Articles | Volume 13, issue 14
Biogeosciences, 13, 4219–4235, 2016
https://doi.org/10.5194/bg-13-4219-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue: Changing Permafrost in the Arctic and its Global Effects in...
Biogeosciences, 13, 4219–4235, 2016
https://doi.org/10.5194/bg-13-4219-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article 26 Jul 2016
Research article | 26 Jul 2016
Long-term drainage reduces CO2 uptake and increases CO2 emission on a Siberian floodplain due to shifts in vegetation community and soil thermal characteristics
Min Jung Kwon et al.
Related authors
Karel Castro-Morales, Thomas Kleinen, Sonja Kaiser, Sönke Zaehle, Fanny Kittler, Min Jung Kwon, Christian Beer, and Mathias Göckede
Biogeosciences, 15, 2691–2722, https://doi.org/10.5194/bg-15-2691-2018, https://doi.org/10.5194/bg-15-2691-2018, 2018
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We present year-round methane emissions from wetlands in Northeast Siberia that were simulated with a land surface model. Ground-based flux measurements from the same area were used for evaluation of the model results, finding a best agreement with the observations in the summertime emissions that take place in this region predominantly through plants. During winter, methane emissions through the snow contribute 4 % of the total annual methane budget, but these are still underestimated.
Mathias Göckede, Fanny Kittler, Min Jung Kwon, Ina Burjack, Martin Heimann, Olaf Kolle, Nikita Zimov, and Sergey Zimov
The Cryosphere, 11, 2975–2996, https://doi.org/10.5194/tc-11-2975-2017, https://doi.org/10.5194/tc-11-2975-2017, 2017
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Shifts in hydrologic conditions will be a key factor for the sustainability of Arctic ecosystems under future climate change. Using a long-term manipulation experiment, we analyzed how energy exchange processes within a permafrost ecosystem react to sustained dry conditions. Changes in several important ecosystem characteristics lead to reduced evapotranspiration and increased sensible heat fluxes. Heat transfer into the soil was strongly reduced, keeping the permafrost colder.
Torben Windirsch, Guido Grosse, Mathias Ulrich, Bruce C. Forbes, Mathias Göckede, Juliane Wolter, Marc Macias-Fauria, Johan Olofsson, Nikita Zimov, and Jens Strauss
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-227, https://doi.org/10.5194/bg-2021-227, 2021
Preprint under review for BG
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With global warming, permafrost thaw and associated carbon release are of increasing importance. We examined how large herbivorous animals affect Arctic landscapes and how they might contribute to reduction of these emissions. We show that over a short timespan of roughly 25 years, these animals have already changed the vegetation and landscape. On pastures in a permafrost area in Siberia we found smaller thaw depth and higher carbon content than in surrounding non-pasture areas.
Matthias Fuchs, Juri Palmtag, Bennet Juhls, Pier Paul Overduin, Guido Grosse, Ahmed Abdelwahab, Michael Bedington, Tina Sanders, Olga Ogneva, Irina V. Fedorova, Nikita S. Zimov, Paul J. Mann, and Jens Strauss
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2021-256, https://doi.org/10.5194/essd-2021-256, 2021
Preprint under review for ESSD
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We created digital, high-resolution bathymetry data sets for the Lena Delta and Kolyma Gulf regions in northeast Siberia. Based on nautical charts, we digitized depth points and isobaths lines, which serve as an input for a 50 m bathymetry model. The benefit of this data set is the accurate mapping of near-shore areas as well as the offshore continuation of the main deep river channels. This will improve the estimation of river outflow and the nutrient flux output into the coastal zone.
Kyle B. Delwiche, Sara Helen Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Jiquan Chen, Weinan Chen, Housen Chu, Higo J. Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hörtnagl, Hiroki Iwata, Adrien Jacotot, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken W. Krauss, Derrick Y. F. Lai, Annalea Lohila, Ivan Mammarella, Luca Belelli Marchesini, Giovanni Manca, Jaclyn Hatala Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin R. K. Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina V. R. Schäfer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E. Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L. Vourlitis, Eric J. Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, and Robert B. Jackson
Earth Syst. Sci. Data, 13, 3607–3689, https://doi.org/10.5194/essd-13-3607-2021, https://doi.org/10.5194/essd-13-3607-2021, 2021
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Methane is an important greenhouse gas, yet we lack knowledge about its global emissions and drivers. We present FLUXNET-CH4, a new global collection of methane measurements and a critical resource for the research community. We use FLUXNET-CH4 data to quantify the seasonality of methane emissions from freshwater wetlands, finding that methane seasonality varies strongly with latitude. Our new database and analysis will improve wetland model accuracy and inform greenhouse gas budgets.
Anna-Maria Virkkala, Susan M. Natali, Brendan M. Rogers, Jennifer D. Watts, Kathleen Savage, Sara June Connon, Marguerite Mauritz, Edward A. G. Schuur, Darcy Peter, Christina Minions, Julia Nojeim, Roisin Commane, Craig A. Emmerton, Mathias Goeckede, Manuel Helbig, David Holl, Hiroki Iwata, Hideki Kobayashi, Pasi Kolari, Efrén López-Blanco, Maija E. Marushchak, Mikhail Mastepanov, Lutz Merbold, Frans-Jan W. Parmentier, Matthias Peichl, Torsten Sachs, Oliver Sonnentag, Masahito Ueyama, Carolina Voigt, Mika Aurela, Julia Boike, Gerardo Celis, Namyi Chae, Torben R. Christensen, M. Syndonia Bret-Harte, Sigrid Dengel, Han Dolman, Colin W. Edgar, Bo Elberling, Eugenie Euskirchen, Achim Grelle, Juha Hatakka, Elyn Humphreys, Järvi Järveoja, Ayumi Kotani, Lars Kutzbach, Tuomas Laurila, Annalea Lohila, Ivan Mammarella, Yojiro Matsuura, Gesa Meyer, Mats B. Nilsson, Steven F. Oberbauer, Sang-Jong Park, Roman Petrov, Anatoly S. Prokushkin, Christopher Schulze, Vincent L. St.Louis, Eeva-Stiina Tuittila, Juha-Pekka Tuovinen, William Quinton, Andrej Varlagin, Donatella Zona, and Viacheslav I. Zyryanov
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2021-233, https://doi.org/10.5194/essd-2021-233, 2021
Preprint under review for ESSD
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The effects of climate warming on carbon cycling across the Arctic-Boreal Zone (ABZ) remains poorly understood due to the relatively limited distribution of ABZ flux sites. Fortunately, this flux network is constantly increasing, but new measurements are published in various platforms, making it challenging to understand the ABZ carbon cycle as a whole. Here, we compiled a new database of Arctic-Boreal CO2 fluxes to help facilitate large-scale assessments of the ABZ carbon cycle.
Martijn Pallandt, Jitendra Kumar, Marguerite Mauritz, Edward Schuur, Anna-Maria Virkkala, Gerardo Celis, Forrest Hoffman, and Mathias Göckede
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-133, https://doi.org/10.5194/bg-2021-133, 2021
Preprint under review for BG
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Thawing of Arctic permafrost soils could trigger the release of vast amounts of carbon to the atmosphere, thus enhance climate change. Our study investigated how well the current network of eddy-covariance sites, a technique to monitor greenhouse gas exchange at local scales, captures pan-Arctic flux patterns. We identified large coverage gaps, e.g. in Siberia, but also demonstrated that a targeted addition of relatively few sites can significantly improve network performance.
Wolfgang Fischer, Christoph Thomas, Nikita Zimov, and Mathias Göckede
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-110, https://doi.org/10.5194/bg-2021-110, 2021
Preprint under review for BG
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Arctic permafrost ecosystems may release large amounts of carbon under warmer future climates, and may therefore accelerate global climate change. Our study investigated how long-term grazing by large animals influenced ecosystem characteristics and carbon budgets at a Siberian permafrost site. Our results demonstrate that such management can contribute to stabilize ecosystems to keep carbon in the ground, particularly through drying soils and reducing methane emissions.
Hanna Lappalainen, Tuukka Petäjä, Timo Vihma, Jouni Räisänen, Alexander Baklanov, Sergey Chalov, Igor Esau, Ekaterina Ezhova, Matti Leppäranta, Dmitry Pozdnyakov, Jukka Pumpanen, Meinrat O. Andreae, Michael Arshinov, Eija Asmi, Jianhui Bai, Igor Bashmachnikov, Boris Belan, Federico Bianchi, Boris Biskaborn, Michael Boy, Jaana Bäck, Bin Cheng, Natalia Ye Chubarova, Jonathan Duplissy, Egor Dyukarev, Konstantinos Eleftheriadis, Martin Forsius, Martin Heimann, Sirkku Juhola, Vladimir Konovalov, Igor Konovalov, Pavel Konstantinov, Kajar Koster, Elena Lapsina, Anna Lintunen, Alexander Mahura, Risto Makkonen, Svetlana Malkhazova, Ivan Mammarella, Stefano Mammola, Stephany Mazon, Outi Meinander, Eugene Mikhailov, Victoria Miles, Stanislav Myslenko, Dimitry Orlov, Jean-Daniel Paris, Robertta Pirazzini, Olga Popovicheva, Jouni Pulliainen, Kimmo Rautiainen, Torsten Sachs, Vladimir Shevchenko, Andrey Skorokhod, Andreas Stohl, Elli Suhonen, Erik S. Thomson, Marina Tsidilina, Veli-Pekka Tynkkynen, Petteri Uotila, Aki Virkkula, Nadezhda Voropay, Tobias Wolf, Sayaka Yasunaka, Jiahua Zhang, Yubao Qui, Aijun Ding, Huadong Guo, Valery Bondur, Nikolay Kasimov, Sergey Zilitinkevich, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2021-341, https://doi.org/10.5194/acp-2021-341, 2021
Revised manuscript under review for ACP
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We summarize results during the last five years in the Northern Eurasian region, especially from Russia, and introduce recent observations on the air quality in the urban environments in China. Although the scientific knowledge in these regions has increased, there are still gaps in our understanding of large-scale climate-Earth surface interactions and feedbacks. This arises from limitations in research infrastructures and integrative data analyses, hindering a comprehensive system analysis.
Carlos A. Sierra, Susan E. Crow, Martin Heimann, Holger Metzler, and Ernst-Detlef Schulze
Biogeosciences, 18, 1029–1048, https://doi.org/10.5194/bg-18-1029-2021, https://doi.org/10.5194/bg-18-1029-2021, 2021
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The climate benefit of carbon sequestration (CBS) is a metric developed to quantify avoided warming by two separate processes: the amount of carbon drawdown from the atmosphere and the time this carbon is stored in a reservoir. This metric can be useful for quantifying the role of forests and soils for climate change mitigation and to better quantify the benefits of carbon removals by sinks.
Javier Pacheco-Labrador, Tarek S. El-Madany, M. Pilar Martin, Rosario Gonzalez-Cascon, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Tiana Hammer, Heiko Moossen, Kathrin Henkel, Olaf Kolle, David Martini, Vicente Burchard, Christiaan van der Tol, Karl Segl, Markus Reichstein, and Mirco Migliavacca
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-501, https://doi.org/10.5194/bg-2019-501, 2020
Revised manuscript not accepted
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The new generation of sensors on-board satellites have the potential to provide richer information about the function of vegetation than before. This information, nowadays missing, is fundamental to improve our understanding and prediction of carbon and water cycles, and therefore to anticipate effects and responses to Climate Change. In this manuscript we propose a method to exploit the data provided by these satellites to successfully obtain this information key to face Climate Change.
Friedemann Reum, Mathias Göckede, Jost V. Lavric, Olaf Kolle, Sergey Zimov, Nikita Zimov, Martijn Pallandt, and Martin Heimann
Atmos. Meas. Tech., 12, 5717–5740, https://doi.org/10.5194/amt-12-5717-2019, https://doi.org/10.5194/amt-12-5717-2019, 2019
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We present continuous in situ measurements of atmospheric CO2 and CH4 mole fractions at the new station Ambarchik, located in northeastern Siberia. We describe the site, measurements and quality control, characterize the signals in comparison with data from Barrow, Alaska, and show which regions the measurements are sensitive to. Ambarchik data are available upon request.
Eric J. Morgan, Jost V. Lavric, Damian L. Arévalo-Martínez, Hermann W. Bange, Tobias Steinhoff, Thomas Seifert, and Martin Heimann
Biogeosciences, 16, 4065–4084, https://doi.org/10.5194/bg-16-4065-2019, https://doi.org/10.5194/bg-16-4065-2019, 2019
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Taking a 2-year atmospheric record of atmospheric oxygen and the greenhouse gases N2O, CO2, and CH4, made at a coastal site in the Namib Desert, we estimated the fluxes of these gases from upwelling events in the northern Benguela Current region. We compared these results with flux measurements made on a research vessel in the study area at the same time and found that the two approaches agreed well. The study region was a source of N2O, CO2, and CH4 to the atmosphere during upwelling events.
Jarmo Mäkelä, Jürgen Knauer, Mika Aurela, Andrew Black, Martin Heimann, Hideki Kobayashi, Annalea Lohila, Ivan Mammarella, Hank Margolis, Tiina Markkanen, Jouni Susiluoto, Tea Thum, Toni Viskari, Sönke Zaehle, and Tuula Aalto
Geosci. Model Dev., 12, 4075–4098, https://doi.org/10.5194/gmd-12-4075-2019, https://doi.org/10.5194/gmd-12-4075-2019, 2019
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We assess the differences of six stomatal conductance formulations, embedded into a land–vegetation model JSBACH, on 10 boreal coniferous evergreen forest sites. We calibrate the model parameters using all six functions in a multi-year experiment, as well as for a separate drought event at one of the sites, using the adaptive population importance sampler. The analysis reveals weaknesses in the stomatal conductance formulation-dependent model behaviour that we are able to partially amend.
Olli Peltola, Timo Vesala, Yao Gao, Olle Räty, Pavel Alekseychik, Mika Aurela, Bogdan Chojnicki, Ankur R. Desai, Albertus J. Dolman, Eugenie S. Euskirchen, Thomas Friborg, Mathias Göckede, Manuel Helbig, Elyn Humphreys, Robert B. Jackson, Georg Jocher, Fortunat Joos, Janina Klatt, Sara H. Knox, Natalia Kowalska, Lars Kutzbach, Sebastian Lienert, Annalea Lohila, Ivan Mammarella, Daniel F. Nadeau, Mats B. Nilsson, Walter C. Oechel, Matthias Peichl, Thomas Pypker, William Quinton, Janne Rinne, Torsten Sachs, Mateusz Samson, Hans Peter Schmid, Oliver Sonnentag, Christian Wille, Donatella Zona, and Tuula Aalto
Earth Syst. Sci. Data, 11, 1263–1289, https://doi.org/10.5194/essd-11-1263-2019, https://doi.org/10.5194/essd-11-1263-2019, 2019
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Here we develop a monthly gridded dataset of northern (> 45 N) wetland methane (CH4) emissions. The data product is derived using a random forest machine-learning technique and eddy covariance CH4 fluxes from 25 wetland sites. Annual CH4 emissions from these wetlands calculated from the derived data product are comparable to prior studies focusing on these areas. This product is an independent estimate of northern wetland CH4 emissions and hence could be used, e.g. for process model evaluation.
Mathias Göckede, Fanny Kittler, and Carsten Schaller
Biogeosciences, 16, 3113–3131, https://doi.org/10.5194/bg-16-3113-2019, https://doi.org/10.5194/bg-16-3113-2019, 2019
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Methane is one of the most important greenhouse gases. Methane emissions from land sources to the atmosphere often occur in the form of short but intense outbursts, which are difficult to measure. We developed a new software tool based on wavelets which reliably quantifies such methane outbursts. Using these results as a reference, our study shows that regular data processing using the eddy-covariance technique provides solid long-term methane budgets, but short-term uncertainties can be high.
Karel Castro-Morales, Gregor Schürmann, Christoph Köstler, Christian Rödenbeck, Martin Heimann, and Sönke Zaehle
Biogeosciences, 16, 3009–3032, https://doi.org/10.5194/bg-16-3009-2019, https://doi.org/10.5194/bg-16-3009-2019, 2019
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To obtain nearly 30 years of global terrestrial carbon fluxes, we simultaneously incorporated in a land surface model three different time periods of two observational data sets: absorbed photosynthetic active radiation and atmospheric CO2 concentrations. One decade of data is enough to improve the modeled long-term trends and seasonal amplitudes of the assimilated variables, particularly in boreal regions. This model has the potential to provide short-term predictions of land carbon fluxes.
Norman Rößger, Christian Wille, David Holl, Mathias Göckede, and Lars Kutzbach
Biogeosciences, 16, 2591–2615, https://doi.org/10.5194/bg-16-2591-2019, https://doi.org/10.5194/bg-16-2591-2019, 2019
Carsten Schaller, Fanny Kittler, Thomas Foken, and Mathias Göckede
Atmos. Chem. Phys., 19, 4041–4059, https://doi.org/10.5194/acp-19-4041-2019, https://doi.org/10.5194/acp-19-4041-2019, 2019
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Methane emissions from biogenic sources, e.g. Arctic permafrost ecosystems, are associated with uncertainties due to the high variability of fluxes in both space and time. Besides the traditional eddy covariance method, we evaluated a method based on wavelet analysis, which does not require a stationary time series, to calculate fluxes. The occurrence of extreme methane flux events was strongly correlated with the soil temperature. They were triggered by atmospheric non-turbulent mixing.
Friedemann Reum, Christoph Gerbig, Jost V. Lavric, Chris W. Rella, and Mathias Göckede
Atmos. Meas. Tech., 12, 1013–1027, https://doi.org/10.5194/amt-12-1013-2019, https://doi.org/10.5194/amt-12-1013-2019, 2019
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Atmospheric CO2 and CH4 mole fractions are often measured using greenhouse gas analyzers manufactured by Picarro, Inc. We report biases in these measurements that are related to pressure changes in the optical cavity of the analyzers and occur mainly at low water vapor mole fractions. We provide a method to correct the biases, which contributes to keeping the overall accuracy of CO2 and CH4 measurements with Picarro analyzers within the WMO interlaboratory compatibility goals.
Ekaterina Ezhova, Ilona Ylivinkka, Joel Kuusk, Kaupo Komsaare, Marko Vana, Alisa Krasnova, Steffen Noe, Mikhail Arshinov, Boris Belan, Sung-Bin Park, Jošt Valentin Lavrič, Martin Heimann, Tuukka Petäjä, Timo Vesala, Ivan Mammarella, Pasi Kolari, Jaana Bäck, Üllar Rannik, Veli-Matti Kerminen, and Markku Kulmala
Atmos. Chem. Phys., 18, 17863–17881, https://doi.org/10.5194/acp-18-17863-2018, https://doi.org/10.5194/acp-18-17863-2018, 2018
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Understanding the connections between aerosols, solar radiation and photosynthesis in terrestrial ecosystems is important for estimates of the CO2 balance in the atmosphere. Atmospheric aerosols and clouds influence solar radiation. In this study, we quantify the aerosol effect on solar radiation in boreal forests and study forest ecosystems response to this change in the radiation conditions. The analysis is based on atmospheric observations from several remote stations in Eurasian forests.
Karel Castro-Morales, Thomas Kleinen, Sonja Kaiser, Sönke Zaehle, Fanny Kittler, Min Jung Kwon, Christian Beer, and Mathias Göckede
Biogeosciences, 15, 2691–2722, https://doi.org/10.5194/bg-15-2691-2018, https://doi.org/10.5194/bg-15-2691-2018, 2018
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We present year-round methane emissions from wetlands in Northeast Siberia that were simulated with a land surface model. Ground-based flux measurements from the same area were used for evaluation of the model results, finding a best agreement with the observations in the summertime emissions that take place in this region predominantly through plants. During winter, methane emissions through the snow contribute 4 % of the total annual methane budget, but these are still underestimated.
Christian Rödenbeck, Sönke Zaehle, Ralph Keeling, and Martin Heimann
Biogeosciences, 15, 2481–2498, https://doi.org/10.5194/bg-15-2481-2018, https://doi.org/10.5194/bg-15-2481-2018, 2018
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In this paper we investigate how the CO2 exchange between the land vegetation and the atmosphere varies from year to year. We quantify the relation between variations in the CO2 exchange and variations in air temperature. For this quantification, we use long-term measurements of CO2 in the air at many locations, a simulation code for the transport of carbon dioxide through the atmosphere, and a data set of air temperature. The results help us to understand the mechanisms of CO2 exchange.
Martin Kunz, Jost V. Lavric, Christoph Gerbig, Pieter Tans, Don Neff, Christine Hummelgård, Hans Martin, Henrik Rödjegård, Burkhard Wrenger, and Martin Heimann
Atmos. Meas. Tech., 11, 1833–1849, https://doi.org/10.5194/amt-11-1833-2018, https://doi.org/10.5194/amt-11-1833-2018, 2018
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Unmanned aircraft could provide a cost-effective way to close gaps in the observation of the carbon cycle, provided that small yet accurate analysers are available. We have developed a COmpact Carbon dioxide analyser for Airborne Platforms (COCAP). During validation of its CO2 measurements in simulated and real flights we found a measurement error of 1.2 μmol mol−1 or better with no indication of bias. COCAP is a self-contained package that has proven well suited for operation on board UASs.
Panagiotis Kountouris, Christoph Gerbig, Christian Rödenbeck, Ute Karstens, Thomas Frank Koch, and Martin Heimann
Atmos. Chem. Phys., 18, 3027–3045, https://doi.org/10.5194/acp-18-3027-2018, https://doi.org/10.5194/acp-18-3027-2018, 2018
Panagiotis Kountouris, Christoph Gerbig, Christian Rödenbeck, Ute Karstens, Thomas F. Koch, and Martin Heimann
Atmos. Chem. Phys., 18, 3047–3064, https://doi.org/10.5194/acp-18-3047-2018, https://doi.org/10.5194/acp-18-3047-2018, 2018
Mathias Göckede, Fanny Kittler, Min Jung Kwon, Ina Burjack, Martin Heimann, Olaf Kolle, Nikita Zimov, and Sergey Zimov
The Cryosphere, 11, 2975–2996, https://doi.org/10.5194/tc-11-2975-2017, https://doi.org/10.5194/tc-11-2975-2017, 2017
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Shifts in hydrologic conditions will be a key factor for the sustainability of Arctic ecosystems under future climate change. Using a long-term manipulation experiment, we analyzed how energy exchange processes within a permafrost ecosystem react to sustained dry conditions. Changes in several important ecosystem characteristics lead to reduced evapotranspiration and increased sensible heat fluxes. Heat transfer into the soil was strongly reduced, keeping the permafrost colder.
Eugene F. Mikhailov, Svetlana Mironova, Gregory Mironov, Sergey Vlasenko, Alexey Panov, Xuguang Chi, David Walter, Samara Carbone, Paulo Artaxo, Martin Heimann, Jost Lavric, Ulrich Pöschl, and Meinrat O. Andreae
Atmos. Chem. Phys., 17, 14365–14392, https://doi.org/10.5194/acp-17-14365-2017, https://doi.org/10.5194/acp-17-14365-2017, 2017
Elizabeth E. Webb, Kathryn Heard, Susan M. Natali, Andrew G. Bunn, Heather D. Alexander, Logan T. Berner, Alexander Kholodov, Michael M. Loranty, John D. Schade, Valentin Spektor, and Nikita Zimov
Biogeosciences, 14, 4279–4294, https://doi.org/10.5194/bg-14-4279-2017, https://doi.org/10.5194/bg-14-4279-2017, 2017
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Permafrost soils store massive amounts of C, yet estimates of soil C storage in this region are highly uncertain, primarily due to undersampling at all spatial scales; circumpolar soil C estimates lack sufficient continental spatial diversity, regional intensity, and replication at the field-site level. We aim to reduce the uncertainty of regional C estimates by providing a comprehensive assessment of vegetation, active-layer, and permafrost C stocks in a watershed in northeast Siberia, Russia.
Thibaud Thonat, Marielle Saunois, Philippe Bousquet, Isabelle Pison, Zeli Tan, Qianlai Zhuang, Patrick M. Crill, Brett F. Thornton, David Bastviken, Ed J. Dlugokencky, Nikita Zimov, Tuomas Laurila, Juha Hatakka, Ove Hermansen, and Doug E. J. Worthy
Atmos. Chem. Phys., 17, 8371–8394, https://doi.org/10.5194/acp-17-8371-2017, https://doi.org/10.5194/acp-17-8371-2017, 2017
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Atmospheric methane simulations in the Arctic have been made for 2012 and compared to continuous observations at six measurement sites. All methane sources significantly affect the measurements at all stations, at least at the synoptic scale, except for biomass burning. An appropriate modelling framework combined with continuous observations of atmospheric methane enables us to gain knowledge on regional methane sources, including those which are usually poorly represented, such as freshwater.
Friedemann Reum, Christoph Gerbig, Jost V. Lavric, Chris W. Rella, and Mathias Göckede
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2017-174, https://doi.org/10.5194/amt-2017-174, 2017
Revised manuscript not accepted
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High-accuracy observations of atmospheric CO2 and CH4 levels, which are vital for quantifying sources and sinks of these gases, are often obtained using Picarro greenhouse gas analyzers. These require a correction for the effects of water vapor. We report biases in CO2 and CH4 levels obtained using the traditional water correction for Picarro analyzers related to pressure changes in the optical cavity and mainly affecting measurements at low water vapor mole fractions, and how to correct them.
Carsten Schaller, Mathias Göckede, and Thomas Foken
Atmos. Meas. Tech., 10, 869–880, https://doi.org/10.5194/amt-10-869-2017, https://doi.org/10.5194/amt-10-869-2017, 2017
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The eddy covariance (EC) method allows for measuring and calculating vertical turbulent exchange fluxes between ecosystems and the atmosphere. It fails in non-steady-state flow conditions, e.g. in Arctic regions. Two alternative calculation methods, conditional sampling and wavelet analysis, were implemented and compared to EC. Wavelet analysis for allows calculating a trustworthy flux even in non-stationary times and offers new possibilities for exact flux calculation in difficult environments.
Sonja Kaiser, Mathias Göckede, Karel Castro-Morales, Christian Knoblauch, Altug Ekici, Thomas Kleinen, Sebastian Zubrzycki, Torsten Sachs, Christian Wille, and Christian Beer
Geosci. Model Dev., 10, 333–358, https://doi.org/10.5194/gmd-10-333-2017, https://doi.org/10.5194/gmd-10-333-2017, 2017
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A new consistent, process-based methane module that is integrated with permafrost processes is presented. It was developed within a global land surface scheme and evaluated at a polygonal tundra site in Samoylov, Russia. The calculated methane emissions show fair agreement with field data and capture detailed differences between the explicitly modelled gas transport processes and in the gas dynamics under varying soil water and temperature conditions during seasons and on different microsites.
Sander Houweling, Peter Bergamaschi, Frederic Chevallier, Martin Heimann, Thomas Kaminski, Maarten Krol, Anna M. Michalak, and Prabir Patra
Atmos. Chem. Phys., 17, 235–256, https://doi.org/10.5194/acp-17-235-2017, https://doi.org/10.5194/acp-17-235-2017, 2017
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The aim of this paper is to present an overview of inverse modeling methods, developed over the years, for estimating the global sources and sinks of the greenhouse gas methane from atmospheric measurements. It provides insight into how techniques and estimates have evolved over time, what the remaining shortcomings are, new developments, and promising future directions.
Hanna K. Lappalainen, Veli-Matti Kerminen, Tuukka Petäjä, Theo Kurten, Aleksander Baklanov, Anatoly Shvidenko, Jaana Bäck, Timo Vihma, Pavel Alekseychik, Meinrat O. Andreae, Stephen R. Arnold, Mikhail Arshinov, Eija Asmi, Boris Belan, Leonid Bobylev, Sergey Chalov, Yafang Cheng, Natalia Chubarova, Gerrit de Leeuw, Aijun Ding, Sergey Dobrolyubov, Sergei Dubtsov, Egor Dyukarev, Nikolai Elansky, Kostas Eleftheriadis, Igor Esau, Nikolay Filatov, Mikhail Flint, Congbin Fu, Olga Glezer, Aleksander Gliko, Martin Heimann, Albert A. M. Holtslag, Urmas Hõrrak, Juha Janhunen, Sirkku Juhola, Leena Järvi, Heikki Järvinen, Anna Kanukhina, Pavel Konstantinov, Vladimir Kotlyakov, Antti-Jussi Kieloaho, Alexander S. Komarov, Joni Kujansuu, Ilmo Kukkonen, Ella-Maria Duplissy, Ari Laaksonen, Tuomas Laurila, Heikki Lihavainen, Alexander Lisitzin, Alexsander Mahura, Alexander Makshtas, Evgeny Mareev, Stephany Mazon, Dmitry Matishov, Vladimir Melnikov, Eugene Mikhailov, Dmitri Moisseev, Robert Nigmatulin, Steffen M. Noe, Anne Ojala, Mari Pihlatie, Olga Popovicheva, Jukka Pumpanen, Tatjana Regerand, Irina Repina, Aleksei Shcherbinin, Vladimir Shevchenko, Mikko Sipilä, Andrey Skorokhod, Dominick V. Spracklen, Hang Su, Dmitry A. Subetto, Junying Sun, Arkady Y. Terzhevik, Yuri Timofeyev, Yuliya Troitskaya, Veli-Pekka Tynkkynen, Viacheslav I. Kharuk, Nina Zaytseva, Jiahua Zhang, Yrjö Viisanen, Timo Vesala, Pertti Hari, Hans Christen Hansson, Gennady G. Matvienko, Nikolai S. Kasimov, Huadong Guo, Valery Bondur, Sergej Zilitinkevich, and Markku Kulmala
Atmos. Chem. Phys., 16, 14421–14461, https://doi.org/10.5194/acp-16-14421-2016, https://doi.org/10.5194/acp-16-14421-2016, 2016
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After kick off in 2012, the Pan-Eurasian Experiment (PEEX) program has expanded fast and today the multi-disciplinary research community covers ca. 80 institutes and a network of ca. 500 scientists from Europe, Russia, and China. Here we introduce scientific topics relevant in this context. This is one of the first multi-disciplinary overviews crossing scientific boundaries, from atmospheric sciences to socio-economics and social sciences.
Christoph Zellweger, Lukas Emmenegger, Mohd Firdaus, Juha Hatakka, Martin Heimann, Elena Kozlova, T. Gerard Spain, Martin Steinbacher, Marcel V. van der Schoot, and Brigitte Buchmann
Atmos. Meas. Tech., 9, 4737–4757, https://doi.org/10.5194/amt-9-4737-2016, https://doi.org/10.5194/amt-9-4737-2016, 2016
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We compared instruments using more traditional techniques for measuring CO2 and CH4 at different stations of the Global Atmosphere Watch (GAW) programme with a travelling instrument using a spectroscopic technique. Our results show that the newer analytical techniques have clear advantages over the traditional methods which will lead to the improved accuracy of atmospheric CO2 and CH4 measurement. The work was carried out in the framework of the GAW quality assurance/quality control system.
Fanny Kittler, Ina Burjack, Chiara A. R. Corradi, Martin Heimann, Olaf Kolle, Lutz Merbold, Nikita Zimov, Sergey Zimov, and Mathias Göckede
Biogeosciences, 13, 5315–5332, https://doi.org/10.5194/bg-13-5315-2016, https://doi.org/10.5194/bg-13-5315-2016, 2016
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We compared growing season CO2 fluxes of a wet tussock tundra ecosystem from an area affected by decadal drainage and an undisturbed area on the Kolyma floodplain in northeastern Siberia. The results show systematically reduced CO2 uptake within the drained area, caused by increased respiration, and that the local permafrost ecosystem is capable of adapting to significantly different hydrologic conditions without losing its capacity to act as a net sink for CO2.
Gregor J. Schürmann, Thomas Kaminski, Christoph Köstler, Nuno Carvalhais, Michael Voßbeck, Jens Kattge, Ralf Giering, Christian Rödenbeck, Martin Heimann, and Sönke Zaehle
Geosci. Model Dev., 9, 2999–3026, https://doi.org/10.5194/gmd-9-2999-2016, https://doi.org/10.5194/gmd-9-2999-2016, 2016
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We describe the Max Planck Institute Carbon Cycle Data Assimilation System (MPI-CCDAS). The system improves the modelled carbon cycle of the terrestrial biosphere by systematically confronting (or assimilating) the model with observations of atmospheric CO2 and fractions of absorbed photosynthetically active radiation. Jointly assimilating both data streams outperforms the single-data stream experiments, thus showing the value of a multi-data stream assimilation.
Anna Karion, Colm Sweeney, John B. Miller, Arlyn E. Andrews, Roisin Commane, Steven Dinardo, John M. Henderson, Jacob Lindaas, John C. Lin, Kristina A. Luus, Tim Newberger, Pieter Tans, Steven C. Wofsy, Sonja Wolter, and Charles E. Miller
Atmos. Chem. Phys., 16, 5383–5398, https://doi.org/10.5194/acp-16-5383-2016, https://doi.org/10.5194/acp-16-5383-2016, 2016
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Northern high-latitude carbon sources and sinks, including those resulting from degrading permafrost, are thought to be sensitive to the rapidly warming climate. Here we use carbon dioxide and methane measurements from a tower near Fairbanks AK to investigate regional Alaskan fluxes of CO2 and CH4 for 2012–2014.
S. Sippel, F. E. L. Otto, M. Forkel, M. R. Allen, B. P. Guillod, M. Heimann, M. Reichstein, S. I. Seneviratne, K. Thonicke, and M. D. Mahecha
Earth Syst. Dynam., 7, 71–88, https://doi.org/10.5194/esd-7-71-2016, https://doi.org/10.5194/esd-7-71-2016, 2016
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We introduce a novel technique to bias correct climate model output for impact simulations that preserves its physical consistency and multivariate structure. The methodology considerably improves the representation of extremes in climatic variables relative to conventional bias correction strategies. Illustrative simulations of biosphere–atmosphere carbon and water fluxes with a biosphere model (LPJmL) show that the novel technique can be usefully applied to drive climate impact models.
O. Perez-Priego, J. Guan, M. Rossini, F. Fava, T. Wutzler, G. Moreno, N. Carvalhais, A. Carrara, O. Kolle, T. Julitta, M. Schrumpf, M. Reichstein, and M. Migliavacca
Biogeosciences, 12, 6351–6367, https://doi.org/10.5194/bg-12-6351-2015, https://doi.org/10.5194/bg-12-6351-2015, 2015
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Sun-induced chlorophyll fluorescence and photochemical reflectance index revealed controls of climate and nutrient availability on photosynthesis (gross primary production, GPP). Meteo-driven models (MMs) were unable to describe nutrient-induced effects on GPP. Important implications can be derived from these results, and uncertainties in the prediction of global GPP still remain when MMs do not account for plant nutrient availability.
L. Wingate, J. Ogée, E. Cremonese, G. Filippa, T. Mizunuma, M. Migliavacca, C. Moisy, M. Wilkinson, C. Moureaux, G. Wohlfahrt, A. Hammerle, L. Hörtnagl, C. Gimeno, A. Porcar-Castell, M. Galvagno, T. Nakaji, J. Morison, O. Kolle, A. Knohl, W. Kutsch, P. Kolari, E. Nikinmaa, A. Ibrom, B. Gielen, W. Eugster, M. Balzarolo, D. Papale, K. Klumpp, B. Köstner, T. Grünwald, R. Joffre, J.-M. Ourcival, M. Hellstrom, A. Lindroth, C. George, B. Longdoz, B. Genty, J. Levula, B. Heinesch, M. Sprintsin, D. Yakir, T. Manise, D. Guyon, H. Ahrends, A. Plaza-Aguilar, J. H. Guan, and J. Grace
Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, https://doi.org/10.5194/bg-12-5995-2015, 2015
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The timing of plant development stages and their response to climate and management were investigated using a network of digital cameras installed across different European ecosystems. Using the relative red, green and blue content of images we showed that the green signal could be used to estimate the length of the growing season in broadleaf forests. We also developed a model that predicted the seasonal variations of camera RGB signals and how they relate to leaf pigment content and area well.
M. O. Andreae, O. C. Acevedo, A. Araùjo, P. Artaxo, C. G. G. Barbosa, H. M. J. Barbosa, J. Brito, S. Carbone, X. Chi, B. B. L. Cintra, N. F. da Silva, N. L. Dias, C. Q. Dias-Júnior, F. Ditas, R. Ditz, A. F. L. Godoi, R. H. M. Godoi, M. Heimann, T. Hoffmann, J. Kesselmeier, T. Könemann, M. L. Krüger, J. V. Lavric, A. O. Manzi, A. P. Lopes, D. L. Martins, E. F. Mikhailov, D. Moran-Zuloaga, B. W. Nelson, A. C. Nölscher, D. Santos Nogueira, M. T. F. Piedade, C. Pöhlker, U. Pöschl, C. A. Quesada, L. V. Rizzo, C.-U. Ro, N. Ruckteschler, L. D. A. Sá, M. de Oliveira Sá, C. B. Sales, R. M. N. dos Santos, J. Saturno, J. Schöngart, M. Sörgel, C. M. de Souza, R. A. F. de Souza, H. Su, N. Targhetta, J. Tóta, I. Trebs, S. Trumbore, A. van Eijck, D. Walter, Z. Wang, B. Weber, J. Williams, J. Winderlich, F. Wittmann, S. Wolff, and A. M. Yáñez-Serrano
Atmos. Chem. Phys., 15, 10723–10776, https://doi.org/10.5194/acp-15-10723-2015, https://doi.org/10.5194/acp-15-10723-2015, 2015
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This paper describes the Amazon Tall Tower Observatory (ATTO), a new atmosphere-biosphere observatory located in the remote Amazon Basin. It presents results from ecosystem ecology, meteorology, trace gas, and aerosol measurements collected at the ATTO site during the first 3 years of operation.
K. A. Luus and J. C. Lin
Geosci. Model Dev., 8, 2655–2674, https://doi.org/10.5194/gmd-8-2655-2015, https://doi.org/10.5194/gmd-8-2655-2015, 2015
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PolarVPRM uses a diagnostic, remote-sensing-based approach optimized for polar regions to estimate net ecosystem CO2 exchange (NEE) between the high-latitude land surface and the atmosphere. PolarVPRM NEE shows close agreement with NEE observed from eddy covariance sites, relative to other models. Examination of per-pixel trends in PolarVPRM NEE and its drivers (North America north of 55 N, 2001-2012) indicate arctic greening and boreal browning in response to changing environmental conditions.
V. Proschek, G. Kirchengast, S. Schweitzer, J. S. A. Brooke, P. F. Bernath, C. B. Thomas, J.-G. Wang, K. A. Tereszchuk, G. González Abad, R. J. Hargreaves, C. A. Beale, J. J. Harrison, P. A. Martin, V. L. Kasyutich, C. Gerbig, O. Kolle, and A. Loescher
Atmos. Meas. Tech., 8, 3315–3336, https://doi.org/10.5194/amt-8-3315-2015, https://doi.org/10.5194/amt-8-3315-2015, 2015
E. J. Morgan, J. V. Lavrič, T. Seifert, T. Chicoine, A. Day, J. Gomez, R. Logan, J. Sack, T. Shuuya, E. G. Uushona, K. Vincent, U. Schultz, E.-G. Brunke, C. Labuschagne, R. L. Thompson, S. Schmidt, A. C. Manning, and M. Heimann
Atmos. Meas. Tech., 8, 2233–2250, https://doi.org/10.5194/amt-8-2233-2015, https://doi.org/10.5194/amt-8-2233-2015, 2015
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We describe the analytical techniques used in the creation of a new background site for continuous measurements of greenhouse gases, carbon monoxide, and atmospheric oxygen in the Namib Desert. The measurement system is semi-automated and optimized for operation in a remote locale. Measurement uncertainties, gas handling, calibration schemes, drift corrections, and instrument performance are discussed.
A. Piayda, M. Dubbert, C. Rebmann, O. Kolle, F. Costa e Silva, A. Correia, J. S. Pereira, C. Werner, and M. Cuntz
Biogeosciences, 11, 7159–7178, https://doi.org/10.5194/bg-11-7159-2014, https://doi.org/10.5194/bg-11-7159-2014, 2014
C. Rödenbeck, D. C. E. Bakker, N. Metzl, A. Olsen, C. Sabine, N. Cassar, F. Reum, R. F. Keeling, and M. Heimann
Biogeosciences, 11, 4599–4613, https://doi.org/10.5194/bg-11-4599-2014, https://doi.org/10.5194/bg-11-4599-2014, 2014
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
J. Winderlich, C. Gerbig, O. Kolle, and M. Heimann
Biogeosciences, 11, 2055–2068, https://doi.org/10.5194/bg-11-2055-2014, https://doi.org/10.5194/bg-11-2055-2014, 2014
M. Heimann
Earth Syst. Dynam., 5, 41–42, https://doi.org/10.5194/esd-5-41-2014, https://doi.org/10.5194/esd-5-41-2014, 2014
X. Chi, J. Winderlich, J.-C. Mayer, A. V. Panov, M. Heimann, W. Birmili, J. Heintzenberg, Y. Cheng, and M. O. Andreae
Atmos. Chem. Phys., 13, 12271–12298, https://doi.org/10.5194/acp-13-12271-2013, https://doi.org/10.5194/acp-13-12271-2013, 2013
K. A. Luus, Y. Gel, J. C. Lin, R. E. J. Kelly, and C. R. Duguay
Biogeosciences, 10, 7575–7597, https://doi.org/10.5194/bg-10-7575-2013, https://doi.org/10.5194/bg-10-7575-2013, 2013
T. J. Bohn, E. Podest, R. Schroeder, N. Pinto, K. C. McDonald, M. Glagolev, I. Filippov, S. Maksyutov, M. Heimann, X. Chen, and D. P. Lettenmaier
Biogeosciences, 10, 6559–6576, https://doi.org/10.5194/bg-10-6559-2013, https://doi.org/10.5194/bg-10-6559-2013, 2013
B. Badawy, C. Rödenbeck, M. Reichstein, N. Carvalhais, and M. Heimann
Biogeosciences, 10, 6485–6508, https://doi.org/10.5194/bg-10-6485-2013, https://doi.org/10.5194/bg-10-6485-2013, 2013
V. Beck, C. Gerbig, T. Koch, M. M. Bela, K. M. Longo, S. R. Freitas, J. O. Kaplan, C. Prigent, P. Bergamaschi, and M. Heimann
Atmos. Chem. Phys., 13, 7961–7982, https://doi.org/10.5194/acp-13-7961-2013, https://doi.org/10.5194/acp-13-7961-2013, 2013
C. Rödenbeck, R. F. Keeling, D. C. E. Bakker, N. Metzl, A. Olsen, C. Sabine, and M. Heimann
Ocean Sci., 9, 193–216, https://doi.org/10.5194/os-9-193-2013, https://doi.org/10.5194/os-9-193-2013, 2013
Related subject area
Biogeochemistry: Air - Land Exchange
Choosing an optimal β factor for relaxed eddy accumulation applications across vegetated and non-vegetated surfaces
Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea
Ice nucleation by viruses and their potential for cloud glaciation
Carbon dioxide fluxes and carbon balance of an agricultural grassland in southern Finland
Sun-induced fluorescence and near-infrared reflectance of vegetation track the seasonal dynamics of gross primary production over Africa
Measurement and modelling of the dynamics of NH3 surface–atmosphere exchange over the Amazonian rainforest
Isoprene and monoterpene emissions from alder, aspen and spruce short-rotation forest plantations in the United Kingdom
Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia)
Subpollen particles (SPP) of birch as carriers of ice nucleating macromolecules
Methane efflux from an American bison herd
Technical note: Inexpensive modification of Exetainers for the reliable storage of trace-level hydrogen and carbon monoxide gas samples
A climate-dependent global model of ammonia emissions from chicken farming
Calculating canopy stomatal conductance from eddy covariance measurements, in light of the energy budget closure problem
Decoupling of a Douglas fir canopy: a look into the subcanopy with continuous vertical temperature profiles
Variations in diurnal and seasonal net ecosystem carbon dioxide exchange in a semiarid sandy grassland ecosystem in China's Horqin Sandy Land
Biogenic volatile organic compound ambient mixing ratios and emission rates in the Alaskan Arctic tundra
Surfaces of silver birch (Betula pendula) are sources of biological ice nuclei: in vivo and in situ investigations
Ideas and perspectives: enhancing the impact of the FLUXNET network of eddy covariance sites
Evapotranspiration over agroforestry sites in Germany
OH reactivity from the emissions of different tree species: investigating the missing reactivity in a boreal forest
Vegetation influence and environmental controls on greenhouse gas fluxes from a drained thermokarst lake in the western Canadian Arctic
Examining the link between vegetation leaf area and land–atmosphere exchange of water, energy, and carbon fluxes using FLUXNET data
CloudRoots: integration of advanced instrumental techniques and process modelling of sub-hourly and sub-kilometre land–atmosphere interactions
Environmental controls on ecosystem-scale cold-season methane and carbon dioxide fluxes in an Arctic tundra ecosystem
Distinguishing between early- and late-covering crops in the land surface model Noah-MP: impact on simulated surface energy fluxes and temperature
A robust data cleaning procedure for eddy covariance flux measurements
Scaling carbon fluxes from eddy covariance sites to globe: synthesis and evaluation of the FLUXCOM approach
Leveraging the signature of heterotrophic respiration on atmospheric CO2 for model benchmarking
Estimating causal networks in biosphere–atmosphere interaction with the PCMCI approach
A double peak in the seasonality of California's photosynthesis as observed from space
Nitrogen use efficiency and N2O and NH3 losses attributed to three fertiliser types applied to an intensively managed silage crop
Biogenic isoprenoid emissions under drought stress: different responses for isoprene and terpenes
Insights from mercury stable isotopes on terrestrial–atmosphere exchange of Hg(0) in the Arctic tundra
Reviews and syntheses: Turning the challenges of partitioning ecosystem evaporation and transpiration into opportunities
El Niño–Southern Oscillation (ENSO) event reduces CO2 uptake of an Indonesian oil palm plantation
Carbon–water flux coupling under progressive drought
Reviews and syntheses: influences of landscape structure and land uses on local to regional climate and air quality
Identification of secondary fatty alcohols in atmospheric aerosols in temperate forests
Modelling land–atmosphere daily exchanges of NO, NH3, and CO2 in a semi-arid grazed ecosystem in Senegal
Simulating the atmospheric CO2 concentration across the heterogeneous landscape of Denmark using a coupled atmosphere–biosphere mesoscale model system
Evaluating multi-year, multi-site data on the energy balance closure of eddy-covariance flux measurements at cropland sites in southwestern Germany
Interpreting eddy covariance data from heterogeneous Siberian tundra: land-cover-specific methane fluxes and spatial representativeness
Global atmospheric CO2 inverse models converging on neutral tropical land exchange, but disagreeing on fossil fuel and atmospheric growth rate
Assessing biotic contributions to CO2 fluxes in northern China using the Vegetation, Photosynthesis and Respiration Model (VPRM-CHINA) and observations from 2005 to 2009
Assessing the dynamics of vegetation productivity in circumpolar regions with different satellite indicators of greenness and photosynthesis
Reviews and syntheses: Carbon use efficiency from organisms to ecosystems – definitions, theories, and empirical evidence
Eddy covariance flux errors due to random and systematic timing errors during data acquisition
Synthetic ozone deposition and stomatal uptake at flux tower sites
Integrated management of a Swiss cropland is not sufficient to preserve its soil carbon pool in the long term
Basic and extensible post-processing of eddy covariance flux data with REddyProc
Teresa Vogl, Amy Hrdina, and Christoph K. Thomas
Biogeosciences, 18, 5097–5115, https://doi.org/10.5194/bg-18-5097-2021, https://doi.org/10.5194/bg-18-5097-2021, 2021
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The relaxed eddy accumulation technique is a method used for measuring fluxes of chemical species in the atmosphere. It relies on a proportionality factor, β, which can be determined using different methods. Also, different techniques for sampling can be used by only drawing air into the measurement system when vertical wind velocity exceeds a certain threshold. We compare different ways to obtain β and different threshold techniques to direct flux measurements for three different sites.
Maria Prass, Meinrat O. Andreae, Alessandro C. de Araùjo, Paulo Artaxo, Florian Ditas, Wolfgang Elbert, Jan-David Förster, Marco Aurélio Franco, Isabella Hrabe de Angelis, Jürgen Kesselmeier, Thomas Klimach, Leslie Ann Kremper, Eckhard Thines, David Walter, Jens Weber, Bettina Weber, Bernhard M. Fuchs, Ulrich Pöschl, and Christopher Pöhlker
Biogeosciences, 18, 4873–4887, https://doi.org/10.5194/bg-18-4873-2021, https://doi.org/10.5194/bg-18-4873-2021, 2021
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Bioaerosols in the atmosphere over the Amazon rain forest were analyzed by molecular biological staining and microscopy. Eukaryotic, bacterial, and archaeal aerosols were quantified in time series and altitude profiles which exhibited clear differences in number concentrations and vertical distributions. Our results provide insights into the sources and dispersion of different Amazonian bioaerosol types as a basis for a better understanding of biosphere–atmosphere interactions.
Michael P. Adams, Nina S. Atanasova, Svetlana Sofieva, Janne Ravantti, Aino Heikkinen, Zoé Brasseur, Jonathan Duplissy, Dennis H. Bamford, and Benjamin J. Murray
Biogeosciences, 18, 4431–4444, https://doi.org/10.5194/bg-18-4431-2021, https://doi.org/10.5194/bg-18-4431-2021, 2021
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The formation of ice in clouds is critically important for the planet's climate. Hence, we need to know which aerosol types nucleate ice and how effectively they do so. Here we show that virus particles, with a range of architectures, nucleate ice when immersed in supercooled water. However, we also show that they only make a minor contribution to the ice-nucleating particle population in the terrestrial atmosphere, but we cannot rule them out as being important in the marine environment.
Laura Heimsch, Annalea Lohila, Juha-Pekka Tuovinen, Henriikka Vekuri, Jussi Heinonsalo, Olli Nevalainen, Mika Korkiakoski, Jari Liski, Tuomas Laurila, and Liisa Kulmala
Biogeosciences, 18, 3467–3483, https://doi.org/10.5194/bg-18-3467-2021, https://doi.org/10.5194/bg-18-3467-2021, 2021
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CO2 and H2O fluxes were measured at a newly established eddy covariance site in southern Finland for 2 years from 2018 to 2020. This agricultural grassland site focuses on the conversion from intensive towards more sustainable agricultural management. The first summer experienced prolonged dry periods, and notably larger fluxes were observed in the second summer. The field acted as a net carbon sink during both study years.
Anteneh Getachew Mengistu, Gizaw Mengistu Tsidu, Gerbrand Koren, Maurits L. Kooreman, K. Folkert Boersma, Torbern Tagesson, Jonas Ardö, Yann Nouvellon, and Wouter Peters
Biogeosciences, 18, 2843–2857, https://doi.org/10.5194/bg-18-2843-2021, https://doi.org/10.5194/bg-18-2843-2021, 2021
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In this study, we assess the usefulness of Sun-Induced Fluorescence of Terrestrial Ecosystems Retrieval (SIFTER) data from the GOME-2A instrument and near-infrared reflectance of vegetation (NIRv) from MODIS to capture the seasonality and magnitudes of gross primary production (GPP) derived from six eddy-covariance flux towers in Africa in the overlap years between 2007–2014. We also test the robustness of sun-induced fluoresence and NIRv to compare the seasonality of GPP for the major biomes.
Robbie Ramsay, Chiara F. Di Marco, Mathew R. Heal, Matthias Sörgel, Paulo Artaxo, Meinrat O. Andreae, and Eiko Nemitz
Biogeosciences, 18, 2809–2825, https://doi.org/10.5194/bg-18-2809-2021, https://doi.org/10.5194/bg-18-2809-2021, 2021
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The exchange of the gas ammonia between the atmosphere and the surface is an important biogeochemical process, but little is known of this exchange for certain ecosystems, such as the Amazon rainforest. This study took measurements of ammonia exchange over an Amazon rainforest site and subsequently modelled the observed deposition and emission patterns. We observed emissions of ammonia from the rainforest, which can be simulated accurately by using a canopy resistance modelling approach.
Gemma Purser, Julia Drewer, Mathew R. Heal, Robert A. S. Sircus, Lara K. Dunn, and James I. L. Morison
Biogeosciences, 18, 2487–2510, https://doi.org/10.5194/bg-18-2487-2021, https://doi.org/10.5194/bg-18-2487-2021, 2021
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Short-rotation forest plantations could help reduce greenhouse gases but can emit biogenic volatile organic compounds. Emissions were measured at a plantation trial in Scotland. Standardised emissions of isoprene from foliage were higher from hybrid aspen than from Sitka spruce and low from Italian alder. Emissions of total monoterpene were lower. The forest floor was only a small source. Model estimates suggest an SRF expansion of 0.7 Mha could increase total UK emissions between < 1 %–35 %.
Daniel Diaz-de-Quijano, Aleksander Vladimirovich Ageev, Elena Anatolevna Ivanova, and Olesia Valerevna Anishchenko
Biogeosciences, 18, 1601–1618, https://doi.org/10.5194/bg-18-1601-2021, https://doi.org/10.5194/bg-18-1601-2021, 2021
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Winter atmospheric nitrogen (N) and phosphorus (P) depositions were measured for the first time in the Western Sayan Mountains (Siberia). The low and very low atmospheric N and P depositions could be responsible for the observed lake phytoplankton N–P colimitation. We hypothesize that slight imbalances in the nutrient deposition, as expected in the context of global change (climate, forest fires and anthropogenic nitrogen emissions), could have important effects on the ecology of these lakes.
Julia Burkart, Jürgen Gratzl, Teresa M. Seifried, Paul Bieber, and Hinrich Grothe
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-8, https://doi.org/10.5194/bg-2021-8, 2021
Revised manuscript accepted for BG
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Extracts of birch pollen grains are known to be ice nucleation active and thus impact cloud formation and climate. In this study we develop an extraction method to separate subpollen particles from ice nucleating macromolecules. For the first time we show that pure subpollen particles are not ice nucleation active. Our results illustrate that the ice nucleating macromolecules can be washed off the subpollen particles and that the ice activity is linked to the presence of proteins.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
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The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Philipp A. Nauer, Eleonora Chiri, Thanavit Jirapanjawat, Chris Greening, and Perran L. M. Cook
Biogeosciences, 18, 729–737, https://doi.org/10.5194/bg-18-729-2021, https://doi.org/10.5194/bg-18-729-2021, 2021
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Hydrogen (H2) and carbon monoxide (CO) are atmospheric trace gases cycled via microbial metabolisms. We observed strong H2 and CO contamination from rubber septa used to seal common gas sample storage vials. Here we propose a simple and inexpensive modification of such vials to allow reliable storage of H2, CO and methane trace-gas samples for timescales of weeks to months, thus enabling extensive field campaigns to investigate H2 and CO biogeochemistry in remote areas.
Jize Jiang, David S. Stevenson, Aimable Uwizeye, Giuseppe Tempio, and Mark A. Sutton
Biogeosciences, 18, 135–158, https://doi.org/10.5194/bg-18-135-2021, https://doi.org/10.5194/bg-18-135-2021, 2021
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Ammonia is a key water and air pollutant and impacts human health and climate change. Ammonia emissions mainly originate from agriculture. We find that chicken agriculture contributes to large ammonia emissions, especially in hot and wet regions. These emissions can be greatly affected by the local environment, i.e. temperature and humidity, and also by human management. We develop a model that suggests ammonia emissions from chicken farming are likely to increase under a warming climate.
Richard Wehr and Scott R. Saleska
Biogeosciences, 18, 13–24, https://doi.org/10.5194/bg-18-13-2021, https://doi.org/10.5194/bg-18-13-2021, 2021
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Water and carbon exchange between plants and the atmosphere is governed by stomata: adjustable pores in the surfaces of leaves. The combined gas conductance of all the stomata in a canopy has long been estimated using an equation that is shown here to be systematically incorrect because it relies on measurements that are generally inadequate. An alternative approach is shown to be more accurate in all probable scenarios and to imply different responses of stomatal conductance to the environment.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Yayi Niu, Yuqiang Li, Hanbo Yun, Xuyang Wang, Xiangwen Gong, Yulong Duan, and Jing Liu
Biogeosciences, 17, 6309–6326, https://doi.org/10.5194/bg-17-6309-2020, https://doi.org/10.5194/bg-17-6309-2020, 2020
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We report the results from continuous year-round CO2 observations from a sandy grassland in the Horqin Sandy Land using the eddy covariance technique. To quantify the diurnal, seasonal, and annual variation in net ecosystem CO2 exchange, gross primary productivity, and ecosystem respiration and to identify the different scales of environmental factors and the underlying mechanisms, we also explored how the annual precipitation affects the net ecosystem CO2 exchange and its components.
Hélène Angot, Katelyn McErlean, Lu Hu, Dylan B. Millet, Jacques Hueber, Kaixin Cui, Jacob Moss, Catherine Wielgasz, Tyler Milligan, Damien Ketcherside, M. Syndonia Bret-Harte, and Detlev Helmig
Biogeosciences, 17, 6219–6236, https://doi.org/10.5194/bg-17-6219-2020, https://doi.org/10.5194/bg-17-6219-2020, 2020
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We report biogenic volatile organic compounds (BVOCs) ambient levels and emission rates from key vegetation species in the Alaskan arctic tundra, providing a new data set to further constrain isoprene chemistry under low NOx conditions in models. We add to the growing body of evidence that climate-induced changes in the vegetation composition will significantly affect the BVOC emission potential of the tundra, with implications for atmospheric oxidation processes and climate feedbacks.
Teresa M. Seifried, Paul Bieber, Laura Felgitsch, Julian Vlasich, Florian Reyzek, David G. Schmale III, and Hinrich Grothe
Biogeosciences, 17, 5655–5667, https://doi.org/10.5194/bg-17-5655-2020, https://doi.org/10.5194/bg-17-5655-2020, 2020
Dario Papale
Biogeosciences, 17, 5587–5598, https://doi.org/10.5194/bg-17-5587-2020, https://doi.org/10.5194/bg-17-5587-2020, 2020
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FLUXNET is a large, bottom-up, self-coordinated network of sites. It provided ecosystem–atmosphere greenhouse gas fluxes from stations around the world that were used as bases for a large number of publications and studies. Today many applications require recent updates on the data to track more closely the ecosystem responses to climate change and link ground data with satellite programs. For this reason, a new organization of FLUXNET is needed, keeping as its target the FAIR principles.
Christian Markwitz, Alexander Knohl, and Lukas Siebicke
Biogeosciences, 17, 5183–5208, https://doi.org/10.5194/bg-17-5183-2020, https://doi.org/10.5194/bg-17-5183-2020, 2020
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Agroforestry has been shown to alter the microclimate and to lead to higher carbon sequestration above ground and in the soil. In this study, we investigated the impact of agroforestry systems on system-scale evapotranspiration (ET) due to concerns about increased water losses to the atmosphere. Results showed small differences in annual sums of ET over agroforestry relative to monoculture systems, indicating that agroforestry in Germany can be a land use alternative to monoculture agriculture.
Arnaud P. Praplan, Toni Tykkä, Simon Schallhart, Virpi Tarvainen, Jaana Bäck, and Heidi Hellén
Biogeosciences, 17, 4681–4705, https://doi.org/10.5194/bg-17-4681-2020, https://doi.org/10.5194/bg-17-4681-2020, 2020
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In this paper, we study emissions of volatile organic compounds (VOCs) from three boreal tree species. Individual compounds are quantified with on-line separation analytical techniques, while the total reactivity of the emissions is measured using a custom-built instrument. On some occasions, in particular when the trees suffer from stress, the total reactivity measured is higher than the sum of the reactivity of individual compounds. This indicates that the threes emit VOCs that remain unknown.
June Skeeter, Andreas Christen, Andrée-Anne Laforce, Elyn Humphreys, and Greg Henry
Biogeosciences, 17, 4421–4441, https://doi.org/10.5194/bg-17-4421-2020, https://doi.org/10.5194/bg-17-4421-2020, 2020
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This study investigates carbon fluxes at Illisarvik, an artificial drained thermokarst lake basin (DTLB) in Canada's Northwest Territories. This is the first carbon balance study in a DTLB outside of Alaska. We used neural networks to identify the factors controlling fluxes and to model the effects of the controlling factors. We discuss the role of vegetation heterogeneity in fluxes, especially of methane, and we show how the carbon fluxes differ from Alaskan DTLBs.
Anne J. Hoek van Dijke, Kaniska Mallick, Martin Schlerf, Miriam Machwitz, Martin Herold, and Adriaan J. Teuling
Biogeosciences, 17, 4443–4457, https://doi.org/10.5194/bg-17-4443-2020, https://doi.org/10.5194/bg-17-4443-2020, 2020
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We investigated the link between the vegetation leaf area index (LAI) and the land–atmosphere exchange of water, energy, and carbon fluxes. We show that the correlation between the LAI and water and energy fluxes depends on the vegetation type and aridity. For carbon fluxes, however, the correlation with the LAI was strong and independent of vegetation and aridity. This study provides insight into when the vegetation LAI can be used to model or extrapolate land–atmosphere fluxes.
Jordi Vilà-Guerau de Arellano, Patrizia Ney, Oscar Hartogensis, Hugo de Boer, Kevin van Diepen, Dzhaner Emin, Geiske de Groot, Anne Klosterhalfen, Matthias Langensiepen, Maria Matveeva, Gabriela Miranda-García, Arnold F. Moene, Uwe Rascher, Thomas Röckmann, Getachew Adnew, Nicolas Brüggemann, Youri Rothfuss, and Alexander Graf
Biogeosciences, 17, 4375–4404, https://doi.org/10.5194/bg-17-4375-2020, https://doi.org/10.5194/bg-17-4375-2020, 2020
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The CloudRoots field experiment has obtained an open comprehensive observational data set that includes soil, plant, and atmospheric variables to investigate the interactions between a heterogeneous land surface and its overlying atmospheric boundary layer, including the rapid perturbations of clouds in evapotranspiration. Our findings demonstrate that in order to understand and represent diurnal variability, we need to measure and model processes from the leaf to the landscape scales.
Dean Howard, Yannick Agnan, Detlev Helmig, Yu Yang, and Daniel Obrist
Biogeosciences, 17, 4025–4042, https://doi.org/10.5194/bg-17-4025-2020, https://doi.org/10.5194/bg-17-4025-2020, 2020
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The Arctic tundra represents a vast store of carbon that may be broken down by microbial activity into greenhouse gases such as CO2 and CH4. Though microbes are less active in winter, the long duration of the cold season makes this period very important for carbon cycling. We show that, under conditions of warmer winter air temperatures and greater snowfall, deeper soils can remain warm enough to sustain significantly enhanced CH4 emission. This could have large implications for future climates.
Kristina Bohm, Joachim Ingwersen, Josipa Milovac, and Thilo Streck
Biogeosciences, 17, 2791–2805, https://doi.org/10.5194/bg-17-2791-2020, https://doi.org/10.5194/bg-17-2791-2020, 2020
Domenico Vitale, Gerardo Fratini, Massimo Bilancia, Giacomo Nicolini, Simone Sabbatini, and Dario Papale
Biogeosciences, 17, 1367–1391, https://doi.org/10.5194/bg-17-1367-2020, https://doi.org/10.5194/bg-17-1367-2020, 2020
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This work describes a data cleaning procedure for the detection of eddy covariance fluxes affected by systematic errors. We believe that the proposed procedure can serve as a basis toward a unified quality control strategy suitable for the centralized data processing pipelines, where the use of completely data-driven and scalable procedures that guarantee high-quality standards and reproducibility of the released products constitutes an essential prerequisite.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Samantha J. Basile, Xin Lin, William R. Wieder, Melannie D. Hartman, and Gretchen Keppel-Aleks
Biogeosciences, 17, 1293–1308, https://doi.org/10.5194/bg-17-1293-2020, https://doi.org/10.5194/bg-17-1293-2020, 2020
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Soil heterotrophic respiration (HR) is an important component of land–atmosphere carbon exchange but is difficult to observe globally. We analyzed the imprint that this flux leaves on atmospheric CO2 using a set of simulations from HR models with common inputs. Models that represent microbial processes are more variable and have stronger temperature sensitivity than those that do not. Our results show that we can use atmospheric CO2 observations to evaluate and improve models of HR.
Christopher Krich, Jakob Runge, Diego G. Miralles, Mirco Migliavacca, Oscar Perez-Priego, Tarek El-Madany, Arnaud Carrara, and Miguel D. Mahecha
Biogeosciences, 17, 1033–1061, https://doi.org/10.5194/bg-17-1033-2020, https://doi.org/10.5194/bg-17-1033-2020, 2020
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Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 17, 405–422, https://doi.org/10.5194/bg-17-405-2020, https://doi.org/10.5194/bg-17-405-2020, 2020
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We present the highest resolution solar-induced chlorophyll fluorescence (SIF) dataset from satellite measurements, providing previously unobservable phenomena related to plant photosynthesis. We find a strong correspondence between TROPOMI SIF and AmeriFlux GPP. We then observe a double peak in the seasonality of California's photosynthesis, not seen by traditional vegetation indices (e.g., MODIS). This is further corroborated by EOF/PC analysis.
Nicholas Cowan, Peter Levy, Andrea Moring, Ivan Simmons, Colin Bache, Amy Stephens, Joana Marinheiro, Jocelyn Brichet, Ling Song, Amy Pickard, Connie McNeill, Roseanne McDonald, Juliette Maire, Benjamin Loubet, Polina Voylokov, Mark Sutton, and Ute Skiba
Biogeosciences, 16, 4731–4745, https://doi.org/10.5194/bg-16-4731-2019, https://doi.org/10.5194/bg-16-4731-2019, 2019
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Commonly used nitrogen fertilisers, ammonium nitrate, urea and urea coated with a urease inhibitor, were applied to experimental plots. Fertilisation with ammonium nitrate supported the largest yields but also resulted in the largest nitrous oxide emissions. Urea was the largest emitter of ammonia. The coated urea did not significantly increase yields; however, ammonia emissions were substantially smaller than urea. The coated urea was the best environmentally but is economically unattractive.
Boris Bonn, Ruth-Kristina Magh, Joseph Rombach, and Jürgen Kreuzwieser
Biogeosciences, 16, 4627–4645, https://doi.org/10.5194/bg-16-4627-2019, https://doi.org/10.5194/bg-16-4627-2019, 2019
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The effect of soil water availability (SWA) on emissions of isoprenoids by trees was studied by setting up a parameterization from published data. SWA impact on isoprene emissions can be described by a growth type curve, while monoterpene emissions display a pattern reflecting plants’ stomata opening. Sesquiterpene fluxes tend to increase at the start of severe drought until resources decline. Feedbacks on atmospheric processes such as ozone and aerosol particles are further studied.
Martin Jiskra, Jeroen E. Sonke, Yannick Agnan, Detlev Helmig, and Daniel Obrist
Biogeosciences, 16, 4051–4064, https://doi.org/10.5194/bg-16-4051-2019, https://doi.org/10.5194/bg-16-4051-2019, 2019
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The tundra plays a pivotal role in Arctic mercury cycling by storing atmospheric mercury deposition and shuttling it to the Arctic Ocean. We used the isotopic fingerprint of mercury to investigate the processes controlling atmospheric mercury deposition. We found that the uptake of atmospheric mercury by vegetation was the major deposition source. Direct deposition to snow or soils only played a minor role. These results improve our understanding of Arctic mercury cycling.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Christian Stiegler, Ana Meijide, Yuanchao Fan, Ashehad Ashween Ali, Tania June, and Alexander Knohl
Biogeosciences, 16, 2873–2890, https://doi.org/10.5194/bg-16-2873-2019, https://doi.org/10.5194/bg-16-2873-2019, 2019
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We show the response of a commercial oil palm plantation in Indonesia to the extreme El Niño–Southern Oscillation (ENSO) event in 2015. Our measurements and model suggest that without human-induced forest fires and related smoke emissions, the observed negative impact on oil palm carbon dioxide greenhouse gas fluxes, carbon accumulation and yield due to ENSO-related drought would have been less pronounced. With respect to climate change we highlight the importance of fire prevention in the area.
Sven Boese, Martin Jung, Nuno Carvalhais, Adriaan J. Teuling, and Markus Reichstein
Biogeosciences, 16, 2557–2572, https://doi.org/10.5194/bg-16-2557-2019, https://doi.org/10.5194/bg-16-2557-2019, 2019
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This study examines how limited water availability during droughts affects water-use efficiency. This metric describes how much carbon an ecosystem can assimilate for each unit of water lost by transpiration. We test how well different water-use efficiency models can capture the dynamics of transpiration decrease due to increased soil-water limitation. Accounting for the interacting effects of radiation and water limitation is necessary to accurately predict transpiration during these periods.
Raia Silvia Massad, Juliette Lathière, Susanna Strada, Mathieu Perrin, Erwan Personne, Marc Stéfanon, Patrick Stella, Sophie Szopa, and Nathalie de Noblet-Ducoudré
Biogeosciences, 16, 2369–2408, https://doi.org/10.5194/bg-16-2369-2019, https://doi.org/10.5194/bg-16-2369-2019, 2019
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Human activities strongly interfere in the land–atmosphere interactions through changes in land use and land cover changes and land management. The objectives of this review are to synthesize the existing experimental and modelling works that investigate physical, chemical, and biogeochemical interactions between land surface and the atmosphere. Greater consideration of atmospheric chemistry, through land–atmosphere interactions, as a decision parameter for land management is essential.
Yuzo Miyazaki, Divyavani Gowda, Eri Tachibana, Yoshiyuki Takahashi, and Tsutom Hiura
Biogeosciences, 16, 2181–2188, https://doi.org/10.5194/bg-16-2181-2019, https://doi.org/10.5194/bg-16-2181-2019, 2019
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Fatty alcohols (FAs) are major components of surface lipids and can act as surface-active atmospheric organic aerosols, influencing the cloud formation. We identified five secondary FAs in atmospheric aerosols at two temperate forest sites and revealed their distinct seasonal variation for the first time. Our results suggest that they originated mostly from plant wax and could be used as useful tracers for primary biological aerosol particles.
Claire Delon, Corinne Galy-Lacaux, Dominique Serça, Erwan Personne, Eric Mougin, Marcellin Adon, Valérie Le Dantec, Benjamin Loubet, Rasmus Fensholt, and Torbern Tagesson
Biogeosciences, 16, 2049–2077, https://doi.org/10.5194/bg-16-2049-2019, https://doi.org/10.5194/bg-16-2049-2019, 2019
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In the Sahel region during the wet season, CO2 and NO are released to the atmosphere, and NH3 is deposited on the soil. During the dry season, processes are strongly reduced. This paper shows the temporal variation in these soil–atmosphere exchanges of trace gases for 2 years, their sharp increase when the first rains fall onto dry soils, and how microbial processes are involved. We use a modelling approach, which is necessary when continuous measurements are not possible in remote regions.
Anne Sofie Lansø, Thomas Luke Smallman, Jesper Heile Christensen, Mathew Williams, Kim Pilegaard, Lise-Lotte Sørensen, and Camilla Geels
Biogeosciences, 16, 1505–1524, https://doi.org/10.5194/bg-16-1505-2019, https://doi.org/10.5194/bg-16-1505-2019, 2019
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Although coastal regions only amount to 7 % of the global oceans, their contribution to the global oceanic surface exchange of CO2 is much greater. In this study, we gain detailed insight into how these coastal marine fluxes compare to CO2 exchange from coastal land regions. Annually, the coastal marine exchanges are smaller than the total uptake of CO2 from the land surfaces within the study area but comparable in size to terrestrial fluxes from individual land cover classes of the region.
Ravshan Eshonkulov, Arne Poyda, Joachim Ingwersen, Hans-Dieter Wizemann, Tobias K. D. Weber, Pascal Kremer, Petra Högy, Alim Pulatov, and Thilo Streck
Biogeosciences, 16, 521–540, https://doi.org/10.5194/bg-16-521-2019, https://doi.org/10.5194/bg-16-521-2019, 2019
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We compared the energy balance closure (EBC) under varying environmental conditions and investigated a wide range of possible reasons for the energy imbalance. As measures for the imbalance, we used ordinary linear regression, the energy balance ratio (EBR), and the energy residual. The EBR was also investigated as a function of buoyancy, friction velocity, and atmospheric stability. Moreover, the relationship between the EBC and flux source area or footprint was also investigated.
Juha-Pekka Tuovinen, Mika Aurela, Juha Hatakka, Aleksi Räsänen, Tarmo Virtanen, Juha Mikola, Viktor Ivakhov, Vladimir Kondratyev, and Tuomas Laurila
Biogeosciences, 16, 255–274, https://doi.org/10.5194/bg-16-255-2019, https://doi.org/10.5194/bg-16-255-2019, 2019
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We analysed ecosystem-scale measurements of methane exchange between Arctic tundra and the atmosphere, taking into account the large variations in vegetation and soil properties. The measurements are spatial averages, but using meteorological and statistical modelling techniques we could estimate methane emissions for different land cover types and quantify how well the measurements correspond to the spatial variability. This provides a more accurate estimate of the regional methane emission.
Benjamin Gaubert, Britton B. Stephens, Sourish Basu, Frédéric Chevallier, Feng Deng, Eric A. Kort, Prabir K. Patra, Wouter Peters, Christian Rödenbeck, Tazu Saeki, David Schimel, Ingrid Van der Laan-Luijkx, Steven Wofsy, and Yi Yin
Biogeosciences, 16, 117–134, https://doi.org/10.5194/bg-16-117-2019, https://doi.org/10.5194/bg-16-117-2019, 2019
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We have compared global carbon budgets calculated from numerical inverse models and CO2 observations, and evaluated how these systems reproduce vertical gradients in atmospheric CO2 from aircraft measurements. We found that available models have converged on near-neutral tropical total fluxes for several decades, implying consistent sinks in intact tropical forests, and that assumed fossil fuel emissions and predicted atmospheric growth rates are now the dominant axes of disagreement.
Archana Dayalu, J. William Munger, Steven C. Wofsy, Yuxuan Wang, Thomas Nehrkorn, Yu Zhao, Michael B. McElroy, Chris P. Nielsen, and Kristina Luus
Biogeosciences, 15, 6713–6729, https://doi.org/10.5194/bg-15-6713-2018, https://doi.org/10.5194/bg-15-6713-2018, 2018
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Accounting for the vegetation signal is critical for comprehensive CO2 budget assessment in China. We model and evaluate hourly vegetation carbon dioxide (CO2) exchange (mass per unit area per unit time) in northern China from 2005 to 2009. The model is driven by satellite and meteorological data, is linked to ground-level ecosystem observations, and is applicable to other time periods. We find vegetation uptake of CO2 in summer is comparable to emissions from fossil fuels in northern China.
Sophia Walther, Luis Guanter, Birgit Heim, Martin Jung, Gregory Duveiller, Aleksandra Wolanin, and Torsten Sachs
Biogeosciences, 15, 6221–6256, https://doi.org/10.5194/bg-15-6221-2018, https://doi.org/10.5194/bg-15-6221-2018, 2018
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We explored the timing of the peak of the short annual growing season in tundra ecosystems as indicated by an extensive suite of satellite indicators of vegetation productivity. Delayed peak greenness compared to peak photosynthesis is consistently found across years and land-cover classes. Plants also experience growth after optimal conditions for assimilation regarding light and temperature have passed. Our results have implications for the modelling of the circumpolar carbon balance.
Stefano Manzoni, Petr Čapek, Philipp Porada, Martin Thurner, Mattias Winterdahl, Christian Beer, Volker Brüchert, Jan Frouz, Anke M. Herrmann, Björn D. Lindahl, Steve W. Lyon, Hana Šantrůčková, Giulia Vico, and Danielle Way
Biogeosciences, 15, 5929–5949, https://doi.org/10.5194/bg-15-5929-2018, https://doi.org/10.5194/bg-15-5929-2018, 2018
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Carbon fixed by plants and phytoplankton through photosynthesis is ultimately stored in soils and sediments or released to the atmosphere during decomposition of dead biomass. Carbon-use efficiency is a useful metric to quantify the fate of carbon – higher efficiency means higher storage and lower release to the atmosphere. Here we summarize many definitions of carbon-use efficiency and study how this metric changes from organisms to ecosystems and from terrestrial to aquatic environments.
Gerardo Fratini, Simone Sabbatini, Kevin Ediger, Brad Riensche, George Burba, Giacomo Nicolini, Domenico Vitale, and Dario Papale
Biogeosciences, 15, 5473–5487, https://doi.org/10.5194/bg-15-5473-2018, https://doi.org/10.5194/bg-15-5473-2018, 2018
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Using a simulation study and field data, we quantify the biases that can be introduced in fluxes measured by eddy covariance (EC) if the raw high-frequency data are affected by random and systematic timing misalignments. Our study was motivated by the increasingly widespread adoption of fully digital EC systems potentially subject to such timing errors. We found biases as large as 10 %. We further propose a test to evaluate EC data logging systems for their time synchronization capabilities.
Jason A. Ducker, Christopher D. Holmes, Trevor F. Keenan, Silvano Fares, Allen H. Goldstein, Ivan Mammarella, J. William Munger, and Jordan Schnell
Biogeosciences, 15, 5395–5413, https://doi.org/10.5194/bg-15-5395-2018, https://doi.org/10.5194/bg-15-5395-2018, 2018
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We have developed an accurate method (SynFlux) to estimate ozone deposition and stomatal uptake across 103 flux tower sites (43 US, 60 Europe), where ozone concentrations and fluxes have not been measured. In all, the SynFlux public dataset provides monthly values of ozone dry deposition for 926 site years across a wide array of ecosystems. The SynFlux dataset will promote further applications to ecosystem, air quality, or climate modeling across the geoscience community.
Carmen Emmel, Annina Winkler, Lukas Hörtnagl, Andrew Revill, Christof Ammann, Petra D'Odorico, Nina Buchmann, and Werner Eugster
Biogeosciences, 15, 5377–5393, https://doi.org/10.5194/bg-15-5377-2018, https://doi.org/10.5194/bg-15-5377-2018, 2018
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It is of great interest to know whether croplands act as a net source or sink of atmospheric CO2 and if soil carbon (C) stocks are preserved over long timescales due to the role of C in soil fertility. For a cropland in Switzerland it was found that managing the field under the Swiss framework of the Proof of Ecological Performance (PEP) resulted in soil C losses of 18.0 %. Additional efforts are needed to bring Swiss management practices closer to the goal of preserving soil C in the long term.
Thomas Wutzler, Antje Lucas-Moffat, Mirco Migliavacca, Jürgen Knauer, Kerstin Sickel, Ladislav Šigut, Olaf Menzer, and Markus Reichstein
Biogeosciences, 15, 5015–5030, https://doi.org/10.5194/bg-15-5015-2018, https://doi.org/10.5194/bg-15-5015-2018, 2018
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Net fluxes of carbon dioxide at the ecosystem level measured by eddy covariance are a main source for understanding biosphere–atmosphere interactions. However, there is a need for more usable and extensible tools for post-processing steps of the half-hourly flux data. Therefore, we developed the REddyProc package, providing data filtering, gap filling, and flux partitioning. The extensible functions are compatible with state-of-the-art tools but allow easier integration in extended analysis.
Cited articles
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Short summary
A decade-long drainage on an Arctic floodplain has altered dominant plant species and soil temperature regimes. Consequently, CO2 exchange rates between the atmosphere and the terrestrial ecosystem were modified: CO2 uptake rates by the terrestrial ecosystem decreased and CO2 emission rates to the atmosphere increased. Ongoing global warming may thaw ice-rich permafrost and make some regions drier in the Arctic, and this will reduce carbon accumulation in the terrestrial ecosystem.
A decade-long drainage on an Arctic floodplain has altered dominant plant species and soil...
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