Articles | Volume 17, issue 13
https://doi.org/10.5194/bg-17-3733-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-3733-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Wide discrepancies in the magnitude and direction of modeled solar-induced chlorophyll fluorescence in response to light conditions
Nicholas C. Parazoo
CORRESPONDING AUTHOR
Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
Troy Magney
Department of Plant Sciences, University of California Davis, Davis, California, USA
Alex Norton
Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
Brett Raczka
School of Biological Sciences, University of Utah, Salt Lake City, Utah, USA
Cédric Bacour
NOVELTIS, 153 rue du Lac, 31670 Labège, France
Fabienne Maignan
Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris‐Saclay, Gif‐sur‐Yvette, France
Ian Baker
Cooperative Institute for Research in the Atmosphere, Colorado State University, Fort Collins, Colorado, USA
Yongguang Zhang
International Institute for Earth System Sciences, Nanjing University, Qixia District, Jiangsu Province, China
Bo Qiu
International Institute for Earth System Sciences, Nanjing University, Qixia District, Jiangsu Province, China
Mingjie Shi
Joint Institute for Regional Earth System Science and Engineering, University of California Los Angeles, Los Angeles, California, USA
Natasha MacBean
Department of Geography, Indiana University Bloomington, Bloomington, Indiana, USA
Dave R. Bowling
School of Biological Sciences, University of Utah, Salt Lake City, Utah, USA
Sean P. Burns
Department of Geography, University of Colorado Boulder, Boulder, Colorado, USA
Mesoscale & Microscale Meteorology Lab, National Center for Atmospheric Research, Boulder, Colorado, USA
Peter D. Blanken
Department of Geography, University of Colorado Boulder, Boulder, Colorado, USA
Jochen Stutz
Atmospheric & Oceanic Sciences, University of California Los Angeles, Los Angeles, California, USA
Katja Grossmann
Institute of Environmental Physics, Heidelberg University, Heidelberg, Germany
Christian Frankenberg
Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA
Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, California, USA
Related authors
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and Luke T. Smallman
EGUsphere, https://doi.org/10.5194/egusphere-2022-1265, https://doi.org/10.5194/egusphere-2022-1265, 2022
Short summary
Short summary
This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
Short summary
Short summary
Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Russell Doughty, Thomas P. Kurosu, Nicholas Parazoo, Philipp Köhler, Yujie Wang, Ying Sun, and Christian Frankenberg
Earth Syst. Sci. Data, 14, 1513–1529, https://doi.org/10.5194/essd-14-1513-2022, https://doi.org/10.5194/essd-14-1513-2022, 2022
Short summary
Short summary
We describe and compare solar-induced chlorophyll fluorescence data produced by NASA from the Greenhouse Gases Observing Satellite (GOSAT) and the Orbiting Carbon Observatory-2 (OCO-2) and OCO-3 platforms.
Yan Yang, A. Anthony Bloom, Shuang Ma, Paul Levine, Alexander Norton, Nicholas C. Parazoo, John T. Reager, John Worden, Gregory R. Quetin, T. Luke Smallman, Mathew Williams, Liang Xu, and Sassan Saatchi
Geosci. Model Dev., 15, 1789–1802, https://doi.org/10.5194/gmd-15-1789-2022, https://doi.org/10.5194/gmd-15-1789-2022, 2022
Short summary
Short summary
Global carbon and water have large uncertainties that are hard to quantify in current regional and global models. Field observations provide opportunities for better calibration and validation of current modeling of carbon and water. With the unique structure of CARDAMOM, we have utilized the data assimilation capability and designed the benchmarking framework by using field observations in modeling. Results show that data assimilation improves model performance in different aspects.
Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
Short summary
Short summary
Uncertainty in the response of photosynthesis to temperature poses a major challenge to predicting the response of forests to climate change. In this paper, we study how photosynthesis in a mountainous evergreen forest is limited by temperature. This study highlights that cold temperature is a key factor that controls spring photosynthesis. Including the cold-temperature limitation in an ecosystem model improved its ability to simulate spring photosynthesis.
Dien Wu, John C. Lin, Henrique F. Duarte, Vineet Yadav, Nicholas C. Parazoo, Tomohiro Oda, and Eric A. Kort
Geosci. Model Dev., 14, 3633–3661, https://doi.org/10.5194/gmd-14-3633-2021, https://doi.org/10.5194/gmd-14-3633-2021, 2021
Short summary
Short summary
A model (SMUrF) is presented that estimates biogenic CO2 fluxes over cities around the globe to separate out biogenic fluxes from anthropogenic emissions. The model leverages satellite-based solar-induced fluorescence data and a machine-learning technique. We evaluate the biogenic fluxes against flux observations and show contrasts between biogenic and anthropogenic fluxes over cities, revealing urban–rural flux gradients, diurnal cycles, and the resulting imprints on atmospheric-column CO2.
Caroline A. Famiglietti, T. Luke Smallman, Paul A. Levine, Sophie Flack-Prain, Gregory R. Quetin, Victoria Meyer, Nicholas C. Parazoo, Stephanie G. Stettz, Yan Yang, Damien Bonal, A. Anthony Bloom, Mathew Williams, and Alexandra G. Konings
Biogeosciences, 18, 2727–2754, https://doi.org/10.5194/bg-18-2727-2021, https://doi.org/10.5194/bg-18-2727-2021, 2021
Short summary
Short summary
Model uncertainty dominates the spread in terrestrial carbon cycle predictions. Efforts to reduce it typically involve adding processes, thereby increasing model complexity. However, if and how model performance scales with complexity is unclear. Using a suite of 16 structurally distinct carbon cycle models, we find that increased complexity only improves skill if parameters are adequately informed. Otherwise, it can degrade skill, and an intermediate-complexity model is optimal.
Junjie Liu, Latha Baskaran, Kevin Bowman, David Schimel, A. Anthony Bloom, Nicholas C. Parazoo, Tomohiro Oda, Dustin Carroll, Dimitris Menemenlis, Joanna Joiner, Roisin Commane, Bruce Daube, Lucianna V. Gatti, Kathryn McKain, John Miller, Britton B. Stephens, Colm Sweeney, and Steven Wofsy
Earth Syst. Sci. Data, 13, 299–330, https://doi.org/10.5194/essd-13-299-2021, https://doi.org/10.5194/essd-13-299-2021, 2021
Short summary
Short summary
On average, the terrestrial biosphere carbon sink is equivalent to ~ 20 % of fossil fuel emissions. Understanding where and why the terrestrial biosphere absorbs carbon from the atmosphere is pivotal to any mitigation policy. Here we present a regionally resolved satellite-constrained net biosphere exchange (NBE) dataset with corresponding uncertainties between 2010–2018: CMS-Flux NBE 2020. The dataset provides a unique perspective on monitoring regional contributions to the CO2 growth rate.
Yuming Jin, Ralph F. Keeling, Eric J. Morgan, Eric Ray, Nicholas C. Parazoo, and Britton B. Stephens
Atmos. Chem. Phys., 21, 217–238, https://doi.org/10.5194/acp-21-217-2021, https://doi.org/10.5194/acp-21-217-2021, 2021
Short summary
Short summary
We propose a new atmospheric coordinate (Mθe) based on equivalent potential temperature (θe) but with mass as the unit. This coordinate is useful in studying the spatial and temporal distribution of long-lived chemical tracers (CO2, CH4, O2 / N2, etc.) from sparse data, like airborne observation. Using this coordinate and sparse airborne observation (HIPPO and ATom), we resolve the Northern Hemisphere mass-weighted average CO2 seasonal cycle with high accuracy.
A. Anthony Bloom, Kevin W. Bowman, Junjie Liu, Alexandra G. Konings, John R. Worden, Nicholas C. Parazoo, Victoria Meyer, John T. Reager, Helen M. Worden, Zhe Jiang, Gregory R. Quetin, T. Luke Smallman, Jean-François Exbrayat, Yi Yin, Sassan S. Saatchi, Mathew Williams, and David S. Schimel
Biogeosciences, 17, 6393–6422, https://doi.org/10.5194/bg-17-6393-2020, https://doi.org/10.5194/bg-17-6393-2020, 2020
Short summary
Short summary
We use a model of the 2001–2015 tropical land carbon cycle, with satellite measurements of land and atmospheric carbon, to disentangle lagged and concurrent effects (due to past and concurrent meteorological events, respectively) on annual land–atmosphere carbon exchanges. The variability of lagged effects explains most 2001–2015 inter-annual carbon flux variations. We conclude that concurrent and lagged effects need to be accurately resolved to better predict the world's land carbon sink.
Simon Jones, Lucy Rowland, Peter Cox, Deborah Hemming, Andy Wiltshire, Karina Williams, Nicholas C. Parazoo, Junjie Liu, Antonio C. L. da Costa, Patrick Meir, Maurizio Mencuccini, and Anna B. Harper
Biogeosciences, 17, 3589–3612, https://doi.org/10.5194/bg-17-3589-2020, https://doi.org/10.5194/bg-17-3589-2020, 2020
Short summary
Short summary
Non-structural carbohydrates (NSCs) are an important set of molecules that help plants to grow and respire when photosynthesis is restricted by extreme climate events. In this paper we present a simple model of NSC storage and assess the effect that it has on simulations of vegetation at the ecosystem scale. Our model has the potential to significantly change predictions of plant behaviour in global vegetation models, which would have large implications for predictions of the future climate.
Alexandra G. Konings, A. Anthony Bloom, Junjie Liu, Nicholas C. Parazoo, David S. Schimel, and Kevin W. Bowman
Biogeosciences, 16, 2269–2284, https://doi.org/10.5194/bg-16-2269-2019, https://doi.org/10.5194/bg-16-2269-2019, 2019
Short summary
Short summary
We estimate heterotrophic respiration (Rh) – the respiration from microbes in the soil – using satellite estimates of the net carbon flux and other quantities. Rh is an important carbon flux but is rarely studied by itself. Our method is the first to estimate how Rh varies in both space and time. The resulting new estimate of Rh is compared to the best currently available alternative, which is based on interpolating field measurements globally. The two estimates disagree and are both uncertain.
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
Short summary
Short summary
Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
D. Wunch, P. O. Wennberg, J. Messerschmidt, N. C. Parazoo, G. C. Toon, N. M. Deutscher, G. Keppel-Aleks, C. M. Roehl, J. T. Randerson, T. Warneke, and J. Notholt
Atmos. Chem. Phys., 13, 9447–9459, https://doi.org/10.5194/acp-13-9447-2013, https://doi.org/10.5194/acp-13-9447-2013, 2013
Vincent Humphrey and Christian Frankenberg
Biogeosciences, 20, 1789–1811, https://doi.org/10.5194/bg-20-1789-2023, https://doi.org/10.5194/bg-20-1789-2023, 2023
Short summary
Short summary
Microwave satellites can be used to monitor how vegetation biomass changes over time or how droughts affect the world's forests. However, such satellite data are still difficult to validate and interpret because of a lack of comparable field observations. Here, we present a remote sensing technique that uses the Global Navigation Satellite System (GNSS) as a makeshift radar, making it possible to observe canopy transmissivity at any existing environmental research site in a cost-efficient way.
Santo Fedele Colosimo, Nathaniel Brockway, Vijay Natraj, Robert Spurr, Klaus Pfeilsticker, Lisa Scalone, Max Spolaor, Sarah Woods, and Jochen Stutz
Atmos. Meas. Tech. Discuss., https://doi.org/10.5194/amt-2023-85, https://doi.org/10.5194/amt-2023-85, 2023
Preprint under review for AMT
Short summary
Short summary
Cirrus clouds are poorly understood components of the climate system, in part due to the challenge of observing thin, sub-visible, ice clouds. We address this issue with a new observational approach that uses the remote sensing of near-infrared ice water absorption features from a high-altitude aircraft. We describe the underlying principle of this approach and present a new procedure to retrieve ice concentration in cirrus clouds. Our retrievals compare well with in-situ observations.
Cédric Bacour, Natasha MacBean, Frédéric Chevallier, Sébastien Léonard, Ernest N. Koffi, and Philippe Peylin
Biogeosciences, 20, 1089–1111, https://doi.org/10.5194/bg-20-1089-2023, https://doi.org/10.5194/bg-20-1089-2023, 2023
Short summary
Short summary
The impact of assimilating different dataset combinations on regional to global-scale C budgets is explored with the ORCHIDEE model. Assimilating simultaneously multiple datasets is preferable to optimize the values of the model parameters and avoid model overfitting. The challenges in constraining soil C disequilibrium using atmospheric CO2 data are highlighted for an accurate prediction of the land sink distribution.
Yuan Zhang, Devaraju Narayanappa, Philippe Ciais, Wei Li, Daniel Goll, Nicolas Vuichard, Martin G. De Kauwe, Laurent Li, and Fabienne Maignan
Geosci. Model Dev., 15, 9111–9125, https://doi.org/10.5194/gmd-15-9111-2022, https://doi.org/10.5194/gmd-15-9111-2022, 2022
Short summary
Short summary
There are a few studies to examine if current models correctly represented the complex processes of transpiration. Here, we use a coefficient Ω, which indicates if transpiration is mainly controlled by vegetation processes or by turbulence, to evaluate the ORCHIDEE model. We found a good performance of ORCHIDEE, but due to compensation of biases in different processes, we also identified how different factors control Ω and where the model is wrong. Our method is generic to evaluate other models.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and Luke T. Smallman
EGUsphere, https://doi.org/10.5194/egusphere-2022-1265, https://doi.org/10.5194/egusphere-2022-1265, 2022
Short summary
Short summary
This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
Short summary
Short summary
Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 4705–4714, https://doi.org/10.5194/bg-19-4705-2022, https://doi.org/10.5194/bg-19-4705-2022, 2022
Short summary
Short summary
Plant hydraulics is often misrepresented in topical research. We highlight the commonly seen ambiguities and/or mistakes, with equations and figures to help visualize the potential biases. We recommend careful thinking when using or modifying existing plant hydraulic terms, methods, and models.
Jan De Pue, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Manuela Balzarolo, Fabienne Maignan, and Françoise Gellens-Meulenberghs
Biogeosciences, 19, 4361–4386, https://doi.org/10.5194/bg-19-4361-2022, https://doi.org/10.5194/bg-19-4361-2022, 2022
Short summary
Short summary
The functioning of ecosystems involves numerous biophysical processes which interact with each other. Land surface models (LSMs) are used to describe these processes and form an essential component of climate models. In this paper, we evaluate the performance of three LSMs and their interactions with soil moisture and vegetation. Though we found room for improvement in the simulation of soil moisture and drought stress, the main cause of errors was related to the simulated growth of vegetation.
Jing M. Chen, Rong Wang, Yihong Liu, Liming He, Holly Croft, Xiangzhong Luo, Han Wang, Nicholas G. Smith, Trevor F. Keenan, I. Colin Prentice, Yongguang Zhang, Weimin Ju, and Ning Dong
Earth Syst. Sci. Data, 14, 4077–4093, https://doi.org/10.5194/essd-14-4077-2022, https://doi.org/10.5194/essd-14-4077-2022, 2022
Short summary
Short summary
Green leaves contain chlorophyll pigments that harvest light for photosynthesis and also emit chlorophyll fluorescence as a byproduct. Both chlorophyll pigments and fluorescence can be measured by Earth-orbiting satellite sensors. Here we demonstrate that leaf photosynthetic capacity can be reliably derived globally using these measurements. This new satellite-based information overcomes a bottleneck in global ecological research where such spatially explicit information is currently lacking.
Yujie Wang and Christian Frankenberg
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-172, https://doi.org/10.5194/bg-2022-172, 2022
Revised manuscript not accepted
Short summary
Short summary
Leaf light absorption coefficient is often not measured along with leaf gas exchange, but assumed to be constant. This potentially causes biases in estimated photosynthetic capacity and modeled photosynthetic rates. We explored how leaf light absorption features and light source may impact the photosynthesis modeling, and found that the biases are dependent of model assumptions. Researchers need to be more cautious with these inaccurate assumptions in photosynthesis models.
Nina Raoult, Sylvie Charbit, Christophe Dumas, Fabienne Maignan, Catherine Ottlé, and Vladislav Bastrikov
EGUsphere, https://doi.org/10.5194/egusphere-2022-745, https://doi.org/10.5194/egusphere-2022-745, 2022
Short summary
Short summary
Greenland ice sheet melting due to global warming could significantly impact the global sea-level rise. The ice sheet's albedo, i.e., how reflective the surface is, affects the melting speed. The ORCHIDEE computer model is used to simulate albedo and snow melt to make predictions. However, the albedo in ORCHIDEE is lower than that observed using satellites. To correct this, we change model parameters (e.g., the rate of snow decay) to reduce the difference between simulated and observed values.
Daniel J. Jacob, Daniel J. Varon, Daniel H. Cusworth, Philip E. Dennison, Christian Frankenberg, Ritesh Gautam, Luis Guanter, John Kelley, Jason McKeever, Lesley E. Ott, Benjamin Poulter, Zhen Qu, Andrew K. Thorpe, John R. Worden, and Riley M. Duren
Atmos. Chem. Phys., 22, 9617–9646, https://doi.org/10.5194/acp-22-9617-2022, https://doi.org/10.5194/acp-22-9617-2022, 2022
Short summary
Short summary
We review the capability of satellite observations of atmospheric methane to quantify methane emissions on all scales. We cover retrieval methods, precision requirements, inverse methods for inferring emissions, source detection thresholds, and observations of system completeness. We show that current instruments already enable quantification of regional and national emissions including contributions from large point sources. Coverage and resolution will increase significantly in coming years.
Camille Abadie, Fabienne Maignan, Marine Remaud, Jérôme Ogée, J. Elliott Campbell, Mary E. Whelan, Florian Kitz, Felix M. Spielmann, Georg Wohlfahrt, Richard Wehr, Wu Sun, Nina Raoult, Ulli Seibt, Didier Hauglustaine, Sinikka T. Lennartz, Sauveur Belviso, David Montagne, and Philippe Peylin
Biogeosciences, 19, 2427–2463, https://doi.org/10.5194/bg-19-2427-2022, https://doi.org/10.5194/bg-19-2427-2022, 2022
Short summary
Short summary
A better constraint of the components of the carbonyl sulfide (COS) global budget is needed to exploit its potential as a proxy of gross primary productivity. In this study, we compare two representations of oxic soil COS fluxes, and we develop an approach to represent anoxic soil COS fluxes in a land surface model. We show the importance of atmospheric COS concentration variations on oxic soil COS fluxes and provide new estimates for oxic and anoxic soil contributions to the COS global budget.
Russell Doughty, Thomas P. Kurosu, Nicholas Parazoo, Philipp Köhler, Yujie Wang, Ying Sun, and Christian Frankenberg
Earth Syst. Sci. Data, 14, 1513–1529, https://doi.org/10.5194/essd-14-1513-2022, https://doi.org/10.5194/essd-14-1513-2022, 2022
Short summary
Short summary
We describe and compare solar-induced chlorophyll fluorescence data produced by NASA from the Greenhouse Gases Observing Satellite (GOSAT) and the Orbiting Carbon Observatory-2 (OCO-2) and OCO-3 platforms.
Johannes Gensheimer, Alexander J. Turner, Philipp Köhler, Christian Frankenberg, and Jia Chen
Biogeosciences, 19, 1777–1793, https://doi.org/10.5194/bg-19-1777-2022, https://doi.org/10.5194/bg-19-1777-2022, 2022
Short summary
Short summary
We develop a convolutional neural network, named SIFnet, that increases the spatial resolution of SIF from TROPOMI by a factor of 10 to a spatial resolution of 0.005°. SIFnet utilizes coarse SIF observations, together with a broad range of high-resolution auxiliary data. The insights gained from interpretable machine learning techniques allow us to make quantitative claims about the relationships between SIF and other common parameters related to photosynthesis.
Yan Yang, A. Anthony Bloom, Shuang Ma, Paul Levine, Alexander Norton, Nicholas C. Parazoo, John T. Reager, John Worden, Gregory R. Quetin, T. Luke Smallman, Mathew Williams, Liang Xu, and Sassan Saatchi
Geosci. Model Dev., 15, 1789–1802, https://doi.org/10.5194/gmd-15-1789-2022, https://doi.org/10.5194/gmd-15-1789-2022, 2022
Short summary
Short summary
Global carbon and water have large uncertainties that are hard to quantify in current regional and global models. Field observations provide opportunities for better calibration and validation of current modeling of carbon and water. With the unique structure of CARDAMOM, we have utilized the data assimilation capability and designed the benchmarking framework by using field observations in modeling. Results show that data assimilation improves model performance in different aspects.
Marine Remaud, Frédéric Chevallier, Fabienne Maignan, Sauveur Belviso, Antoine Berchet, Alexandra Parouffe, Camille Abadie, Cédric Bacour, Sinikka Lennartz, and Philippe Peylin
Atmos. Chem. Phys., 22, 2525–2552, https://doi.org/10.5194/acp-22-2525-2022, https://doi.org/10.5194/acp-22-2525-2022, 2022
Short summary
Short summary
Carbonyl sulfide (COS) has been recognized as a promising indicator of the plant gross primary production (GPP). Here, we assimilate both COS and CO2 measurements into an atmospheric transport model to obtain information on GPP, plant respiration and COS budget. A possible scenario for the period 2008–2019 leads to a global COS biospheric sink of 800 GgS yr−1 and higher oceanic emissions between 400 and 600 GgS yr−1.
Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
Short summary
Short summary
Uncertainty in the response of photosynthesis to temperature poses a major challenge to predicting the response of forests to climate change. In this paper, we study how photosynthesis in a mountainous evergreen forest is limited by temperature. This study highlights that cold temperature is a key factor that controls spring photosynthesis. Including the cold-temperature limitation in an ecosystem model improved its ability to simulate spring photosynthesis.
Hélène Peiro, Sean Crowell, Andrew Schuh, David F. Baker, Chris O'Dell, Andrew R. Jacobson, Frédéric Chevallier, Junjie Liu, Annmarie Eldering, David Crisp, Feng Deng, Brad Weir, Sourish Basu, Matthew S. Johnson, Sajeev Philip, and Ian Baker
Atmos. Chem. Phys., 22, 1097–1130, https://doi.org/10.5194/acp-22-1097-2022, https://doi.org/10.5194/acp-22-1097-2022, 2022
Short summary
Short summary
Satellite CO2 observations are constantly improved. We study an ensemble of different atmospheric models (inversions) from 2015 to 2018 using separate ground-based data or two versions of the OCO-2 satellite. Our study aims to determine if different satellite data corrections can yield different estimates of carbon cycle flux. A difference in the carbon budget between the two versions is found over tropical Africa, which seems to show the impact of corrections applied in satellite data.
Yujie Wang and Christian Frankenberg
Biogeosciences, 19, 29–45, https://doi.org/10.5194/bg-19-29-2022, https://doi.org/10.5194/bg-19-29-2022, 2022
Short summary
Short summary
Modeling vegetation canopy is important in predicting whether the land remains a carbon sink to mitigate climate change in the near future. Vegetation canopy model complexity, however, impacts the model-predicted carbon and water fluxes as well as canopy fluorescence, even if the same suite of model inputs is used. Given the biases caused by canopy model complexity, we recommend not misusing parameters inverted using different models or assumptions.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 18, 6579–6588, https://doi.org/10.5194/bg-18-6579-2021, https://doi.org/10.5194/bg-18-6579-2021, 2021
Short summary
Short summary
This work builds a high-resolution estimate (500 m) of gross primary productivity (GPP) over the US using satellite measurements of solar-induced chlorophyll fluorescence (SIF) from the TROPOspheric Monitoring Instrument (TROPOMI) between 2018 and 2020. We identify ecosystem-specific scaling factors for estimating gross primary productivity (GPP) from TROPOMI SIF. Extreme precipitation events drive four regional GPP anomalies that account for 28 % of year-to-year GPP differences across the US.
Siraput Jongaramrungruang, Georgios Matheou, Andrew K. Thorpe, Zhao-Cheng Zeng, and Christian Frankenberg
Atmos. Meas. Tech., 14, 7999–8017, https://doi.org/10.5194/amt-14-7999-2021, https://doi.org/10.5194/amt-14-7999-2021, 2021
Short summary
Short summary
This study shows how precision error and bias in column methane retrieval change with different instrument specifications and the impact of spectrally complex surface albedos on retrievals. We show how surface interferences can be mitigated with an optimal spectral resolution and a higher polynomial degree in a retrieval process. The findings can inform future satellite instrument designs to have robust observations capable of separating real CH4 plume enhancements from surface interferences.
Linda M. J. Kooijmans, Ara Cho, Jin Ma, Aleya Kaushik, Katherine D. Haynes, Ian Baker, Ingrid T. Luijkx, Mathijs Groenink, Wouter Peters, John B. Miller, Joseph A. Berry, Jerome Ogée, Laura K. Meredith, Wu Sun, Kukka-Maaria Kohonen, Timo Vesala, Ivan Mammarella, Huilin Chen, Felix M. Spielmann, Georg Wohlfahrt, Max Berkelhammer, Mary E. Whelan, Kadmiel Maseyk, Ulli Seibt, Roisin Commane, Richard Wehr, and Maarten Krol
Biogeosciences, 18, 6547–6565, https://doi.org/10.5194/bg-18-6547-2021, https://doi.org/10.5194/bg-18-6547-2021, 2021
Short summary
Short summary
The gas carbonyl sulfide (COS) can be used to estimate photosynthesis. To adopt this approach on regional and global scales, we need biosphere models that can simulate COS exchange. So far, such models have not been evaluated against observations. We evaluate the COS biosphere exchange of the SiB4 model against COS flux observations. We find that the model is capable of simulating key processes in COS biosphere exchange. Still, we give recommendations for further improvement of the model.
Luis Guanter, Cédric Bacour, Andreas Schneider, Ilse Aben, Tim A. van Kempen, Fabienne Maignan, Christian Retscher, Philipp Köhler, Christian Frankenberg, Joanna Joiner, and Yongguang Zhang
Earth Syst. Sci. Data, 13, 5423–5440, https://doi.org/10.5194/essd-13-5423-2021, https://doi.org/10.5194/essd-13-5423-2021, 2021
Short summary
Short summary
Sun-induced chlorophyll fluorescence (SIF) is an electromagnetic signal emitted by plants in the red and far-red parts of the spectrum. It has a functional link to photosynthesis and can be measured by satellite instruments, which makes it an important variable for the remote monitoring of the photosynthetic activity of vegetation ecosystems around the world. In this contribution we present a SIF dataset derived from the new Sentinel-5P TROPOMI missions.
Yujie Wang, Philipp Köhler, Liyin He, Russell Doughty, Renato K. Braghiere, Jeffrey D. Wood, and Christian Frankenberg
Geosci. Model Dev., 14, 6741–6763, https://doi.org/10.5194/gmd-14-6741-2021, https://doi.org/10.5194/gmd-14-6741-2021, 2021
Short summary
Short summary
We present the first step in testing a new land model as part of a new Earth system model. Our model links plant hydraulics, stomatal optimization theory, and a comprehensive canopy radiation scheme. We compared model-predicted carbon and water fluxes to flux tower observations and model-predicted sun-induced chlorophyll fluorescence to satellite retrievals. Our model quantitatively predicted the carbon and water fluxes as well as the canopy fluorescence yield.
Yi Yin, Frederic Chevallier, Philippe Ciais, Philippe Bousquet, Marielle Saunois, Bo Zheng, John Worden, A. Anthony Bloom, Robert J. Parker, Daniel J. Jacob, Edward J. Dlugokencky, and Christian Frankenberg
Atmos. Chem. Phys., 21, 12631–12647, https://doi.org/10.5194/acp-21-12631-2021, https://doi.org/10.5194/acp-21-12631-2021, 2021
Short summary
Short summary
The growth of methane, the second-most important anthropogenic greenhouse gas after carbon dioxide, has been accelerating in recent years. Using an ensemble of multi-tracer atmospheric inversions constrained by surface or satellite observations, we show that global methane emissions increased by nearly 1 % per year from 2010–2017, with leading contributions from the tropics and East Asia.
Xiaolu Ling, Ying Huang, Weidong Guo, Yixin Wang, Chaorong Chen, Bo Qiu, Jun Ge, Kai Qin, Yong Xue, and Jian Peng
Hydrol. Earth Syst. Sci., 25, 4209–4229, https://doi.org/10.5194/hess-25-4209-2021, https://doi.org/10.5194/hess-25-4209-2021, 2021
Short summary
Short summary
Soil moisture (SM) plays a critical role in the water and energy cycles of the Earth system, for which a long-term SM product with high quality is urgently needed. In situ observations are generally treated as the true value to systematically evaluate five SM products, including one remote sensing product and four reanalysis data sets during 1981–2013. This long-term intercomparison study provides clues for SM product enhancement and further hydrological applications.
Dien Wu, John C. Lin, Henrique F. Duarte, Vineet Yadav, Nicholas C. Parazoo, Tomohiro Oda, and Eric A. Kort
Geosci. Model Dev., 14, 3633–3661, https://doi.org/10.5194/gmd-14-3633-2021, https://doi.org/10.5194/gmd-14-3633-2021, 2021
Short summary
Short summary
A model (SMUrF) is presented that estimates biogenic CO2 fluxes over cities around the globe to separate out biogenic fluxes from anthropogenic emissions. The model leverages satellite-based solar-induced fluorescence data and a machine-learning technique. We evaluate the biogenic fluxes against flux observations and show contrasts between biogenic and anthropogenic fluxes over cities, revealing urban–rural flux gradients, diurnal cycles, and the resulting imprints on atmospheric-column CO2.
Fabienne Maignan, Camille Abadie, Marine Remaud, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Róisín Commane, Richard Wehr, J. Elliott Campbell, Sauveur Belviso, Stephen A. Montzka, Nina Raoult, Ulli Seibt, Yoichi P. Shiga, Nicolas Vuichard, Mary E. Whelan, and Philippe Peylin
Biogeosciences, 18, 2917–2955, https://doi.org/10.5194/bg-18-2917-2021, https://doi.org/10.5194/bg-18-2917-2021, 2021
Short summary
Short summary
The assimilation of carbonyl sulfide (COS) by continental vegetation has been proposed as a proxy for gross primary production (GPP). Using a land surface and a transport model, we compare a mechanistic representation of the plant COS uptake (Berry et al., 2013) to the classical leaf relative uptake (LRU) approach linking GPP and vegetation COS fluxes. We show that at high temporal resolutions a mechanistic approach is mandatory, but at large scales the LRU approach compares similarly.
Caroline A. Famiglietti, T. Luke Smallman, Paul A. Levine, Sophie Flack-Prain, Gregory R. Quetin, Victoria Meyer, Nicholas C. Parazoo, Stephanie G. Stettz, Yan Yang, Damien Bonal, A. Anthony Bloom, Mathew Williams, and Alexandra G. Konings
Biogeosciences, 18, 2727–2754, https://doi.org/10.5194/bg-18-2727-2021, https://doi.org/10.5194/bg-18-2727-2021, 2021
Short summary
Short summary
Model uncertainty dominates the spread in terrestrial carbon cycle predictions. Efforts to reduce it typically involve adding processes, thereby increasing model complexity. However, if and how model performance scales with complexity is unclear. Using a suite of 16 structurally distinct carbon cycle models, we find that increased complexity only improves skill if parameters are adequately informed. Otherwise, it can degrade skill, and an intermediate-complexity model is optimal.
Hiroki Mizuochi, Agnès Ducharne, Frédérique Cheruy, Josefine Ghattas, Amen Al-Yaari, Jean-Pierre Wigneron, Vladislav Bastrikov, Philippe Peylin, Fabienne Maignan, and Nicolas Vuichard
Hydrol. Earth Syst. Sci., 25, 2199–2221, https://doi.org/10.5194/hess-25-2199-2021, https://doi.org/10.5194/hess-25-2199-2021, 2021
Yan Sun, Daniel S. Goll, Jinfeng Chang, Philippe Ciais, Betrand Guenet, Julian Helfenstein, Yuanyuan Huang, Ronny Lauerwald, Fabienne Maignan, Victoria Naipal, Yilong Wang, Hui Yang, and Haicheng Zhang
Geosci. Model Dev., 14, 1987–2010, https://doi.org/10.5194/gmd-14-1987-2021, https://doi.org/10.5194/gmd-14-1987-2021, 2021
Short summary
Short summary
We evaluated the performance of the nutrient-enabled version of the land surface model ORCHIDEE-CNP v1.2 against remote sensing, ground-based measurement networks and ecological databases. The simulated carbon, nitrogen and phosphorus fluxes among different spatial scales are generally in good agreement with data-driven estimates. However, the recent carbon sink in the Northern Hemisphere is substantially underestimated. Potential causes and model development priorities are discussed.
Jakob Borchardt, Konstantin Gerilowski, Sven Krautwurst, Heinrich Bovensmann, Andrew K. Thorpe, David R. Thompson, Christian Frankenberg, Charles E. Miller, Riley M. Duren, and John Philip Burrows
Atmos. Meas. Tech., 14, 1267–1291, https://doi.org/10.5194/amt-14-1267-2021, https://doi.org/10.5194/amt-14-1267-2021, 2021
Short summary
Short summary
The AVIRIS-NG hyperspectral imager has been used successfully to identify and quantify anthropogenic methane sources utilizing different retrieval and inversion methods. Here, we examine the adaption and application of the WFM-DOAS algorithm to AVIRIS-NG measurements to retrieve local methane column enhancements, compare the results with other retrievals, and quantify the uncertainties resulting from the retrieval method. Additionally, we estimate emissions from five detected methane plumes.
Junjie Liu, Latha Baskaran, Kevin Bowman, David Schimel, A. Anthony Bloom, Nicholas C. Parazoo, Tomohiro Oda, Dustin Carroll, Dimitris Menemenlis, Joanna Joiner, Roisin Commane, Bruce Daube, Lucianna V. Gatti, Kathryn McKain, John Miller, Britton B. Stephens, Colm Sweeney, and Steven Wofsy
Earth Syst. Sci. Data, 13, 299–330, https://doi.org/10.5194/essd-13-299-2021, https://doi.org/10.5194/essd-13-299-2021, 2021
Short summary
Short summary
On average, the terrestrial biosphere carbon sink is equivalent to ~ 20 % of fossil fuel emissions. Understanding where and why the terrestrial biosphere absorbs carbon from the atmosphere is pivotal to any mitigation policy. Here we present a regionally resolved satellite-constrained net biosphere exchange (NBE) dataset with corresponding uncertainties between 2010–2018: CMS-Flux NBE 2020. The dataset provides a unique perspective on monitoring regional contributions to the CO2 growth rate.
Yuming Jin, Ralph F. Keeling, Eric J. Morgan, Eric Ray, Nicholas C. Parazoo, and Britton B. Stephens
Atmos. Chem. Phys., 21, 217–238, https://doi.org/10.5194/acp-21-217-2021, https://doi.org/10.5194/acp-21-217-2021, 2021
Short summary
Short summary
We propose a new atmospheric coordinate (Mθe) based on equivalent potential temperature (θe) but with mass as the unit. This coordinate is useful in studying the spatial and temporal distribution of long-lived chemical tracers (CO2, CH4, O2 / N2, etc.) from sparse data, like airborne observation. Using this coordinate and sparse airborne observation (HIPPO and ATom), we resolve the Northern Hemisphere mass-weighted average CO2 seasonal cycle with high accuracy.
A. Anthony Bloom, Kevin W. Bowman, Junjie Liu, Alexandra G. Konings, John R. Worden, Nicholas C. Parazoo, Victoria Meyer, John T. Reager, Helen M. Worden, Zhe Jiang, Gregory R. Quetin, T. Luke Smallman, Jean-François Exbrayat, Yi Yin, Sassan S. Saatchi, Mathew Williams, and David S. Schimel
Biogeosciences, 17, 6393–6422, https://doi.org/10.5194/bg-17-6393-2020, https://doi.org/10.5194/bg-17-6393-2020, 2020
Short summary
Short summary
We use a model of the 2001–2015 tropical land carbon cycle, with satellite measurements of land and atmospheric carbon, to disentangle lagged and concurrent effects (due to past and concurrent meteorological events, respectively) on annual land–atmosphere carbon exchanges. The variability of lagged effects explains most 2001–2015 inter-annual carbon flux variations. We conclude that concurrent and lagged effects need to be accurately resolved to better predict the world's land carbon sink.
Yuan Zhang, Ana Bastos, Fabienne Maignan, Daniel Goll, Olivier Boucher, Laurent Li, Alessandro Cescatti, Nicolas Vuichard, Xiuzhi Chen, Christof Ammann, M. Altaf Arain, T. Andrew Black, Bogdan Chojnicki, Tomomichi Kato, Ivan Mammarella, Leonardo Montagnani, Olivier Roupsard, Maria J. Sanz, Lukas Siebicke, Marek Urbaniak, Francesco Primo Vaccari, Georg Wohlfahrt, Will Woodgate, and Philippe Ciais
Geosci. Model Dev., 13, 5401–5423, https://doi.org/10.5194/gmd-13-5401-2020, https://doi.org/10.5194/gmd-13-5401-2020, 2020
Short summary
Short summary
We improved the ORCHIDEE LSM by distinguishing diffuse and direct light in canopy and evaluated the new model with observations from 159 sites. Compared with the old model, the new model has better sunny GPP and reproduced the diffuse light fertilization effect observed at flux sites. Our simulations also indicate different mechanisms causing the observed GPP enhancement under cloudy conditions at different times. The new model has the potential to study large-scale impacts of aerosol changes.
Rui Cheng, Troy S. Magney, Debsunder Dutta, David R. Bowling, Barry A. Logan, Sean P. Burns, Peter D. Blanken, Katja Grossmann, Sophia Lopez, Andrew D. Richardson, Jochen Stutz, and Christian Frankenberg
Biogeosciences, 17, 4523–4544, https://doi.org/10.5194/bg-17-4523-2020, https://doi.org/10.5194/bg-17-4523-2020, 2020
Short summary
Short summary
We measured reflected sunlight from an evergreen canopy for a year to detect changes in pigments that play an important role in regulating the seasonality of photosynthesis. Results show a strong mechanistic link between spectral reflectance features and pigment content, which is validated using a biophysical model. Our results show spectrally where, why, and when spectral features change over the course of the season and show promise for estimating photosynthesis remotely.
S. Wang, Z. Li, Y. Zhang, D. Yang, and C. Ni
ISPRS Ann. Photogramm. Remote Sens. Spatial Inf. Sci., V-3-2020, 571–578, https://doi.org/10.5194/isprs-annals-V-3-2020-571-2020, https://doi.org/10.5194/isprs-annals-V-3-2020-571-2020, 2020
Marielle Saunois, Ann R. Stavert, Ben Poulter, Philippe Bousquet, Josep G. Canadell, Robert B. Jackson, Peter A. Raymond, Edward J. Dlugokencky, Sander Houweling, Prabir K. Patra, Philippe Ciais, Vivek K. Arora, David Bastviken, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Lori Bruhwiler, Kimberly M. Carlson, Mark Carrol, Simona Castaldi, Naveen Chandra, Cyril Crevoisier, Patrick M. Crill, Kristofer Covey, Charles L. Curry, Giuseppe Etiope, Christian Frankenberg, Nicola Gedney, Michaela I. Hegglin, Lena Höglund-Isaksson, Gustaf Hugelius, Misa Ishizawa, Akihiko Ito, Greet Janssens-Maenhout, Katherine M. Jensen, Fortunat Joos, Thomas Kleinen, Paul B. Krummel, Ray L. Langenfelds, Goulven G. Laruelle, Licheng Liu, Toshinobu Machida, Shamil Maksyutov, Kyle C. McDonald, Joe McNorton, Paul A. Miller, Joe R. Melton, Isamu Morino, Jurek Müller, Fabiola Murguia-Flores, Vaishali Naik, Yosuke Niwa, Sergio Noce, Simon O'Doherty, Robert J. Parker, Changhui Peng, Shushi Peng, Glen P. Peters, Catherine Prigent, Ronald Prinn, Michel Ramonet, Pierre Regnier, William J. Riley, Judith A. Rosentreter, Arjo Segers, Isobel J. Simpson, Hao Shi, Steven J. Smith, L. Paul Steele, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Francesco N. Tubiello, Aki Tsuruta, Nicolas Viovy, Apostolos Voulgarakis, Thomas S. Weber, Michiel van Weele, Guido R. van der Werf, Ray F. Weiss, Doug Worthy, Debra Wunch, Yi Yin, Yukio Yoshida, Wenxin Zhang, Zhen Zhang, Yuanhong Zhao, Bo Zheng, Qing Zhu, Qiuan Zhu, and Qianlai Zhuang
Earth Syst. Sci. Data, 12, 1561–1623, https://doi.org/10.5194/essd-12-1561-2020, https://doi.org/10.5194/essd-12-1561-2020, 2020
Short summary
Short summary
Understanding and quantifying the global methane (CH4) budget is important for assessing realistic pathways to mitigate climate change. We have established a consortium of multidisciplinary scientists under the umbrella of the Global Carbon Project to synthesize and stimulate new research aimed at improving and regularly updating the global methane budget. This is the second version of the review dedicated to the decadal methane budget, integrating results of top-down and bottom-up estimates.
Simon Jones, Lucy Rowland, Peter Cox, Deborah Hemming, Andy Wiltshire, Karina Williams, Nicholas C. Parazoo, Junjie Liu, Antonio C. L. da Costa, Patrick Meir, Maurizio Mencuccini, and Anna B. Harper
Biogeosciences, 17, 3589–3612, https://doi.org/10.5194/bg-17-3589-2020, https://doi.org/10.5194/bg-17-3589-2020, 2020
Short summary
Short summary
Non-structural carbohydrates (NSCs) are an important set of molecules that help plants to grow and respire when photosynthesis is restricted by extreme climate events. In this paper we present a simple model of NSC storage and assess the effect that it has on simulations of vegetation at the ecosystem scale. Our model has the potential to significantly change predictions of plant behaviour in global vegetation models, which would have large implications for predictions of the future climate.
Gregory Duveiller, Federico Filipponi, Sophia Walther, Philipp Köhler, Christian Frankenberg, Luis Guanter, and Alessandro Cescatti
Earth Syst. Sci. Data, 12, 1101–1116, https://doi.org/10.5194/essd-12-1101-2020, https://doi.org/10.5194/essd-12-1101-2020, 2020
Short summary
Short summary
Sun-induced chlorophyll fluorescence is a valuable indicator of vegetation productivity, but our capacity to measure it from space using satellite remote techniques has been hampered by a lack of spatial detail. Based on prior knowledge of how ecosystems should respond to growing conditions in some modelling along with ancillary satellite observations, we provide here a new enhanced dataset with higher spatial resolution that better represents the spatial patterns of vegetation growth over land.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 17, 405–422, https://doi.org/10.5194/bg-17-405-2020, https://doi.org/10.5194/bg-17-405-2020, 2020
Short summary
Short summary
We present the highest resolution solar-induced chlorophyll fluorescence (SIF) dataset from satellite measurements, providing previously unobservable phenomena related to plant photosynthesis. We find a strong correspondence between TROPOMI SIF and AmeriFlux GPP. We then observe a double peak in the seasonality of California's photosynthesis, not seen by traditional vegetation indices (e.g., MODIS). This is further corroborated by EOF/PC analysis.
Siraput Jongaramrungruang, Christian Frankenberg, Georgios Matheou, Andrew K. Thorpe, David R. Thompson, Le Kuai, and Riley M. Duren
Atmos. Meas. Tech., 12, 6667–6681, https://doi.org/10.5194/amt-12-6667-2019, https://doi.org/10.5194/amt-12-6667-2019, 2019
Short summary
Short summary
This paper demonstrates the use of high-resolution 2-D plume imagery from airborne remote sensing retrievals to quantify methane point-source emissions. It shows significant improvements on the flux estimates without the need for direct wind speed measurements. This paves the way for enhanced flux estimates in future field campaign and space-based observations to better understand the magnitude and distribution of various point sources of methane.
Daniel H. Cusworth, Daniel J. Jacob, Daniel J. Varon, Christopher Chan Miller, Xiong Liu, Kelly Chance, Andrew K. Thorpe, Riley M. Duren, Charles E. Miller, David R. Thompson, Christian Frankenberg, Luis Guanter, and Cynthia A. Randles
Atmos. Meas. Tech., 12, 5655–5668, https://doi.org/10.5194/amt-12-5655-2019, https://doi.org/10.5194/amt-12-5655-2019, 2019
Short summary
Short summary
We examine the potential for global detection of methane plumes from individual point sources with the new generation of spaceborne imaging spectrometers scheduled for launch in 2019–2025. We perform methane retrievals on simulated scenes with varying surfaces and atmospheric methane concentrations. Our results suggest that imaging spectrometers in space could play a transformative role in the future for quantifying methane emissions from point sources on a global scale.
Ana Bastos, Philippe Ciais, Frédéric Chevallier, Christian Rödenbeck, Ashley P. Ballantyne, Fabienne Maignan, Yi Yin, Marcos Fernández-Martínez, Pierre Friedlingstein, Josep Peñuelas, Shilong L. Piao, Stephen Sitch, William K. Smith, Xuhui Wang, Zaichun Zhu, Vanessa Haverd, Etsushi Kato, Atul K. Jain, Sebastian Lienert, Danica Lombardozzi, Julia E. M. S. Nabel, Philippe Peylin, Benjamin Poulter, and Dan Zhu
Atmos. Chem. Phys., 19, 12361–12375, https://doi.org/10.5194/acp-19-12361-2019, https://doi.org/10.5194/acp-19-12361-2019, 2019
Short summary
Short summary
Here we show that land-surface models improved their ability to simulate the increase in the amplitude of seasonal CO2-cycle exchange (SCANBP) by ecosystems compared to estimates by two atmospheric inversions. We find a dominant role of vegetation growth over boreal Eurasia to the observed increase in SCANBP, strongly driven by CO2 fertilization, and an overall negative effect of temperature on SCANBP. Biases can be explained by the sensitivity of simulated microbial respiration to temperature.
Jocelyn E. Egan, David R. Bowling, and David A. Risk
Biogeosciences, 16, 3197–3205, https://doi.org/10.5194/bg-16-3197-2019, https://doi.org/10.5194/bg-16-3197-2019, 2019
Short summary
Short summary
Traditionally a mass-dependent correction is made when measuring the radiocarbon composition in organic samples. This correction has not been evaluated for the soil gas environment where gas transport processes are important. Here, we show using theory that this traditional correction is not appropriate for estimating the radiocarbon composition of soil biological production. We also propose a new solution that accounts for soil gas transport processes.
Ryan Bares, Logan Mitchell, Ben Fasoli, David R. Bowling, Douglas Catharine, Maria Garcia, Byron Eng, Jim Ehleringer, and John C. Lin
Earth Syst. Sci. Data, 11, 1291–1308, https://doi.org/10.5194/essd-11-1291-2019, https://doi.org/10.5194/essd-11-1291-2019, 2019
Short summary
Short summary
We overview two near-surface trace gas measurement networks with the aim of describing procedures, locations, and data structure with sufficient detail to serve as an in-depth method reference. Additionally, we developed a novel method for quantifying measurement uncertainty produced by these networks providing insight into appropriate applications of the data and differences in data collection methods. This uncertainty metric is broadly applicable to many trace gas and air quality datasets.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, Marko Scholze, Jeremy D. Silver, and Ying-Ping Wang
Biogeosciences, 16, 3069–3093, https://doi.org/10.5194/bg-16-3069-2019, https://doi.org/10.5194/bg-16-3069-2019, 2019
Short summary
Short summary
This study presents an estimate of global terrestrial photosynthesis. We make use of satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and estimate photosynthetic carbon uptake. This new framework incorporates nonlinear, process-based understanding of the link between fluorescence and photosynthesis, an advance on past approaches. This will aid in the utility of fluorescence to quantify terrestrial carbon cycle feedbacks.
Alexandra G. Konings, A. Anthony Bloom, Junjie Liu, Nicholas C. Parazoo, David S. Schimel, and Kevin W. Bowman
Biogeosciences, 16, 2269–2284, https://doi.org/10.5194/bg-16-2269-2019, https://doi.org/10.5194/bg-16-2269-2019, 2019
Short summary
Short summary
We estimate heterotrophic respiration (Rh) – the respiration from microbes in the soil – using satellite estimates of the net carbon flux and other quantities. Rh is an important carbon flux but is rarely studied by itself. Our method is the first to estimate how Rh varies in both space and time. The resulting new estimate of Rh is compared to the best currently available alternative, which is based on interpolating field measurements globally. The two estimates disagree and are both uncertain.
Debsunder Dutta, David S. Schimel, Ying Sun, Christiaan van der Tol, and Christian Frankenberg
Biogeosciences, 16, 77–103, https://doi.org/10.5194/bg-16-77-2019, https://doi.org/10.5194/bg-16-77-2019, 2019
Short summary
Short summary
Canopy structural and leaf photosynthesis parameterizations are often fixed over time in Earth system models and represent large sources of uncertainty in predictions of carbon and water fluxes. We develop a moving window nonlinear optimal parameter inversion framework using constraining flux and satellite reflectance observations. The results demonstrate the applicability of the approach for error reduction and capturing the seasonal variability of key ecosystem parameters.
Christopher W. O'Dell, Annmarie Eldering, Paul O. Wennberg, David Crisp, Michael R. Gunson, Brendan Fisher, Christian Frankenberg, Matthäus Kiel, Hannakaisa Lindqvist, Lukas Mandrake, Aronne Merrelli, Vijay Natraj, Robert R. Nelson, Gregory B. Osterman, Vivienne H. Payne, Thomas E. Taylor, Debra Wunch, Brian J. Drouin, Fabiano Oyafuso, Albert Chang, James McDuffie, Michael Smyth, David F. Baker, Sourish Basu, Frédéric Chevallier, Sean M. R. Crowell, Liang Feng, Paul I. Palmer, Mavendra Dubey, Omaira E. García, David W. T. Griffith, Frank Hase, Laura T. Iraci, Rigel Kivi, Isamu Morino, Justus Notholt, Hirofumi Ohyama, Christof Petri, Coleen M. Roehl, Mahesh K. Sha, Kimberly Strong, Ralf Sussmann, Yao Te, Osamu Uchino, and Voltaire A. Velazco
Atmos. Meas. Tech., 11, 6539–6576, https://doi.org/10.5194/amt-11-6539-2018, https://doi.org/10.5194/amt-11-6539-2018, 2018
Vladislav Bastrikov, Natasha MacBean, Cédric Bacour, Diego Santaren, Sylvain Kuppel, and Philippe Peylin
Geosci. Model Dev., 11, 4739–4754, https://doi.org/10.5194/gmd-11-4739-2018, https://doi.org/10.5194/gmd-11-4739-2018, 2018
Short summary
Short summary
In this study, we compare different methods for optimising parameters of the ORCHIDEE land surface model (LSM) using in situ observations. We use two minimisation methods - local gradient-based and global random search - applied either at each individual site or a group of sites characterised by one plant functional type. We demonstrate the advantages and challenges of different techniques and provide some advice on using it for the LSM parameters optimisation.
Umarporn Charusombat, Ayumi Fujisaki-Manome, Andrew D. Gronewold, Brent M. Lofgren, Eric J. Anderson, Peter D. Blanken, Christopher Spence, John D. Lenters, Chuliang Xiao, Lindsay E. Fitzpatrick, and Gregory Cutrell
Hydrol. Earth Syst. Sci., 22, 5559–5578, https://doi.org/10.5194/hess-22-5559-2018, https://doi.org/10.5194/hess-22-5559-2018, 2018
Short summary
Short summary
The authors evaluated several algorithms of heat loss and evaporation simulation by comparing with direct measurements at four offshore flux towers in the North American Great Lakes. The algorithms reproduced the seasonal cycle of heat loss and evaporation reasonably, but some algorithms significantly overestimated them during fall to early winter. This was due to false assumption of roughness length scales for temperature and humidity and was improved by employing a correct parameterization.
Zun Yin, Catherine Ottlé, Philippe Ciais, Matthieu Guimberteau, Xuhui Wang, Dan Zhu, Fabienne Maignan, Shushi Peng, Shilong Piao, Jan Polcher, Feng Zhou, Hyungjun Kim, and other China-Trend-Stream project members
Hydrol. Earth Syst. Sci., 22, 5463–5484, https://doi.org/10.5194/hess-22-5463-2018, https://doi.org/10.5194/hess-22-5463-2018, 2018
Short summary
Short summary
Simulations in China were performed in ORCHIDEE driven by different forcing datasets: GSWP3, PGF, CRU-NCEP, and WFDEI. Simulated soil moisture was compared to several datasets to evaluate the ability of ORCHIDEE in reproducing soil moisture dynamics. Results showed that ORCHIDEE soil moisture coincided well with other datasets in wet areas and in non-irrigated areas. It suggested that the ORCHIDEE-MICT was suitable for further hydrological studies in China.
Emilie Joetzjer, Fabienne Maignan, Jérôme Chave, Daniel Goll, Ben Poulter, Jonathan Barichivich, Isabelle Maréchaux, Sebastiaan Luyssaert, Matthieu Guimberteau, Kim Naudts, Damien Bonal, and Philippe Ciais
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-308, https://doi.org/10.5194/bg-2018-308, 2018
Revised manuscript not accepted
Short summary
Short summary
This study explores the relative contributions of tree demographic, canopy structure and hydraulic processes on the Amazonian carbon and water cycles using large-scale process-based model. Our results imply that explicit coupling of the water and carbon cycles improves the representation of biogeochemical cycles and their spatial variability. Representing the variation in the ecological functioning of Amazonia should be the next step to improve the performance and predictive ability of models.
Benjamin Fasoli, John C. Lin, David R. Bowling, Logan Mitchell, and Daniel Mendoza
Geosci. Model Dev., 11, 2813–2824, https://doi.org/10.5194/gmd-11-2813-2018, https://doi.org/10.5194/gmd-11-2813-2018, 2018
Short summary
Short summary
The Stochastic Time-Inverted Lagrangian Transport (STILT) model is used to determine the area upstream that influences the air arriving at a given location. We introduce a new framework that makes the STILT model faster and easier to deploy and improves results. We also show how the model can be applied to spatially complex measurement strategies using trace gas observations collected onboard a Salt Lake City, Utah, USA, light-rail train.
Chunxiang Ye, Xianliang Zhou, Dennis Pu, Jochen Stutz, James Festa, Max Spolaor, Catalina Tsai, Christopher Cantrell, Roy L. Mauldin III, Andrew Weinheimer, Rebecca S. Hornbrook, Eric C. Apel, Alex Guenther, Lisa Kaser, Bin Yuan, Thomas Karl, Julie Haggerty, Samuel Hall, Kirk Ullmann, James Smith, and John Ortega
Atmos. Chem. Phys., 18, 9107–9120, https://doi.org/10.5194/acp-18-9107-2018, https://doi.org/10.5194/acp-18-9107-2018, 2018
Short summary
Short summary
Substantial levels of HONO existed during the day throughout the troposphere over the southeastern US during NOMADSS 2013. Particulate nitrate photolysis appeared to be the major volume HONO source, while NOx was an important HONO precursor only in industrial and urban plumes. HONO was not a significant OH radical precursor in the rural troposphere away from the ground surface; however, its production from particulate nitrate photolysis was an important renoxification pathway.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, Marko Scholze, Jeremy D. Silver, and Ying-Ping Wang
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-270, https://doi.org/10.5194/bg-2018-270, 2018
Revised manuscript has not been submitted
Short summary
Short summary
This study presents a global estimate of land carbon uptake through photosynthesis. We make use satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and then use the optimized model to estimate photosynthetic carbon uptake. This provides a new tool that can combine measurements and observations in a systematic way and maximise the use of chlorophyll fluorescence to improve our understanding of the land carbon cycle.
Si-Wan Kim, Vijay Natraj, Seoyoung Lee, Hyeong-Ahn Kwon, Rokjin Park, Joost de Gouw, Gregory Frost, Jhoon Kim, Jochen Stutz, Michael Trainer, Catalina Tsai, and Carsten Warneke
Atmos. Chem. Phys., 18, 7639–7655, https://doi.org/10.5194/acp-18-7639-2018, https://doi.org/10.5194/acp-18-7639-2018, 2018
Short summary
Short summary
Formaldehyde (HCHO) is a hazardous air pollutant and is associated with tropospheric ozone production. HCHO has been monitored from space. In this study, to acquire high-quality satellite-based HCHO observations, we utilize fine-resolution atmospheric chemistry model results as an input to the computer code for satellite retrievals over the Los Angeles Basin. Our study indicates that the use of fine-resolution profile shapes helps to identify HCHO plumes from space.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, and Marko Scholze
Geosci. Model Dev., 11, 1517–1536, https://doi.org/10.5194/gmd-11-1517-2018, https://doi.org/10.5194/gmd-11-1517-2018, 2018
Short summary
Short summary
It is difficult to estimate how much CO2 plants absorb via photosynthesis and even more difficult to model this for the whole globe. Here, we present a framework to combine a new satellite measurement "solar-induced chlorophyll fluorescence" with a global photosynthesis model. We then quantify how this new measurement constrains model uncertainties and find highly effective constraint. These results pave a novel pathway for improving estimates and modelling abilities of photosynthesis globally.
Catalina Tsai, Max Spolaor, Santo Fedele Colosimo, Olga Pikelnaya, Ross Cheung, Eric Williams, Jessica B. Gilman, Brian M. Lerner, Robert J. Zamora, Carsten Warneke, James M. Roberts, Ravan Ahmadov, Joost de Gouw, Timothy Bates, Patricia K. Quinn, and Jochen Stutz
Atmos. Chem. Phys., 18, 1977–1996, https://doi.org/10.5194/acp-18-1977-2018, https://doi.org/10.5194/acp-18-1977-2018, 2018
Short summary
Short summary
Nitrous acid (HONO) photolysis is an important source of hydroxyl radicals (OH). Vertical HONO fluxes, observed in the snow-free, wintertime Uintah Basin, Utah, USA, show that chemical formation of HONO on the ground closes the HONO budget. Under high NOx conditions, HONO formation is most likely due to photo-enhanced conversion of NO2 on the ground. Under moderate to low NO2 conditions, photolysis of HNO3 on the ground seems to be the most likely source of HONO.
Matthieu Guimberteau, Dan Zhu, Fabienne Maignan, Ye Huang, Chao Yue, Sarah Dantec-Nédélec, Catherine Ottlé, Albert Jornet-Puig, Ana Bastos, Pierre Laurent, Daniel Goll, Simon Bowring, Jinfeng Chang, Bertrand Guenet, Marwa Tifafi, Shushi Peng, Gerhard Krinner, Agnès Ducharne, Fuxing Wang, Tao Wang, Xuhui Wang, Yilong Wang, Zun Yin, Ronny Lauerwald, Emilie Joetzjer, Chunjing Qiu, Hyungjun Kim, and Philippe Ciais
Geosci. Model Dev., 11, 121–163, https://doi.org/10.5194/gmd-11-121-2018, https://doi.org/10.5194/gmd-11-121-2018, 2018
Short summary
Short summary
Improved projections of future Arctic and boreal ecosystem transformation require improved land surface models that integrate processes specific to these cold biomes. To this end, this study lays out relevant new parameterizations in the ORCHIDEE-MICT land surface model. These describe the interactions between soil carbon, soil temperature and hydrology, and their resulting feedbacks on water and CO2 fluxes, in addition to a recently developed fire module.
Nicholas C. Parazoo, Charles D. Koven, David M. Lawrence, Vladimir Romanovsky, and Charles E. Miller
The Cryosphere, 12, 123–144, https://doi.org/10.5194/tc-12-123-2018, https://doi.org/10.5194/tc-12-123-2018, 2018
Short summary
Short summary
Carbon models suggest the permafrost carbon feedback (soil carbon emissions from permafrost thaw) acts as a slow, unobservable leak. We investigate if permafrost temperature provides an observable signal to detect feedbacks. We find a slow carbon feedback in warm sub-Arctic permafrost soils, but potentially rapid feedback in cold Arctic permafrost. This is surprising since the cold permafrost region is dominated by tundra and underlain by deep, cold permafrost thought impervious to such changes.
Tilman Hüneke, Oliver-Alex Aderhold, Jannik Bounin, Marcel Dorf, Eric Gentry, Katja Grossmann, Jens-Uwe Grooß, Peter Hoor, Patrick Jöckel, Mareike Kenntner, Marvin Knapp, Matthias Knecht, Dominique Lörks, Sabrina Ludmann, Sigrun Matthes, Rasmus Raecke, Marcel Reichert, Jannis Weimar, Bodo Werner, Andreas Zahn, Helmut Ziereis, and Klaus Pfeilsticker
Atmos. Meas. Tech., 10, 4209–4234, https://doi.org/10.5194/amt-10-4209-2017, https://doi.org/10.5194/amt-10-4209-2017, 2017
Short summary
Short summary
This paper describes a novel instrument for the aircraft-borne remote sensing of trace gases and liquid and solid water. Until recently, such measurements could only be evaluated under clear-sky conditions. We present a characterization and error assessment of the novel "scaling method", which allows for the retrieval of absolute trace gas concentrations under all sky conditions, significantly expanding the applicability of such measurements to study atmospheric photochemistry.
Andrew K. Thorpe, Christian Frankenberg, David R. Thompson, Riley M. Duren, Andrew D. Aubrey, Brian D. Bue, Robert O. Green, Konstantin Gerilowski, Thomas Krings, Jakob Borchardt, Eric A. Kort, Colm Sweeney, Stephen Conley, Dar A. Roberts, and Philip E. Dennison
Atmos. Meas. Tech., 10, 3833–3850, https://doi.org/10.5194/amt-10-3833-2017, https://doi.org/10.5194/amt-10-3833-2017, 2017
Short summary
Short summary
At local scales emissions of methane (CH4) and carbon dioxide (CO2) are highly uncertain. The AVIRIS-NG imaging spectrometer maps large regions and generates high-spatial-resolution CH4 and CO2 concentration maps from anthropogenic and natural sources. Examples include CH4 from a processing plant, tank, pipeline leak, seep, mine vent shafts, and CO2 from power plants. This demonstrates a greenhouse gas monitoring capability that targets the two dominant anthropogenic climate-forcing agents.
Daniel S. Goll, Nicolas Vuichard, Fabienne Maignan, Albert Jornet-Puig, Jordi Sardans, Aurelie Violette, Shushi Peng, Yan Sun, Marko Kvakic, Matthieu Guimberteau, Bertrand Guenet, Soenke Zaehle, Josep Penuelas, Ivan Janssens, and Philippe Ciais
Geosci. Model Dev., 10, 3745–3770, https://doi.org/10.5194/gmd-10-3745-2017, https://doi.org/10.5194/gmd-10-3745-2017, 2017
Short summary
Short summary
We describe a representation of the terrestrial phosphorus cycle for the ORCHIDEE land surface model. The model is able to reproduce the observed shift from nitrogen to phosphorus limited net primary productivity along a soil formation chronosequence in Hawaii, as well as the contrasting responses of net primary productivity to nutrient addition. However, the simulated nutrient use efficiencies are lower, as observed primarily due to biases in the nutrient content and turnover of woody biomass.
Henrique F. Duarte, Brett M. Raczka, Daniel M. Ricciuto, John C. Lin, Charles D. Koven, Peter E. Thornton, David R. Bowling, Chun-Ta Lai, Kenneth J. Bible, and James R. Ehleringer
Biogeosciences, 14, 4315–4340, https://doi.org/10.5194/bg-14-4315-2017, https://doi.org/10.5194/bg-14-4315-2017, 2017
Short summary
Short summary
We evaluate the Community Land Model (CLM4.5) against observations at an old-growth coniferous forest site that is subjected to water stress each summer. We found that, after calibration, CLM was able to reasonably simulate the observed fluxes of energy and carbon, carbon stocks, carbon isotope ratios, and ecosystem response to water stress. This study demonstrates that carbon isotopes can expose structural weaknesses in CLM and provide a key constraint that may guide future model development.
Francesc Montané, Andrew M. Fox, Avelino F. Arellano, Natasha MacBean, M. Ross Alexander, Alex Dye, Daniel A. Bishop, Valerie Trouet, Flurin Babst, Amy E. Hessl, Neil Pederson, Peter D. Blanken, Gil Bohrer, Christopher M. Gough, Marcy E. Litvak, Kimberly A. Novick, Richard P. Phillips, Jeffrey D. Wood, and David J. P. Moore
Geosci. Model Dev., 10, 3499–3517, https://doi.org/10.5194/gmd-10-3499-2017, https://doi.org/10.5194/gmd-10-3499-2017, 2017
Short summary
Short summary
How carbon is allocated to different plant tissues (leaves, stem, and roots) determines carbon residence time and thus remains a central challenge for understanding the global carbon cycle. In this paper, we compared standard and novel carbon allocation schemes in CLM4.5 and evaluated them using eddy covariance wood and leaf biomass. The dynamic scheme based on work by Litton improved model performance, but this was dependent on model assumptions about woody turnover.
Marielle Saunois, Philippe Bousquet, Ben Poulter, Anna Peregon, Philippe Ciais, Josep G. Canadell, Edward J. Dlugokencky, Giuseppe Etiope, David Bastviken, Sander Houweling, Greet Janssens-Maenhout, Francesco N. Tubiello, Simona Castaldi, Robert B. Jackson, Mihai Alexe, Vivek K. Arora, David J. Beerling, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Lori Bruhwiler, Cyril Crevoisier, Patrick Crill, Kristofer Covey, Christian Frankenberg, Nicola Gedney, Lena Höglund-Isaksson, Misa Ishizawa, Akihiko Ito, Fortunat Joos, Heon-Sook Kim, Thomas Kleinen, Paul Krummel, Jean-François Lamarque, Ray Langenfelds, Robin Locatelli, Toshinobu Machida, Shamil Maksyutov, Joe R. Melton, Isamu Morino, Vaishali Naik, Simon O'Doherty, Frans-Jan W. Parmentier, Prabir K. Patra, Changhui Peng, Shushi Peng, Glen P. Peters, Isabelle Pison, Ronald Prinn, Michel Ramonet, William J. Riley, Makoto Saito, Monia Santini, Ronny Schroeder, Isobel J. Simpson, Renato Spahni, Atsushi Takizawa, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Nicolas Viovy, Apostolos Voulgarakis, Ray Weiss, David J. Wilton, Andy Wiltshire, Doug Worthy, Debra Wunch, Xiyan Xu, Yukio Yoshida, Bowen Zhang, Zhen Zhang, and Qiuan Zhu
Atmos. Chem. Phys., 17, 11135–11161, https://doi.org/10.5194/acp-17-11135-2017, https://doi.org/10.5194/acp-17-11135-2017, 2017
Short summary
Short summary
Following the Global Methane Budget 2000–2012 published in Saunois et al. (2016), we use the same dataset of bottom-up and top-down approaches to discuss the variations in methane emissions over the period 2000–2012. The changes in emissions are discussed both in terms of trends and quasi-decadal changes. The ensemble gathered here allows us to synthesise the robust changes in terms of regional and sectorial contributions to the increasing methane emissions.
John R. Worden, Gary Doran, Susan Kulawik, Annmarie Eldering, David Crisp, Christian Frankenberg, Chris O'Dell, and Kevin Bowman
Atmos. Meas. Tech., 10, 2759–2771, https://doi.org/10.5194/amt-10-2759-2017, https://doi.org/10.5194/amt-10-2759-2017, 2017
Short summary
Short summary
This paper evaluates the uncertainties of the total column carbon dioxide (XCO2) measurements from the NASA OCO-2 instrument by comparing observed variations in small geographical regions to the calculated uncertainties of the data within this region. In general we find that the reported XCO2 precision is related to that expected from the XCO2 radiance noise. However, the reported accuracy is at least smaller than the actual accuracy by a factor of 2–4.
Michael Buchwitz, Oliver Schneising, Maximilian Reuter, Jens Heymann, Sven Krautwurst, Heinrich Bovensmann, John P. Burrows, Hartmut Boesch, Robert J. Parker, Peter Somkuti, Rob G. Detmers, Otto P. Hasekamp, Ilse Aben, André Butz, Christian Frankenberg, and Alexander J. Turner
Atmos. Chem. Phys., 17, 5751–5774, https://doi.org/10.5194/acp-17-5751-2017, https://doi.org/10.5194/acp-17-5751-2017, 2017
Short summary
Short summary
Methane is an important greenhouse gas and increasing atmospheric concentrations result in global warming. We present a simple method to derive annual methane emission estimates of methane hotspot areas from satellite data. We present results for four source areas. We found that our estimates are in good agreement with other studies/data sets for the Four Corners region in the USA and for Azerbaijan but we also found higher emissions for parts of California and Turkmenistan.
Jochen Stutz, Bodo Werner, Max Spolaor, Lisa Scalone, James Festa, Catalina Tsai, Ross Cheung, Santo F. Colosimo, Ugo Tricoli, Rasmus Raecke, Ryan Hossaini, Martyn P. Chipperfield, Wuhu Feng, Ru-Shan Gao, Eric J. Hintsa, James W. Elkins, Fred L. Moore, Bruce Daube, Jasna Pittman, Steven Wofsy, and Klaus Pfeilsticker
Atmos. Meas. Tech., 10, 1017–1042, https://doi.org/10.5194/amt-10-1017-2017, https://doi.org/10.5194/amt-10-1017-2017, 2017
Short summary
Short summary
A new limb-scanning Differential Optical Absorption Spectroscopy (DOAS) instrument was developed for NASA’s Global Hawk unmanned aerial system during the Airborne Tropical TRopopause EXperiment to study trace gases in the tropical tropopause layer. A new technique that uses in situ and DOAS O3 observations together with radiative transfer calculations allows the retrieval of mixing ratios from the slant column densities of BrO and NO2 at high accuracies of 0.5 ppt and 15 ppt, respectively.
Kang Sun, Xiong Liu, Caroline R. Nowlan, Zhaonan Cai, Kelly Chance, Christian Frankenberg, Richard A. M. Lee, Randy Pollock, Robert Rosenberg, and David Crisp
Atmos. Meas. Tech., 10, 939–953, https://doi.org/10.5194/amt-10-939-2017, https://doi.org/10.5194/amt-10-939-2017, 2017
Short summary
Short summary
Accurately characterizing the instrument line shape (ILS) of the Orbiting Carbon Observatory-2 (OCO-2) is challenging and highly important due to its high spectral resolution and requirement for retrieval accuracy. Measured ILS during preflight experiments has been used in the OCO-2 CO2 retrieval. This study derives the on-orbit ILS of OCO-2 using its solar measurements and answers the questions whether on-orbit ILS has changed compared to preflight and whether it varies during the mission.
Annmarie Eldering, Chris W. O'Dell, Paul O. Wennberg, David Crisp, Michael R. Gunson, Camille Viatte, Charles Avis, Amy Braverman, Rebecca Castano, Albert Chang, Lars Chapsky, Cecilia Cheng, Brian Connor, Lan Dang, Gary Doran, Brendan Fisher, Christian Frankenberg, Dejian Fu, Robert Granat, Jonathan Hobbs, Richard A. M. Lee, Lukas Mandrake, James McDuffie, Charles E. Miller, Vicky Myers, Vijay Natraj, Denis O'Brien, Gregory B. Osterman, Fabiano Oyafuso, Vivienne H. Payne, Harold R. Pollock, Igor Polonsky, Coleen M. Roehl, Robert Rosenberg, Florian Schwandner, Mike Smyth, Vivian Tang, Thomas E. Taylor, Cathy To, Debra Wunch, and Jan Yoshimizu
Atmos. Meas. Tech., 10, 549–563, https://doi.org/10.5194/amt-10-549-2017, https://doi.org/10.5194/amt-10-549-2017, 2017
Short summary
Short summary
This paper describes the measurements of atmospheric carbon dioxide collected in the first 18 months of the satellite mission known as the Orbiting Carbon Observatory-2 (OCO-2). The paper shows maps of the carbon dioxide data, data density, and other data fields that illustrate the data quality. This mission has collected a more precise, more dense dataset of carbon dioxide then we have ever had previously.
Nga Lee Ng, Steven S. Brown, Alexander T. Archibald, Elliot Atlas, Ronald C. Cohen, John N. Crowley, Douglas A. Day, Neil M. Donahue, Juliane L. Fry, Hendrik Fuchs, Robert J. Griffin, Marcelo I. Guzman, Hartmut Herrmann, Alma Hodzic, Yoshiteru Iinuma, José L. Jimenez, Astrid Kiendler-Scharr, Ben H. Lee, Deborah J. Luecken, Jingqiu Mao, Robert McLaren, Anke Mutzel, Hans D. Osthoff, Bin Ouyang, Benedicte Picquet-Varrault, Ulrich Platt, Havala O. T. Pye, Yinon Rudich, Rebecca H. Schwantes, Manabu Shiraiwa, Jochen Stutz, Joel A. Thornton, Andreas Tilgner, Brent J. Williams, and Rahul A. Zaveri
Atmos. Chem. Phys., 17, 2103–2162, https://doi.org/10.5194/acp-17-2103-2017, https://doi.org/10.5194/acp-17-2103-2017, 2017
Short summary
Short summary
Oxidation of biogenic volatile organic compounds by NO3 is an important interaction between anthropogenic
and natural emissions. This review results from a June 2015 workshop and includes the recent literature
on kinetics, mechanisms, organic aerosol yields, and heterogeneous chemistry; advances in analytical
instrumentation; the current state NO3-BVOC chemistry in atmospheric models; and critical needs for
future research in modeling, field observations, and laboratory studies.
Bodo Werner, Jochen Stutz, Max Spolaor, Lisa Scalone, Rasmus Raecke, James Festa, Santo Fedele Colosimo, Ross Cheung, Catalina Tsai, Ryan Hossaini, Martyn P. Chipperfield, Giorgio S. Taverna, Wuhu Feng, James W. Elkins, David W. Fahey, Ru-Shan Gao, Erik J. Hintsa, Troy D. Thornberry, Free Lee Moore, Maria A. Navarro, Elliot Atlas, Bruce C. Daube, Jasna Pittman, Steve Wofsy, and Klaus Pfeilsticker
Atmos. Chem. Phys., 17, 1161–1186, https://doi.org/10.5194/acp-17-1161-2017, https://doi.org/10.5194/acp-17-1161-2017, 2017
Short summary
Short summary
The paper reports on inorganic and organic bromine measured in the tropical tropopause layer (TTL) over the eastern Pacific in early 2013. Bryinorg is found to increase from a mean of 2.63 ± 1.04 ppt for θ in the range of 350–360 K to 5.11 ± 1.57 ppt for θ=390 ± 400 K, whereas in the subtropical lower stratosphere, it reaches 7.66 ± 2.95 ppt for θ in the range of 390–400 K. Within the TTL, total bromine is found to range from 20.3 ppt to 22.3 ppt.
Francois-Marie Breon and Fabienne Maignan
Earth Syst. Sci. Data, 9, 31–45, https://doi.org/10.5194/essd-9-31-2017, https://doi.org/10.5194/essd-9-31-2017, 2017
Short summary
Short summary
We have used a large database of multidirectional land surface reflectance measured from space, including polarization properties, to build a database of representative BRDFs and BPDFs. This database can be used to assess the variability in land surface reflectances, in particular their directional and polarization signatures, and to evaluate models. We have also built an interactive tool for an easy analysis of the database contents.
David Crisp, Harold R. Pollock, Robert Rosenberg, Lars Chapsky, Richard A. M. Lee, Fabiano A. Oyafuso, Christian Frankenberg, Christopher W. O'Dell, Carol J. Bruegge, Gary B. Doran, Annmarie Eldering, Brendan M. Fisher, Dejian Fu, Michael R. Gunson, Lukas Mandrake, Gregory B. Osterman, Florian M. Schwandner, Kang Sun, Tommy E. Taylor, Paul O. Wennberg, and Debra Wunch
Atmos. Meas. Tech., 10, 59–81, https://doi.org/10.5194/amt-10-59-2017, https://doi.org/10.5194/amt-10-59-2017, 2017
Short summary
Short summary
The Orbiting Carbon Observatory-2 carries and points a three-channel imaging grating spectrometer designed to collect high-resolution spectra of reflected sunlight within the molecular oxygen A-band at 0.765 microns and the carbon dioxide bands at 1.61 and 2.06 microns. Here, we describe the OCO-2 instrument, its data products, and its performance during its first 18 months in orbit.
Marielle Saunois, Philippe Bousquet, Ben Poulter, Anna Peregon, Philippe Ciais, Josep G. Canadell, Edward J. Dlugokencky, Giuseppe Etiope, David Bastviken, Sander Houweling, Greet Janssens-Maenhout, Francesco N. Tubiello, Simona Castaldi, Robert B. Jackson, Mihai Alexe, Vivek K. Arora, David J. Beerling, Peter Bergamaschi, Donald R. Blake, Gordon Brailsford, Victor Brovkin, Lori Bruhwiler, Cyril Crevoisier, Patrick Crill, Kristofer Covey, Charles Curry, Christian Frankenberg, Nicola Gedney, Lena Höglund-Isaksson, Misa Ishizawa, Akihiko Ito, Fortunat Joos, Heon-Sook Kim, Thomas Kleinen, Paul Krummel, Jean-François Lamarque, Ray Langenfelds, Robin Locatelli, Toshinobu Machida, Shamil Maksyutov, Kyle C. McDonald, Julia Marshall, Joe R. Melton, Isamu Morino, Vaishali Naik, Simon O'Doherty, Frans-Jan W. Parmentier, Prabir K. Patra, Changhui Peng, Shushi Peng, Glen P. Peters, Isabelle Pison, Catherine Prigent, Ronald Prinn, Michel Ramonet, William J. Riley, Makoto Saito, Monia Santini, Ronny Schroeder, Isobel J. Simpson, Renato Spahni, Paul Steele, Atsushi Takizawa, Brett F. Thornton, Hanqin Tian, Yasunori Tohjima, Nicolas Viovy, Apostolos Voulgarakis, Michiel van Weele, Guido R. van der Werf, Ray Weiss, Christine Wiedinmyer, David J. Wilton, Andy Wiltshire, Doug Worthy, Debra Wunch, Xiyan Xu, Yukio Yoshida, Bowen Zhang, Zhen Zhang, and Qiuan Zhu
Earth Syst. Sci. Data, 8, 697–751, https://doi.org/10.5194/essd-8-697-2016, https://doi.org/10.5194/essd-8-697-2016, 2016
Short summary
Short summary
An accurate assessment of the methane budget is important to understand the atmospheric methane concentrations and trends and to provide realistic pathways for climate change mitigation. The various and diffuse sources of methane as well and its oxidation by a very short lifetime radical challenge this assessment. We quantify the methane sources and sinks as well as their uncertainties based on both bottom-up and top-down approaches provided by a broad international scientific community.
Daniel J. Jacob, Alexander J. Turner, Joannes D. Maasakkers, Jianxiong Sheng, Kang Sun, Xiong Liu, Kelly Chance, Ilse Aben, Jason McKeever, and Christian Frankenberg
Atmos. Chem. Phys., 16, 14371–14396, https://doi.org/10.5194/acp-16-14371-2016, https://doi.org/10.5194/acp-16-14371-2016, 2016
Short summary
Short summary
Methane is a greenhouse gas emitted by a range of natural and anthropogenic sources. Atmospheric methane has been measured continuously from space since 2003, and new instruments are planned to launch in the near future that will greatly expand the capabilities of space-based observations. We review the value of current, future, and proposed satellite observations to better quantify methane emissions from the global scale down to the scale of point sources.
Brian Connor, Hartmut Bösch, James McDuffie, Tommy Taylor, Dejian Fu, Christian Frankenberg, Chris O'Dell, Vivienne H. Payne, Michael Gunson, Randy Pollock, Jonathan Hobbs, Fabiano Oyafuso, and Yibo Jiang
Atmos. Meas. Tech., 9, 5227–5238, https://doi.org/10.5194/amt-9-5227-2016, https://doi.org/10.5194/amt-9-5227-2016, 2016
Short summary
Short summary
We present an analysis of uncertainties in global measurements of the column-averaged dry-air mole fraction of CO2 (XCO2) by the satellite OCO-2. The analysis is based on our best estimates for uncertainties in the OCO-2 operational algorithm and its inputs. From these results we estimate the "variable error", which differs between soundings, to infer the error in the difference of XCO2 between any two soundings. Variable errors are usually < 1 ppm over ocean and ~ 0.5–2 ppm over land.
Zeli Tan, Qianlai Zhuang, Daven K. Henze, Christian Frankenberg, Ed Dlugokencky, Colm Sweeney, Alexander J. Turner, Motoki Sasakawa, and Toshinobu Machida
Atmos. Chem. Phys., 16, 12649–12666, https://doi.org/10.5194/acp-16-12649-2016, https://doi.org/10.5194/acp-16-12649-2016, 2016
Short summary
Short summary
Methane emissions from the pan-Arctic could be important in understanding the global carbon cycle but are still poorly constrained to date. This study demonstrated that satellite retrievals can be used to reduce the uncertainty of the estimates of these emissions. We also provided additional evidence for the existence of large methane emissions from pan-Arctic lakes in the Siberian yedoma permafrost region. We found that biogeochemical models should be improved for better estimates.
Sean P. Burns, Gordon D. Maclean, Peter D. Blanken, Steven P. Oncley, Steven R. Semmer, and Russell K. Monson
Geosci. Instrum. Method. Data Syst., 5, 451–471, https://doi.org/10.5194/gi-5-451-2016, https://doi.org/10.5194/gi-5-451-2016, 2016
Short summary
Short summary
The hardware and software used to collect eddy-covariance ecosystem
fluxes of carbon dioxide, heat, and water vapor at a high-elevation
subalpine forest site over 17 years are described. Over time,
software/hardware improvements have increased the system robustness,
leading to a successful 10 Hz data-collection rate of better than 99.98 %. We also provide philosophical concepts that shaped our data system design and are applicable to many different types of environmental data collection.
Tomás Sherwen, Johan A. Schmidt, Mat J. Evans, Lucy J. Carpenter, Katja Großmann, Sebastian D. Eastham, Daniel J. Jacob, Barbara Dix, Theodore K. Koenig, Roman Sinreich, Ivan Ortega, Rainer Volkamer, Alfonso Saiz-Lopez, Cristina Prados-Roman, Anoop S. Mahajan, and Carlos Ordóñez
Atmos. Chem. Phys., 16, 12239–12271, https://doi.org/10.5194/acp-16-12239-2016, https://doi.org/10.5194/acp-16-12239-2016, 2016
Short summary
Short summary
We present a simulation of tropospheric Cl, Br, I chemistry within the GEOS-Chem CTM. We find a decrease in tropospheric ozone burden of 18.6 % and a 8.2 % decrease in global mean OH concentrations. Cl oxidation of some VOCs range from 15 to 27 % of the total loss. Bromine plays a small role in oxidising oVOCs. Surface ozone, ozone sondes, and methane lifetime are in general improved by the inclusion of halogens. We argue that simulated bromine and chlorine represent a lower limit.
Philippe Peylin, Cédric Bacour, Natasha MacBean, Sébastien Leonard, Peter Rayner, Sylvain Kuppel, Ernest Koffi, Abdou Kane, Fabienne Maignan, Frédéric Chevallier, Philippe Ciais, and Pascal Prunet
Geosci. Model Dev., 9, 3321–3346, https://doi.org/10.5194/gmd-9-3321-2016, https://doi.org/10.5194/gmd-9-3321-2016, 2016
Short summary
Short summary
The study describes a carbon cycle data assimilation system that uses satellite observations of vegetation activity, net ecosystem exchange of carbon and water at many sites and atmospheric CO2 concentrations, in order to optimize the parameters of the ORCHIDEE land surface model. The optimized model is able to fit all three data streams leading to a land carbon uptake similar to independent estimates, which opens new perspectives for better prediction of the land carbon balance.
Brett Raczka, Henrique F. Duarte, Charles D. Koven, Daniel Ricciuto, Peter E. Thornton, John C. Lin, and David R. Bowling
Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, https://doi.org/10.5194/bg-13-5183-2016, 2016
Short summary
Short summary
We use carbon isotopes of CO2 to improve the performance of a land surface model, a component with earth system climate models. We found that isotope observations can provide important information related to the exchange of carbon and water from vegetation driven by environmental stress from low atmospheric moisture and nitrogen limitation. It follows that isotopes have a unique potential to improve model performance and provide insight into land surface model development.
Remco A. Scheepmaker, Joost aan de Brugh, Haili Hu, Tobias Borsdorff, Christian Frankenberg, Camille Risi, Otto Hasekamp, Ilse Aben, and Jochen Landgraf
Atmos. Meas. Tech., 9, 3921–3937, https://doi.org/10.5194/amt-9-3921-2016, https://doi.org/10.5194/amt-9-3921-2016, 2016
Short summary
Short summary
We have developed an algorithm to measure HDO (heavy water) in the atmosphere using the TROPOMI satellite instrument, scheduled for launch in 2016. Giving an insight in the history of water vapour, these measurements will help to better understand the water cycle and its role in climate change. We use realistic measurement simulations to describe the performance of the algorithm, and show that TROPOMI will greatly improve and extend the HDO datasets from the previous SCIAMACHY and GOSAT missions.
Christian Frankenberg, Susan S. Kulawik, Steven C. Wofsy, Frédéric Chevallier, Bruce Daube, Eric A. Kort, Christopher O'Dell, Edward T. Olsen, and Gregory Osterman
Atmos. Chem. Phys., 16, 7867–7878, https://doi.org/10.5194/acp-16-7867-2016, https://doi.org/10.5194/acp-16-7867-2016, 2016
Short summary
Short summary
We use observations from the HIAPER Pole-to-Pole Observations (HIPPO) flights from January 2009 through September 2011 to validate CO2 measurements from satellites (GOSAT, TES, AIRS) and atmospheric inversion models (CarbonTracker CT2013B, MACC v13r1).
Glynn C. Hulley, Riley M. Duren, Francesca M. Hopkins, Simon J. Hook, Nick Vance, Pierre Guillevic, William R. Johnson, Bjorn T. Eng, Jonathan M. Mihaly, Veljko M. Jovanovic, Seth L. Chazanoff, Zak K. Staniszewski, Le Kuai, John Worden, Christian Frankenberg, Gerardo Rivera, Andrew D. Aubrey, Charles E. Miller, Nabin K. Malakar, Juan M. Sánchez Tomás, and Kendall T. Holmes
Atmos. Meas. Tech., 9, 2393–2408, https://doi.org/10.5194/amt-9-2393-2016, https://doi.org/10.5194/amt-9-2393-2016, 2016
Short summary
Short summary
Using data from a new airborne Hyperspectral Thermal Emission Spectrometer (HyTES) instrument, we present a technique for the detection and wide-area mapping of emission plumes of methane and other atmospheric trace gas species over challenging and diverse environmental conditions with high spatial resolution, that permits direct attribution to sources in complex environments.
Santo Fedele Colosimo, Vijay Natraj, Stanley P. Sander, and Jochen Stutz
Atmos. Meas. Tech., 9, 1889–1905, https://doi.org/10.5194/amt-9-1889-2016, https://doi.org/10.5194/amt-9-1889-2016, 2016
Short summary
Short summary
Vertical aerosol extinction profile retrievals based on space-borne oxygen A-band observations benefit from high spectral resolution measurements. Radiative transfer calculations show that under most atmospheric conditions the information content of the retrievals increases with spectral resolution, despite a decreasing signal-to-noise ratio. The retrieval of lower tropospheric aerosol extinction over high albedo surfaces and of lofted biomass burning plumes becomes thus possible.
Stefan Metzger, George Burba, Sean P. Burns, Peter D. Blanken, Jiahong Li, Hongyan Luo, and Rommel C. Zulueta
Atmos. Meas. Tech., 9, 1341–1359, https://doi.org/10.5194/amt-9-1341-2016, https://doi.org/10.5194/amt-9-1341-2016, 2016
Short summary
Short summary
Enclosed infrared gas analyzers utilize a gas sampling system, which can substantially increase spectral corrections for eddy covariance applications. Here, we show that a requirements-based design can reduce high-frequency attenuation for H2O by ≈ 3/4, with the remaining flux correction not exceeding 3 %. The resulting gas sampling system can be used across a wide range of ecoclimates and site layouts, and enables more automated and comparable eddy covariance data processing across sites.
Thomas E. Taylor, Christopher W. O'Dell, Christian Frankenberg, Philip T. Partain, Heather Q. Cronk, Andrey Savtchenko, Robert R. Nelson, Emily J. Rosenthal, Albert Y. Chang, Brenden Fisher, Gregory B. Osterman, Randy H. Pollock, David Crisp, Annmarie Eldering, and Michael R. Gunson
Atmos. Meas. Tech., 9, 973–989, https://doi.org/10.5194/amt-9-973-2016, https://doi.org/10.5194/amt-9-973-2016, 2016
Short summary
Short summary
NASA's Orbiting Carbon Observatory-2 (OCO-2) is providing approximately 1 million soundings per day of the total column of carbon dioxide (XCO2). The retrieval of XCO2 can only be performed for soundings sufficiently free of cloud and aerosol. This work highlights comparisons of OCO-2 cloud screening algorithms to the MODIS cloud mask product. We find agreement approximately 85 % of the time with some significant spatial and small seasonal dependencies.
Susan Kulawik, Debra Wunch, Christopher O'Dell, Christian Frankenberg, Maximilian Reuter, Tomohiro Oda, Frederic Chevallier, Vanessa Sherlock, Michael Buchwitz, Greg Osterman, Charles E. Miller, Paul O. Wennberg, David Griffith, Isamu Morino, Manvendra K. Dubey, Nicholas M. Deutscher, Justus Notholt, Frank Hase, Thorsten Warneke, Ralf Sussmann, John Robinson, Kimberly Strong, Matthias Schneider, Martine De Mazière, Kei Shiomi, Dietrich G. Feist, Laura T. Iraci, and Joyce Wolf
Atmos. Meas. Tech., 9, 683–709, https://doi.org/10.5194/amt-9-683-2016, https://doi.org/10.5194/amt-9-683-2016, 2016
Short summary
Short summary
To accurately estimate source and sink locations of carbon dioxide, systematic errors in satellite measurements and models must be characterized. This paper examines two satellite data sets (GOSAT, launched 2009, and SCIAMACHY, launched 2002), and two models (CarbonTracker and MACC) vs. the TCCON CO2 validation data set. We assess biases and errors by season and latitude, satellite performance under averaging, and diurnal variability. Our findings are useful for assimilation of satellite data.
Yuting Wang, Nicholas M. Deutscher, Mathias Palm, Thorsten Warneke, Justus Notholt, Ian Baker, Joe Berry, Parvadha Suntharalingam, Nicholas Jones, Emmanuel Mahieu, Bernard Lejeune, James Hannigan, Stephanie Conway, Joseph Mendonca, Kimberly Strong, J. Elliott Campbell, Adam Wolf, and Stefanie Kremser
Atmos. Chem. Phys., 16, 2123–2138, https://doi.org/10.5194/acp-16-2123-2016, https://doi.org/10.5194/acp-16-2123-2016, 2016
Short summary
Short summary
OCS could provide an additional constraint on the carbon cycle. The FTIR networks have existed for more than 20 years. For the first time, we used FTIR measurements of OCS and CO2 to study their relationship. We put the coupled CO2 and OCS land fluxes from the Simple Biosphere Model (SiB) into a transport model, and compared the simulations to the measurements. Looking at OCS and CO2 together inspires some new thoughts in how the biospheric models reproduce the carbon cycle in the real world.
K.-E. Min, R. A. Washenfelder, W. P. Dubé, A. O. Langford, P. M. Edwards, K. J. Zarzana, J. Stutz, K. Lu, F. Rohrer, Y. Zhang, and S. S. Brown
Atmos. Meas. Tech., 9, 423–440, https://doi.org/10.5194/amt-9-423-2016, https://doi.org/10.5194/amt-9-423-2016, 2016
Short summary
Short summary
We have developed a two-channel broadband cavity enhanced absorption spectrometer for field measurements of glyoxal, methylglyoxal, nitrous acid, nitrogen dioxide, and water. We have successfully deployed this instrument during two aircraft and two ground-based field campaigns. The demonstrated precision (2σ) for retrievals of CHOCHO, HONO, and NO2 are 34, 350, and 80 parts per trillion (pptv) in 5 s, with accuracy of 5.8, 9.0 and 5.0 %.
V. Shah, L. Jaeglé, L. E. Gratz, J. L. Ambrose, D. A. Jaffe, N. E. Selin, S. Song, T. L. Campos, F. M. Flocke, M. Reeves, D. Stechman, M. Stell, J. Festa, J. Stutz, A. J. Weinheimer, D. J. Knapp, D. D. Montzka, G. S. Tyndall, E. C. Apel, R. S. Hornbrook, A. J. Hills, D. D. Riemer, N. J. Blake, C. A. Cantrell, and R. L. Mauldin III
Atmos. Chem. Phys., 16, 1511–1530, https://doi.org/10.5194/acp-16-1511-2016, https://doi.org/10.5194/acp-16-1511-2016, 2016
Short summary
Short summary
We present airborne observations of mercury over the southeastern USA during summer. Higher concentrations of oxidized mercury were observed in clean, dry air masses descending in the subtropical anti-cyclones. We used an atmospheric model to simulate the chemistry and transport of mercury. We found reasonable agreement with the observations when the modeled oxidation of elemental mercury was increased, suggesting fast cycling between elemental and oxidized mercury.
R. J. Wild, P. M. Edwards, T. S. Bates, R. C. Cohen, J. A. de Gouw, W. P. Dubé, J. B. Gilman, J. Holloway, J. Kercher, A. R. Koss, L. Lee, B. M. Lerner, R. McLaren, P. K. Quinn, J. M. Roberts, J. Stutz, J. A. Thornton, P. R. Veres, C. Warneke, E. Williams, C. J. Young, B. Yuan, K. J. Zarzana, and S. S. Brown
Atmos. Chem. Phys., 16, 573–583, https://doi.org/10.5194/acp-16-573-2016, https://doi.org/10.5194/acp-16-573-2016, 2016
Short summary
Short summary
High wintertime ozone levels have been observed in the Uintah Basin, Utah, a sparsely populated rural region with intensive oil and gas operations. The reactive nitrogen budget plays an important role in tropospheric ozone formation, and we find that nighttime chemistry has a large effect on its partitioning. Much of the oxidation of reactive nitrogen during a high-ozone year occurred via heterogeneous uptake onto aerosol at night, keeping NOx at concentrations comparable to a low-ozone year.
S. P. Burns, P. D. Blanken, A. A. Turnipseed, J. Hu, and R. K. Monson
Biogeosciences, 12, 7349–7377, https://doi.org/10.5194/bg-12-7349-2015, https://doi.org/10.5194/bg-12-7349-2015, 2015
Short summary
Short summary
The effect of warm-season precipitation on
environmental conditions and ecosystem-scale fluxes at a
high-elevation subalpine forest site was investigated. As would be
expected (based on the surface energy balance), precipitation caused
an increase in latent heat flux (evapotranspiration) and a decrease in
sensible heat flux. The evaporative component of evapotranspiration
was, on average, estimated to be around 6% in dry conditions and
between 15-25% in partially wet conditions.
N. MacBean, F. Maignan, P. Peylin, C. Bacour, F.-M. Bréon, and P. Ciais
Biogeosciences, 12, 7185–7208, https://doi.org/10.5194/bg-12-7185-2015, https://doi.org/10.5194/bg-12-7185-2015, 2015
Short summary
Short summary
Previous model evaluation studies have shown that terrestrial biosphere models (TBMs) need a better representation of the leaf phenology, but the model deficiency could be related to incorrect model parameters or inaccurate model structure. This paper presents a framework for optimising the parameters of phenology models that are commonly used in TBMs. It further demonstrates that the optimisation can result in changes to trends in vegetation productivity and an improvement in gross C fluxes.
D. R. Thompson, I. Leifer, H. Bovensmann, M. Eastwood, M. Fladeland, C. Frankenberg, K. Gerilowski, R. O. Green, S. Kratwurst, T. Krings, B. Luna, and A. K. Thorpe
Atmos. Meas. Tech., 8, 4383–4397, https://doi.org/10.5194/amt-8-4383-2015, https://doi.org/10.5194/amt-8-4383-2015, 2015
Short summary
Short summary
We discuss principles for real-time infrared spectral signature detection and measurement, and report performance onboard the NASA Airborne Visible Infrared Spectrometer - Next Generation (AVIRIS-NG). We describe a case study of the NASA/ESA CO2 and MEthane eXperiment (COMEX), a multi-platform campaign to measure CH4 plumes released from anthropogenic sources including oil and gas infrastructure. AVIRIS-NG successfully detected CH4 plumes in concert with other in situ and remote instruments.
D. R. Bowling, J. E. Egan, S. J. Hall, and D. A. Risk
Biogeosciences, 12, 5143–5160, https://doi.org/10.5194/bg-12-5143-2015, https://doi.org/10.5194/bg-12-5143-2015, 2015
Short summary
Short summary
Soil respiration and its stable isotopes were studied in a subalpine forest. There was strong diel variability in soil efflux but not in the isotope content of soil efflux or CO2 from biological activity in the soil. Following rain, soil efflux increased, but the isotope content of these fluxes did not change. Temporal variation in the isotope content of soil efflux was unrelated to environmental variables. Results confirmed established theory regarding diffusive soil gas transport.
J. R. Worden, A. J. Turner, A. Bloom, S. S. Kulawik, J. Liu, M. Lee, R. Weidner, K. Bowman, C. Frankenberg, R. Parker, and V. H. Payne
Atmos. Meas. Tech., 8, 3433–3445, https://doi.org/10.5194/amt-8-3433-2015, https://doi.org/10.5194/amt-8-3433-2015, 2015
Short summary
Short summary
Here we demonstrate the potential for estimating lower tropospheric CH4 concentrations through the combination of free-tropospheric methane measurements from the Aura Tropospheric Emission Spectrometer (TES) and XCH4 (dry-mole air fraction of methane) from the Greenhouse Gases Observing Satellite - Thermal And Near-infrared for carbon Observation (GOSAT TANSO).
E. N. Koffi, P. J. Rayner, A. J. Norton, C. Frankenberg, and M. Scholze
Biogeosciences, 12, 4067–4084, https://doi.org/10.5194/bg-12-4067-2015, https://doi.org/10.5194/bg-12-4067-2015, 2015
Short summary
Short summary
We investigate the utility of satellite measurements of solar-induced chlorophyll fluorescence (SIF) in constraining gross primary productivity (GPP). We simulate SIF with the biosphere model BETHY coupled with the fluorescence model SCOPE. The model simulates well the patterns of SIF. SIF is sensitive to leaf chlorophyll and incoming radiation but not to the key physiological parameter Vcmax controlling GPP. Thus, further model development is necessary before SIF can be used to constrain GPP.
R. A. Scheepmaker, C. Frankenberg, N. M. Deutscher, M. Schneider, S. Barthlott, T. Blumenstock, O. E. Garcia, F. Hase, N. Jones, E. Mahieu, J. Notholt, V. Velazco, J. Landgraf, and I. Aben
Atmos. Meas. Tech., 8, 1799–1818, https://doi.org/10.5194/amt-8-1799-2015, https://doi.org/10.5194/amt-8-1799-2015, 2015
L. Guanter, I. Aben, P. Tol, J. M. Krijger, A. Hollstein, P. Köhler, A. Damm, J. Joiner, C. Frankenberg, and J. Landgraf
Atmos. Meas. Tech., 8, 1337–1352, https://doi.org/10.5194/amt-8-1337-2015, https://doi.org/10.5194/amt-8-1337-2015, 2015
Short summary
Short summary
This paper investigates the potential of the upcoming TROPOspheric Monitoring Instrument (TROPOMI) instrument for the retrieval of the chlorophyll fluorescence signal emitted in the 650–850nm spectral range by the photosynthetic machinery of green plants. We find that TROPOMI will allow substantial improvements in the space monitoring of fluorescence with respect to current spaceborne instruments such as GOME-2 and SCIAMACHY.
C. Prados-Roman, C. A. Cuevas, T. Hay, R. P. Fernandez, A. S. Mahajan, S.-J. Royer, M. Galí, R. Simó, J. Dachs, K. Großmann, D. E. Kinnison, J.-F. Lamarque, and A. Saiz-Lopez
Atmos. Chem. Phys., 15, 583–593, https://doi.org/10.5194/acp-15-583-2015, https://doi.org/10.5194/acp-15-583-2015, 2015
C. Frankenberg, R. Pollock, R. A. M. Lee, R. Rosenberg, J.-F. Blavier, D. Crisp, C. W. O'Dell, G. B. Osterman, C. Roehl, P. O. Wennberg, and D. Wunch
Atmos. Meas. Tech., 8, 301–313, https://doi.org/10.5194/amt-8-301-2015, https://doi.org/10.5194/amt-8-301-2015, 2015
M. Alexe, P. Bergamaschi, A. Segers, R. Detmers, A. Butz, O. Hasekamp, S. Guerlet, R. Parker, H. Boesch, C. Frankenberg, R. A. Scheepmaker, E. Dlugokencky, C. Sweeney, S. C. Wofsy, and E. A. Kort
Atmos. Chem. Phys., 15, 113–133, https://doi.org/10.5194/acp-15-113-2015, https://doi.org/10.5194/acp-15-113-2015, 2015
S. Kuppel, P. Peylin, F. Maignan, F. Chevallier, G. Kiely, L. Montagnani, and A. Cescatti
Geosci. Model Dev., 7, 2581–2597, https://doi.org/10.5194/gmd-7-2581-2014, https://doi.org/10.5194/gmd-7-2581-2014, 2014
Short summary
Short summary
A consistent calibration of an advanced land surface model was performed by grouping in situ information on land-atmosphere exchanges of carbon and water using broad ecosystem and climate classes. Signatures of improved carbon cycle simulations were found across spatial and temporal scales, along with insights into current model limitations. These results hold promising perspectives within the ongoing efforts towards building robust model-data fusion frameworks for earth system models.
V. Gryazin, C. Risi, J. Jouzel, N. Kurita, J. Worden, C. Frankenberg, V. Bastrikov, K. Gribanov, and O. Stukova
Atmos. Chem. Phys., 14, 9807–9830, https://doi.org/10.5194/acp-14-9807-2014, https://doi.org/10.5194/acp-14-9807-2014, 2014
J. B. Fisher, M. Sikka, W. C. Oechel, D. N. Huntzinger, J. R. Melton, C. D. Koven, A. Ahlström, M. A. Arain, I. Baker, J. M. Chen, P. Ciais, C. Davidson, M. Dietze, B. El-Masri, D. Hayes, C. Huntingford, A. K. Jain, P. E. Levy, M. R. Lomas, B. Poulter, D. Price, A. K. Sahoo, K. Schaefer, H. Tian, E. Tomelleri, H. Verbeeck, N. Viovy, R. Wania, N. Zeng, and C. E. Miller
Biogeosciences, 11, 4271–4288, https://doi.org/10.5194/bg-11-4271-2014, https://doi.org/10.5194/bg-11-4271-2014, 2014
S. Massart, A. Agusti-Panareda, I. Aben, A. Butz, F. Chevallier, C. Crevoisier, R. Engelen, C. Frankenberg, and O. Hasekamp
Atmos. Chem. Phys., 14, 6139–6158, https://doi.org/10.5194/acp-14-6139-2014, https://doi.org/10.5194/acp-14-6139-2014, 2014
B. Dils, M. Buchwitz, M. Reuter, O. Schneising, H. Boesch, R. Parker, S. Guerlet, I. Aben, T. Blumenstock, J. P. Burrows, A. Butz, N. M. Deutscher, C. Frankenberg, F. Hase, O. P. Hasekamp, J. Heymann, M. De Mazière, J. Notholt, R. Sussmann, T. Warneke, D. Griffith, V. Sherlock, and D. Wunch
Atmos. Meas. Tech., 7, 1723–1744, https://doi.org/10.5194/amt-7-1723-2014, https://doi.org/10.5194/amt-7-1723-2014, 2014
S. Houweling, M. Krol, P. Bergamaschi, C. Frankenberg, E. J. Dlugokencky, I. Morino, J. Notholt, V. Sherlock, D. Wunch, V. Beck, C. Gerbig, H. Chen, E. A. Kort, T. Röckmann, and I. Aben
Atmos. Chem. Phys., 14, 3991–4012, https://doi.org/10.5194/acp-14-3991-2014, https://doi.org/10.5194/acp-14-3991-2014, 2014
C. J. Young, R. A. Washenfelder, P. M. Edwards, D. D. Parrish, J. B. Gilman, W. C. Kuster, L. H. Mielke, H. D. Osthoff, C. Tsai, O. Pikelnaya, J. Stutz, P. R. Veres, J. M. Roberts, S. Griffith, S. Dusanter, P. S. Stevens, J. Flynn, N. Grossberg, B. Lefer, J. S. Holloway, J. Peischl, T. B. Ryerson, E. L. Atlas, D. R. Blake, and S. S. Brown
Atmos. Chem. Phys., 14, 3427–3440, https://doi.org/10.5194/acp-14-3427-2014, https://doi.org/10.5194/acp-14-3427-2014, 2014
C. Liu, S. Beirle, T. Butler, P. Hoor, C. Frankenberg, P. Jöckel, M. Penning de Vries, U. Platt, A. Pozzer, M. G. Lawrence, J. Lelieveld, H. Tost, and T. Wagner
Atmos. Chem. Phys., 14, 1717–1732, https://doi.org/10.5194/acp-14-1717-2014, https://doi.org/10.5194/acp-14-1717-2014, 2014
S. J. Burns and S. P. Burns
Solid Earth Discuss., https://doi.org/10.5194/sed-6-487-2014, https://doi.org/10.5194/sed-6-487-2014, 2014
Revised manuscript not accepted
A. K. Thorpe, C. Frankenberg, and D. A. Roberts
Atmos. Meas. Tech., 7, 491–506, https://doi.org/10.5194/amt-7-491-2014, https://doi.org/10.5194/amt-7-491-2014, 2014
C. R. Schwalm, D. N. Huntinzger, R. B. Cook, Y. Wei, I. T. Baker, R. P. Neilson, B. Poulter, P. Caldwell, G. Sun, H. Q. Tian, and N. Zeng
Biogeosciences Discuss., https://doi.org/10.5194/bgd-11-1801-2014, https://doi.org/10.5194/bgd-11-1801-2014, 2014
Revised manuscript not accepted
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893–6909, https://doi.org/10.5194/bg-10-6893-2013, https://doi.org/10.5194/bg-10-6893-2013, 2013
J. Joiner, L. Guanter, R. Lindstrot, M. Voigt, A. P. Vasilkov, E. M. Middleton, K. F. Huemmrich, Y. Yoshida, and C. Frankenberg
Atmos. Meas. Tech., 6, 2803–2823, https://doi.org/10.5194/amt-6-2803-2013, https://doi.org/10.5194/amt-6-2803-2013, 2013
L. Mandrake, C. Frankenberg, C. W. O'Dell, G. Osterman, P. Wennberg, and D. Wunch
Atmos. Meas. Tech., 6, 2851–2864, https://doi.org/10.5194/amt-6-2851-2013, https://doi.org/10.5194/amt-6-2851-2013, 2013
D. Wunch, P. O. Wennberg, J. Messerschmidt, N. C. Parazoo, G. C. Toon, N. M. Deutscher, G. Keppel-Aleks, C. M. Roehl, J. T. Randerson, T. Warneke, and J. Notholt
Atmos. Chem. Phys., 13, 9447–9459, https://doi.org/10.5194/acp-13-9447-2013, https://doi.org/10.5194/acp-13-9447-2013, 2013
R. A. Scheepmaker, C. Frankenberg, A. Galli, A. Butz, H. Schrijver, N. M. Deutscher, D. Wunch, T. Warneke, S. Fally, and I. Aben
Atmos. Meas. Tech., 6, 879–894, https://doi.org/10.5194/amt-6-879-2013, https://doi.org/10.5194/amt-6-879-2013, 2013
J. Worden, K. Wecht, C. Frankenberg, M. Alvarado, K. Bowman, E. Kort, S. Kulawik, M. Lee, V. Payne, and H. Worden
Atmos. Chem. Phys., 13, 3679–3692, https://doi.org/10.5194/acp-13-3679-2013, https://doi.org/10.5194/acp-13-3679-2013, 2013
K. W. Wong, C. Tsai, B. Lefer, N. Grossberg, and J. Stutz
Atmos. Chem. Phys., 13, 3587–3601, https://doi.org/10.5194/acp-13-3587-2013, https://doi.org/10.5194/acp-13-3587-2013, 2013
K. Großmann, U. Frieß, E. Peters, F. Wittrock, J. Lampel, S. Yilmaz, J. Tschritter, R. Sommariva, R. von Glasow, B. Quack, K. Krüger, K. Pfeilsticker, and U. Platt
Atmos. Chem. Phys., 13, 3363–3378, https://doi.org/10.5194/acp-13-3363-2013, https://doi.org/10.5194/acp-13-3363-2013, 2013
C. Frankenberg, D. Wunch, G. Toon, C. Risi, R. Scheepmaker, J.-E. Lee, P. Wennberg, and J. Worden
Atmos. Meas. Tech., 6, 263–274, https://doi.org/10.5194/amt-6-263-2013, https://doi.org/10.5194/amt-6-263-2013, 2013
H. M. Worden, M. N. Deeter, C. Frankenberg, M. George, F. Nichitiu, J. Worden, I. Aben, K. W. Bowman, C. Clerbaux, P. F. Coheur, A. T. J. de Laat, R. Detweiler, J. R. Drummond, D. P. Edwards, J. C. Gille, D. Hurtmans, M. Luo, S. Martínez-Alonso, S. Massie, G. Pfister, and J. X. Warner
Atmos. Chem. Phys., 13, 837–850, https://doi.org/10.5194/acp-13-837-2013, https://doi.org/10.5194/acp-13-837-2013, 2013
Related subject area
Biogeochemistry: Modelling, Terrestrial
Effect of droughts and climate change on future soil weathering rates in Sweden
Information content in time series of litter decomposition studies and the transit time of litter in arid lands
Long-term changes of nitrogen leaching and the contributions of terrestrial nutrient sources to lake eutrophication dynamics on the Yangtze Plain of China
Towards an ensemble-based evaluation of land surface models in light of uncertain forcings and observations
Effect of land-use legacy on the future carbon sink for the conterminous US
Peatlands and their carbon dynamics in northern high latitudes from 1990 to 2300: a process-based biogeochemistry model analysis
Improved representation of phosphorus exchange on soil mineral surfaces reduces estimates of phosphorus limitation in temperate forest ecosystems
Improved process representation of leaf phenology significantly shifts climate sensitivity of ecosystem carbon balance
A coupled ground heat flux–surface energy balance model of evaporation using thermal remote sensing observations
Optimizing the Carbonic Anhydrase temperature response and stomatal conductance of carbonyl sulfide leaf uptake in the simple biosphere model (SiB4)
Modeling nitrous oxide emissions from agricultural soil incubation experiments using CoupModel
Mapping of ESA-CCI land cover data to plant functional types for use in the CLASSIC land model
Key drivers of the annual carbon budget of biocrusts from various climatic zones determined with a mechanistic data-driven model
Local-scale evaluation of the simulated interactions between energy, water and vegetation in ISBA, ORCHIDEE and a diagnostic model
Implementation and initial calibration of carbon-13 soil organic matter decomposition in the Yasso model
Potassium-limitation of forest productivity, part 1: A mechanistic model simulating the effects of potassium availability on canopy carbon and water fluxes in tropical eucalypt stands
Potassium-limitation of forest productivity, part 2: CASTANEA-MAESPA-K shows a reduction in photosynthesis rather than a stoichiometric limitation of tissue formation
The carbon budget of the managed grasslands of Great Britain – informed by earth observations
Accounting for non-rainfall moisture and temperature improves litter decay model performance in a fog-dominated dryland system
Assessing carbon storage capacity and saturation across six central US grasslands using data-model integration
Ideas and perspectives: Allocation of carbon from net primary production in models is inconsistent with observations of the age of respired carbon
Exploring the role of bedrock representation on plant transpiration response during dry periods at four forested sites in Europe
Effects of climate change in European croplands and grasslands: productivity, greenhouse gas balance and soil carbon storage
Assimilation of passive microwave vegetation optical depth in LDAS-Monde: a case study over the continental USA
Global modelling of soil carbonyl sulfide exchanges
Assessing the impacts of agricultural managements on soil carbon stocks, nitrogen loss, and crop production – a modelling study in eastern Africa
The effects of varying drought-heat signatures on terrestrial carbon dynamics and vegetation composition
Exploring the impacts of unprecedented climate extremes on forest ecosystems: hypotheses to guide modeling and experimental studies
Resolving temperature limitation on spring productivity in an evergreen conifer forest using a model–data fusion framework
A robust initialization method for accurate soil organic carbon simulations
Evaluation of carbonyl sulfide biosphere exchange in the Simple Biosphere Model (SiB4)
Model simulations of arctic biogeochemistry and permafrost extent are highly sensitive to the implemented snow scheme in LPJ-GUESS
Theoretical insights from upscaling Michaelis–Menten microbial dynamics in biogeochemical models: a dimensionless approach
Estimated effect of the permafrost carbon feedback on the zero emissions commitment to climate change
An improved process-oriented hydro-biogeochemical model for simulating dynamic fluxes of methane and nitrous oxide in alpine ecosystems with seasonally frozen soils
A novel representation of biological nitrogen fixation and competitive dynamics between nitrogen-fixing and non-fixing plants in a land model (GFDL LM4.1-BNF)
Organic phosphorus cycling may control grassland responses to nitrogen deposition: a long-term field manipulation and modelling study
A triple tree-ring constraint for tree growth and physiology in a global land surface model
Simulating shrubs and their energy and carbon dioxide fluxes in Canada's Low Arctic with the Canadian Land Surface Scheme Including Biogeochemical Cycles (CLASSIC)
Competing effects of nitrogen deposition and ozone exposure on northern hemispheric terrestrial carbon uptake and storage, 1850–2099
Carbonyl sulfide: comparing a mechanistic representation of the vegetation uptake in a land surface model and the leaf relative uptake approach
Optimal model complexity for terrestrial carbon cycle prediction
CO2 physiological effect can cause rainfall decrease as strong as large-scale deforestation in the Amazon
Plant phenology evaluation of CRESCENDO land surface models – Part 1: Start and end of the growing season
Understanding the effect of fire on vegetation composition and gross primary production in a semi-arid shrubland ecosystem using the Ecosystem Demography (EDv2.2) model
Impacts of fertilization on grassland productivity and water quality across the European Alps under current and warming climate: insights from a mechanistic model
The climate benefit of carbon sequestration
Extending a land-surface model with Sphagnum moss to simulate responses of a northern temperate bog to whole ecosystem warming and elevated CO2
Improving the representation of high-latitude vegetation distribution in dynamic global vegetation models
Robust processing of airborne laser scans to plant area density profiles
Veronika Kronnäs, Klas Lucander, Giuliana Zanchi, Nadja Stadlinger, Salim Belyazid, and Cecilia Akselsson
Biogeosciences, 20, 1879–1899, https://doi.org/10.5194/bg-20-1879-2023, https://doi.org/10.5194/bg-20-1879-2023, 2023
Short summary
Short summary
In a future climate, extreme droughts might become more common. Climate change and droughts can have negative effects on soil weathering and plant health.
In this study, climate change effects on weathering were studied on sites in Sweden using the model ForSAFE, a climate change scenario and an extreme drought scenario. The modelling shows that weathering is higher during summer and increases with global warming but that weathering during drought summers can become as low as winter weathering.
Agustín Sarquis and Carlos A. Sierra
Biogeosciences, 20, 1759–1771, https://doi.org/10.5194/bg-20-1759-2023, https://doi.org/10.5194/bg-20-1759-2023, 2023
Short summary
Short summary
Although plant litter is chemically and physically heterogenous and undergoes multiple transformations, models that represent litter dynamics often ignore this complexity. We used a multi-model inference framework to include information content in litter decomposition datasets and studied the time it takes for litter to decompose as measured by the transit time. In arid lands, the median transit time of litter is about 3 years and has a negative correlation with mean annual temperature.
Qi Guan, Jing Tang, Lian Feng, Stefan Olin, and Guy Schurgers
Biogeosciences, 20, 1635–1648, https://doi.org/10.5194/bg-20-1635-2023, https://doi.org/10.5194/bg-20-1635-2023, 2023
Short summary
Short summary
Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
Vivek K. Arora, Christian Seiler, Libo Wang, and Sian Kou-Giesbrecht
Biogeosciences, 20, 1313–1355, https://doi.org/10.5194/bg-20-1313-2023, https://doi.org/10.5194/bg-20-1313-2023, 2023
Short summary
Short summary
The behaviour of natural systems is now very often represented through mathematical models. These models represent our understanding of how nature works. Of course, nature does not care about our understanding. Since our understanding is not perfect, evaluating models is challenging, and there are uncertainties. This paper illustrates this uncertainty for land models and argues that evaluating models in light of the uncertainty in various components provides useful information.
Benjamin S. Felzer
Biogeosciences, 20, 573–587, https://doi.org/10.5194/bg-20-573-2023, https://doi.org/10.5194/bg-20-573-2023, 2023
Short summary
Short summary
The future of the terrestrial carbon sink depends upon the legacy of past land use, which determines the stand age of the forest and nutrient levels in the soil, both of which affect vegetation growth. This study uses a modeling approach to determine the effects of land-use legacy in the conterminous US from 1750 to 2099. Not accounting for land legacy results in a low carbon sink and high biomass, while water variables are not as highly affected.
Bailu Zhao and Qianlai Zhuang
Biogeosciences, 20, 251–270, https://doi.org/10.5194/bg-20-251-2023, https://doi.org/10.5194/bg-20-251-2023, 2023
Short summary
Short summary
In this study, we use a process-based model to simulate the northern peatland's C dynamics in response to future climate change during 1990–2300. Northern peatlands are projected to be a C source under all climate scenarios except for the mildest one before 2100 and C sources under all scenarios afterwards.
We find northern peatlands are a C sink until pan-Arctic annual temperature reaches −2.09 to −2.89 °C. This study emphasizes the vulnerability of northern peatlands to climate change.
Lin Yu, Silvia Caldararu, Bernhard Ahrens, Thomas Wutzler, Marion Schrumpf, Julian Helfenstein, Chiara Pistocchi, and Sönke Zaehle
Biogeosciences, 20, 57–73, https://doi.org/10.5194/bg-20-57-2023, https://doi.org/10.5194/bg-20-57-2023, 2023
Short summary
Short summary
In this study, we addressed a key weakness in current ecosystem models regarding the phosphorus exchange in the soil and developed a new scheme to describe this process. We showed that the new scheme improved the model performance for plant productivity, soil organic carbon, and soil phosphorus content at five beech forest sites in Germany. We claim that this new model could be used as a better tool to study ecosystems under future climate change, particularly phosphorus-limited systems.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and Luke T. Smallman
EGUsphere, https://doi.org/10.5194/egusphere-2022-1265, https://doi.org/10.5194/egusphere-2022-1265, 2022
Short summary
Short summary
This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Bimal K. Bhattacharya, Kaniska Mallick, Devansh Desai, Ganapati S. Bhat, Ross Morrison, Jamie R. Clevery, William Woodgate, Jason Beringer, Kerry Cawse-Nicholson, Siyan Ma, Joseph Verfaillie, and Dennis Baldocchi
Biogeosciences, 19, 5521–5551, https://doi.org/10.5194/bg-19-5521-2022, https://doi.org/10.5194/bg-19-5521-2022, 2022
Short summary
Short summary
Evaporation retrieval in heterogeneous ecosystems is challenging due to empirical estimation of ground heat flux and complex parameterizations of conductances. We developed a parameter-sparse coupled ground heat flux-evaporation model and tested it across different limits of water stress and vegetation fraction in the Northern/Southern Hemisphere. The model performed particularly well in the savannas and showed good potential for evaporative stress monitoring from thermal infrared satellites.
Ara Cho, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Richard Wehr, and Maarten C. Krol
EGUsphere, https://doi.org/10.5194/egusphere-2022-1305, https://doi.org/10.5194/egusphere-2022-1305, 2022
Short summary
Short summary
Carbonyl Sulfide (COS) is a useful constraint on photosynthesis. To simulate COS leaf flux better in the SiB4 model, we propose a new temperature function for the enzyme carbonic anhydrase (CA) and optimize conductances using observations. CA has an optimum temperature below 40 °C, which can be influenced critically by air temperature changes. It brings tropics a smaller and higher latitudes a larger uptake. This update helps resolve gaps in the COS budget identified in earlier studies.
Jie Zhang, Wenxin Zhang, Per-Erik Jansson, and Søren O. Petersen
Biogeosciences, 19, 4811–4832, https://doi.org/10.5194/bg-19-4811-2022, https://doi.org/10.5194/bg-19-4811-2022, 2022
Short summary
Short summary
In this study, we relied on a properly controlled laboratory experiment to test the model’s capability of simulating the dominant microbial processes and the emissions of one greenhouse gas (nitrous oxide, N2O) from agricultural soils. This study reveals important processes and parameters that regulate N2O emissions in the investigated model framework and also suggests future steps of model development, which have implications on the broader communities of ecosystem modelers.
Libo Wang, Vivek K. Arora, Paul Bartlett, Ed Chan, and Salvatore R. Curasi
EGUsphere, https://doi.org/10.5194/egusphere-2022-923, https://doi.org/10.5194/egusphere-2022-923, 2022
Short summary
Short summary
Plant functional types (PFTs) are groups of plant species used to represent vegetation distribution in land surface models. There are large uncertainties associated with existing methods for mapping land cover datasets to PFTs. This study demonstrates how fine-resolution tree cover fraction and land cover datasets can be used to inform the PFT mapping process and reduce the uncertainties. The proposed largely objective method makes it easier to implement new land cover products in models.
Yunyao Ma, Bettina Weber, Alexandra Kratz, José Raggio, Claudia Colesie, Maik Veste, Maaike Y. Bader, and Philipp Porada
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-179, https://doi.org/10.5194/bg-2022-179, 2022
Revised manuscript accepted for BG
Short summary
Short summary
Our study found while air temperature, ambient CO2 concentration, light intensity, and relative humidity are key drivers for annual carbon (C) balance, their relative impacts vary markedly among climatic zones. Moreover, seasonal acclimation may alter the C balance substantially at humid sites. Our study implies that climate change may have large effects on biocrust C balance at global scale, and suggests covering different seasons when measuring physiological traits to account for acclimation.
Jan De Pue, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Manuela Balzarolo, Fabienne Maignan, and Françoise Gellens-Meulenberghs
Biogeosciences, 19, 4361–4386, https://doi.org/10.5194/bg-19-4361-2022, https://doi.org/10.5194/bg-19-4361-2022, 2022
Short summary
Short summary
The functioning of ecosystems involves numerous biophysical processes which interact with each other. Land surface models (LSMs) are used to describe these processes and form an essential component of climate models. In this paper, we evaluate the performance of three LSMs and their interactions with soil moisture and vegetation. Though we found room for improvement in the simulation of soil moisture and drought stress, the main cause of errors was related to the simulated growth of vegetation.
Jarmo Mäkelä, Laura Arppe, Hannu Fritze, Jussi Heinonsalo, Kristiina Karhu, Jari Liski, Markku Oinonen, Petra Straková, and Toni Viskari
Biogeosciences, 19, 4305–4313, https://doi.org/10.5194/bg-19-4305-2022, https://doi.org/10.5194/bg-19-4305-2022, 2022
Short summary
Short summary
Soils account for the largest share of carbon found in terrestrial ecosystems, and accurate depiction of soil carbon decomposition is essential in understanding how permanent these carbon storages are. We present a straightforward way to include carbon isotope concentrations into soil decomposition and carbon storages for the Yasso model, which enables the model to use 13C as a natural tracer to track changes in the underlying soil organic matter decomposition.
Ivan Cornut, Nicolas Delpierre, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, Otavio Campoe, Jose Luiz Stape, Vitoria Fernanda Santos, and Guerric le Maire
EGUsphere, https://doi.org/10.5194/egusphere-2022-883, https://doi.org/10.5194/egusphere-2022-883, 2022
Short summary
Short summary
Potassium is an essential element for living organisms. Trees are dependent upon this element for certain of their functions that allow them to build their trunk using carbon dioxide. Using data from experiments in eucalypt plantations in Brazil and a simplified computer model of the plantations we were able to investigate the effect the lack of potassium can have on the production of wood. Understanding nutrient cycles is useful to understand the response of forests to environmental change.
Ivan Cornut, Guerric le Maire, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, and Nicolas Delpierre
EGUsphere, https://doi.org/10.5194/egusphere-2022-884, https://doi.org/10.5194/egusphere-2022-884, 2022
Short summary
Short summary
After simulating the effects of low levels of Potassium on the canopy of trees and the uptake of carbon dioxide from the atmosphere by leaves in part 1, here we tried to simulate the way the trees use the carbon they have acquired and the interaction with the potassium cycle in the tree. We show that the effect of low potassium on the efficiency of the trees to acquire carbon is enought to exlplain why they do not produce enough wood when they are in soils with low levels of potassium.
Vasileios Myrgiotis, Thomas Luke Smallman, and Mathew Williams
Biogeosciences, 19, 4147–4170, https://doi.org/10.5194/bg-19-4147-2022, https://doi.org/10.5194/bg-19-4147-2022, 2022
Short summary
Short summary
This study shows that livestock grazing and grass cutting can determine whether a grassland is adding (source) or removing (sink) carbon (C) to/from the atmosphere. The annual C balance of 1855 managed grassland fields in Great Britain was quantified for 2017–2018 using process modelling and earth observation data. The examined fields were, on average, small C sinks, but the summer drought of 2018 led to a 9-fold increase in the number of fields that became C sources in 2018 compared to 2017.
J. Robert Logan, Kathe E. Todd-Brown, Kathryn M. Jacobson, Peter J. Jacobson, Roland Vogt, and Sarah E. Evans
Biogeosciences, 19, 4129–4146, https://doi.org/10.5194/bg-19-4129-2022, https://doi.org/10.5194/bg-19-4129-2022, 2022
Short summary
Short summary
Understanding how plants decompose is important for understanding where the atmospheric CO2 they absorb ends up after they die. In forests, decomposition is controlled by rain but not in deserts. We performed a 2.5-year study in one of the driest places on earth (the Namib desert in southern Africa) and found that fog and dew, not rainfall, closely controlled how quickly plants decompose. We also created a model to help predict decomposition in drylands with lots of fog and/or dew.
Kevin R. Wilcox, Scott L. Collins, Alan K. Knapp, William Pockman, Zheng Shi, Melinda Smith, and Yiqi Luo
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-164, https://doi.org/10.5194/bg-2022-164, 2022
Revised manuscript accepted for BG
Short summary
Short summary
The capacity for carbon storage (C capacity) is an attribute that determines how ecosystems will store carbon in the future. Here, we employ novel data-model integration techniques to identify the carbon capacity of six grassland sites spanning the US Great Plains. Hot and dry sites had low C capacity due to less plant growth and high turnover of soil C so they may be a C source in the future. Alternately, cooler and wetter ecosystems had high C capacity, so these systems may be a future C sink.
Carlos A. Sierra, Verónika Ceballos-Núñez, Henrik Hartmann, David Herrera-Ramírez, and Holger Metzler
Biogeosciences, 19, 3727–3738, https://doi.org/10.5194/bg-19-3727-2022, https://doi.org/10.5194/bg-19-3727-2022, 2022
Short summary
Short summary
Empirical work that estimates the age of respired CO2 from vegetation tissue shows that it may take from years to decades to respire previously produced photosynthates. However, many ecosystem models represent respiration processes in a form that cannot reproduce these observations. In this contribution, we attempt to provide compelling evidence, based on recent research, with the aim to promote a change in the predominant paradigm implemented in ecosystem models.
César Dionisio Jiménez-Rodríguez, Mauro Sulis, and Stanislaus Schymanski
Biogeosciences, 19, 3395–3423, https://doi.org/10.5194/bg-19-3395-2022, https://doi.org/10.5194/bg-19-3395-2022, 2022
Short summary
Short summary
Vegetation relies on soil water reservoirs during dry periods. However, when this source is depleted, the plants may access water stored deeper in the rocks. This rock moisture contribution is usually omitted in large-scale models, which affects modeled plant water use during dry periods. Our study illustrates that including this additional source of water in the Community Land Model improves the model's ability to reproduce observed plant water use at seasonally dry sites.
Marco Carozzi, Raphaël Martin, Katja Klumpp, and Raia Silvia Massad
Biogeosciences, 19, 3021–3050, https://doi.org/10.5194/bg-19-3021-2022, https://doi.org/10.5194/bg-19-3021-2022, 2022
Short summary
Short summary
Crop and grassland production indicates a strong reduction due to the shortening of the length of the growing cycle associated with rising temperatures. Greenhouse gas emissions will increase exponentially over the century, often exceeding the CO2 accumulation of agro-ecosystems. Water demand will double in the next few decades, whereas the benefits in terms of yield will not fill the gap of C losses due to climate perturbation. Climate change will have a regionally distributed effect in the EU.
Anthony Mucia, Bertrand Bonan, Clément Albergel, Yongjun Zheng, and Jean-Christophe Calvet
Biogeosciences, 19, 2557–2581, https://doi.org/10.5194/bg-19-2557-2022, https://doi.org/10.5194/bg-19-2557-2022, 2022
Short summary
Short summary
For the first time, microwave vegetation optical depth data are assimilated in a land surface model in order to analyze leaf area index and root zone soil moisture. The advantage of microwave products is the higher observation frequency. A large variety of independent datasets are used to verify the added value of the assimilation. It is shown that the assimilation is able to improve the representation of soil moisture, vegetation conditions, and terrestrial water and carbon fluxes.
Camille Abadie, Fabienne Maignan, Marine Remaud, Jérôme Ogée, J. Elliott Campbell, Mary E. Whelan, Florian Kitz, Felix M. Spielmann, Georg Wohlfahrt, Richard Wehr, Wu Sun, Nina Raoult, Ulli Seibt, Didier Hauglustaine, Sinikka T. Lennartz, Sauveur Belviso, David Montagne, and Philippe Peylin
Biogeosciences, 19, 2427–2463, https://doi.org/10.5194/bg-19-2427-2022, https://doi.org/10.5194/bg-19-2427-2022, 2022
Short summary
Short summary
A better constraint of the components of the carbonyl sulfide (COS) global budget is needed to exploit its potential as a proxy of gross primary productivity. In this study, we compare two representations of oxic soil COS fluxes, and we develop an approach to represent anoxic soil COS fluxes in a land surface model. We show the importance of atmospheric COS concentration variations on oxic soil COS fluxes and provide new estimates for oxic and anoxic soil contributions to the COS global budget.
Jianyong Ma, Sam S. Rabin, Peter Anthoni, Anita D. Bayer, Sylvia S. Nyawira, Stefan Olin, Longlong Xia, and Almut Arneth
Biogeosciences, 19, 2145–2169, https://doi.org/10.5194/bg-19-2145-2022, https://doi.org/10.5194/bg-19-2145-2022, 2022
Short summary
Short summary
Improved agricultural management plays a vital role in protecting soils from degradation in eastern Africa. We simulated the impacts of seven management practices on soil carbon pools, nitrogen loss, and crop yield under different climate scenarios in this region. This study highlights the possibilities of conservation agriculture when targeting long-term environmental sustainability and food security in crop ecosystems, particularly for those with poor soil conditions in tropical climates.
Elisabeth Tschumi, Sebastian Lienert, Karin van der Wiel, Fortunat Joos, and Jakob Zscheischler
Biogeosciences, 19, 1979–1993, https://doi.org/10.5194/bg-19-1979-2022, https://doi.org/10.5194/bg-19-1979-2022, 2022
Short summary
Short summary
Droughts and heatwaves are expected to occur more often in the future, but their effects on land vegetation and the carbon cycle are poorly understood. We use six climate scenarios with differing extreme occurrences and a vegetation model to analyse these effects. Tree coverage and associated plant productivity increase under a climate with no extremes. Frequent co-occurring droughts and heatwaves decrease plant productivity more than the combined effects of single droughts or heatwaves.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-65, https://doi.org/10.5194/bg-2022-65, 2022
Revised manuscript accepted for BG
Short summary
Short summary
Unprecedented climate extremes (UCEs) are expected to have dramatic impacts for ecosystems. We examine extreme droughts with rising CO2 and temperatures using two dynamic vegetation models, to assess ecological processes to measure, and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explored specific plant responses that reflect knowledge gaps.
Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
Short summary
Short summary
Uncertainty in the response of photosynthesis to temperature poses a major challenge to predicting the response of forests to climate change. In this paper, we study how photosynthesis in a mountainous evergreen forest is limited by temperature. This study highlights that cold temperature is a key factor that controls spring photosynthesis. Including the cold-temperature limitation in an ecosystem model improved its ability to simulate spring photosynthesis.
Eva Kanari, Lauric Cécillon, François Baudin, Hugues Clivot, Fabien Ferchaud, Sabine Houot, Florent Levavasseur, Bruno Mary, Laure Soucémarianadin, Claire Chenu, and Pierre Barré
Biogeosciences, 19, 375–387, https://doi.org/10.5194/bg-19-375-2022, https://doi.org/10.5194/bg-19-375-2022, 2022
Short summary
Short summary
Soil organic carbon (SOC) is crucial for climate regulation, soil quality, and food security. Predicting its evolution over the next decades is key for appropriate land management policies. However, SOC projections lack accuracy. Here we show for the first time that PARTYSOC, an approach combining thermal analysis and machine learning optimizes the accuracy of SOC model simulations at independent sites. This method can be applied at large scales, improving SOC projections on a continental scale.
Linda M. J. Kooijmans, Ara Cho, Jin Ma, Aleya Kaushik, Katherine D. Haynes, Ian Baker, Ingrid T. Luijkx, Mathijs Groenink, Wouter Peters, John B. Miller, Joseph A. Berry, Jerome Ogée, Laura K. Meredith, Wu Sun, Kukka-Maaria Kohonen, Timo Vesala, Ivan Mammarella, Huilin Chen, Felix M. Spielmann, Georg Wohlfahrt, Max Berkelhammer, Mary E. Whelan, Kadmiel Maseyk, Ulli Seibt, Roisin Commane, Richard Wehr, and Maarten Krol
Biogeosciences, 18, 6547–6565, https://doi.org/10.5194/bg-18-6547-2021, https://doi.org/10.5194/bg-18-6547-2021, 2021
Short summary
Short summary
The gas carbonyl sulfide (COS) can be used to estimate photosynthesis. To adopt this approach on regional and global scales, we need biosphere models that can simulate COS exchange. So far, such models have not been evaluated against observations. We evaluate the COS biosphere exchange of the SiB4 model against COS flux observations. We find that the model is capable of simulating key processes in COS biosphere exchange. Still, we give recommendations for further improvement of the model.
Alexandra Pongracz, David Wårlind, Paul A. Miller, and Frans-Jan W. Parmentier
Biogeosciences, 18, 5767–5787, https://doi.org/10.5194/bg-18-5767-2021, https://doi.org/10.5194/bg-18-5767-2021, 2021
Short summary
Short summary
This study shows that the introduction of a multi-layer snow scheme in the LPJ-GUESS DGVM improved simulations of high-latitude soil temperature dynamics and permafrost extent compared to observations. In addition, these improvements led to shifts in carbon fluxes that contrasted within and outside of the permafrost region. Our results show that a realistic snow scheme is essential to accurately simulate snow–soil–vegetation relationships and carbon–climate feedbacks.
Chris H. Wilson and Stefan Gerber
Biogeosciences, 18, 5669–5679, https://doi.org/10.5194/bg-18-5669-2021, https://doi.org/10.5194/bg-18-5669-2021, 2021
Short summary
Short summary
To better mitigate against climate change, it is imperative that ecosystem scientists understand how microbes decompose organic carbon in the soil and thereby release it as carbon dioxide into the atmosphere. A major challenge is the high variability across ecosystems in microbial biomass and in the environmental factors like temperature that drive their activity. In this paper, we use math to better understand how this variability impacts carbon dioxide release over large scales.
Andrew H. MacDougall
Biogeosciences, 18, 4937–4952, https://doi.org/10.5194/bg-18-4937-2021, https://doi.org/10.5194/bg-18-4937-2021, 2021
Short summary
Short summary
Permafrost soils hold about twice as much carbon as the atmosphere. As the Earth warms the organic matter in these soils will decay, releasing CO2 and CH4. It is expected that these soils will continue to release carbon to the atmosphere long after man-made emissions of greenhouse gases cease. Here we use a method employing hundreds of slightly varying model versions to estimate how much warming permafrost carbon will cause after human emissions of CO2 end.
Wei Zhang, Zhisheng Yao, Siqi Li, Xunhua Zheng, Han Zhang, Lei Ma, Kai Wang, Rui Wang, Chunyan Liu, Shenghui Han, Jia Deng, and Yong Li
Biogeosciences, 18, 4211–4225, https://doi.org/10.5194/bg-18-4211-2021, https://doi.org/10.5194/bg-18-4211-2021, 2021
Short summary
Short summary
The hydro-biogeochemical model Catchment Nutrient Management Model – DeNitrification-DeComposition (CNMM-DNDC) is improved by incorporating a soil thermal module to simulate the soil thermal regime in the presence of freeze–thaw cycles. The modified model is validated at a seasonally frozen catchment with typical alpine ecosystems (wetland, meadow and forest). The simulated aggregate emissions of methane and nitrous oxide are highest for the wetland, which is dominated by the methane emissions.
Sian Kou-Giesbrecht, Sergey Malyshev, Isabel Martínez Cano, Stephen W. Pacala, Elena Shevliakova, Thomas A. Bytnerowicz, and Duncan N. L. Menge
Biogeosciences, 18, 4143–4183, https://doi.org/10.5194/bg-18-4143-2021, https://doi.org/10.5194/bg-18-4143-2021, 2021
Short summary
Short summary
Representing biological nitrogen fixation (BNF) is an important challenge for land models. We present a novel representation of BNF and updated nitrogen cycling in a land model. It includes a representation of asymbiotic BNF by soil microbes and the competitive dynamics between nitrogen-fixing and non-fixing plants. It improves estimations of major carbon and nitrogen pools and fluxes and their temporal dynamics in comparison to previous representations of BNF in land models.
Christopher R. Taylor, Victoria Janes-Bassett, Gareth K. Phoenix, Ben Keane, Iain P. Hartley, and Jessica A. C. Davies
Biogeosciences, 18, 4021–4037, https://doi.org/10.5194/bg-18-4021-2021, https://doi.org/10.5194/bg-18-4021-2021, 2021
Short summary
Short summary
We used experimental data to model two phosphorus-limited grasslands and investigated their response to nitrogen (N) deposition. Greater uptake of organic P facilitated a positive response to N deposition, stimulating growth and soil carbon storage. Where organic P access was less, N deposition exacerbated P demand and reduced plant C input to the soil. This caused more C to be released into the atmosphere than is taken in, reducing the climate-mitigation capacity of the modelled grassland.
Jonathan Barichivich, Philippe Peylin, Thomas Launois, Valerie Daux, Camille Risi, Jina Jeong, and Sebastiaan Luyssaert
Biogeosciences, 18, 3781–3803, https://doi.org/10.5194/bg-18-3781-2021, https://doi.org/10.5194/bg-18-3781-2021, 2021
Short summary
Short summary
The width and the chemical signals of tree rings have the potential to test and improve the physiological responses simulated by global land surface models, which are at the core of future climate projections. Here, we demonstrate the novel use of tree-ring width and carbon and oxygen stable isotopes to evaluate the representation of tree growth and physiology in a global land surface model at temporal scales beyond experimentation and direct observation.
Gesa Meyer, Elyn R. Humphreys, Joe R. Melton, Alex J. Cannon, and Peter M. Lafleur
Biogeosciences, 18, 3263–3283, https://doi.org/10.5194/bg-18-3263-2021, https://doi.org/10.5194/bg-18-3263-2021, 2021
Short summary
Short summary
Shrub and sedge plant functional types (PFTs) were incorporated in the land surface component of the Canadian Earth System Model to improve representation of Arctic tundra ecosystems. Evaluated against 14 years of non-winter measurements, the magnitude and seasonality of carbon dioxide and energy fluxes at a Canadian dwarf-shrub tundra site were better captured by the shrub PFTs than by previously used grass and tree PFTs. Model simulations showed the tundra site to be an annual net CO2 source.
Martina Franz and Sönke Zaehle
Biogeosciences, 18, 3219–3241, https://doi.org/10.5194/bg-18-3219-2021, https://doi.org/10.5194/bg-18-3219-2021, 2021
Short summary
Short summary
The combined effects of ozone and nitrogen deposition on the terrestrial carbon uptake and storage has been unclear. Our simulations, from 1850 to 2099, show that ozone-related damage considerably reduced gross primary production and carbon storage in the past. The growth-stimulating effect induced by nitrogen deposition is offset until the 2050s. Accounting for nitrogen deposition without considering ozone effects might lead to an overestimation of terrestrial carbon uptake and storage.
Fabienne Maignan, Camille Abadie, Marine Remaud, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Róisín Commane, Richard Wehr, J. Elliott Campbell, Sauveur Belviso, Stephen A. Montzka, Nina Raoult, Ulli Seibt, Yoichi P. Shiga, Nicolas Vuichard, Mary E. Whelan, and Philippe Peylin
Biogeosciences, 18, 2917–2955, https://doi.org/10.5194/bg-18-2917-2021, https://doi.org/10.5194/bg-18-2917-2021, 2021
Short summary
Short summary
The assimilation of carbonyl sulfide (COS) by continental vegetation has been proposed as a proxy for gross primary production (GPP). Using a land surface and a transport model, we compare a mechanistic representation of the plant COS uptake (Berry et al., 2013) to the classical leaf relative uptake (LRU) approach linking GPP and vegetation COS fluxes. We show that at high temporal resolutions a mechanistic approach is mandatory, but at large scales the LRU approach compares similarly.
Caroline A. Famiglietti, T. Luke Smallman, Paul A. Levine, Sophie Flack-Prain, Gregory R. Quetin, Victoria Meyer, Nicholas C. Parazoo, Stephanie G. Stettz, Yan Yang, Damien Bonal, A. Anthony Bloom, Mathew Williams, and Alexandra G. Konings
Biogeosciences, 18, 2727–2754, https://doi.org/10.5194/bg-18-2727-2021, https://doi.org/10.5194/bg-18-2727-2021, 2021
Short summary
Short summary
Model uncertainty dominates the spread in terrestrial carbon cycle predictions. Efforts to reduce it typically involve adding processes, thereby increasing model complexity. However, if and how model performance scales with complexity is unclear. Using a suite of 16 structurally distinct carbon cycle models, we find that increased complexity only improves skill if parameters are adequately informed. Otherwise, it can degrade skill, and an intermediate-complexity model is optimal.
Gilvan Sampaio, Marília H. Shimizu, Carlos A. Guimarães-Júnior, Felipe Alexandre, Marcelo Guatura, Manoel Cardoso, Tomas F. Domingues, Anja Rammig, Celso von Randow, Luiz F. C. Rezende, and David M. Lapola
Biogeosciences, 18, 2511–2525, https://doi.org/10.5194/bg-18-2511-2021, https://doi.org/10.5194/bg-18-2511-2021, 2021
Short summary
Short summary
The impact of large-scale deforestation and the physiological effects of elevated atmospheric CO2 on Amazon rainfall are systematically compared in this study. Our results are remarkable in showing that the two disturbances cause equivalent rainfall decrease, though through different causal mechanisms. These results highlight the importance of not only curbing regional deforestation but also reducing global CO2 emissions to avoid climatic changes in the Amazon.
Daniele Peano, Deborah Hemming, Stefano Materia, Christine Delire, Yuanchao Fan, Emilie Joetzjer, Hanna Lee, Julia E. M. S. Nabel, Taejin Park, Philippe Peylin, David Wårlind, Andy Wiltshire, and Sönke Zaehle
Biogeosciences, 18, 2405–2428, https://doi.org/10.5194/bg-18-2405-2021, https://doi.org/10.5194/bg-18-2405-2021, 2021
Short summary
Short summary
Global climate models are the scientist’s tools used for studying past, present, and future climate conditions. This work examines the ability of a group of our tools in reproducing and capturing the right timing and length of the season when plants show their green leaves. This season, indeed, is fundamental for CO2 exchanges between land, atmosphere, and climate. This work shows that discrepancies compared to observations remain, demanding further polishing of these tools.
Karun Pandit, Hamid Dashti, Andrew T. Hudak, Nancy F. Glenn, Alejandro N. Flores, and Douglas J. Shinneman
Biogeosciences, 18, 2027–2045, https://doi.org/10.5194/bg-18-2027-2021, https://doi.org/10.5194/bg-18-2027-2021, 2021
Short summary
Short summary
A dynamic global vegetation model, Ecosystem Demography (EDv2.2), is used to understand spatiotemporal dynamics of a semi-arid shrub ecosystem under alternative fire regimes. Multi-decadal point simulations suggest shrub dominance for a non-fire scenario and a contrasting phase of shrub and C3 grass growth for a fire scenario. Regional gross primary productivity (GPP) simulations indicate moderate agreement with MODIS GPP and a GPP reduction in fire-affected areas before showing some recovery.
Martina Botter, Matthias Zeeman, Paolo Burlando, and Simone Fatichi
Biogeosciences, 18, 1917–1939, https://doi.org/10.5194/bg-18-1917-2021, https://doi.org/10.5194/bg-18-1917-2021, 2021
Carlos A. Sierra, Susan E. Crow, Martin Heimann, Holger Metzler, and Ernst-Detlef Schulze
Biogeosciences, 18, 1029–1048, https://doi.org/10.5194/bg-18-1029-2021, https://doi.org/10.5194/bg-18-1029-2021, 2021
Short summary
Short summary
The climate benefit of carbon sequestration (CBS) is a metric developed to quantify avoided warming by two separate processes: the amount of carbon drawdown from the atmosphere and the time this carbon is stored in a reservoir. This metric can be useful for quantifying the role of forests and soils for climate change mitigation and to better quantify the benefits of carbon removals by sinks.
Xiaoying Shi, Daniel M. Ricciuto, Peter E. Thornton, Xiaofeng Xu, Fengming Yuan, Richard J. Norby, Anthony P. Walker, Jeffrey M. Warren, Jiafu Mao, Paul J. Hanson, Lin Meng, David Weston, and Natalie A. Griffiths
Biogeosciences, 18, 467–486, https://doi.org/10.5194/bg-18-467-2021, https://doi.org/10.5194/bg-18-467-2021, 2021
Short summary
Short summary
The Sphagnum mosses are the important species of a wetland ecosystem. To better represent the peatland ecosystem, we introduced the moss species to the land model component (ELM) of the Energy Exascale Earth System Model (E3SM) by developing water content dynamics and nonvascular photosynthetic processes for moss. We tested the model against field observations and used the model to make projections of the site's carbon cycle under warming and atmospheric CO2 concentration scenarios.
Peter Horvath, Hui Tang, Rune Halvorsen, Frode Stordal, Lena Merete Tallaksen, Terje Koren Berntsen, and Anders Bryn
Biogeosciences, 18, 95–112, https://doi.org/10.5194/bg-18-95-2021, https://doi.org/10.5194/bg-18-95-2021, 2021
Short summary
Short summary
We evaluated the performance of three methods for representing vegetation cover. Remote sensing provided the best match to a reference dataset, closely followed by distribution modelling (DM), whereas the dynamic global vegetation model (DGVM) in CLM4.5BGCDV deviated strongly from the reference. Sensitivity tests show that use of threshold values for predictors identified by DM may improve DGVM performance. The results highlight the potential of using DM in the development of DGVMs.
Johan Arnqvist, Julia Freier, and Ebba Dellwik
Biogeosciences, 17, 5939–5952, https://doi.org/10.5194/bg-17-5939-2020, https://doi.org/10.5194/bg-17-5939-2020, 2020
Short summary
Short summary
Data generated by airborne laser scans enable the characterization of surface vegetation for any application that might need it, such as forest management, modeling for numerical weather prediction, or wind energy estimation. In this work we present a new algorithm for calculating the vegetation density using data from airborne laser scans. The new routine is more robust than earlier methods, and an implementation in popular programming languages accompanies the article to support new users.
Cited articles
Aasen, H., Van Wittenberghe, S., Medina, N. S., Damm, A., Goulas, Y., Wieneke, S., Hueni, A., Malenovsky, Z., Alonso, L, Pacheco-Labrador, J., and Cendrero-Mateo, M. P.:
Sun-induced chlorophyll fluorescence II: Review of passive measurement setups, protocols, and their application at the leaf to canopy level,
Remote Sensing,
11, 927, https://doi.org/10.3390/rs11080927, 2019.
Anav, A., Friedlingstein, P., Beer, C., Ciais, P., Harper, A., Jones, C., Murray-Tortarola, G., Papale, D., Parazoo, N. C., Peylin, P., and Piao, S.:
Spatiotemporal patterns of terrestrial gross primary production: A review,
Rev. Geophys.,
53, 785–818, https://doi.org/10.1002/2015RG000483, 2015.
Albert, L. P., Keenan, T. F., Burns, S. P., Huxman, T. E., and Monson, R. K.:
Climate controls over ecosystem metabolism: insights from a fifteen-year inductive artificial neural network synthesis for a subalpine forest,
Oecologia,
184, 25–41, https://doi.org/10.1007/s00442-017-3853-0, 2017.
Bacour, C., Maignan, F., MacBean, N., Porcar-Castell, A., Flexas, J., Frankenberg, C., Peylin, P., Chevallier, F., Vuichard, N., and Bastrikov, V.:
Improving estimates of Gross Primary Productivity by assimilating solar-induced fluorescence satellite retrievals in a terrestrial biosphere model using a process-based SIF model,
J. Geophys. Res.-Biogeo.,
124, 3281–3306, 2019.
Badgley, G., Field, C. B., and Berry, J. A.: Canopy near-infrared reflectance and terrestrial photosynthesis, Sci. Adv., 3, 1–6, https://doi.org/10.1126/sciadv.1602244, 2017.
Baker, I. T., Denning, A. S., Hanan, N., Prihodko, L., Vidale, P.-L., Davis, K., and Bakwin, P.:
Simulated and observed fluxes of sensible and latent heat and CO2 at the WLEF-TV Tower using SiB2.5,
Glob. Change Biol.,
9, 1262–1277, 2003.
Baker, I. T., Prihodko, L., Denning, A. S., Goulden, M., Milller, S., and da Rocha, H.:
Seasonal Drought Stress in the Amazon: Reconciling Models and Observations,
J. Geophys. Res.,
113, G00B01, https://doi.org/10.1029/2007JG000644, 2008.
Ball, J. T., Woodrow, I. E., and Berry, J. A.: A model predicting stomatal conductance and its contribution to the control of photosynthesis under different environmental conditions, in: Progress in photosynthesis research, Springer, Providence, Rhode Island, USA, 221–224, 1987.
Burns, S. P., Blanken, P. D., Turnipseed, A. A., Hu, J., and Monson, R. K.: The influence of warm-season precipitation on the diel cycle of the surface energy balance and carbon dioxide at a Colorado subalpine forest site, Biogeosciences, 12, 7349–7377, https://doi.org/10.5194/bg-12-7349-2015, 2015.
Burns, S. P., Swenson, S. C., Wieder, W. R., Lawrence, D. M., Bonan, G. B., Knowles, J. F., and Blanken, P. D.:
A comparison of the diel cycle of modeled and measured latent heat flux during the warm season in a Colorado subalpine forest,
J. Adv. Model. Earth Sy.,
10, 617–651, 2018.
Chen, J. M., Liu, J., Cihlar, J., and Goulden, M. L.:
Daily canopy photosynthesis model through temporal and spatial scaling for remote sensing applications,
Ecol. Model.,
124, 99–119, 1999.
Cogliati, S., Rossini, M., Julitta, T., Meroni, M., Schickling, A., Burkart, A., Pinto, F., Rascher, U., and Colombo, R.: Continuous and long-term measurements of reflectance and sun-induced chlorophyll fluorescence by using novel automated field spectroscopy systems, Remote Sens. Environ., 164, 270–281, https://doi.org/10.1016/j.rse.2015.03.027, 2015.
Collatz, G., Ball, J., Grivet, C., and Berry, J. A.: Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes a laminar boundary layer, Agr. Forest Meteorol., 54, 107–136, https://doi.org/10.1016/0168-1923(91)90002-8, 1991.
Collatz, G. J., Ribas-Carbo, M., and Berry, J.: Coupled photosynthesis-stomatal conductance model for leaves of C4 plants, Funct. Plant Biol., 19, 519–538, 1992.
Daumard, F., Champagne, S., Fournier, A., Goulas, Y., Ounis, A., Hanocq, J. F., and Moya, I.: A field platform for continuous measurement of canopy fluorescence, IEEE T. Geosci. Remote Sens., 48, 3358–3368, https://doi.org/10.1109/TGRS.2010.2046420, 2010.
Dechant,B., Ryu, Y., Badgley, G., Zeng, Y., Berry, J. A., Zhang, Y., Goulas, Y., Li, Z., Zhang, Q., Kang, M., Li, J., and Moya, I.:
Canopy structure explains the relationship between photosynthesis and sun-induced chlorophyll fluorescence in crops,
Remote Sens. Environ.,
241, 111733, https://doi.org/10.1016/j.rse.2020.111733, 2020.
Demmig-Adams, B. and Adams, W. W.: Photoprotection in an ecological context: The remarkable complexity of thermal energy dissipation, New Phytol., 172, 11–21, https://doi.org/10.1111/j.1469-8137.2006.01835.x, 2006.
Demmig-Adams, B., Cohu, C. M., Muller, O., and Adams, W. W.:
Modulation of photosynthetic energy conversion efficiency in nature: from seconds to seasons,
Photosynth. Res.,
113, 75–88, https://doi.org/10.1007/s11120-012-9761-6, 2012.
Dufresne, J.-L., Foujols, M.-A., Denvil, S., Caubel, A., Marti, O., Aumont, O., Balkanski, Y., Bekki, S., Bellenger, H., Benshila, R., and Bony, S.:
Climate change projections using the IPSL-CM5 Earth System Model: from CMIP3 to CMIP5,
Clim. Dynam.,
40, 2123–2165, 2013.
Eller, C. B., Rowland, L., Mencuccini, M., Rosas, T., Williams, K., Harper, A., Medlyn, B. E., Wagner, Y., Klein, T., Teodoro, G. S., and Oliveira, R. S.:
Stomatal optimisation based on xylem hydraulics (SOX) improves land surface model simulation of vegetation responses to climate,
New Phytol.,
226, 1622–1637, 2020.
Farquhar, G. V., von Caemmerer, S. V., and Berry, J.: A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species, Planta, 149, 78–90, 1980.
Flexas, J., Escalona, J. M., Evain, S., Gulías, J., Moya, I., Osmond, C. B., and Medrano, H.:
Steady-state chlorophyll fluorescence (Fs) measurements as a tool to follow variations of net CO2 assimilation and stomatal conductance during water-stress in C3 plants,
Physiol. Plantarum,
114, 231–240, https://doi.org/10.1034/j.1399-3054.2002.1140209.x, 2002.
Friedlingstein, P., Meinshausen, M., Arora, V. K., Jones, C. D., Anav, A., Liddicoat, S. K., and Knutti, R.:
Uncertainties in CMIP5 climate projections due to carbon cycle feedbacks,
J. Climate,
27, 511–526, 2014.
Galmés, J., Flexas, J., Savé, R., and Medrano, H.:
Water relations and stomatal characteristics of Mediterranean plants with different growth forms and leaf habits: responses to water stress and recovery,
Plant Soil,
290, 139–155, 2007.
Genty, B., Briantais, J.-M., and Baker, N. R.: The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence, Biochimica et Biophysica Acta (BBA) - General Subjects, 990, 87–92, https://doi.org/10.1016/S0304-4165(89)80016-9, 1989.
Grossmann, K., Frankenberg, C., Magney, T. S., Hurlock, S. C., Seibt, U., and Stutz, J.:
PhotoSpec: A new instrument to measure spatially distributed red and far-red Solar-Induced Chlorophyll Fluorescence,
Remote Sens. Environ.,
216, 311–327, https://doi.org/10.1016/j.rse.2018.07.002, 2018.
Gu, L., Han, J., Wood, J. D., Chang, C. Y., and Sun, Y.:
Sun-induced Chl fluorescence and its importance for biophysical modeling of photosynthesis based on light reactions,
New Phytol.,
223, 1179–1191, https://doi.org/10.1111/nph.15796, 2019a.
Gu, L., Wood, J. D., Chang, C. Y. Y., Sun, Y., and Riggs, J. S.:
Advancing Terrestrial Ecosystem Science With a Novel Automated Measurement System for Sun-Induced Chlorophyll Fluorescence for Integration With Eddy Covariance Flux Networks,
J. Geophys. Res.-Biogeo.,
124, 127–146, https://doi.org/10.1029/2018JG004742, 2019b.
Haynes, K., Baker, I. T., Denning, S., Stöckli, R., Schaefer, K., Lokupitiya, E. Y., and Haynes, J. M.:
Representing grasslands using dynamic prognostic phenology based on biological growth stages: 1. Implementation in the Simple Biosphere Model (SiB4),
J. Adv. Model. Earth Sy.,
11, 4423–4439, https://doi.org/10.1029/2018MS001540, 2019a.
Haynes, K. D., Baker, I. T.,Denning, A. S., Wolf, S., Wohlfahrt, G., Kiely, G., Minaya, R. C., and Haynes, J. M.:
Representing grasslands using dynamic prognostic phenology based on biological growth stages: 2. Carbon cycling,
J. Adv. Model. Earth Sy.,
11, 4440–4465, https://doi.org/10.1029/2018MS001541, 2019b.
Hu, J., Moore, D. J. P., Burns, S. P., and Monson, R. K.: Longer growing seasons lead to less carbon sequestration by a subalpine forest, Glob. Change Biol., 16, 771–783, doi:10.1111/j.1365-2486.2009.01967.x, 2010.
Julitta, T., Burkart, A., Colombo, R., Rossini, M., Schickling, A., Migliavacca, M., Cogliati, S., Wutzler, T., and Rascher, U.:
Accurate measurements of fluorescence in the O2A and O2B band using the FloX spectroscopy system – results and prospects,
in: Proc. Potsdam GHG Flux Workshop: From Photosystems to Ecosystems, 24–26 October 2017, Potsdam, Germany, https://www.potsdam-flux-workshop.eu/ (last access: 7 January 2019), 2017
Kaminski, T., Knorr, W., Schürmann, G., Scholze, M., Rayner, P. J., Zaehle, S., Blessing, S., Dorigo, W., Gayler, V., Giering, R., and Gobron, N.:
The BETHY/JSBACH carbon cycle data assimilation system: Experiences and challenges,
J. Geophys. Res.-Biogeo.,
118, 1414–1426, 2013.
Kennedy, D., Swenson, S., Oleson, K. W., Lawrence, D. M., Fisher, R., Lola da Costa, A. C., and Gentine, P.:
Implementing plant hydraulics in the community land model, version 5,
J. Adv. Model. Earth Sy.,
11, 485–513, 2019.
Koffi, E. N., Rayner, P. J., Scholze, M., and Beer, C.:
Atmospheric constraints on gross primary productivity and net ecosystem productivity: Results from a carbon-cycle data assimilation system,
Global Biogeochem. Cy.,
26, https://doi.org/10.1029/2010GB003900, 2012.
Koffi, E. N., Rayner, P. J., Norton, A. J., Frankenberg, C., and Scholze, M.: Investigating the usefulness of satellite-derived fluorescence data in inferring gross primary productivity within the carbon cycle data assimilation system, Biogeosciences, 12, 4067–4084, https://doi.org/10.5194/bg-12-4067-2015, 2015.
Krinner, G., Viovy, N., de Noblet-Ducoudré, N., Ogée, J., Polcher, J., Friedlingstein, P., Ciais, P., Sitch, S., and Prentice, I. C.:
A dynamic global vegetation model for studies of the coupled atmosphere-biosphere system,
Global Biogeochem. Cy.,
19, https://doi.org/10.1029/2003GB002199, 2005.
Köhler, P., Guanter, L., Kobayashi, H., Walther, S., and Yang, W.: Assessing the potential of sun-induced fluorescence and the canopy scattering coefficient to track large-scale vegetation dynamics in Amazon forests, Remote Sens. Environ., 204, 769–785, https://doi.org/10.1016/j.rse.2017.09.025, 2018.
Lasslop, G., Reichstein, M., Papale, D., Richardson, A., Arneth, A., Barr, A., Stoy, P., and Wohlfahrt, G.: Separation of net ecosystem exchange into assimilation and respiration using a light response curve approach: Critical issues and global evaluation, Glob. Change Biol., 16, 187–208, https://doi.org/10.1111/j.1365-2486.2009.02041.x, 2010.
Lawrence, D. M., Fisher, R. A., Koven, C. D., Oleson, K. W., Swenson, S. C., Bonan, G., Collier, N., Ghimire, B., van Kampenhout, L., Kennedy, D., and Kluzek, E.: The Community Land Model Version 5: Description of New Features, Benchmarking, and Impact of Forcing Uncertainty, J. Adv. Model. Earth Syst., 11, 4245–4287, https://doi.org/10.1029/2018MS001583, 2019.
Lee, J.-E., Berry, J. A., van der Tol, C., Yang, X., Guanter, L., Damm, A., Baker, I., and Frankenberg, C.:
Simulations of chlorophyll fluorescence incorporated into the Community Land Model version 4,
Glob. Change Biol.,
21, 3469–3477, 2015.
Leuning R.:
A critical appraisal of a combined stomatal-photosynthesis model for C3 plants,
Plant Cell Environ.,
18, 339–357, 1995.
Leuning, R., Francis, M., Kelliher, D. G., De Pury, G., and Schulze, E.-D.: Leaf nitrogen, photosynthesis, conductance and transpiration: scaling from leaves to canopies, Plant Cell Environ., 18, 1183–1200, 1995.
Li, Z., Zhang, Q., Li, J., Yang, X., Wu, Y., Zhang, Z., Wang, S., Wang, H., and Zhang, Y.:
Solar-induced chlorophyll fluorescence and its link to canopy photosynthesis in maize from continuous ground measurements,
Remote Sens. Environ.,
236, 111420, https://doi.org/10.1016/j.rse.2019.111420, 2020.
Liu, J., Chen, J. M., and Cihlar, J.:
Mapping evapotranspiration based on remote sensing: An application to Canada's landmass,
Water Resour. Res.,
39, https://doi.org/10.1029/2002WR001680, 2003.
Magney, T. S., Frankenberg, C., Fisher, J. B., Sun, Y., North, G. B., and Davis, T. S.:
Connecting active to passive fluorescence with photosynthesis?: a method for evaluating remote sensing measurements of Chl fluorescence,
New Phytol.,
215, 1594–1608, https://doi.org/10.1111/nph.14662, 2017.
Magney, T. S., Frankenberg, C., Köhler, P., North, G., Davis, T. S., Dold, C., Dutta, D., Fisher, J. B., Grossmann, K., Harrington, A., and Hatfield, J.:
Disentangling Changes in the Spectral Shape of Chlorophyll Fluorescence: Implications for Remote Sensing of Photosynthesis,
J. Geophys. Res.-Biogeo.,
124, 1491–1507, https://doi.org/10.1029/2019JG005029, 2019a.
Magney, T. S., Bowling, D. R., Logan, B., Grossmann, K., Stutz, J., and Blanken, P.:
Mechanistic evidence for tracking the seasonality of photosynthesis with solar-induced fluorescence,
P. Natl. Acad. Sci. USA,
116, 11640–11645, https://doi.org/10.1073/pnas.1900278116, 2019b.
Magney, T., Frankenberg, C., Grossmann, K., Bowling, D., Logan, B., Burns, S., and Stutz, J.:
Canopy and needle scale fluorescence data from Niwot Ridge, Colorado 2017–2018 (Version 1.1) [Data set], CaltechDATA, CalTech,
Pasadena, CA, USA,
https://doi.org/10.22002/d1.1231, 2019c.
Medlyn, B. E., Duursma, R. A., Eamus, D., Ellsworth, D. S., Prentice, I. C., Barton, C. V. M., Crous, K. Y., De Angelis, P., Freeman, M., and Wingate, L.:
Reconciling the optimal and empirical approaches to modelling stomatal conductance,
Glob. Change Biol.,
17, 2134–2144, https://doi.org/10.1111/j.1365-2486.2010.02375.x, 2011.
Miao, G., Guan, K., Yang, X., Bernacchi, C. J., Berry, J. A., DeLucia, E. H., Wu, J., Moore, C. E., Meacham, K., Cai, Y., and Peng, P.: Sun-Induced Chlorophyll Fluorescence, Photosynthesis, and Light Use Efficiency of a Soybean Field from Seasonally Continuous Measurements, J. Geophys. Res.-Biogeo., 123, 610–623, https://doi.org/10.1002/2017JG004180, 2018.
Miguez, F., Fernández-Marin, B., Becerril, J. M., and Garcia-Plazaola, J. I.:
Activation of photoprotective winter photoinhibition in plants from different environments: a literature compilation and meta-analysis,
Physiol. Plantarum,
155, 414–423, 2015.
Migliavacca, M., Perez-Priego, O., Rossini, M., El-Madany, T. S., Moreno, G., van der Tol, C., Rascher, U., Berninger, A., Bessenbacher, V., Burkart, A., and Carrara, A.: Plant functional traits and canopy structure control the relationship between photosynthetic CO2 uptake and far-red sun-induced fluorescence in a Mediterranean grassland under different nutrient availability, New Phytol., 214, 1078–1091, 2017.
Mohammed, G. H., Colombo, R., Middleton, E. M., Rascher, U., van der Tol, C., Nedbal, L., Goulan, Y., Perez-Priego, O., Damm, A., Meroni, M. and Joiner, J.:
Remote sensing of solar-induced chlorophyll fluorescence (SIF) in vegetation: 50 years of progress,
Remote Sens. Environ.,
231, 111177, https://doi.org/10.1016/j.rse.2019.04.030, 2019.
Monson, R. K., Turnipseed, A. A., Sparks, J. P., Harley, P. C., Scott-Denton, L. E., Sparks, K., and Huxman, T. E.: Carbon sequestration in a high-elevation, subalpine forest, Glob. Change Biol., 8, 459–478, 2002.
Monteith, J. L.:
Solar Radiation and Productivity in Tropical Ecosystems,
J. Appl. Ecol.,
9, 747–766, https://doi.org/10.2307/2401901, 1972.
Norton, A. J., Rayner, P. J., Koffi, E. N., and Scholze, M.: Assimilating solar-induced chlorophyll fluorescence into the terrestrial biosphere model BETHY-SCOPE v1.0: model description and information content, Geosci. Model Dev., 11, 1517–1536, https://doi.org/10.5194/gmd-11-1517-2018, 2018.
Norton, A. J., Rayner, P. J., Koffi, E. N., Scholze, M., Silver, J. D., and Wang, Y.-P.: Estimating global gross primary productivity using chlorophyll fluorescence and a data assimilation system with the BETHY-SCOPE model, Biogeosciences, 16, 3069–3093, https://doi.org/10.5194/bg-16-3069-2019, 2019.
Parazoo, N. C., Frankenberg, C., Köhler, P., Joiner, J., Yoshida, Y., Magney, T., Sun, Y., and Yadav, V.: Towards a Harmonized Long‐Term Spaceborne Record of Far‐Red Solar‐Induced Fluorescence, J. Geophys. Res.-Biogeo., 1–22, https://doi.org/10.1029/2019JG005289, 2019.
Porcar-Castell, A.:
A high-resolution portrait of the annual dynamics of photochemical and non-photochemical quenching in needles of Pinus sylvestris,
Physiol. Plantarum,
143, 139–153, https://doi.org/10.1111/j.1399-3054.2011.01488.x, 2011.
Porcar-Castell, A., Tyystjärvi, E., Atherton, J., Van Der Tol, C., Flexas, J., Pfündel, E. E., Moreno, J., Frankenberg, C., and Berry, J. A.: Linking chlorophyll a fluorescence to photosynthesis for remote sensing applications: Mechanisms and challenges, J. Exp. Bot., 65, 4065–4095, https://doi.org/10.1093/jxb/eru191, 2014.
Qiu, B., Chen, J. M., Ju, W., Zhang, Q., and Zhang, Y.:
Simulating emission and scattering of solar-induced chlorophyll fluorescence at far-red band in global vegetation with different canopy structures,
Remote Sens. Environ.,
233, 111373, https://doi.org/10.1016/j.rse.2019.111373, 2019.
Raczka, B., Duarte, H. F., Koven, C. D., Ricciuto, D., Thornton, P. E., Lin, J. C., and Bowling, D. R.: An observational constraint on stomatal function in forests: evaluating coupled carbon and water vapor exchange with carbon isotopes in the Community Land Model (CLM4.5), Biogeosciences, 13, 5183–5204, https://doi.org/10.5194/bg-13-5183-2016, 2016.
Raczka, B., Porcar-Castell, A., Magney, T., Lee, J. E., Köhler, P., Frankenberg, C., Grossman, K., Logan, B. A., Stutz, J., Blanken, P. D., Burns, S. P., Duarte, H., Yang, X., Lin, J. C., and Bowling, D. R.:
Sustained nonphotochemical quenching shapes the seasonal pattern of solar-induced fluorescence at a high-elevation evergreen forest,
J. Geophys. Res.-Biogeo.,
124, 2005–2020, https://doi.org/10.1029/2018JG004883, 2019.
Rayner, P. J., Scholze, M., Knorr, W., Kaminski, T., Giering, R., and Widmann, H.:
Two decades of terrestrial carbon fluxes from a carbon cycle data assimilation system (CCDAS),
Global Biogeochem. Cy.,
19, https://doi.org/10.1029/2004GB002254, 2005.
Reichstein, M., Falge, E., Baldocchi, D., Papale, D., Aubinet, M., Berbigier, P., Bernhofer, C., Buchmann, N., Gilmanov, T., Granier, A., and Grunwald, T.: On the separation of net ecosystem exchange into assimilation and ecosystem respiration: Review and improved algorithm, Glob. Change Biol.,, 11, 1424–1439, https://doi.org/10.1111/j.1365-2486.2005.001002.x, 2005.
Schreiber, U., Schliwa, U., and Bilger, W.:
Continuous recording of photochemical and non-photochemical chlorophyll fluorescence quenching with a new type of modulation fluorometer,
Photosynth. Res.,
10, 51–62, 1986.
Sellers, P. J., Randall, D. A., Collatz, G. J., Berry, J. A., Field, C. B., Dazlich, D. A., Zhang, C., Collelo, G. D., and Bounoua, L.:
A revised land surface parameterization (SiB2) for atmospheric GCMs. Part I: Model formulation,
J. Climate,
9, 676–70, 1996.
Shan, N., Ju, W., Migliavacca, M., Martini, D., Guanter, L., Chen, J., Goulas, Y., and Zhang, Y.:
Modeling canopy conductance and transpiration from solar-induced chlorophyll fluorescence,
Agr. Forest Meteorol.,
268, 189–201, 2019.
Sun, Y., Frankenberg, C., Wood, J. D., Schimel, D. S., Jung, M., Guanter, L., Drewry, D. T., Verma, M., Porcar-Castell, A., Griffis, T. J., and Gu, L.: OCO-2 advances photosynthesis observation from space via solar-induced chlorophyll fluorescence, Science, 358, https://doi.org/10.1126/science.aam5747, 2017.
Sperry, J. S. and Love, D. M.: What plant hydraulics can tell us about responses to climate-change droughts, New Phytol., 207, 14–27, https://doi.org/10.1111/nph.13354, 2015.
Svishnikov, D., Ensminger, I., Ivanov, A. G., Campbell, D., Lloyd, J., Funk, C., Huner, N. P. A., and Oquist, G.:
Excitation energy partitioning and quenching during cold acclimation in Scots pine,
Tree Physiol.,
26, 325–336, 2006.
Thum, T., Zaehle, S., Köhler, P., Aalto, T., Aurela, M., Guanter, L., Kolari, P., Laurila, T., Lohila, A., Magnani, F., Van Der Tol, C., and Markkanen, T.: Modelling sun-induced fluorescence and photosynthesis with a land surface model at local and regional scales in northern Europe, Biogeosciences, 14, 1969–1987, https://doi.org/10.5194/bg-14-1969-2017, 2017.
van der Tol, C., Verhoef, W., Timmermans, J., Verhoef, A., and Su, Z.: An integrated model of soil-canopy spectral radiances, photosynthesis, fluorescence, temperature and energy balance, Biogeosciences, 6, 3109–3129, https://doi.org/10.5194/bg-6-3109-2009, 2009.
van der Tol, C., Verhoef, W., and Rosema, A.: A model for chlorophyll fluorescence and photosynthesis at leaf scale, Agr. Forest Meteorol., 149, 96–105, https://doi.org/10.1016/j.agrformet.2008.07.007, 2009.
van der Tol, C., Berry, J. A., Campbell, P. K. E., and Rascher, U.:
Models of fluorescence and photosynthesis for interpreting measurements of solar-induced chlorophyll fluorescence,
J. Geophys. Res.-Biogeo.,
119, 2312–2327, https://doi.org/10.1002/2014JG002713, 2014.
Wohlfahrt, G., Gerdel, K., Migliavacca, M., Rotenberg, E., Tatarinov, F., Müller, J., Hammerle, A., Julitta, T., Spielmann, F. M., and Yakir, D.:
Sun-induced fluorescence and gross primary productivity during a heat wave,
Sci. Rep.-UK,
8, 1–9, 2018.
Yang, P. and van der Tol, C.:
Linking canopy scattering of far-red sun-induced chlorophyll fluorescence with reflectance,
Remote Sens. Environ.,
209, 456–467, https://doi.org/10.1016/j.rse.2018.02.029, 2018.
Yang, H., Yang, X., Zhang, Y., Heskel, M. A., Lu, X., Munger, J. W., Sun, S., and Tang, J.: Chlorophyll fluorescence tracks seasonal variations of photosynthesis from leaf to canopy in a temperate forest, Glob. Change Biol., 23, 2874–2886, https://doi.org/10.1111/gcb.13590, 2017.
Yang, X., Tang, J., Mustard, J. F., Lee, J.-E., Rossini, M., Joiner, J., Munger, J. W., Kornfeld, A., and Richardson, A. D.: Solar-induced chlorophyll fluorescence that correlates with canopy photosynthesis on diurnal and seasonal scales in a temperate deciduous forest, Geophys. Res. Lett., 42, 2977–2987, doi:10.1002/2015GL063201, 2015.
Yang, X., Shi, H., Stovall, A., Guan, K., Miao, G., Zhang, Y., Xiao, X., Ryu, Y., and Lee, J. E.: FluoSpec 2 – an automated field spectroscopy system to monitor canopy solar-induced fluorescence, Sensors (Switzerland), 18, https://doi.org/10.3390/s18072063, 2018.
Yin, X. and Struik, P. C.:
C3 and C4 photosynthesis models: an overview from the perspective of crop modelling,
NJAS-Wagen. J. Life Sc.,
57, 27–38, 2009.
Zeng, Y., Badgley, G., Dechant, B., Ryu, Y., Chen, M., and Berry, J. A.: A practical approach for estimating the escape ratio of near-infrared solar-induced chlorophyll fluorescence, Remote Sens. Environ., 232, 111209, https://doi.org/10.1016/j.rse.2019.05.028, 2019.
Zhang, Y., Guanter, L., Berry, J. A., van der Tol, C., Yang, X., Tang, J., and Zhang, F.:
Model-based analysis of the relationship between sun-induced chlorophyll fluorescence and gross primary production for remote sensing applications,
Remote Sens. Environ.,
187, 145–155, 2016.
Zhang, Q., Zhang, X., Li, Z., Wu, Y., and Zhang, Y:
Comparison of Bi-Hemispherical and Hemispherical-Conical Configurations for in situ Measurements of Solar-Induced Chlorophyll Fluorescence,
Remote Sensing,
11, 2642, 2019.
Short summary
Satellite measurements of solar-induced chlorophyll fluorescence (SIF) provide a global measure of photosynthetic change. This enables scientists to better track carbon cycle responses to environmental change and tune biochemical processes in vegetation models for an improved simulation of future change. We use tower-instrumented SIF measurements and controlled model experiments to assess the state of the art in terrestrial biosphere SIF modeling and find a wide range of sensitivities to light.
Satellite measurements of solar-induced chlorophyll fluorescence (SIF) provide a global measure...
Altmetrics
Final-revised paper
Preprint