, D., Koenig, J. E., Ley, R.
E., Lozupone, C. A., McDonald, D., Muegge, B. D., Pirrung, M., Reeder, J.,
Sevinsky, J. R., Turnbaugh, P. J., Walters, W. A., Widmann, J., Yatsunenko,
T., Zaneveld, J., and Knight, R.: QIIME allows analysis of high-throughput
community sequencing data, Nat. Methods, 7, 335–336,
https://doi.org/10.1038/nmeth.f.303, 2010.
Chambers, L. G., Guevara, R., Boyer, J. N., Troxler, T. G., and Davis, S.
E.: Effects of salinity and inundation on microbial community structure and
function in a mangrove peat soil, Wetlands, 36, 361–371,
https://doi.org/10.1007/s13157-016-0745-8, 2016.
Chasar, L. S., Chanton, J. P., Glaser, P. H., and Siegel, D. I.: Methane
concentration and stable isotope distribution as evidence of rhizospheric
processes: comparison of a fen and bog in the Glacial Lake Agassiz Peatland
complex, Ann. Bot.-London, 86, 655–663, https://doi.org/10.1006/anbo.2000.1172, 2000.
Cheema, S., Zeyer, J., and Henneburger, R.: Methanotrophic and methanogenic
communities in Swiss alpine fens dominated by Carex rostrata and Eriphorum
angustifolium, Appl. Environ. Microb., 81, 5832–5844,
https://doi.org/10.1128/AEM.01519-15, 2015.
Conrad, R.: Soil microorganisms as controllers of atmospheric trace gases
(H2, CO, CH4, OCS, N2O, and NO), Microbiol. Rev.,
60, 609–640, 1996.
Degelmann, D. M., Borken, W., Drake, H. L., and Kolb, S.: Different
atmospheric methane-oxidizing communities in European beech and Norway
spruce soils, Appl. Environ. Microb., 76, 3228–3235,
https://doi.org/10.1128/AEM.02730-09, 2010.
Emsens, W.-J., Aggenbach, C. J. S., Schoutens, K., Smolders, A. J. P., Zak,
D., and van Diggelen, R.: Soil iron content as a predictor of carbon and
nutrient mobilization in rewetted fens, PLoS ONE, 11, e0153166,
https://doi.org/10.1371/journal.pone.0153166, 2016.
Ettwig, K. F., Zhu, B., Speth, D., Keltjens, J. T., Jetten, M. S. M., and Kartal, B.:
Archaea catalyze iron-dependent anaerobic oxidation of methane, P. Natl. Acad. Sci. USA, 113, 12792–12796, https://doi.org/10.1073/pnas.1609534113, 2016.
Franchini, A. G., Henneberger, R., Aeppli, M., and Zeyer, J.: Methane
dynamics in an alpine fen: a field-based study on methanogenic and
methanotrophic microbial communities, FEMS Microbiology Ecology, 91,
1–13, https://doi.org/10.1093/femsec/fiu032, 2015.
Franz, D., Koebsch, F., Larmanou, E., Augustin, J., and Sachs, T.: High net CO2
and CH4 release at a eutrophic shallow lake on a formerly drained fen, Biogeosciences, 13, 3051–3070, https://doi.org/10.5194/bg-13-3051-2016, 2016.
Freitag, T. E. and Prosser, J. I.: Correlation of methane production and
functional gene transcription activity in a peat soil, Appl. Environ. Microb., 75, 6679–6687, https://doi.org/10.1128/AEM.01021-09,
2009.
Freitag, T. E., Toet, S., Ineson, P., and Prosser, J. I.: Links between
methane flux and transcriptional activities of methanogens and methane
oxidizers in a blanket peat bog, FEMS Microbiology Ecology, 73, 157–165,
https://doi.org/10.1111/j.1574-6941.2010.00871.x, 2010.
Galand, P. E., Saarnio, S., Fritze, H., and Yrjälä, K.: Depth
related diversity of methanogen Archaea in Finnish oligotrophic fen, FEMS
Microbiology Ecology, 42, 441–449, https://doi.org/10.1111/j.1574-6941.2002.tb01033.x,
2002.
Galand, P. E., Fritze, H., Conrad, R., and Yrjälä, K.: Pathways for
methanogenesis and diversity of methanogenic archaea in three boreal
peatland ecosystems, Appl. Environ. Microb., 71,
2195–2198, https://doi.org/10.1128/AEM.71.4.2195-2198.2005, 2005.
Hahn, J., Köhler, S., Glatzel, S., and Jurasinski, G.: Methane exchange
in a coastal fen the first year after flooding – a systems shift, PLoS ONE,
10, e0140657, https://doi.org/10.1371/journal.pone.0140657, 2015.
Hahn-Schöfl, M., Zak, D., Minke, M., Gelbrecht, J., Augustin, J., and Freibauer, A.:
Organic sediment formed during inundation of a degraded fen grassland
emits large fluxes of CH4 and CO2, Biogeosciences, 8, 1539–1550, https://doi.org/10.5194/bg-8-1539-2011, 2011.
Haroon, M. F., Hu, S., Shi, Y., Imelfort, M., Keller, J., Hugenholtz, P.,
Yuan, Z., and Tyson, G.: Anaerobic oxidation of methane couple to nitrate
reduction in a novel archaeal lineage, Nature, 500, 567–570,
https://doi.org/10.1038/nature12375, 2013.
He, S., Malfatti, S. A., McFarland, J. W., Anderson, F. E., Pati, A.,
Huntemann, M., Tremblay, J., del Rio, T. G., Waldrop, M. P., Windham-Myers,
L., and Tringe, S. G.: Patterns in wetland microbial community composition
and functional gene repertoire associated with methane emissions, mBio,
6, 1–15, https://doi.org/10.1128/mBio.00066-15, 2015.
Herlemann, D. P., Labrenz, M., Jürgens, K., Bertilsson, S., Waniek, J.
J., and Andersson, A. F.: Transitions in bacterial communities along the 2000 km
salinity gradient of the Baltic Sea, ISME J., 5, 1571–1579,
https://doi.org/10.1038/ismej.2011.41, 2011.
Hernandez, M. E., Beck, D. A., Lidstrom, M. E., and Chistoserdova, L.:
Oxygen availability is a major factor in determining the composition of
microbial communities involved in methane oxidation, PeerJ, 3, e801,
https://doi.org/10.7717/peerj.801, 2015.
Hoehler, T. M., Alperin, M. J., Albert, D. B., and Martens, C. S.: Apparent
minimum free energy requirements for methanogenic Archaea and
sulfate-reducing bacteria in an anoxic marine sediment, FEMS Microbiology
Ecology, 38, 33–41, https://doi.org/10.1016/S0168-6496(01)00175-1, 2001.
Jerman, V., Metje, M., Mandic-Mulec, I., and Frenzel, P.: Wetland restoration and
methanogenesis: the activity of microbial populations and competition for
substrates at different temperatures, Biogeosciences, 6, 1127–1138, https://doi.org/10.5194/bg-6-1127-2009, 2009.
Joosten, H., Brust, K., Couwenberg, J., Gerner, A., Holsten, B., Permien,
T., Schäfer, A., Tanneberger, F., Trepel, M., and Wahren, A.:
MoorFutures® Integration of additional ecosystem services
(including biodiversity) into carbon credits – standard, methodology and
transferability to other regions, Bundesamt für Naturschutz (Federal
Ministry for the Environment, BfN), BfN-Skripten 407, Bonn, Germany, 2015.
Juottonen, H., Galand, P. E., Tuittila, E.-S., Laine, J., Fritze, H.,
and Yrjälä, K.: Methanogen communities and bacteria along an
ecohydrological gradient in a northern raised bog complex, Environ.
Microbiol., 7, 1547–1557, https://doi.org/10.3389/fmicb.2015.00356, 2005.
Juottonen, H., Hynninen, A., Nieminen, M., Tuomivirta, T. T., Tuittila,
E.-S., Nousiainen, H., Kell, D. K., Yrjälä, K., Tervahauta, A., and
Fritze, H.: Methane-cycling microbial communities and methane emission in
natural and restored peatlands, Appl. Environ. Microb.,
78, 6386–6389, https://doi.org/10.1128/AEM.00261-12, 2012.
Jurasinski, G., Glatzel, S., Hahn, J., Koch, S., Koch, M., and Koebsch, F.:
Turn on, fade out – Methane exchange in a coastal fen over a period of six
years after rewetting, Geophys. Res. Abstr., 18, EGU2016-14899,
2016.
Keller, J. K. and Bridgham, S. D.: Pathways of anaerobic carbon cycling
across an ombrotrophic-minerotrophic peatland gradient, Limnol.
Oceanogr., 52, 96–107, https://doi.org/10.4319/lo.2007.52.1.0096, 2007.
Kelly, C. A., Dice, N. B., and Martens, C. S.: Temporal variations in the
stable carbon isotopic composition of methane emitted from Minnesota
peatlands, Global Biogeochem. Cy., 6, 263–269,
https://doi.org/10.1029/92GB01478, 1992.
Knorr, K.-H. and Blodau, C.: Impact of experimental drought and rewetting on
redox transformations and methanogenesis in mesocosms of a northern fen
soil, Soil Biology and Biochemistry, 41, 1187–1198,
https://doi.org/10.1016/j.soilbio.2009.02.030, 2009.
Knorr, K.-H., Lischeid, G., and Blodau, C.: Dynamics of redox processes in a
minerotrophic fen exposed to a water table manipulation, Geoderma, 153,
379–392, https://doi.org/10.1016/j.geoderma.2009.08.023, 2009.
Koch, M., Koebsch, F., Hahn, J., and Jurasinski, G.: From meadow to shallow
lake: Monitoring secondary succession in a coastal fen after rewetting by
flooding based on aerial imagery and plot data, Mires Peat, 19,
1–17, https://doi.org/10.19189/MaP.2015.OMB.188, 2017.
Koebsch, F., Glatzel, S., and Jurasinski, G.: Vegetation controls emissions
in a coastal brackish fen, Wetl. Ecol. Manag., 21, 323–337,
https://doi.org/10.1007/s11273-013-9304-8, 2013.
Koebsch, F., Jurasinski, G., Koch, M., Hofmann, J., and Glatzel, S.:
Controls for multi-scale temporal variation in ecosystem methane exchange
during the growing season of a permanently inundated fen, Agr. Forest Meteorol., 204, 94–105, https://doi.org/10.1016/j.agrformet.2015.02.002, 2015.
Kolb, S., Knief, C., Stubner, S., and Conrad, R.: Quantitative detection of
methanotrophs in soil by novel pmoA-targeted real-time PCR assays, Appl. Environ. Microb., 69, 2423–2429,
https://doi.org/10.1128/AEM.69.5.2423-2429.2003, 2003.
Komulainen, V.-M., Nykanen, H., Martikainen, P. J., and Laine, J.:
Short-term effect of restoration on vegetation change and methane emissions
from peatlands drained for forestry in southern Finland, Can. J.
Forest Res., 28, 402–411, https://doi.org/10.1139/x98-011, 1998.
Kowalski, N., Dellwig, O., Beck, M., Grunwald, M., Dürselen, C-D.,
Badewien, T. H., Brumsack, H-J., van Beusekom, J. E. E., and Böttcher,
M. E.: A comparative study of manganese dynamics in the water column and
sediments of intertidal systems of the North Sea, Estuarine, Coast.
Shelf Sci., 100, 3–17, https://doi.org/10.1016/j.ecss.2011.03.011, 2012.
Le Mer, J. and Roger. P.: Production, oxidation, emission, and consumption
of methane by soils: a review, Eur. J. Soil Biol., 37, 25–50,
https://doi.org/10.1016/S1164-5563(01)01067-6, 2001.
Liebner, S., Schwarzenbach, S. P., and Zeyer, J.: Methane emissions from an
alpine fen in central Switzerland, Biogeochemistry, 109, 287–299,
https://doi.org/10.1007/s10533-011-9629-4, 2012.
Liebner, S., Ganzert, L., Kiss, A., Yang, S., Wagner, D., and Svenning, M.
M.: Shifts in methanogenic community composition and methane fluxes along
the degradation of discontinuous permafrost, Front. Microbiol.,
6, 1–10, https://doi.org/10.3389/fmicb.2015.00356, 2015.
Liu, D. Y., Ding, W. X., Jia, Z. J., and Cai, Z. C.: Relation between methanogenic
archaea and methane production potential in selected natural
wetland ecosystems across China, Biogeosciences, 8, 329–338, https://doi.org/10.5194/bg-8-329-2011, 2011.
Martin, M.: Cutadapt removes adapter sequences from high-throughput
sequencing reads, EMBnet. Journal, 17, 10–12, https://doi.org/10.14806/ej.17.1.200,
2011.
McDonald, D., Price, M. N., Goodrich, J., Nawrocki, E. P., DeSantis, T. Z.,
Probst, A., Andersen, G. L., Knight, R., and Hugenholtz, P.: An improved
Greengenes taxonomy with explicit ranks for ecological and evolutionary
analyses of bacteria and archaea, ISME J,, 6, 610–618,
https://doi.org/10.1038/2Fismej.2011.139, 2012.
Megonigal, J. P., Mines, M. E., and Visscher, P. T.: Anaerobic metabolism:
linkages to trace gases and aerobic processes, in:
Biogeochemistry, edited by: Schlesinger, W. H., Elsevier, Oxford, UK, 350–362, 2005.
Minke, M., Augustin, J., Burlo, A., Yarmashuk, T., Chuvashova, H., Thiele, A.,
Freibauer, A., Tikhonov, V., and Hoffmann, M.: Water level, vegetation
composition, and plant productivity explain greenhouse gas fluxes in temperate
cutover fens after inundation, Biogeosciences, 13, 3945–3970, https://doi.org/10.5194/bg-13-3945-2016, 2016.
Myhre, G., Shindell, D., Breon, F.-M., Collins, W., Fuglestvedt, J., Huang,
J., Koch, D., Lamarque, J.-F., Lee, D., Mendoza, B., Nakajima, T., Robock,
A., Rotstayn, L., Stephens, G., and Zhang, H.: Anthropogenic and natural
radiative forcing. Chapter 8, in: Climate Change 2013. The Physical Science Basis.
Contribution of Working Group I to the Fifth Assessment Report of the
Intergovermental Panel on Climate Change, edited by: Stocker, T. F., Qin, D., Plattner, G.-K.,
Tignor, M., Allen, D., Boschung, J., Nauels, A., Xia, Y., Bex, V., and
Midgley, P. M., Cambridge University Press,
Cambridge, UK and New York, USA, 659–740, 2013.
Narrowe, A. B., Angle, J. C., Daly, R. A., Stefanik, K. C., Wrighton, K. C.,
and Miller, C. S.: High-resolution sequencing reveals unexplored archaeal
diversity in freshwater wetland soils, Environ. Microbiol., 19,
2192–2209, https://doi.org/10.1111/1462-2920.13703, 2017.
Oksanen, J., Blanchet, F. G., Friendly, M., Kindt, R., Legendre, P.,
McGlinn, D., Minchin, P. R., O'Hara, R. B., Simpson, G. L., Solymos,
Stevens, M. H. H., Szoecs, E., and Wagner, H.: vegan: Community Ecology
Package, R package version 2.4-5,
available at: https://CRAN.R-project.org/package=vegan (last access: 1 October 2018), 2017.
Putkinen, A., Tuittila, E.-S., Siljanen, H. M. P., Bodrossy, L., and Fritze,
H.: Recovery of methane turnover and the associated microbial communities in
restored cutover peatlands is strongly linked with increasing sphagnum
abundance, Soil Biology and Biochemistry, 116, 110–119, https://doi.org/10.1016/j.soilbio.2017.10.005, 2018.
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P.,
Peplies, J., and Glöckner, F. O.: The SILVA ribosomal RNA gene database
project: improved data processing and web-based tools, Nucleic Acids
Res., 41, D590–596, https://doi.org/10.1093/nar/gks1219, 2013.
Raghoebarsing, A. A., Pol, A., van de Pas-Schoonen, K. T., Smolders, A. J.
P., Ettwig, K. F., Rijpstra, W. I. C., Schouten, S., Damste, J. S. S., Op
den Camp, H. J. M., Jetten, M. S. M., and Strous, M.: A microbial consortium
couples anaerobic methane oxidation to denitrification, Nature, 440,
918–921, https://doi.org/10.1038/nature04617, 2006.
R Core Team: R: A language and environment for statistical computing. R
Foundation for Statistical Computing, Vienna, Austria,
available at: https://www.R-project.org/ (last access: 1 October 2018), 2017.
Schemel, L.: Simplified conversions between specific conductance and
salinity units for use with data from monitoring stations, Interagency
Ecological Program Newsletter, 14, 17–18, 2001.
Schönfeld-Bockholt, R., Roth, D., and Dittmann, L.: Ch. Teilflächenbezogene ökologische
und futterwirtschaftliche Beurteilung des Grünlandes im Naturschutzgebiet Heiligensee und Hütelmoor, in:
Effiziente Nutzung von Grünland als Ressource für die Milch- und Fleischproduktion Mitteilungen
der Arbeitsgemeinschaft Grünland und Futterbau, Zollikofen, Switzerland, 2008.
Segers, R.: Methane production and methane consumption: a review of
processes underlying wetland methane fluxes, Biogeochemistry, 41, 23–51,
https://doi.org/10.1023/A:1005929032764, 1998.
Steffenhagen, P., Zak, D., Schulz, K., Timmerman, T., and Zerbe, S.: Biomass
and nutrient stock of submersed and floating macrophytes in shallow lakes
formed by rewetting of degraded fens, Hydrobiologia, 692, 99–109,
https://doi.org/10.1007/s10750-011-0833-y, 2012.
Steinberg, L. M. and Regan, J. M.: mcrA-targeted real-time quantitative PCR
method to examine methanogen communities, Appl. Environ. Microb., 75, 4435–4442, https://doi.org/10.1128/AEM.02858-08, 2009.
Sun, C. L., Brauer, S. L., Cadillo-Quiroz, H., Zinder, S. H., and Yavitt, J.
B.: Seasonal changes in methanogenesis and methanogenic community in three
peatlands, New York State, Front. Microbiol., 3, 1–8,
https://doi.org/10.3389/fmicb.2012.00081, 2012.
Takai, K. and Horikoshi, K.: Rapid detection and quantification of members
of the archaeal community by quantitative PCR using fluorogenic probes,
Appl. Environ. Microb., 66, 5066–5072, 2000.
Tuittila, E.-S., Komulainen, V. M., Vasander, H., Nykänen, H.,
Martikainen, P. J., and Laine, J.: Methane dynamics of a restored cut-away
peatland, Global Change Biol., 6, 569–581,
https://doi.org/10.1046/j.1365-2486.2000.00341.x, 2000.
Urbanová, Z., Picek, T., and Bárta, J.: Effect of re-wetting on
carbon and nutrient fluxes, greenhouse gas production, and diversity of
methanogenic archaeal community, Ecol. Eng., 37, 1017–1026,
https://doi.org/10.1016/j.ecoleng.2010.07.012, 2011.
Urbanová, Z., Bárta, J., and Picek, T.: Methane emissions and
methanogenic archaea on pristine, drained and restored mountain peatlands,
central Europe, Ecosystems, 16, 664–677, https://doi.org/10.1007/s10021-013-9637-4,
2013.
van Bodegom, P., Stams, F., Mollema, L., Boeke, S., and Leffelaar, P.: Methane oxidation
and the competition for oxygen in the rice rhizosphere, Appl. Environ. Microb., 67, 3586–3597, https://doi.org/10.1128/AEM.67.8.3586-3597.2001, 2001.
Vanselow-Algan, M., Schmidt, S. R., Greven, M., Fiencke, C., Kutzbach, L., and
Pfeiffer, E.-M.: High methane emissions dominated annual greenhouse gas
balances 30 years after bog rewetting, Biogeosciences, 12, 4361–4371, https://doi.org/10.5194/bg-12-4361-2015, 2015.
Voigtländer, U., Schmidt, J., and Scheller, W.: Pflege-und
Entwicklungsplan NSG Heiligensee und Hütelmoor, 1996.
Wagner, D.: Effect of varying soil water potentials on methanogenesis in
aerated marshland soils, Sci. Rep.-UK, 7, 14706,
https://doi.org/10.1038/s41598-017-14980-y, 2017.
Weisner, E. and Schernewski, G.: Adaptation to climate change: a combined
coastal protection and re-alignment scheme in a Baltic tourism region,
J. Coast. Res., 65, 1963–1968,
https://doi.org/10.2112/SI65-332.1, 2013.
Wen, X., Yang, S., Horn, F., Winkel, M., Wagner, D., and Liebner, S.: Global biogeographic
analysis of methanogenic archaea identifies community-shaping factors of natural
environments, Frontiers in Microbiology, 8, 1–13, https://doi.org/10.3389/fmicb.2017.01339, 2017.
Wickham, H.: ggplot2: Elegant Graphics for Data Analysis, Springer, New York,
2009.
Wilhelm, E., Batino, R., and Wilcock, R. J.: Low-pressure solubility of
gases in liquid water, Chem. Rev., 77, 219–262,
https://doi.org/10.1021/cr60306a003, 1977.
Wilson, D., Blain, D., Couwenburg, J., Evans, C. D., Murdiyarso, D., Page,
S. E., Renou-Wilson, F., Rieley, J. O., Sirin, A., Strack, M., and Tuittila,
E.-S.: Greenhouse gas emission factors associated with rewetting of organic
soils, Mires Peat, 17, 1–28, https://doi.org/10.19189/MaP.2016.OMB.222, 2016.
Winkel, M., Mitzscherling, J., Overduin, P. P., Horn, F., Winterfeld, M., Rijkers, R.,
Grigoriev, M. N., Knoblauch, C., Mangelsdorf, K., Wagner, D., and Liebner, S.: Anaerobic
methanotrophic communities thrive in deep submarine permafrost, Sci. Rep.-UK, 8, 1–13, https://doi.org/10.1038/s41598-018-19505-9, 2018.
Yrjälä, K., Tuomivirta, T. T., Juottonen, H., Putkinen, A., Lappi,
K., Tuittila, E.-S., Penttila, T., Minkkinen, K., Laines, J., Peltoniemi,
K., and Fritze, H.: CH4 production and oxidation processes in a boreal
fen ecosystem after long-term water table drawdown, Global Change Biol.,
17, 1311–1320, https://doi.org/10.1111/j.1365-2486.2010.02290.x, 2011.
Zak, D. and Gelbrecht, J.: The mobilisation of phosphorus, organic carbon,
and ammonium in the initial stage of fen rewetting (a case study from NE
Germany), Biogeochemistry, 85, 141–151, https://doi.org/10.1007/s10533-007-9122-2, 2007.
Zak, D., Reuter, H., Augustin, J., Shatwell, T., Barth, M., Gelbrecht, J.,
and McInnes, R. J.: Changes of the CO2 and CH4
production potential of rewetted fens in the perspective of
temporal vegetation shifts, Biogeosciences, 12, 2455–2468, https://doi.org/10.5194/bg-12-2455-2015, 2015.
Zhang, J., Kobert, K., Flouri, T., and Stamatakis, A.: PEAR: a fast and
accurate Illumina Paired-End reAd merger, Bioinformatics, 30, 614–620,
https://doi.org/10.1093/bioinformatics/btt593, 2014.
Zhou, X., Zhang, Z., Tian, L., Li, X., and Tian, C.: Microbial communities
in peatlands along a chronosequence on the Sanjiang Plain, China, Nature
Scientific Reports, 7, 1–11, https://doi.org/10.1038/s41598-017-10436-5, 2017.
Short summary
Rewetting drained peatlands may lead to prolonged emission of the greenhouse gas methane, but the underlying factors are not well described. In this study, we found two rewetted fens with known high methane fluxes had a high ratio of microbial methane producers to methane consumers and a low abundance of methane consumers compared to pristine wetlands. We therefore suggest abundances of methane-cycling microbes as potential indicators for prolonged high methane emissions in rewetted peatlands.
Rewetting drained peatlands may lead to prolonged emission of the greenhouse gas methane, but...
Altmetrics
Final-revised paper
Preprint